data_4LJN # _entry.id 4LJN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4LJN RCSB RCSB080712 WWPDB D_1000080712 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2LN0 . unspecified PDB 4LLB . unspecified PDB 4LK9 . unspecified # _pdbx_database_status.entry_id 4LJN _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-07-05 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Dreveny, I.' 1 'Deeves, S.E.' 2 'Yue, B.' 3 'Heery, D.M.' 4 # _citation.id primary _citation.title ;The double PHD finger domain of MOZ/MYST3 induces alpha-helical structure of the histone H3 tail to facilitate acetylation and methylation sampling and modification. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 822 _citation.page_last 835 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24150941 _citation.pdbx_database_id_DOI 10.1093/nar/gkt931 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dreveny, I.' 1 primary 'Deeves, S.E.' 2 primary 'Fulton, J.' 3 primary 'Yue, B.' 4 primary 'Messmer, M.' 5 primary 'Bhattacharya, A.' 6 primary 'Collins, H.M.' 7 primary 'Heery, D.M.' 8 # _cell.length_a 64.685 _cell.length_b 64.685 _cell.length_c 64.804 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4LJN _cell.pdbx_unique_axis ? _cell.Z_PDB 6 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.entry_id 4LJN _symmetry.Int_Tables_number 152 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Histone acetyltransferase KAT6A' 15499.267 1 2.3.1.48 ? 'unp residues 194-323' ? 2 non-polymer syn 'ZINC ION' 65.409 4 ? ? ? ? 3 water nat water 18.015 6 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name ;MOZ, YBF2/SAS3, SAS2 and TIP60 protein 3, MYST-3, Monocytic leukemia zinc finger protein, Runt-related transcription factor-binding protein 2, Zinc finger protein 220 ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMLELPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSS CRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMLELPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSS CRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 LEU n 1 6 GLU n 1 7 LEU n 1 8 PRO n 1 9 HIS n 1 10 GLU n 1 11 LYS n 1 12 ASP n 1 13 LYS n 1 14 PRO n 1 15 VAL n 1 16 ALA n 1 17 GLU n 1 18 PRO n 1 19 ILE n 1 20 PRO n 1 21 ILE n 1 22 CYS n 1 23 SER n 1 24 PHE n 1 25 CYS n 1 26 LEU n 1 27 GLY n 1 28 THR n 1 29 LYS n 1 30 GLU n 1 31 GLN n 1 32 ASN n 1 33 ARG n 1 34 GLU n 1 35 LYS n 1 36 LYS n 1 37 PRO n 1 38 GLU n 1 39 GLU n 1 40 LEU n 1 41 ILE n 1 42 SER n 1 43 CYS n 1 44 ALA n 1 45 ASP n 1 46 CYS n 1 47 GLY n 1 48 ASN n 1 49 SER n 1 50 GLY n 1 51 HIS n 1 52 PRO n 1 53 SER n 1 54 CYS n 1 55 LEU n 1 56 LYS n 1 57 PHE n 1 58 SER n 1 59 PRO n 1 60 GLU n 1 61 LEU n 1 62 THR n 1 63 VAL n 1 64 ARG n 1 65 VAL n 1 66 LYS n 1 67 ALA n 1 68 LEU n 1 69 ARG n 1 70 TRP n 1 71 GLN n 1 72 CYS n 1 73 ILE n 1 74 GLU n 1 75 CYS n 1 76 LYS n 1 77 THR n 1 78 CYS n 1 79 SER n 1 80 SER n 1 81 CYS n 1 82 ARG n 1 83 ASP n 1 84 GLN n 1 85 GLY n 1 86 LYS n 1 87 ASN n 1 88 ALA n 1 89 ASP n 1 90 ASN n 1 91 MET n 1 92 LEU n 1 93 PHE n 1 94 CYS n 1 95 ASP n 1 96 SER n 1 97 CYS n 1 98 ASP n 1 99 ARG n 1 100 GLY n 1 101 PHE n 1 102 HIS n 1 103 MET n 1 104 GLU n 1 105 CYS n 1 106 CYS n 1 107 ASP n 1 108 PRO n 1 109 PRO n 1 110 LEU n 1 111 THR n 1 112 ARG n 1 113 MET n 1 114 PRO n 1 115 LYS n 1 116 GLY n 1 117 MET n 1 118 TRP n 1 119 ILE n 1 120 CYS n 1 121 GLN n 1 122 ILE n 1 123 CYS n 1 124 ARG n 1 125 PRO n 1 126 ARG n 1 127 LYS n 1 128 LYS n 1 129 GLY n 1 130 ARG n 1 131 LYS n 1 132 LEU n 1 133 LEU n 1 134 GLN n 1 135 LYS n 1 136 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'KAT6A, MOZ, MYST3, RUNXBP2, ZNF220' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta 2' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET15b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code KAT6A_HUMAN _struct_ref.pdbx_db_accession Q92794 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LPHEKDKPVAEPIPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLKFSPELTVRVKALRWQCIECKTCSSCRDQGK NADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRPRKKGRKLLQKK ; _struct_ref.pdbx_align_begin 194 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LJN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 7 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 136 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q92794 _struct_ref_seq.db_align_beg 194 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 323 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 194 _struct_ref_seq.pdbx_auth_seq_align_end 323 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LJN GLY A 1 ? UNP Q92794 ? ? 'EXPRESSION TAG' 188 1 1 4LJN SER A 2 ? UNP Q92794 ? ? 'EXPRESSION TAG' 189 2 1 4LJN HIS A 3 ? UNP Q92794 ? ? 'EXPRESSION TAG' 190 3 1 4LJN MET A 4 ? UNP Q92794 ? ? 'EXPRESSION TAG' 191 4 1 4LJN LEU A 5 ? UNP Q92794 ? ? 'EXPRESSION TAG' 192 5 1 4LJN GLU A 6 ? UNP Q92794 ? ? 'EXPRESSION TAG' 193 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 4LJN _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.53 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 51.29 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.pH 7 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.pdbx_details '60% tacsimate, pH 7, VAPOR DIFFUSION, temperature 293K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-07-04 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_wavelength_list 0.8726 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 # _reflns.entry_id 4LJN _reflns.d_resolution_high 3.000 _reflns.d_resolution_low 56.019 _reflns.number_all 3347 _reflns.number_obs 3347 _reflns.pdbx_netI_over_sigmaI 14.900 _reflns.pdbx_Rsym_value 0.074 _reflns.pdbx_redundancy 4.500 _reflns.percent_possible_obs 99.700 _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate 77.47 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 3.000 3.160 ? 2180 ? 0.709 1.000 0.709 ? 4.600 ? 470 99.300 1 1 3.160 3.350 ? 2112 ? 0.399 1.800 0.399 ? 4.700 ? 451 99.800 2 1 3.350 3.590 ? 1941 ? 0.208 3.400 0.208 ? 4.700 ? 417 99.700 3 1 3.590 3.870 ? 1831 ? 0.095 7.600 0.095 ? 4.600 ? 400 99.700 4 1 3.870 4.240 ? 1731 ? 0.063 11.600 0.063 ? 4.600 ? 379 99.900 5 1 4.240 4.740 ? 1475 ? 0.047 14.800 0.047 ? 4.500 ? 330 100.000 6 1 4.740 5.480 ? 1331 ? 0.047 12.600 0.047 ? 4.400 ? 303 99.900 7 1 5.480 6.710 ? 1109 ? 0.048 13.100 0.048 ? 4.300 ? 259 100.000 8 1 6.710 9.490 ? 878 ? 0.041 15.200 0.041 ? 4.200 ? 211 100.000 9 1 9.490 56.019 ? 464 ? 0.034 17.900 0.034 ? 3.700 ? 127 97.500 10 1 # _refine.entry_id 4LJN _refine.ls_d_res_high 3.0000 _refine.ls_d_res_low 56.0190 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 96.3500 _refine.ls_number_reflns_obs 3225 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2288 _refine.ls_R_factor_R_work 0.2276 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2425 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 6.7000 _refine.ls_number_reflns_R_free 216 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 84.4852 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.2900 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 'pdb entry 4LK9' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.7834 _refine.B_iso_max 130.690 _refine.B_iso_min 50.510 _refine.pdbx_overall_phase_error 27.0000 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 935 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 6 _refine_hist.number_atoms_total 945 _refine_hist.d_res_high 3.0000 _refine_hist.d_res_low 56.0190 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 971 0.010 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1282 1.087 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 135 0.098 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 168 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 380 13.283 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 3.0003 _refine_ls_shell.d_res_low 3.7800 _refine_ls_shell.pdbx_total_number_of_bins_used 2 _refine_ls_shell.percent_reflns_obs 93.0000 _refine_ls_shell.number_reflns_R_work 1426 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2818 _refine_ls_shell.R_factor_R_free 0.3007 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1518 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4LJN _struct.title 'Crystal Structure of MOZ double PHD finger' _struct.pdbx_descriptor 'Histone acetyltransferase KAT6A (E.C.2.3.1.48)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LJN _struct_keywords.text 'plant homeodomain finger, double PHD, Zinc Finger, histone acetyl transferase, Transferase' _struct_keywords.pdbx_keywords TRANSFERASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 7 ? ASP A 12 ? LEU A 194 ASP A 199 1 ? 6 HELX_P HELX_P2 2 SER A 58 ? ALA A 67 ? SER A 245 ALA A 254 1 ? 10 HELX_P HELX_P3 3 GLU A 104 ? CYS A 106 ? GLU A 291 CYS A 293 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 51 ND1 ? ? ? 1_555 D ZN . ZN ? ? A HIS 238 A ZN 403 1_555 ? ? ? ? ? ? ? 2.022 ? metalc2 metalc ? ? A HIS 102 ND1 ? ? ? 1_555 C ZN . ZN ? ? A HIS 289 A ZN 402 1_555 ? ? ? ? ? ? ? 2.045 ? metalc3 metalc ? ? A CYS 120 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 307 A ZN 401 1_555 ? ? ? ? ? ? ? 2.146 ? metalc4 metalc ? ? A CYS 75 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 262 A ZN 404 1_555 ? ? ? ? ? ? ? 2.171 ? metalc5 metalc ? ? A CYS 97 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 284 A ZN 401 1_555 ? ? ? ? ? ? ? 2.207 ? metalc6 metalc ? ? A CYS 94 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 281 A ZN 401 1_555 ? ? ? ? ? ? ? 2.234 ? metalc7 metalc ? ? A CYS 46 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 233 A ZN 404 1_555 ? ? ? ? ? ? ? 2.243 ? metalc8 metalc ? ? A CYS 105 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 292 A ZN 402 1_555 ? ? ? ? ? ? ? 2.243 ? metalc9 metalc ? ? A CYS 78 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 265 A ZN 402 1_555 ? ? ? ? ? ? ? 2.261 ? metalc10 metalc ? ? A CYS 72 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 259 A ZN 404 1_555 ? ? ? ? ? ? ? 2.288 ? metalc11 metalc ? ? A CYS 22 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 209 A ZN 403 1_555 ? ? ? ? ? ? ? 2.299 ? metalc12 metalc ? ? A CYS 43 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 230 A ZN 404 1_555 ? ? ? ? ? ? ? 2.313 ? metalc13 metalc ? ? A CYS 25 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 212 A ZN 403 1_555 ? ? ? ? ? ? ? 2.317 ? metalc14 metalc ? ? A CYS 54 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 241 A ZN 403 1_555 ? ? ? ? ? ? ? 2.339 ? metalc15 metalc ? ? A CYS 81 SG ? ? ? 1_555 C ZN . ZN ? ? A CYS 268 A ZN 402 1_555 ? ? ? ? ? ? ? 2.348 ? metalc16 metalc ? ? A CYS 123 SG ? ? ? 1_555 B ZN . ZN ? ? A CYS 310 A ZN 401 1_555 ? ? ? ? ? ? ? 2.353 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 107 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 294 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 108 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 295 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.01 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 41 ? SER A 42 ? ILE A 228 SER A 229 A 2 SER A 49 ? GLY A 50 ? SER A 236 GLY A 237 B 1 MET A 91 ? PHE A 93 ? MET A 278 PHE A 280 B 2 GLY A 100 ? HIS A 102 ? GLY A 287 HIS A 289 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 41 ? N ILE A 228 O GLY A 50 ? O GLY A 237 B 1 2 N LEU A 92 ? N LEU A 279 O PHE A 101 ? O PHE A 288 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 401' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 402' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 403' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 94 ? CYS A 281 . ? 1_555 ? 2 AC1 4 CYS A 97 ? CYS A 284 . ? 1_555 ? 3 AC1 4 CYS A 120 ? CYS A 307 . ? 1_555 ? 4 AC1 4 CYS A 123 ? CYS A 310 . ? 1_555 ? 5 AC2 4 CYS A 78 ? CYS A 265 . ? 1_555 ? 6 AC2 4 CYS A 81 ? CYS A 268 . ? 1_555 ? 7 AC2 4 HIS A 102 ? HIS A 289 . ? 1_555 ? 8 AC2 4 CYS A 105 ? CYS A 292 . ? 1_555 ? 9 AC3 4 CYS A 22 ? CYS A 209 . ? 1_555 ? 10 AC3 4 CYS A 25 ? CYS A 212 . ? 1_555 ? 11 AC3 4 HIS A 51 ? HIS A 238 . ? 1_555 ? 12 AC3 4 CYS A 54 ? CYS A 241 . ? 1_555 ? 13 AC4 4 CYS A 43 ? CYS A 230 . ? 1_555 ? 14 AC4 4 CYS A 46 ? CYS A 233 . ? 1_555 ? 15 AC4 4 CYS A 72 ? CYS A 259 . ? 1_555 ? 16 AC4 4 CYS A 75 ? CYS A 262 . ? 1_555 ? # _atom_sites.entry_id 4LJN _atom_sites.fract_transf_matrix[1][1] 0.015460 _atom_sites.fract_transf_matrix[1][2] 0.008926 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017851 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015431 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 188 ? ? ? A . n A 1 2 SER 2 189 ? ? ? A . n A 1 3 HIS 3 190 ? ? ? A . n A 1 4 MET 4 191 ? ? ? A . n A 1 5 LEU 5 192 ? ? ? A . n A 1 6 GLU 6 193 193 GLU GLU A . n A 1 7 LEU 7 194 194 LEU LEU A . n A 1 8 PRO 8 195 195 PRO PRO A . n A 1 9 HIS 9 196 196 HIS HIS A . n A 1 10 GLU 10 197 197 GLU GLU A . n A 1 11 LYS 11 198 198 LYS LYS A . n A 1 12 ASP 12 199 199 ASP ASP A . n A 1 13 LYS 13 200 200 LYS LYS A . n A 1 14 PRO 14 201 201 PRO PRO A . n A 1 15 VAL 15 202 202 VAL VAL A . n A 1 16 ALA 16 203 203 ALA ALA A . n A 1 17 GLU 17 204 204 GLU GLU A . n A 1 18 PRO 18 205 205 PRO PRO A . n A 1 19 ILE 19 206 206 ILE ILE A . n A 1 20 PRO 20 207 207 PRO PRO A . n A 1 21 ILE 21 208 208 ILE ILE A . n A 1 22 CYS 22 209 209 CYS CYS A . n A 1 23 SER 23 210 210 SER SER A . n A 1 24 PHE 24 211 211 PHE PHE A . n A 1 25 CYS 25 212 212 CYS CYS A . n A 1 26 LEU 26 213 213 LEU LEU A . n A 1 27 GLY 27 214 214 GLY GLY A . n A 1 28 THR 28 215 215 THR THR A . n A 1 29 LYS 29 216 216 LYS LYS A . n A 1 30 GLU 30 217 217 GLU GLU A . n A 1 31 GLN 31 218 218 GLN GLN A . n A 1 32 ASN 32 219 219 ASN ASN A . n A 1 33 ARG 33 220 220 ARG ARG A . n A 1 34 GLU 34 221 221 GLU GLU A . n A 1 35 LYS 35 222 222 LYS LYS A . n A 1 36 LYS 36 223 223 LYS LYS A . n A 1 37 PRO 37 224 224 PRO PRO A . n A 1 38 GLU 38 225 225 GLU GLU A . n A 1 39 GLU 39 226 226 GLU GLU A . n A 1 40 LEU 40 227 227 LEU LEU A . n A 1 41 ILE 41 228 228 ILE ILE A . n A 1 42 SER 42 229 229 SER SER A . n A 1 43 CYS 43 230 230 CYS CYS A . n A 1 44 ALA 44 231 231 ALA ALA A . n A 1 45 ASP 45 232 232 ASP ASP A . n A 1 46 CYS 46 233 233 CYS CYS A . n A 1 47 GLY 47 234 234 GLY GLY A . n A 1 48 ASN 48 235 235 ASN ASN A . n A 1 49 SER 49 236 236 SER SER A . n A 1 50 GLY 50 237 237 GLY GLY A . n A 1 51 HIS 51 238 238 HIS HIS A . n A 1 52 PRO 52 239 239 PRO PRO A . n A 1 53 SER 53 240 240 SER SER A . n A 1 54 CYS 54 241 241 CYS CYS A . n A 1 55 LEU 55 242 242 LEU LEU A . n A 1 56 LYS 56 243 243 LYS LYS A . n A 1 57 PHE 57 244 244 PHE PHE A . n A 1 58 SER 58 245 245 SER SER A . n A 1 59 PRO 59 246 246 PRO PRO A . n A 1 60 GLU 60 247 247 GLU GLU A . n A 1 61 LEU 61 248 248 LEU LEU A . n A 1 62 THR 62 249 249 THR THR A . n A 1 63 VAL 63 250 250 VAL VAL A . n A 1 64 ARG 64 251 251 ARG ARG A . n A 1 65 VAL 65 252 252 VAL VAL A . n A 1 66 LYS 66 253 253 LYS LYS A . n A 1 67 ALA 67 254 254 ALA ALA A . n A 1 68 LEU 68 255 255 LEU LEU A . n A 1 69 ARG 69 256 256 ARG ARG A . n A 1 70 TRP 70 257 257 TRP TRP A . n A 1 71 GLN 71 258 258 GLN GLN A . n A 1 72 CYS 72 259 259 CYS CYS A . n A 1 73 ILE 73 260 260 ILE ILE A . n A 1 74 GLU 74 261 261 GLU GLU A . n A 1 75 CYS 75 262 262 CYS CYS A . n A 1 76 LYS 76 263 263 LYS LYS A . n A 1 77 THR 77 264 264 THR THR A . n A 1 78 CYS 78 265 265 CYS CYS A . n A 1 79 SER 79 266 266 SER SER A . n A 1 80 SER 80 267 267 SER SER A . n A 1 81 CYS 81 268 268 CYS CYS A . n A 1 82 ARG 82 269 269 ARG ARG A . n A 1 83 ASP 83 270 ? ? ? A . n A 1 84 GLN 84 271 ? ? ? A . n A 1 85 GLY 85 272 ? ? ? A . n A 1 86 LYS 86 273 ? ? ? A . n A 1 87 ASN 87 274 274 ASN ALA A . n A 1 88 ALA 88 275 275 ALA ALA A . n A 1 89 ASP 89 276 276 ASP ASP A . n A 1 90 ASN 90 277 277 ASN ASN A . n A 1 91 MET 91 278 278 MET MET A . n A 1 92 LEU 92 279 279 LEU LEU A . n A 1 93 PHE 93 280 280 PHE PHE A . n A 1 94 CYS 94 281 281 CYS CYS A . n A 1 95 ASP 95 282 282 ASP ASP A . n A 1 96 SER 96 283 283 SER SER A . n A 1 97 CYS 97 284 284 CYS CYS A . n A 1 98 ASP 98 285 285 ASP ASP A . n A 1 99 ARG 99 286 286 ARG ARG A . n A 1 100 GLY 100 287 287 GLY GLY A . n A 1 101 PHE 101 288 288 PHE PHE A . n A 1 102 HIS 102 289 289 HIS HIS A . n A 1 103 MET 103 290 290 MET MET A . n A 1 104 GLU 104 291 291 GLU GLU A . n A 1 105 CYS 105 292 292 CYS CYS A . n A 1 106 CYS 106 293 293 CYS CYS A . n A 1 107 ASP 107 294 294 ASP ASP A . n A 1 108 PRO 108 295 295 PRO PRO A . n A 1 109 PRO 109 296 296 PRO PRO A . n A 1 110 LEU 110 297 297 LEU LEU A . n A 1 111 THR 111 298 298 THR THR A . n A 1 112 ARG 112 299 299 ARG ARG A . n A 1 113 MET 113 300 300 MET MET A . n A 1 114 PRO 114 301 301 PRO PRO A . n A 1 115 LYS 115 302 302 LYS LYS A . n A 1 116 GLY 116 303 303 GLY GLY A . n A 1 117 MET 117 304 304 MET MET A . n A 1 118 TRP 118 305 305 TRP TRP A . n A 1 119 ILE 119 306 306 ILE ILE A . n A 1 120 CYS 120 307 307 CYS CYS A . n A 1 121 GLN 121 308 308 GLN GLN A . n A 1 122 ILE 122 309 309 ILE ILE A . n A 1 123 CYS 123 310 310 CYS CYS A . n A 1 124 ARG 124 311 311 ARG ARG A . n A 1 125 PRO 125 312 312 PRO PRO A . n A 1 126 ARG 126 313 313 ARG ARG A . n A 1 127 LYS 127 314 314 LYS LYS A . n A 1 128 LYS 128 315 315 LYS LYS A . n A 1 129 GLY 129 316 316 GLY GLY A . n A 1 130 ARG 130 317 ? ? ? A . n A 1 131 LYS 131 318 ? ? ? A . n A 1 132 LEU 132 319 ? ? ? A . n A 1 133 LEU 133 320 ? ? ? A . n A 1 134 GLN 134 321 ? ? ? A . n A 1 135 LYS 135 322 ? ? ? A . n A 1 136 LYS 136 323 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 502 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id F _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 51 ? A HIS 238 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 22 ? A CYS 209 ? 1_555 96.7 ? 2 ND1 ? A HIS 51 ? A HIS 238 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 25 ? A CYS 212 ? 1_555 95.1 ? 3 SG ? A CYS 22 ? A CYS 209 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 25 ? A CYS 212 ? 1_555 109.9 ? 4 ND1 ? A HIS 51 ? A HIS 238 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 54 ? A CYS 241 ? 1_555 125.9 ? 5 SG ? A CYS 22 ? A CYS 209 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 54 ? A CYS 241 ? 1_555 110.9 ? 6 SG ? A CYS 25 ? A CYS 212 ? 1_555 ZN ? D ZN . ? A ZN 403 ? 1_555 SG ? A CYS 54 ? A CYS 241 ? 1_555 115.9 ? 7 ND1 ? A HIS 102 ? A HIS 289 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 105 ? A CYS 292 ? 1_555 129.4 ? 8 ND1 ? A HIS 102 ? A HIS 289 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 78 ? A CYS 265 ? 1_555 107.5 ? 9 SG ? A CYS 105 ? A CYS 292 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 78 ? A CYS 265 ? 1_555 119.8 ? 10 ND1 ? A HIS 102 ? A HIS 289 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 81 ? A CYS 268 ? 1_555 93.3 ? 11 SG ? A CYS 105 ? A CYS 292 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 81 ? A CYS 268 ? 1_555 101.6 ? 12 SG ? A CYS 78 ? A CYS 265 ? 1_555 ZN ? C ZN . ? A ZN 402 ? 1_555 SG ? A CYS 81 ? A CYS 268 ? 1_555 91.7 ? 13 SG ? A CYS 120 ? A CYS 307 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 97 ? A CYS 284 ? 1_555 105.1 ? 14 SG ? A CYS 120 ? A CYS 307 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 94 ? A CYS 281 ? 1_555 99.6 ? 15 SG ? A CYS 97 ? A CYS 284 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 94 ? A CYS 281 ? 1_555 113.8 ? 16 SG ? A CYS 120 ? A CYS 307 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 123 ? A CYS 310 ? 1_555 109.1 ? 17 SG ? A CYS 97 ? A CYS 284 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 123 ? A CYS 310 ? 1_555 100.2 ? 18 SG ? A CYS 94 ? A CYS 281 ? 1_555 ZN ? B ZN . ? A ZN 401 ? 1_555 SG ? A CYS 123 ? A CYS 310 ? 1_555 127.4 ? 19 SG ? A CYS 75 ? A CYS 262 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 46 ? A CYS 233 ? 1_555 110.7 ? 20 SG ? A CYS 75 ? A CYS 262 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 72 ? A CYS 259 ? 1_555 102.3 ? 21 SG ? A CYS 46 ? A CYS 233 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 72 ? A CYS 259 ? 1_555 102.7 ? 22 SG ? A CYS 75 ? A CYS 262 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 43 ? A CYS 230 ? 1_555 114.5 ? 23 SG ? A CYS 46 ? A CYS 233 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 43 ? A CYS 230 ? 1_555 108.5 ? 24 SG ? A CYS 72 ? A CYS 259 ? 1_555 ZN ? E ZN . ? A ZN 404 ? 1_555 SG ? A CYS 43 ? A CYS 230 ? 1_555 117.4 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-16 2 'Structure model' 1 1 2014-02-05 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER . ? program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 PHENIX 1.8_1069 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 XDS . ? ? ? ? 'data reduction' ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 207 ? ? -82.27 37.20 2 1 ASN A 219 ? ? -85.34 -159.45 3 1 GLU A 225 ? ? -166.81 119.76 4 1 ALA A 275 ? ? 56.95 -161.65 5 1 ASN A 277 ? ? -100.08 48.55 6 1 ARG A 311 ? ? -161.06 79.90 7 1 LYS A 314 ? ? -68.08 99.44 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ASN 274 ? CG ? A ASN 87 CG 2 1 Y 1 A ASN 274 ? OD1 ? A ASN 87 OD1 3 1 Y 1 A ASN 274 ? ND2 ? A ASN 87 ND2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 188 ? A GLY 1 2 1 Y 1 A SER 189 ? A SER 2 3 1 Y 1 A HIS 190 ? A HIS 3 4 1 Y 1 A MET 191 ? A MET 4 5 1 Y 1 A LEU 192 ? A LEU 5 6 1 Y 1 A ASP 270 ? A ASP 83 7 1 Y 1 A GLN 271 ? A GLN 84 8 1 Y 1 A GLY 272 ? A GLY 85 9 1 Y 1 A LYS 273 ? A LYS 86 10 1 Y 1 A ARG 317 ? A ARG 130 11 1 Y 1 A LYS 318 ? A LYS 131 12 1 Y 1 A LEU 319 ? A LEU 132 13 1 Y 1 A LEU 320 ? A LEU 133 14 1 Y 1 A GLN 321 ? A GLN 134 15 1 Y 1 A LYS 322 ? A LYS 135 16 1 Y 1 A LYS 323 ? A LYS 136 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 ZN 1 401 317 ZN ZN A . C 2 ZN 1 402 318 ZN ZN A . D 2 ZN 1 403 319 ZN ZN A . E 2 ZN 1 404 320 ZN ZN A . F 3 HOH 1 501 350 HOH HOH A . F 3 HOH 2 502 351 HOH HOH A . F 3 HOH 3 503 352 HOH HOH A . F 3 HOH 4 504 353 HOH HOH A . F 3 HOH 5 505 355 HOH HOH A . F 3 HOH 6 506 356 HOH HOH A . #