data_4LJS # _entry.id 4LJS # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LJS pdb_00004ljs 10.2210/pdb4ljs/pdb RCSB RCSB080717 ? ? WWPDB D_1000080717 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-24 2 'Structure model' 1 1 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_entry_details 5 2 'Structure model' pdbx_modification_feature 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 2 'Structure model' '_struct_ref_seq_dif.details' 5 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LJS _pdbx_database_status.recvd_initial_deposition_date 2013-07-05 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC100837 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Chhor, G.' 2 'Endres, M.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'The crystal structure of a periplasmic binding protein from Veillonella parvula DSM 2008' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Tan, K.' 1 ? primary 'Chhor, G.' 2 ? primary 'Endres, M.' 3 ? primary 'Joachimiak, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Periplasmic binding protein' 37123.527 1 ? ? 'UNP residues 20-340' ? 2 non-polymer syn GLYCEROL 92.094 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 101 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAQQVTVEDHQSTPVHIKLQPPVTIESFVRRGEPFESTYTAVPERVVA(MSE)WQNSIETIIALGEGDRIVAG(MSE)G IPDRKYVRPEYREAYDKIPYKDLKYANLESVL(MSE)(MSE)KPDLLVGWKSTFTNK(MSE)LQTPTFWQARLANVYIAE SSLGAQSALT(MSE)D(MSE)EYKYIRDLGRIFNRN(MSE)EAERLIQE(MSE)QQSVAYTVAQTAHEKPPKALFIEVQG KHFRLYGHKTLAGNIGASLHADVIDTETPSIS(MSE)EDVVEQNPDVIFLIVSDGEYSQADVI(MSE)NYVLTQSGLQGV NALRNKRVHFLPLLAVYSPGIRLLDSIDIVSHGLYPNLYPEGVPDLIH ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAQQVTVEDHQSTPVHIKLQPPVTIESFVRRGEPFESTYTAVPERVVAMWQNSIETIIALGEGDRIVAGMGIPDRKYVR PEYREAYDKIPYKDLKYANLESVLMMKPDLLVGWKSTFTNKMLQTPTFWQARLANVYIAESSLGAQSALTMDMEYKYIRD LGRIFNRNMEAERLIQEMQQSVAYTVAQTAHEKPPKALFIEVQGKHFRLYGHKTLAGNIGASLHADVIDTETPSISMEDV VEQNPDVIFLIVSDGEYSQADVIMNYVLTQSGLQGVNALRNKRVHFLPLLAVYSPGIRLLDSIDIVSHGLYPNLYPEGVP DLIH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC100837 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'PHOSPHATE ION' PO4 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLN n 1 5 GLN n 1 6 VAL n 1 7 THR n 1 8 VAL n 1 9 GLU n 1 10 ASP n 1 11 HIS n 1 12 GLN n 1 13 SER n 1 14 THR n 1 15 PRO n 1 16 VAL n 1 17 HIS n 1 18 ILE n 1 19 LYS n 1 20 LEU n 1 21 GLN n 1 22 PRO n 1 23 PRO n 1 24 VAL n 1 25 THR n 1 26 ILE n 1 27 GLU n 1 28 SER n 1 29 PHE n 1 30 VAL n 1 31 ARG n 1 32 ARG n 1 33 GLY n 1 34 GLU n 1 35 PRO n 1 36 PHE n 1 37 GLU n 1 38 SER n 1 39 THR n 1 40 TYR n 1 41 THR n 1 42 ALA n 1 43 VAL n 1 44 PRO n 1 45 GLU n 1 46 ARG n 1 47 VAL n 1 48 VAL n 1 49 ALA n 1 50 MSE n 1 51 TRP n 1 52 GLN n 1 53 ASN n 1 54 SER n 1 55 ILE n 1 56 GLU n 1 57 THR n 1 58 ILE n 1 59 ILE n 1 60 ALA n 1 61 LEU n 1 62 GLY n 1 63 GLU n 1 64 GLY n 1 65 ASP n 1 66 ARG n 1 67 ILE n 1 68 VAL n 1 69 ALA n 1 70 GLY n 1 71 MSE n 1 72 GLY n 1 73 ILE n 1 74 PRO n 1 75 ASP n 1 76 ARG n 1 77 LYS n 1 78 TYR n 1 79 VAL n 1 80 ARG n 1 81 PRO n 1 82 GLU n 1 83 TYR n 1 84 ARG n 1 85 GLU n 1 86 ALA n 1 87 TYR n 1 88 ASP n 1 89 LYS n 1 90 ILE n 1 91 PRO n 1 92 TYR n 1 93 LYS n 1 94 ASP n 1 95 LEU n 1 96 LYS n 1 97 TYR n 1 98 ALA n 1 99 ASN n 1 100 LEU n 1 101 GLU n 1 102 SER n 1 103 VAL n 1 104 LEU n 1 105 MSE n 1 106 MSE n 1 107 LYS n 1 108 PRO n 1 109 ASP n 1 110 LEU n 1 111 LEU n 1 112 VAL n 1 113 GLY n 1 114 TRP n 1 115 LYS n 1 116 SER n 1 117 THR n 1 118 PHE n 1 119 THR n 1 120 ASN n 1 121 LYS n 1 122 MSE n 1 123 LEU n 1 124 GLN n 1 125 THR n 1 126 PRO n 1 127 THR n 1 128 PHE n 1 129 TRP n 1 130 GLN n 1 131 ALA n 1 132 ARG n 1 133 LEU n 1 134 ALA n 1 135 ASN n 1 136 VAL n 1 137 TYR n 1 138 ILE n 1 139 ALA n 1 140 GLU n 1 141 SER n 1 142 SER n 1 143 LEU n 1 144 GLY n 1 145 ALA n 1 146 GLN n 1 147 SER n 1 148 ALA n 1 149 LEU n 1 150 THR n 1 151 MSE n 1 152 ASP n 1 153 MSE n 1 154 GLU n 1 155 TYR n 1 156 LYS n 1 157 TYR n 1 158 ILE n 1 159 ARG n 1 160 ASP n 1 161 LEU n 1 162 GLY n 1 163 ARG n 1 164 ILE n 1 165 PHE n 1 166 ASN n 1 167 ARG n 1 168 ASN n 1 169 MSE n 1 170 GLU n 1 171 ALA n 1 172 GLU n 1 173 ARG n 1 174 LEU n 1 175 ILE n 1 176 GLN n 1 177 GLU n 1 178 MSE n 1 179 GLN n 1 180 GLN n 1 181 SER n 1 182 VAL n 1 183 ALA n 1 184 TYR n 1 185 THR n 1 186 VAL n 1 187 ALA n 1 188 GLN n 1 189 THR n 1 190 ALA n 1 191 HIS n 1 192 GLU n 1 193 LYS n 1 194 PRO n 1 195 PRO n 1 196 LYS n 1 197 ALA n 1 198 LEU n 1 199 PHE n 1 200 ILE n 1 201 GLU n 1 202 VAL n 1 203 GLN n 1 204 GLY n 1 205 LYS n 1 206 HIS n 1 207 PHE n 1 208 ARG n 1 209 LEU n 1 210 TYR n 1 211 GLY n 1 212 HIS n 1 213 LYS n 1 214 THR n 1 215 LEU n 1 216 ALA n 1 217 GLY n 1 218 ASN n 1 219 ILE n 1 220 GLY n 1 221 ALA n 1 222 SER n 1 223 LEU n 1 224 HIS n 1 225 ALA n 1 226 ASP n 1 227 VAL n 1 228 ILE n 1 229 ASP n 1 230 THR n 1 231 GLU n 1 232 THR n 1 233 PRO n 1 234 SER n 1 235 ILE n 1 236 SER n 1 237 MSE n 1 238 GLU n 1 239 ASP n 1 240 VAL n 1 241 VAL n 1 242 GLU n 1 243 GLN n 1 244 ASN n 1 245 PRO n 1 246 ASP n 1 247 VAL n 1 248 ILE n 1 249 PHE n 1 250 LEU n 1 251 ILE n 1 252 VAL n 1 253 SER n 1 254 ASP n 1 255 GLY n 1 256 GLU n 1 257 TYR n 1 258 SER n 1 259 GLN n 1 260 ALA n 1 261 ASP n 1 262 VAL n 1 263 ILE n 1 264 MSE n 1 265 ASN n 1 266 TYR n 1 267 VAL n 1 268 LEU n 1 269 THR n 1 270 GLN n 1 271 SER n 1 272 GLY n 1 273 LEU n 1 274 GLN n 1 275 GLY n 1 276 VAL n 1 277 ASN n 1 278 ALA n 1 279 LEU n 1 280 ARG n 1 281 ASN n 1 282 LYS n 1 283 ARG n 1 284 VAL n 1 285 HIS n 1 286 PHE n 1 287 LEU n 1 288 PRO n 1 289 LEU n 1 290 LEU n 1 291 ALA n 1 292 VAL n 1 293 TYR n 1 294 SER n 1 295 PRO n 1 296 GLY n 1 297 ILE n 1 298 ARG n 1 299 LEU n 1 300 LEU n 1 301 ASP n 1 302 SER n 1 303 ILE n 1 304 ASP n 1 305 ILE n 1 306 VAL n 1 307 SER n 1 308 HIS n 1 309 GLY n 1 310 LEU n 1 311 TYR n 1 312 PRO n 1 313 ASN n 1 314 LEU n 1 315 TYR n 1 316 PRO n 1 317 GLU n 1 318 GLY n 1 319 VAL n 1 320 PRO n 1 321 ASP n 1 322 LEU n 1 323 ILE n 1 324 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Vpar_0062 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'DSM 2008' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Veillonella parvula' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 479436 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG68 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 17 ? ? ? A . n A 1 2 ASN 2 18 ? ? ? A . n A 1 3 ALA 3 19 ? ? ? A . n A 1 4 GLN 4 20 ? ? ? A . n A 1 5 GLN 5 21 ? ? ? A . n A 1 6 VAL 6 22 ? ? ? A . n A 1 7 THR 7 23 ? ? ? A . n A 1 8 VAL 8 24 24 VAL VAL A . n A 1 9 GLU 9 25 25 GLU GLU A . n A 1 10 ASP 10 26 26 ASP ASP A . n A 1 11 HIS 11 27 27 HIS HIS A . n A 1 12 GLN 12 28 28 GLN GLN A . n A 1 13 SER 13 29 29 SER SER A . n A 1 14 THR 14 30 30 THR THR A . n A 1 15 PRO 15 31 31 PRO PRO A . n A 1 16 VAL 16 32 32 VAL VAL A . n A 1 17 HIS 17 33 33 HIS HIS A . n A 1 18 ILE 18 34 34 ILE ILE A . n A 1 19 LYS 19 35 35 LYS LYS A . n A 1 20 LEU 20 36 36 LEU LEU A . n A 1 21 GLN 21 37 37 GLN GLN A . n A 1 22 PRO 22 38 38 PRO PRO A . n A 1 23 PRO 23 39 39 PRO PRO A . n A 1 24 VAL 24 40 40 VAL VAL A . n A 1 25 THR 25 41 41 THR THR A . n A 1 26 ILE 26 42 42 ILE ILE A . n A 1 27 GLU 27 43 43 GLU GLU A . n A 1 28 SER 28 44 44 SER SER A . n A 1 29 PHE 29 45 45 PHE PHE A . n A 1 30 VAL 30 46 46 VAL VAL A . n A 1 31 ARG 31 47 47 ARG ARG A . n A 1 32 ARG 32 48 48 ARG ARG A . n A 1 33 GLY 33 49 49 GLY GLY A . n A 1 34 GLU 34 50 50 GLU GLU A . n A 1 35 PRO 35 51 51 PRO PRO A . n A 1 36 PHE 36 52 52 PHE PHE A . n A 1 37 GLU 37 53 53 GLU GLU A . n A 1 38 SER 38 54 54 SER SER A . n A 1 39 THR 39 55 55 THR THR A . n A 1 40 TYR 40 56 56 TYR TYR A . n A 1 41 THR 41 57 57 THR THR A . n A 1 42 ALA 42 58 58 ALA ALA A . n A 1 43 VAL 43 59 59 VAL VAL A . n A 1 44 PRO 44 60 60 PRO PRO A . n A 1 45 GLU 45 61 61 GLU GLU A . n A 1 46 ARG 46 62 62 ARG ARG A . n A 1 47 VAL 47 63 63 VAL VAL A . n A 1 48 VAL 48 64 64 VAL VAL A . n A 1 49 ALA 49 65 65 ALA ALA A . n A 1 50 MSE 50 66 66 MSE MSE A . n A 1 51 TRP 51 67 67 TRP TRP A . n A 1 52 GLN 52 68 68 GLN GLN A . n A 1 53 ASN 53 69 69 ASN ASN A . n A 1 54 SER 54 70 70 SER SER A . n A 1 55 ILE 55 71 71 ILE ILE A . n A 1 56 GLU 56 72 72 GLU GLU A . n A 1 57 THR 57 73 73 THR THR A . n A 1 58 ILE 58 74 74 ILE ILE A . n A 1 59 ILE 59 75 75 ILE ILE A . n A 1 60 ALA 60 76 76 ALA ALA A . n A 1 61 LEU 61 77 77 LEU LEU A . n A 1 62 GLY 62 78 78 GLY GLY A . n A 1 63 GLU 63 79 79 GLU GLU A . n A 1 64 GLY 64 80 80 GLY GLY A . n A 1 65 ASP 65 81 81 ASP ASP A . n A 1 66 ARG 66 82 82 ARG ARG A . n A 1 67 ILE 67 83 83 ILE ILE A . n A 1 68 VAL 68 84 84 VAL VAL A . n A 1 69 ALA 69 85 85 ALA ALA A . n A 1 70 GLY 70 86 86 GLY GLY A . n A 1 71 MSE 71 87 87 MSE MSE A . n A 1 72 GLY 72 88 88 GLY GLY A . n A 1 73 ILE 73 89 89 ILE ILE A . n A 1 74 PRO 74 90 90 PRO PRO A . n A 1 75 ASP 75 91 91 ASP ASP A . n A 1 76 ARG 76 92 92 ARG ARG A . n A 1 77 LYS 77 93 93 LYS LYS A . n A 1 78 TYR 78 94 94 TYR TYR A . n A 1 79 VAL 79 95 95 VAL VAL A . n A 1 80 ARG 80 96 96 ARG ARG A . n A 1 81 PRO 81 97 97 PRO PRO A . n A 1 82 GLU 82 98 98 GLU GLU A . n A 1 83 TYR 83 99 99 TYR TYR A . n A 1 84 ARG 84 100 100 ARG ARG A . n A 1 85 GLU 85 101 101 GLU GLU A . n A 1 86 ALA 86 102 102 ALA ALA A . n A 1 87 TYR 87 103 103 TYR TYR A . n A 1 88 ASP 88 104 104 ASP ASP A . n A 1 89 LYS 89 105 105 LYS LYS A . n A 1 90 ILE 90 106 106 ILE ILE A . n A 1 91 PRO 91 107 107 PRO PRO A . n A 1 92 TYR 92 108 108 TYR TYR A . n A 1 93 LYS 93 109 109 LYS LYS A . n A 1 94 ASP 94 110 110 ASP ASP A . n A 1 95 LEU 95 111 111 LEU LEU A . n A 1 96 LYS 96 112 112 LYS LYS A . n A 1 97 TYR 97 113 113 TYR TYR A . n A 1 98 ALA 98 114 114 ALA ALA A . n A 1 99 ASN 99 115 115 ASN ASN A . n A 1 100 LEU 100 116 116 LEU LEU A . n A 1 101 GLU 101 117 117 GLU GLU A . n A 1 102 SER 102 118 118 SER SER A . n A 1 103 VAL 103 119 119 VAL VAL A . n A 1 104 LEU 104 120 120 LEU LEU A . n A 1 105 MSE 105 121 121 MSE MSE A . n A 1 106 MSE 106 122 122 MSE MSE A . n A 1 107 LYS 107 123 123 LYS LYS A . n A 1 108 PRO 108 124 124 PRO PRO A . n A 1 109 ASP 109 125 125 ASP ASP A . n A 1 110 LEU 110 126 126 LEU LEU A . n A 1 111 LEU 111 127 127 LEU LEU A . n A 1 112 VAL 112 128 128 VAL VAL A . n A 1 113 GLY 113 129 129 GLY GLY A . n A 1 114 TRP 114 130 130 TRP TRP A . n A 1 115 LYS 115 131 131 LYS LYS A . n A 1 116 SER 116 132 132 SER SER A . n A 1 117 THR 117 133 133 THR THR A . n A 1 118 PHE 118 134 134 PHE PHE A . n A 1 119 THR 119 135 135 THR THR A . n A 1 120 ASN 120 136 136 ASN ASN A . n A 1 121 LYS 121 137 137 LYS LYS A . n A 1 122 MSE 122 138 138 MSE MSE A . n A 1 123 LEU 123 139 139 LEU LEU A . n A 1 124 GLN 124 140 140 GLN GLN A . n A 1 125 THR 125 141 141 THR THR A . n A 1 126 PRO 126 142 142 PRO PRO A . n A 1 127 THR 127 143 143 THR THR A . n A 1 128 PHE 128 144 144 PHE PHE A . n A 1 129 TRP 129 145 145 TRP TRP A . n A 1 130 GLN 130 146 146 GLN GLN A . n A 1 131 ALA 131 147 147 ALA ALA A . n A 1 132 ARG 132 148 148 ARG ARG A . n A 1 133 LEU 133 149 149 LEU LEU A . n A 1 134 ALA 134 150 150 ALA ALA A . n A 1 135 ASN 135 151 151 ASN ASN A . n A 1 136 VAL 136 152 152 VAL VAL A . n A 1 137 TYR 137 153 153 TYR TYR A . n A 1 138 ILE 138 154 154 ILE ILE A . n A 1 139 ALA 139 155 155 ALA ALA A . n A 1 140 GLU 140 156 156 GLU GLU A . n A 1 141 SER 141 157 157 SER SER A . n A 1 142 SER 142 158 158 SER SER A . n A 1 143 LEU 143 159 159 LEU LEU A . n A 1 144 GLY 144 160 160 GLY GLY A . n A 1 145 ALA 145 161 161 ALA ALA A . n A 1 146 GLN 146 162 162 GLN GLN A . n A 1 147 SER 147 163 163 SER SER A . n A 1 148 ALA 148 164 164 ALA ALA A . n A 1 149 LEU 149 165 165 LEU LEU A . n A 1 150 THR 150 166 166 THR THR A . n A 1 151 MSE 151 167 167 MSE MSE A . n A 1 152 ASP 152 168 168 ASP ASP A . n A 1 153 MSE 153 169 169 MSE MSE A . n A 1 154 GLU 154 170 170 GLU GLU A . n A 1 155 TYR 155 171 171 TYR TYR A . n A 1 156 LYS 156 172 172 LYS LYS A . n A 1 157 TYR 157 173 173 TYR TYR A . n A 1 158 ILE 158 174 174 ILE ILE A . n A 1 159 ARG 159 175 175 ARG ARG A . n A 1 160 ASP 160 176 176 ASP ASP A . n A 1 161 LEU 161 177 177 LEU LEU A . n A 1 162 GLY 162 178 178 GLY GLY A . n A 1 163 ARG 163 179 179 ARG ARG A . n A 1 164 ILE 164 180 180 ILE ILE A . n A 1 165 PHE 165 181 181 PHE PHE A . n A 1 166 ASN 166 182 182 ASN ASN A . n A 1 167 ARG 167 183 183 ARG ARG A . n A 1 168 ASN 168 184 184 ASN ASN A . n A 1 169 MSE 169 185 185 MSE MSE A . n A 1 170 GLU 170 186 186 GLU GLU A . n A 1 171 ALA 171 187 187 ALA ALA A . n A 1 172 GLU 172 188 188 GLU GLU A . n A 1 173 ARG 173 189 189 ARG ARG A . n A 1 174 LEU 174 190 190 LEU LEU A . n A 1 175 ILE 175 191 191 ILE ILE A . n A 1 176 GLN 176 192 192 GLN GLN A . n A 1 177 GLU 177 193 193 GLU GLU A . n A 1 178 MSE 178 194 194 MSE MSE A . n A 1 179 GLN 179 195 195 GLN GLN A . n A 1 180 GLN 180 196 196 GLN GLN A . n A 1 181 SER 181 197 197 SER SER A . n A 1 182 VAL 182 198 198 VAL VAL A . n A 1 183 ALA 183 199 199 ALA ALA A . n A 1 184 TYR 184 200 200 TYR TYR A . n A 1 185 THR 185 201 201 THR THR A . n A 1 186 VAL 186 202 202 VAL VAL A . n A 1 187 ALA 187 203 203 ALA ALA A . n A 1 188 GLN 188 204 204 GLN GLN A . n A 1 189 THR 189 205 205 THR THR A . n A 1 190 ALA 190 206 206 ALA ALA A . n A 1 191 HIS 191 207 207 HIS HIS A . n A 1 192 GLU 192 208 208 GLU GLU A . n A 1 193 LYS 193 209 209 LYS LYS A . n A 1 194 PRO 194 210 210 PRO PRO A . n A 1 195 PRO 195 211 211 PRO PRO A . n A 1 196 LYS 196 212 212 LYS LYS A . n A 1 197 ALA 197 213 213 ALA ALA A . n A 1 198 LEU 198 214 214 LEU LEU A . n A 1 199 PHE 199 215 215 PHE PHE A . n A 1 200 ILE 200 216 216 ILE ILE A . n A 1 201 GLU 201 217 217 GLU GLU A . n A 1 202 VAL 202 218 218 VAL VAL A . n A 1 203 GLN 203 219 219 GLN GLN A . n A 1 204 GLY 204 220 220 GLY GLY A . n A 1 205 LYS 205 221 221 LYS LYS A . n A 1 206 HIS 206 222 222 HIS HIS A . n A 1 207 PHE 207 223 223 PHE PHE A . n A 1 208 ARG 208 224 224 ARG ARG A . n A 1 209 LEU 209 225 225 LEU LEU A . n A 1 210 TYR 210 226 226 TYR TYR A . n A 1 211 GLY 211 227 227 GLY GLY A . n A 1 212 HIS 212 228 228 HIS HIS A . n A 1 213 LYS 213 229 229 LYS LYS A . n A 1 214 THR 214 230 230 THR THR A . n A 1 215 LEU 215 231 231 LEU LEU A . n A 1 216 ALA 216 232 232 ALA ALA A . n A 1 217 GLY 217 233 233 GLY GLY A . n A 1 218 ASN 218 234 234 ASN ASN A . n A 1 219 ILE 219 235 235 ILE ILE A . n A 1 220 GLY 220 236 236 GLY GLY A . n A 1 221 ALA 221 237 237 ALA ALA A . n A 1 222 SER 222 238 238 SER SER A . n A 1 223 LEU 223 239 239 LEU LEU A . n A 1 224 HIS 224 240 240 HIS HIS A . n A 1 225 ALA 225 241 241 ALA ALA A . n A 1 226 ASP 226 242 242 ASP ASP A . n A 1 227 VAL 227 243 243 VAL VAL A . n A 1 228 ILE 228 244 244 ILE ILE A . n A 1 229 ASP 229 245 245 ASP ASP A . n A 1 230 THR 230 246 246 THR THR A . n A 1 231 GLU 231 247 247 GLU GLU A . n A 1 232 THR 232 248 248 THR THR A . n A 1 233 PRO 233 249 249 PRO PRO A . n A 1 234 SER 234 250 250 SER SER A . n A 1 235 ILE 235 251 251 ILE ILE A . n A 1 236 SER 236 252 252 SER SER A . n A 1 237 MSE 237 253 253 MSE MSE A . n A 1 238 GLU 238 254 254 GLU GLU A . n A 1 239 ASP 239 255 255 ASP ASP A . n A 1 240 VAL 240 256 256 VAL VAL A . n A 1 241 VAL 241 257 257 VAL VAL A . n A 1 242 GLU 242 258 258 GLU GLU A . n A 1 243 GLN 243 259 259 GLN GLN A . n A 1 244 ASN 244 260 260 ASN ASN A . n A 1 245 PRO 245 261 261 PRO PRO A . n A 1 246 ASP 246 262 262 ASP ASP A . n A 1 247 VAL 247 263 263 VAL VAL A . n A 1 248 ILE 248 264 264 ILE ILE A . n A 1 249 PHE 249 265 265 PHE PHE A . n A 1 250 LEU 250 266 266 LEU LEU A . n A 1 251 ILE 251 267 267 ILE ILE A . n A 1 252 VAL 252 268 268 VAL VAL A . n A 1 253 SER 253 269 269 SER SER A . n A 1 254 ASP 254 270 270 ASP ASP A . n A 1 255 GLY 255 271 271 GLY GLY A . n A 1 256 GLU 256 272 272 GLU GLU A . n A 1 257 TYR 257 273 273 TYR TYR A . n A 1 258 SER 258 274 274 SER SER A . n A 1 259 GLN 259 275 275 GLN GLN A . n A 1 260 ALA 260 276 276 ALA ALA A . n A 1 261 ASP 261 277 277 ASP ASP A . n A 1 262 VAL 262 278 278 VAL VAL A . n A 1 263 ILE 263 279 279 ILE ILE A . n A 1 264 MSE 264 280 280 MSE MSE A . n A 1 265 ASN 265 281 281 ASN ASN A . n A 1 266 TYR 266 282 282 TYR TYR A . n A 1 267 VAL 267 283 283 VAL VAL A . n A 1 268 LEU 268 284 284 LEU LEU A . n A 1 269 THR 269 285 285 THR THR A . n A 1 270 GLN 270 286 286 GLN GLN A . n A 1 271 SER 271 287 287 SER SER A . n A 1 272 GLY 272 288 288 GLY GLY A . n A 1 273 LEU 273 289 289 LEU LEU A . n A 1 274 GLN 274 290 290 GLN GLN A . n A 1 275 GLY 275 291 291 GLY GLY A . n A 1 276 VAL 276 292 292 VAL VAL A . n A 1 277 ASN 277 293 293 ASN ASN A . n A 1 278 ALA 278 294 294 ALA ALA A . n A 1 279 LEU 279 295 295 LEU LEU A . n A 1 280 ARG 280 296 296 ARG ARG A . n A 1 281 ASN 281 297 297 ASN ASN A . n A 1 282 LYS 282 298 298 LYS LYS A . n A 1 283 ARG 283 299 299 ARG ARG A . n A 1 284 VAL 284 300 300 VAL VAL A . n A 1 285 HIS 285 301 301 HIS HIS A . n A 1 286 PHE 286 302 302 PHE PHE A . n A 1 287 LEU 287 303 303 LEU LEU A . n A 1 288 PRO 288 304 304 PRO PRO A . n A 1 289 LEU 289 305 305 LEU LEU A . n A 1 290 LEU 290 306 306 LEU LEU A . n A 1 291 ALA 291 307 307 ALA ALA A . n A 1 292 VAL 292 308 308 VAL VAL A . n A 1 293 TYR 293 309 309 TYR TYR A . n A 1 294 SER 294 310 310 SER SER A . n A 1 295 PRO 295 311 311 PRO PRO A . n A 1 296 GLY 296 312 312 GLY GLY A . n A 1 297 ILE 297 313 313 ILE ILE A . n A 1 298 ARG 298 314 314 ARG ARG A . n A 1 299 LEU 299 315 315 LEU LEU A . n A 1 300 LEU 300 316 316 LEU LEU A . n A 1 301 ASP 301 317 317 ASP ASP A . n A 1 302 SER 302 318 318 SER SER A . n A 1 303 ILE 303 319 319 ILE ILE A . n A 1 304 ASP 304 320 320 ASP ASP A . n A 1 305 ILE 305 321 321 ILE ILE A . n A 1 306 VAL 306 322 322 VAL VAL A . n A 1 307 SER 307 323 323 SER SER A . n A 1 308 HIS 308 324 324 HIS HIS A . n A 1 309 GLY 309 325 325 GLY GLY A . n A 1 310 LEU 310 326 326 LEU LEU A . n A 1 311 TYR 311 327 327 TYR TYR A . n A 1 312 PRO 312 328 328 PRO PRO A . n A 1 313 ASN 313 329 329 ASN ASN A . n A 1 314 LEU 314 330 330 LEU LEU A . n A 1 315 TYR 315 331 331 TYR TYR A . n A 1 316 PRO 316 332 332 PRO PRO A . n A 1 317 GLU 317 333 333 GLU GLU A . n A 1 318 GLY 318 334 334 GLY GLY A . n A 1 319 VAL 319 335 335 VAL VAL A . n A 1 320 PRO 320 336 336 PRO PRO A . n A 1 321 ASP 321 337 337 ASP ASP A . n A 1 322 LEU 322 338 338 LEU LEU A . n A 1 323 ILE 323 339 339 ILE ILE A . n A 1 324 HIS 324 340 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 401 1 GOL GOL A . C 3 PO4 1 402 1 PO4 PO4 A . D 4 HOH 1 501 1 HOH HOH A . D 4 HOH 2 502 2 HOH HOH A . D 4 HOH 3 503 3 HOH HOH A . D 4 HOH 4 504 4 HOH HOH A . D 4 HOH 5 505 5 HOH HOH A . D 4 HOH 6 506 6 HOH HOH A . D 4 HOH 7 507 7 HOH HOH A . D 4 HOH 8 508 8 HOH HOH A . D 4 HOH 9 509 9 HOH HOH A . D 4 HOH 10 510 10 HOH HOH A . D 4 HOH 11 511 11 HOH HOH A . D 4 HOH 12 512 12 HOH HOH A . D 4 HOH 13 513 13 HOH HOH A . D 4 HOH 14 514 14 HOH HOH A . D 4 HOH 15 515 15 HOH HOH A . D 4 HOH 16 516 16 HOH HOH A . D 4 HOH 17 517 17 HOH HOH A . D 4 HOH 18 518 18 HOH HOH A . D 4 HOH 19 519 19 HOH HOH A . D 4 HOH 20 520 20 HOH HOH A . D 4 HOH 21 521 21 HOH HOH A . D 4 HOH 22 522 22 HOH HOH A . D 4 HOH 23 523 23 HOH HOH A . D 4 HOH 24 524 24 HOH HOH A . D 4 HOH 25 525 25 HOH HOH A . D 4 HOH 26 526 26 HOH HOH A . D 4 HOH 27 527 27 HOH HOH A . D 4 HOH 28 528 28 HOH HOH A . D 4 HOH 29 529 29 HOH HOH A . D 4 HOH 30 530 30 HOH HOH A . D 4 HOH 31 531 31 HOH HOH A . D 4 HOH 32 532 32 HOH HOH A . D 4 HOH 33 533 33 HOH HOH A . D 4 HOH 34 534 34 HOH HOH A . D 4 HOH 35 535 35 HOH HOH A . D 4 HOH 36 536 36 HOH HOH A . D 4 HOH 37 537 37 HOH HOH A . D 4 HOH 38 538 38 HOH HOH A . D 4 HOH 39 539 39 HOH HOH A . D 4 HOH 40 540 40 HOH HOH A . D 4 HOH 41 541 41 HOH HOH A . D 4 HOH 42 542 42 HOH HOH A . D 4 HOH 43 543 43 HOH HOH A . D 4 HOH 44 544 44 HOH HOH A . D 4 HOH 45 545 45 HOH HOH A . D 4 HOH 46 546 46 HOH HOH A . D 4 HOH 47 547 47 HOH HOH A . D 4 HOH 48 548 48 HOH HOH A . D 4 HOH 49 549 49 HOH HOH A . D 4 HOH 50 550 50 HOH HOH A . D 4 HOH 51 551 51 HOH HOH A . D 4 HOH 52 552 52 HOH HOH A . D 4 HOH 53 553 53 HOH HOH A . D 4 HOH 54 554 54 HOH HOH A . D 4 HOH 55 555 55 HOH HOH A . D 4 HOH 56 556 56 HOH HOH A . D 4 HOH 57 557 57 HOH HOH A . D 4 HOH 58 558 58 HOH HOH A . D 4 HOH 59 559 59 HOH HOH A . D 4 HOH 60 560 60 HOH HOH A . D 4 HOH 61 561 61 HOH HOH A . D 4 HOH 62 562 62 HOH HOH A . D 4 HOH 63 563 63 HOH HOH A . D 4 HOH 64 564 64 HOH HOH A . D 4 HOH 65 565 65 HOH HOH A . D 4 HOH 66 566 66 HOH HOH A . D 4 HOH 67 567 67 HOH HOH A . D 4 HOH 68 568 68 HOH HOH A . D 4 HOH 69 569 69 HOH HOH A . D 4 HOH 70 570 70 HOH HOH A . D 4 HOH 71 571 71 HOH HOH A . D 4 HOH 72 572 72 HOH HOH A . D 4 HOH 73 573 73 HOH HOH A . D 4 HOH 74 574 74 HOH HOH A . D 4 HOH 75 575 75 HOH HOH A . D 4 HOH 76 576 76 HOH HOH A . D 4 HOH 77 577 77 HOH HOH A . D 4 HOH 78 578 78 HOH HOH A . D 4 HOH 79 579 79 HOH HOH A . D 4 HOH 80 580 80 HOH HOH A . D 4 HOH 81 581 81 HOH HOH A . D 4 HOH 82 582 82 HOH HOH A . D 4 HOH 83 583 83 HOH HOH A . D 4 HOH 84 584 84 HOH HOH A . D 4 HOH 85 585 85 HOH HOH A . D 4 HOH 86 586 86 HOH HOH A . D 4 HOH 87 587 87 HOH HOH A . D 4 HOH 88 588 88 HOH HOH A . D 4 HOH 89 589 89 HOH HOH A . D 4 HOH 90 590 90 HOH HOH A . D 4 HOH 91 591 91 HOH HOH A . D 4 HOH 92 592 92 HOH HOH A . D 4 HOH 93 593 94 HOH HOH A . D 4 HOH 94 594 95 HOH HOH A . D 4 HOH 95 595 96 HOH HOH A . D 4 HOH 96 596 97 HOH HOH A . D 4 HOH 97 597 98 HOH HOH A . D 4 HOH 98 598 99 HOH HOH A . D 4 HOH 99 599 100 HOH HOH A . D 4 HOH 100 600 101 HOH HOH A . D 4 HOH 101 601 102 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 35 ? CE ? A LYS 19 CE 2 1 Y 1 A LYS 35 ? NZ ? A LYS 19 NZ 3 1 Y 1 A LYS 221 ? CG ? A LYS 205 CG 4 1 Y 1 A LYS 221 ? CD ? A LYS 205 CD 5 1 Y 1 A LYS 221 ? CE ? A LYS 205 CE 6 1 Y 1 A LYS 221 ? NZ ? A LYS 205 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 ARP 'model building' . ? 5 WARP 'model building' . ? 6 HKL-3000 phasing . ? 7 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 # _cell.entry_id 4LJS _cell.length_a 82.994 _cell.length_b 82.994 _cell.length_c 110.419 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LJS _symmetry.space_group_name_H-M 'P 62' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 171 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4LJS _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_percent_sol 58.40 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 297 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_details '0.8M Potassium sodium tartrate, 0.1M Tris:HCl, 0.5%(w/v) PEG MME 5000, pH 8.5, VAPOR DIFFUSION, SITTING DROP, temperature 297K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-02-15 _diffrn_detector.details Mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97929 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97929 # _reflns.entry_id 4LJS _reflns.observed_criterion_sigma_I -5 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30.2 _reflns.d_resolution_high 2.32 _reflns.number_obs 18692 _reflns.number_all 18692 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.102 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 38.3 _reflns.B_iso_Wilson_estimate 42.77 _reflns.pdbx_redundancy 7.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.32 _reflns_shell.d_res_low 2.36 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.571 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.0 _reflns_shell.pdbx_redundancy 7.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 938 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4LJS _refine.ls_number_reflns_obs 18656 _refine.ls_number_reflns_all 18656 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.119 _refine.ls_d_res_high 2.321 _refine.ls_percent_reflns_obs 99.91 _refine.ls_R_factor_obs 0.1564 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1538 _refine.ls_R_factor_R_free 0.2077 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.11 _refine.ls_number_reflns_R_free 953 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.22 _refine.pdbx_overall_phase_error 21.59 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2508 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 11 _refine_hist.number_atoms_solvent 101 _refine_hist.number_atoms_total 2620 _refine_hist.d_res_high 2.321 _refine_hist.d_res_low 30.119 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 2583 ? 'X-RAY DIFFRACTION' f_angle_d 0.915 ? ? 3513 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 14.184 ? ? 965 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.061 ? ? 394 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 454 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 2.3211 2.4434 2496 0.1878 100.00 0.2543 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.4434 2.5964 2531 0.1807 100.00 0.2290 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.5964 2.7968 2513 0.1862 100.00 0.2492 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.7968 3.0780 2545 0.1925 100.00 0.2946 . . 137 . . . . 'X-RAY DIFFRACTION' . 3.0780 3.5228 2492 0.1758 100.00 0.2302 . . 143 . . . . 'X-RAY DIFFRACTION' . 3.5228 4.4361 2558 0.1339 100.00 0.1832 . . 124 . . . . 'X-RAY DIFFRACTION' . 4.4361 30.1213 2568 0.1277 100.00 0.1641 . . 131 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4LJS _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4LJS _struct.title 'The crystal structure of a periplasmic binding protein from Veillonella parvula DSM 2008' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LJS _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text 'structural genomics, PSI-Biology, protein structure initiative, midwest center for structural genomics, MCSG, TRANSPORT PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code D1BQD8_VEIPT _struct_ref.pdbx_db_accession D1BQD8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QQVTVEDHQSTPVHIKLQPPVTIESFVRRGEPFESTYTAVPERVVAMWQNSIETIIALGEGDRIVAGMGIPDRKYVRPEY REAYDKIPYKDLKYANLESVLMMKPDLLVGWKSTFTNKMLQTPTFWQARLANVYIAESSLGAQSALTMDMEYKYIRDLGR IFNRNMEAERLIQEMQQSVAYTVAQTAHEKPPKALFIEVQGKHFRLYGHKTLAGNIGASLHADVIDTETPSISMEDVVEQ NPDVIFLIVSDGEYSQADVIMNYVLTQSGLQGVNALRNKRVHFLPLLAVYSPGIRLLDGIDIVSHGLYPNLYPEGVPDLI H ; _struct_ref.pdbx_align_begin 20 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LJS _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 324 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession D1BQD8 _struct_ref_seq.db_align_beg 20 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 340 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 20 _struct_ref_seq.pdbx_auth_seq_align_end 340 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LJS SER A 1 ? UNP D1BQD8 ? ? 'expression tag' 17 1 1 4LJS ASN A 2 ? UNP D1BQD8 ? ? 'expression tag' 18 2 1 4LJS ALA A 3 ? UNP D1BQD8 ? ? 'expression tag' 19 3 1 4LJS SER A 302 ? UNP D1BQD8 GLY 318 'cloning artifact' 318 4 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details 'Experimentally unknown. It is predicted to a monomer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 51 ? LEU A 61 ? TRP A 67 LEU A 77 1 ? 11 HELX_P HELX_P2 2 GLU A 63 ? ASP A 65 ? GLU A 79 ASP A 81 5 ? 3 HELX_P HELX_P3 3 ASP A 75 ? VAL A 79 ? ASP A 91 VAL A 95 5 ? 5 HELX_P HELX_P4 4 ARG A 80 ? GLU A 82 ? ARG A 96 GLU A 98 5 ? 3 HELX_P HELX_P5 5 TYR A 83 ? ILE A 90 ? TYR A 99 ILE A 106 1 ? 8 HELX_P HELX_P6 6 ASP A 94 ? ALA A 98 ? ASP A 110 ALA A 114 5 ? 5 HELX_P HELX_P7 7 ASN A 99 ? LYS A 107 ? ASN A 115 LYS A 123 1 ? 9 HELX_P HELX_P8 8 TRP A 114 ? PHE A 118 ? TRP A 130 PHE A 134 5 ? 5 HELX_P HELX_P9 9 THR A 125 ? ALA A 131 ? THR A 141 ALA A 147 1 ? 7 HELX_P HELX_P10 10 GLU A 140 ? LEU A 143 ? GLU A 156 LEU A 159 5 ? 4 HELX_P HELX_P11 11 THR A 150 ? PHE A 165 ? THR A 166 PHE A 181 1 ? 16 HELX_P HELX_P12 12 ARG A 167 ? THR A 189 ? ARG A 183 THR A 205 1 ? 23 HELX_P HELX_P13 13 THR A 214 ? LEU A 223 ? THR A 230 LEU A 239 1 ? 10 HELX_P HELX_P14 14 SER A 236 ? ASN A 244 ? SER A 252 ASN A 260 1 ? 9 HELX_P HELX_P15 15 ASP A 254 ? SER A 258 ? ASP A 270 SER A 274 5 ? 5 HELX_P HELX_P16 16 GLN A 259 ? THR A 269 ? GLN A 275 THR A 285 1 ? 11 HELX_P HELX_P17 17 SER A 271 ? GLY A 275 ? SER A 287 GLY A 291 5 ? 5 HELX_P HELX_P18 18 VAL A 276 ? ASN A 281 ? VAL A 292 ASN A 297 1 ? 6 HELX_P HELX_P19 19 LEU A 290 ? VAL A 292 ? LEU A 306 VAL A 308 5 ? 3 HELX_P HELX_P20 20 PRO A 295 ? ILE A 297 ? PRO A 311 ILE A 313 5 ? 3 HELX_P HELX_P21 21 ARG A 298 ? TYR A 311 ? ARG A 314 TYR A 327 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 49 C ? ? ? 1_555 A MSE 50 N ? ? A ALA 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale2 covale both ? A MSE 50 C ? ? ? 1_555 A TRP 51 N ? ? A MSE 66 A TRP 67 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A GLY 70 C ? ? ? 1_555 A MSE 71 N ? ? A GLY 86 A MSE 87 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale4 covale both ? A MSE 71 C ? ? ? 1_555 A GLY 72 N ? ? A MSE 87 A GLY 88 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale5 covale both ? A LEU 104 C ? ? ? 1_555 A MSE 105 N A ? A LEU 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale6 covale both ? A LEU 104 C ? ? ? 1_555 A MSE 105 N B ? A LEU 120 A MSE 121 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale7 covale both ? A MSE 105 C A ? ? 1_555 A MSE 106 N ? ? A MSE 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale8 covale both ? A MSE 105 C B ? ? 1_555 A MSE 106 N ? ? A MSE 121 A MSE 122 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale9 covale both ? A MSE 106 C ? ? ? 1_555 A LYS 107 N ? ? A MSE 122 A LYS 123 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale10 covale both ? A LYS 121 C ? ? ? 1_555 A MSE 122 N ? ? A LYS 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale11 covale both ? A MSE 122 C ? ? ? 1_555 A LEU 123 N ? ? A MSE 138 A LEU 139 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale12 covale both ? A THR 150 C ? ? ? 1_555 A MSE 151 N ? ? A THR 166 A MSE 167 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale13 covale both ? A MSE 151 C ? ? ? 1_555 A ASP 152 N ? ? A MSE 167 A ASP 168 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale14 covale both ? A ASP 152 C ? ? ? 1_555 A MSE 153 N ? ? A ASP 168 A MSE 169 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale15 covale both ? A MSE 153 C ? ? ? 1_555 A GLU 154 N ? ? A MSE 169 A GLU 170 1_555 ? ? ? ? ? ? ? 1.335 ? ? covale16 covale both ? A ASN 168 C ? ? ? 1_555 A MSE 169 N ? ? A ASN 184 A MSE 185 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale17 covale both ? A MSE 169 C ? ? ? 1_555 A GLU 170 N ? ? A MSE 185 A GLU 186 1_555 ? ? ? ? ? ? ? 1.329 ? ? covale18 covale both ? A GLU 177 C ? ? ? 1_555 A MSE 178 N ? ? A GLU 193 A MSE 194 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale19 covale both ? A MSE 178 C ? ? ? 1_555 A GLN 179 N ? ? A MSE 194 A GLN 195 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale20 covale both ? A SER 236 C ? ? ? 1_555 A MSE 237 N ? ? A SER 252 A MSE 253 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale21 covale both ? A MSE 237 C ? ? ? 1_555 A GLU 238 N ? ? A MSE 253 A GLU 254 1_555 ? ? ? ? ? ? ? 1.328 ? ? covale22 covale both ? A ILE 263 C ? ? ? 1_555 A MSE 264 N ? ? A ILE 279 A MSE 280 1_555 ? ? ? ? ? ? ? 1.331 ? ? covale23 covale both ? A MSE 264 C ? ? ? 1_555 A ASN 265 N ? ? A MSE 280 A ASN 281 1_555 ? ? ? ? ? ? ? 1.326 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 MSE A 50 ? . . . . MSE A 66 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 2 MSE A 71 ? . . . . MSE A 87 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 3 MSE A 105 A . . . . MSE A 121 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 4 MSE A 105 B . . . . MSE A 121 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 5 MSE A 106 ? . . . . MSE A 122 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 6 MSE A 122 ? . . . . MSE A 138 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 7 MSE A 151 ? . . . . MSE A 167 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 8 MSE A 153 ? . . . . MSE A 169 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 9 MSE A 169 ? . . . . MSE A 185 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 10 MSE A 178 ? . . . . MSE A 194 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 11 MSE A 237 ? . . . . MSE A 253 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' 12 MSE A 264 ? . . . . MSE A 280 ? 1_555 . . . . . . . MET 1 MSE Selenomethionine 'Named protein modification' # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id GLN _struct_mon_prot_cis.label_seq_id 21 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id GLN _struct_mon_prot_cis.auth_seq_id 37 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 22 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 38 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 3.54 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? C ? 3 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel C 1 2 ? anti-parallel C 2 3 ? parallel D 1 2 ? anti-parallel D 2 3 ? parallel D 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 19 ? ARG A 31 ? LYS A 35 ARG A 47 A 2 GLU A 34 ? ALA A 42 ? GLU A 50 ALA A 58 B 1 ILE A 67 ? MSE A 71 ? ILE A 83 MSE A 87 B 2 VAL A 47 ? MSE A 50 ? VAL A 63 MSE A 66 B 3 LEU A 110 ? GLY A 113 ? LEU A 126 GLY A 129 B 4 ASN A 135 ? ILE A 138 ? ASN A 151 ILE A 154 C 1 HIS A 206 ? LEU A 209 ? HIS A 222 LEU A 225 C 2 LYS A 196 ? GLN A 203 ? LYS A 212 GLN A 219 C 3 ASP A 226 ? VAL A 227 ? ASP A 242 VAL A 243 D 1 HIS A 206 ? LEU A 209 ? HIS A 222 LEU A 225 D 2 LYS A 196 ? GLN A 203 ? LYS A 212 GLN A 219 D 3 VAL A 247 ? VAL A 252 ? VAL A 263 VAL A 268 D 4 VAL A 284 ? PRO A 288 ? VAL A 300 PRO A 304 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 24 ? N VAL A 40 O TYR A 40 ? O TYR A 56 B 1 2 O ALA A 69 ? O ALA A 85 N ALA A 49 ? N ALA A 65 B 2 3 N MSE A 50 ? N MSE A 66 O VAL A 112 ? O VAL A 128 B 3 4 N LEU A 111 ? N LEU A 127 O TYR A 137 ? O TYR A 153 C 1 2 O ARG A 208 ? O ARG A 224 N GLU A 201 ? N GLU A 217 C 2 3 N ALA A 197 ? N ALA A 213 O ASP A 226 ? O ASP A 242 D 1 2 O ARG A 208 ? O ARG A 224 N GLU A 201 ? N GLU A 217 D 2 3 N LEU A 198 ? N LEU A 214 O PHE A 249 ? O PHE A 265 D 3 4 N LEU A 250 ? N LEU A 266 O HIS A 285 ? O HIS A 301 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GOL 401 ? 4 'BINDING SITE FOR RESIDUE GOL A 401' AC2 Software A PO4 402 ? 1 'BINDING SITE FOR RESIDUE PO4 A 402' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 TRP A 114 ? TRP A 130 . ? 1_555 ? 2 AC1 4 LYS A 115 ? LYS A 131 . ? 1_555 ? 3 AC1 4 SER A 116 ? SER A 132 . ? 1_555 ? 4 AC1 4 SER A 142 ? SER A 158 . ? 1_555 ? 5 AC2 1 TYR A 184 ? TYR A 200 . ? 1_555 ? # _pdbx_entry_details.entry_id 4LJS _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 TRP A 67 ? ? 75.99 156.76 2 1 PHE A 134 ? ? -113.92 58.14 3 1 MSE A 138 ? ? -135.71 -116.15 4 1 GLN A 140 ? ? 73.78 163.54 5 1 GLN A 286 ? ? -120.44 -166.92 6 1 SER A 287 ? ? -122.16 -60.74 7 1 ARG A 299 ? ? -111.01 65.02 8 1 SER A 310 ? ? 37.12 57.09 9 1 TYR A 331 ? ? -119.25 73.14 # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 50 A MSE 66 ? MET SELENOMETHIONINE 2 A MSE 71 A MSE 87 ? MET SELENOMETHIONINE 3 A MSE 105 A MSE 121 ? MET SELENOMETHIONINE 4 A MSE 106 A MSE 122 ? MET SELENOMETHIONINE 5 A MSE 122 A MSE 138 ? MET SELENOMETHIONINE 6 A MSE 151 A MSE 167 ? MET SELENOMETHIONINE 7 A MSE 153 A MSE 169 ? MET SELENOMETHIONINE 8 A MSE 169 A MSE 185 ? MET SELENOMETHIONINE 9 A MSE 178 A MSE 194 ? MET SELENOMETHIONINE 10 A MSE 237 A MSE 253 ? MET SELENOMETHIONINE 11 A MSE 264 A MSE 280 ? MET SELENOMETHIONINE # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 36.6615 25.4483 21.2532 0.3151 0.3139 0.3277 0.0259 -0.0008 -0.0742 4.2534 3.4034 4.5993 0.2483 -0.2332 0.2049 -0.0736 -0.0470 0.0406 0.2052 0.0144 -0.3956 0.0887 0.3349 0.0665 'X-RAY DIFFRACTION' 2 ? refined 25.0073 21.0707 27.2582 0.3310 0.2880 0.1903 -0.0030 0.0253 -0.0153 3.5275 5.5223 2.2509 2.3371 0.3331 0.2315 0.0550 -0.1170 -0.0971 0.4157 -0.1608 0.0477 0.3726 -0.0089 0.0920 'X-RAY DIFFRACTION' 3 ? refined 31.9296 32.9919 17.0450 0.2423 0.2040 0.2320 -0.0500 0.0346 0.0211 1.9492 6.0276 7.8988 0.2793 1.2530 5.6739 -0.1304 0.0808 0.0974 -0.2162 0.0420 -0.1087 -0.2297 0.0943 0.1077 'X-RAY DIFFRACTION' 4 ? refined 36.2779 13.2329 8.0030 0.2881 0.3616 0.3690 0.0618 0.0904 -0.0207 2.9976 3.4525 8.3882 2.6006 3.9409 4.5772 0.0712 0.0937 -0.3338 0.1481 0.1246 -0.3758 0.5109 0.5055 -0.2487 'X-RAY DIFFRACTION' 5 ? refined 15.8246 18.2629 -2.8030 0.3559 0.3213 0.3750 0.0448 -0.1092 -0.0781 6.8876 3.2545 3.5882 -0.0527 -0.4408 -0.1343 -0.1986 0.3878 0.2592 -0.6057 -0.2217 0.8041 -0.4890 -0.3875 0.3647 'X-RAY DIFFRACTION' 6 ? refined 7.2631 18.1140 -3.3804 0.4993 0.5433 0.9348 0.1962 -0.2250 -0.2479 5.7838 4.8732 4.6996 -0.0076 1.7592 0.1017 -0.5623 0.4732 0.7619 -1.1597 -0.1157 1.5532 -0.9311 -0.7075 0.5752 'X-RAY DIFFRACTION' 7 ? refined 5.9269 16.7442 13.2096 0.5670 1.0117 0.8278 0.0678 0.1546 -0.2916 7.4089 2.2708 5.2318 1.2007 2.3711 2.1229 0.2716 -1.3876 0.9157 0.5111 -0.4615 1.1854 -0.5410 -1.1849 0.3071 'X-RAY DIFFRACTION' 8 ? refined 14.4187 9.9566 4.4485 0.2855 0.3124 0.3861 0.0208 0.0308 -0.1109 3.8286 3.5885 4.6352 0.2863 -0.0917 1.0934 -0.1570 -0.0271 -0.2236 -0.2740 -0.2578 0.5723 0.1395 -0.4989 0.3196 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 24 through 91 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 92 through 119 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 120 through 170 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 171 through 205 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 206 through 248 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 249 through 268 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 269 through 282 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 283 through 339 ) ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 17 ? A SER 1 2 1 Y 1 A ASN 18 ? A ASN 2 3 1 Y 1 A ALA 19 ? A ALA 3 4 1 Y 1 A GLN 20 ? A GLN 4 5 1 Y 1 A GLN 21 ? A GLN 5 6 1 Y 1 A VAL 22 ? A VAL 6 7 1 Y 1 A THR 23 ? A THR 7 8 1 Y 1 A HIS 340 ? A HIS 324 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MSE N N N N 230 MSE CA C N S 231 MSE C C N N 232 MSE O O N N 233 MSE OXT O N N 234 MSE CB C N N 235 MSE CG C N N 236 MSE SE SE N N 237 MSE CE C N N 238 MSE H H N N 239 MSE H2 H N N 240 MSE HA H N N 241 MSE HXT H N N 242 MSE HB2 H N N 243 MSE HB3 H N N 244 MSE HG2 H N N 245 MSE HG3 H N N 246 MSE HE1 H N N 247 MSE HE2 H N N 248 MSE HE3 H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PO4 P P N N 273 PO4 O1 O N N 274 PO4 O2 O N N 275 PO4 O3 O N N 276 PO4 O4 O N N 277 PRO N N N N 278 PRO CA C N S 279 PRO C C N N 280 PRO O O N N 281 PRO CB C N N 282 PRO CG C N N 283 PRO CD C N N 284 PRO OXT O N N 285 PRO H H N N 286 PRO HA H N N 287 PRO HB2 H N N 288 PRO HB3 H N N 289 PRO HG2 H N N 290 PRO HG3 H N N 291 PRO HD2 H N N 292 PRO HD3 H N N 293 PRO HXT H N N 294 SER N N N N 295 SER CA C N S 296 SER C C N N 297 SER O O N N 298 SER CB C N N 299 SER OG O N N 300 SER OXT O N N 301 SER H H N N 302 SER H2 H N N 303 SER HA H N N 304 SER HB2 H N N 305 SER HB3 H N N 306 SER HG H N N 307 SER HXT H N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TRP N N N N 326 TRP CA C N S 327 TRP C C N N 328 TRP O O N N 329 TRP CB C N N 330 TRP CG C Y N 331 TRP CD1 C Y N 332 TRP CD2 C Y N 333 TRP NE1 N Y N 334 TRP CE2 C Y N 335 TRP CE3 C Y N 336 TRP CZ2 C Y N 337 TRP CZ3 C Y N 338 TRP CH2 C Y N 339 TRP OXT O N N 340 TRP H H N N 341 TRP H2 H N N 342 TRP HA H N N 343 TRP HB2 H N N 344 TRP HB3 H N N 345 TRP HD1 H N N 346 TRP HE1 H N N 347 TRP HE3 H N N 348 TRP HZ2 H N N 349 TRP HZ3 H N N 350 TRP HH2 H N N 351 TRP HXT H N N 352 TYR N N N N 353 TYR CA C N S 354 TYR C C N N 355 TYR O O N N 356 TYR CB C N N 357 TYR CG C Y N 358 TYR CD1 C Y N 359 TYR CD2 C Y N 360 TYR CE1 C Y N 361 TYR CE2 C Y N 362 TYR CZ C Y N 363 TYR OH O N N 364 TYR OXT O N N 365 TYR H H N N 366 TYR H2 H N N 367 TYR HA H N N 368 TYR HB2 H N N 369 TYR HB3 H N N 370 TYR HD1 H N N 371 TYR HD2 H N N 372 TYR HE1 H N N 373 TYR HE2 H N N 374 TYR HH H N N 375 TYR HXT H N N 376 VAL N N N N 377 VAL CA C N S 378 VAL C C N N 379 VAL O O N N 380 VAL CB C N N 381 VAL CG1 C N N 382 VAL CG2 C N N 383 VAL OXT O N N 384 VAL H H N N 385 VAL H2 H N N 386 VAL HA H N N 387 VAL HB H N N 388 VAL HG11 H N N 389 VAL HG12 H N N 390 VAL HG13 H N N 391 VAL HG21 H N N 392 VAL HG22 H N N 393 VAL HG23 H N N 394 VAL HXT H N N 395 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PO4 P O1 doub N N 260 PO4 P O2 sing N N 261 PO4 P O3 sing N N 262 PO4 P O4 sing N N 263 PRO N CA sing N N 264 PRO N CD sing N N 265 PRO N H sing N N 266 PRO CA C sing N N 267 PRO CA CB sing N N 268 PRO CA HA sing N N 269 PRO C O doub N N 270 PRO C OXT sing N N 271 PRO CB CG sing N N 272 PRO CB HB2 sing N N 273 PRO CB HB3 sing N N 274 PRO CG CD sing N N 275 PRO CG HG2 sing N N 276 PRO CG HG3 sing N N 277 PRO CD HD2 sing N N 278 PRO CD HD3 sing N N 279 PRO OXT HXT sing N N 280 SER N CA sing N N 281 SER N H sing N N 282 SER N H2 sing N N 283 SER CA C sing N N 284 SER CA CB sing N N 285 SER CA HA sing N N 286 SER C O doub N N 287 SER C OXT sing N N 288 SER CB OG sing N N 289 SER CB HB2 sing N N 290 SER CB HB3 sing N N 291 SER OG HG sing N N 292 SER OXT HXT sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TRP N CA sing N N 310 TRP N H sing N N 311 TRP N H2 sing N N 312 TRP CA C sing N N 313 TRP CA CB sing N N 314 TRP CA HA sing N N 315 TRP C O doub N N 316 TRP C OXT sing N N 317 TRP CB CG sing N N 318 TRP CB HB2 sing N N 319 TRP CB HB3 sing N N 320 TRP CG CD1 doub Y N 321 TRP CG CD2 sing Y N 322 TRP CD1 NE1 sing Y N 323 TRP CD1 HD1 sing N N 324 TRP CD2 CE2 doub Y N 325 TRP CD2 CE3 sing Y N 326 TRP NE1 CE2 sing Y N 327 TRP NE1 HE1 sing N N 328 TRP CE2 CZ2 sing Y N 329 TRP CE3 CZ3 doub Y N 330 TRP CE3 HE3 sing N N 331 TRP CZ2 CH2 doub Y N 332 TRP CZ2 HZ2 sing N N 333 TRP CZ3 CH2 sing Y N 334 TRP CZ3 HZ3 sing N N 335 TRP CH2 HH2 sing N N 336 TRP OXT HXT sing N N 337 TYR N CA sing N N 338 TYR N H sing N N 339 TYR N H2 sing N N 340 TYR CA C sing N N 341 TYR CA CB sing N N 342 TYR CA HA sing N N 343 TYR C O doub N N 344 TYR C OXT sing N N 345 TYR CB CG sing N N 346 TYR CB HB2 sing N N 347 TYR CB HB3 sing N N 348 TYR CG CD1 doub Y N 349 TYR CG CD2 sing Y N 350 TYR CD1 CE1 sing Y N 351 TYR CD1 HD1 sing N N 352 TYR CD2 CE2 doub Y N 353 TYR CD2 HD2 sing N N 354 TYR CE1 CZ doub Y N 355 TYR CE1 HE1 sing N N 356 TYR CE2 CZ sing Y N 357 TYR CE2 HE2 sing N N 358 TYR CZ OH sing N N 359 TYR OH HH sing N N 360 TYR OXT HXT sing N N 361 VAL N CA sing N N 362 VAL N H sing N N 363 VAL N H2 sing N N 364 VAL CA C sing N N 365 VAL CA CB sing N N 366 VAL CA HA sing N N 367 VAL C O doub N N 368 VAL C OXT sing N N 369 VAL CB CG1 sing N N 370 VAL CB CG2 sing N N 371 VAL CB HB sing N N 372 VAL CG1 HG11 sing N N 373 VAL CG1 HG12 sing N N 374 VAL CG1 HG13 sing N N 375 VAL CG2 HG21 sing N N 376 VAL CG2 HG22 sing N N 377 VAL CG2 HG23 sing N N 378 VAL OXT HXT sing N N 379 # _atom_sites.entry_id 4LJS _atom_sites.fract_transf_matrix[1][1] 0.012049 _atom_sites.fract_transf_matrix[1][2] 0.006957 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013913 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009056 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P SE # loop_