HEADER TRANSFERASE 07-JUL-13 4LK9 TITLE CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER HISTONE H3 TAIL COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE KAT6A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 194-323; COMPND 5 SYNONYM: MOZ, YBF2/SAS3, SAS2 AND TIP60 PROTEIN 3, MYST-3, MONOCYTIC COMPND 6 LEUKEMIA ZINC FINGER PROTEIN, RUNT-RELATED TRANSCRIPTION FACTOR- COMPND 7 BINDING PROTEIN 2, ZINC FINGER PROTEIN 220; COMPND 8 EC: 2.3.1.48; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: HISTONE H3.1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 2-22; COMPND 14 SYNONYM: HISTONE H3/A, HISTONE H3/B, HISTONE H3/C, HISTONE H3/D, COMPND 15 HISTONE H3/F, HISTONE H3/H, HISTONE H3/I, HISTONE H3/J HISTONE H3/K, COMPND 16 HISTONE H3/L; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAT6A, MOZ, MYST3, RUNXBP2, ZNF220; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS ZINC FINGER, PLANT HOMEODOMAIN FINGER, DOUBLE PHD FINGER, DPF, KEYWDS 2 HISTONE ACETYLTRANSFERASE, HISTONE H3, H3 TAIL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.DREVENY,S.E.DEEVES,B.YUE,D.M.HEERY REVDAT 3 28-FEB-24 4LK9 1 REMARK SEQADV LINK REVDAT 2 05-FEB-14 4LK9 1 JRNL REVDAT 1 16-OCT-13 4LK9 0 JRNL AUTH I.DREVENY,S.E.DEEVES,J.FULTON,B.YUE,M.MESSMER, JRNL AUTH 2 A.BHATTACHARYA,H.M.COLLINS,D.M.HEERY JRNL TITL THE DOUBLE PHD FINGER DOMAIN OF MOZ/MYST3 INDUCES JRNL TITL 2 ALPHA-HELICAL STRUCTURE OF THE HISTONE H3 TAIL TO FACILITATE JRNL TITL 3 ACETYLATION AND METHYLATION SAMPLING AND MODIFICATION. JRNL REF NUCLEIC ACIDS RES. V. 42 822 2014 JRNL REFN ISSN 0305-1048 JRNL PMID 24150941 JRNL DOI 10.1093/NAR/GKT931 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 31295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8887 - 3.5580 0.98 3001 157 0.1444 0.1791 REMARK 3 2 3.5580 - 2.8242 0.99 2863 158 0.1625 0.1853 REMARK 3 3 2.8242 - 2.4672 0.99 2855 144 0.1645 0.1863 REMARK 3 4 2.4672 - 2.2416 0.99 2806 156 0.1582 0.1763 REMARK 3 5 2.2416 - 2.0809 0.98 2766 143 0.1549 0.1568 REMARK 3 6 2.0809 - 1.9582 0.97 2723 148 0.1628 0.1798 REMARK 3 7 1.9582 - 1.8602 0.96 2697 141 0.1697 0.1865 REMARK 3 8 1.8602 - 1.7792 0.93 2585 148 0.1833 0.2197 REMARK 3 9 1.7792 - 1.7107 0.92 2548 132 0.2058 0.1851 REMARK 3 10 1.7107 - 1.6517 0.89 2498 140 0.2199 0.2501 REMARK 3 11 1.6517 - 1.6000 0.85 2361 125 0.2525 0.2715 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 1114 REMARK 3 ANGLE : 1.648 1477 REMARK 3 CHIRALITY : 0.116 158 REMARK 3 PLANARITY : 0.008 195 REMARK 3 DIHEDRAL : 14.760 437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 190:214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8796 46.3727 30.8713 REMARK 3 T TENSOR REMARK 3 T11: 0.1966 T22: 0.2911 REMARK 3 T33: 0.2567 T12: -0.1166 REMARK 3 T13: -0.1031 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 3.4873 L22: 0.6083 REMARK 3 L33: 0.3562 L12: 0.4176 REMARK 3 L13: 0.4852 L23: -0.0682 REMARK 3 S TENSOR REMARK 3 S11: -0.4937 S12: 0.1485 S13: 0.4376 REMARK 3 S21: 0.0709 S22: -0.0068 S23: -0.2273 REMARK 3 S31: -0.4920 S32: 0.3550 S33: 0.2703 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 215:280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9237 40.6119 32.0548 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.0683 REMARK 3 T33: 0.1093 T12: -0.0616 REMARK 3 T13: -0.0306 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 4.0439 L22: 2.9618 REMARK 3 L33: 3.6975 L12: -1.1061 REMARK 3 L13: 0.8703 L23: -0.7660 REMARK 3 S TENSOR REMARK 3 S11: -0.1624 S12: 0.1801 S13: 0.0684 REMARK 3 S21: -0.0167 S22: -0.0303 S23: 0.0156 REMARK 3 S31: 0.0716 S32: -0.0148 S33: 0.1417 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 281:315 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3697 28.0729 39.6344 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.1381 REMARK 3 T33: 0.1767 T12: -0.0073 REMARK 3 T13: -0.0481 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 3.2248 L22: 3.1976 REMARK 3 L33: 3.4134 L12: -1.7269 REMARK 3 L13: -1.1738 L23: -0.8753 REMARK 3 S TENSOR REMARK 3 S11: 0.1695 S12: -0.0299 S13: -0.3657 REMARK 3 S21: 0.0408 S22: -0.1521 S23: 0.0004 REMARK 3 S31: 0.4436 S32: 0.0416 S33: -0.0257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9785 30.1951 29.5819 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.1864 REMARK 3 T33: 0.2829 T12: -0.0837 REMARK 3 T13: -0.0683 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 3.4292 L22: 3.1438 REMARK 3 L33: 6.1576 L12: -0.2955 REMARK 3 L13: -2.9325 L23: 1.1042 REMARK 3 S TENSOR REMARK 3 S11: 0.1929 S12: 0.3705 S13: -0.6132 REMARK 3 S21: -0.6094 S22: -0.0692 S23: 0.6740 REMARK 3 S31: 0.6018 S32: -0.3913 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32766 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 57.003 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74600 REMARK 200 R SYM FOR SHELL (I) : 0.74600 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA-HEPES, 1.4 M SODIUM CITRATE, REMARK 280 PH 7.5, VAPOR DIFFUSION, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.41350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.25950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.62025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.25950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.20675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.25950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.62025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.25950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.20675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.41350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSEMBLY IS THE SAME AS ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 188 REMARK 465 SER A 189 REMARK 465 GLY A 316 REMARK 465 ARG A 317 REMARK 465 LYS A 318 REMARK 465 LEU A 319 REMARK 465 LEU A 320 REMARK 465 GLN A 321 REMARK 465 LYS A 322 REMARK 465 LYS A 323 REMARK 465 LYS B 14 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 LYS B 18 REMARK 465 GLN B 19 REMARK 465 LEU B 20 REMARK 465 ALA B 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 190 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 ARG A 313 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 315 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 506 O HOH A 607 2.06 REMARK 500 O VAL A 202 O HOH A 503 2.10 REMARK 500 O HOH A 502 O HOH A 505 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 511 O HOH A 574 4455 1.98 REMARK 500 O HOH A 565 O HOH A 574 4455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 2 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 207 34.07 -82.62 REMARK 500 GLU A 225 117.88 -164.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 209 SG REMARK 620 2 CYS A 212 SG 111.6 REMARK 620 3 HIS A 238 ND1 100.5 97.6 REMARK 620 4 CYS A 241 SG 111.9 115.0 118.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 230 SG REMARK 620 2 CYS A 233 SG 111.8 REMARK 620 3 CYS A 259 SG 109.4 114.3 REMARK 620 4 CYS A 262 SG 106.7 109.2 105.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 265 SG REMARK 620 2 CYS A 268 SG 109.6 REMARK 620 3 HIS A 289 ND1 101.7 99.5 REMARK 620 4 CYS A 292 SG 113.1 116.7 114.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 281 SG REMARK 620 2 CYS A 284 SG 105.4 REMARK 620 3 CYS A 307 SG 112.3 111.5 REMARK 620 4 CYS A 310 SG 111.4 106.4 109.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF HISTONE H3.1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LJN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER REMARK 900 RELATED ID: 4LLB RELATED DB: PDB REMARK 900 RELATED ID: 4LKA RELATED DB: PDB DBREF 4LK9 A 194 323 UNP Q92794 KAT6A_HUMAN 194 323 DBREF 4LK9 B 1 21 UNP P68431 H31_HUMAN 2 22 SEQADV 4LK9 GLY A 188 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 SER A 189 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 HIS A 190 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 MET A 191 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 LEU A 192 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 GLU A 193 UNP Q92794 EXPRESSION TAG SEQRES 1 A 136 GLY SER HIS MET LEU GLU LEU PRO HIS GLU LYS ASP LYS SEQRES 2 A 136 PRO VAL ALA GLU PRO ILE PRO ILE CYS SER PHE CYS LEU SEQRES 3 A 136 GLY THR LYS GLU GLN ASN ARG GLU LYS LYS PRO GLU GLU SEQRES 4 A 136 LEU ILE SER CYS ALA ASP CYS GLY ASN SER GLY HIS PRO SEQRES 5 A 136 SER CYS LEU LYS PHE SER PRO GLU LEU THR VAL ARG VAL SEQRES 6 A 136 LYS ALA LEU ARG TRP GLN CYS ILE GLU CYS LYS THR CYS SEQRES 7 A 136 SER SER CYS ARG ASP GLN GLY LYS ASN ALA ASP ASN MET SEQRES 8 A 136 LEU PHE CYS ASP SER CYS ASP ARG GLY PHE HIS MET GLU SEQRES 9 A 136 CYS CYS ASP PRO PRO LEU THR ARG MET PRO LYS GLY MET SEQRES 10 A 136 TRP ILE CYS GLN ILE CYS ARG PRO ARG LYS LYS GLY ARG SEQRES 11 A 136 LYS LEU LEU GLN LYS LYS SEQRES 1 B 21 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 B 21 LYS ALA PRO ARG LYS GLN LEU ALA HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *160(H2 O) HELIX 1 1 LEU A 194 ASP A 199 1 6 HELIX 2 2 HIS A 238 LYS A 243 1 6 HELIX 3 3 SER A 245 ALA A 254 1 10 HELIX 4 4 ASN A 274 ASP A 276 5 3 HELIX 5 5 GLU A 291 CYS A 293 5 3 HELIX 6 6 LYS B 4 GLY B 12 1 9 SHEET 1 A 2 ILE A 228 SER A 229 0 SHEET 2 A 2 SER A 236 GLY A 237 -1 O GLY A 237 N ILE A 228 SHEET 1 B 3 GLY A 287 HIS A 289 0 SHEET 2 B 3 MET A 278 PHE A 280 -1 N LEU A 279 O PHE A 288 SHEET 3 B 3 ARG B 2 THR B 3 -1 O ARG B 2 N PHE A 280 LINK SG CYS A 209 ZN ZN A 403 1555 1555 2.36 LINK SG CYS A 212 ZN ZN A 403 1555 1555 2.30 LINK SG CYS A 230 ZN ZN A 404 1555 1555 2.37 LINK SG CYS A 233 ZN ZN A 404 1555 1555 2.27 LINK ND1 HIS A 238 ZN ZN A 403 1555 1555 2.11 LINK SG CYS A 241 ZN ZN A 403 1555 1555 2.30 LINK SG CYS A 259 ZN ZN A 404 1555 1555 2.33 LINK SG CYS A 262 ZN ZN A 404 1555 1555 2.31 LINK SG CYS A 265 ZN ZN A 402 1555 1555 2.37 LINK SG CYS A 268 ZN ZN A 402 1555 1555 2.35 LINK SG CYS A 281 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 284 ZN ZN A 401 1555 1555 2.32 LINK ND1 HIS A 289 ZN ZN A 402 1555 1555 2.08 LINK SG CYS A 292 ZN ZN A 402 1555 1555 2.26 LINK SG CYS A 307 ZN ZN A 401 1555 1555 2.33 LINK SG CYS A 310 ZN ZN A 401 1555 1555 2.35 CISPEP 1 ASP A 294 PRO A 295 0 4.27 SITE 1 AC1 4 CYS A 281 CYS A 284 CYS A 307 CYS A 310 SITE 1 AC2 4 CYS A 265 CYS A 268 HIS A 289 CYS A 292 SITE 1 AC3 4 CYS A 209 CYS A 212 HIS A 238 CYS A 241 SITE 1 AC4 4 CYS A 230 CYS A 233 CYS A 259 CYS A 262 SITE 1 AC5 28 PHE A 211 CYS A 241 LEU A 242 LYS A 243 SITE 2 AC5 28 ILE A 260 GLU A 261 LYS A 263 GLN A 271 SITE 3 AC5 28 ALA A 275 ASP A 276 MET A 278 LEU A 279 SITE 4 AC5 28 PHE A 280 CYS A 281 ASP A 282 ASP A 285 SITE 5 AC5 28 MET A 300 GLY A 303 HOH A 527 HOH A 545 SITE 6 AC5 28 HOH A 600 HOH B 102 HOH B 103 HOH B 104 SITE 7 AC5 28 HOH B 105 HOH B 106 HOH B 107 HOH B 109 CRYST1 70.519 70.519 96.827 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010328 0.00000