HEADER TRANSFERASE 07-JUL-13 4LK9 TITLE CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER HISTONE H3 TAIL COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE ACETYLTRANSFERASE KAT6A; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 194-323; COMPND 5 SYNONYM: MOZ, YBF2/SAS3, SAS2 AND TIP60 PROTEIN 3, MYST-3, MONOCYTIC COMPND 6 LEUKEMIA ZINC FINGER PROTEIN, RUNT-RELATED TRANSCRIPTION FACTOR- COMPND 7 BINDING PROTEIN 2, ZINC FINGER PROTEIN 220; COMPND 8 EC: 2.3.1.48; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 2; COMPND 11 MOLECULE: HISTONE H3.1; COMPND 12 CHAIN: B; COMPND 13 FRAGMENT: UNP RESIDUES 2-22; COMPND 14 SYNONYM: HISTONE H3/A, HISTONE H3/B, HISTONE H3/C, HISTONE H3/D, COMPND 15 HISTONE H3/F, HISTONE H3/H, HISTONE H3/I, HISTONE H3/J HISTONE H3/K, COMPND 16 HISTONE H3/L; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KAT6A, MOZ, MYST3, RUNXBP2, ZNF220; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_COMMON: HUMAN; SOURCE 15 ORGANISM_TAXID: 9606 KEYWDS ZINC FINGER, PLANT HOMEODOMAIN FINGER, DOUBLE PHD FINGER, DPF, KEYWDS 2 HISTONE ACETYLTRANSFERASE, HISTONE H3, H3 TAIL, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR I.DREVENY,S.E.DEEVES,B.YUE,D.M.HEERY REVDAT 3 28-FEB-24 4LK9 1 REMARK SEQADV LINK REVDAT 2 05-FEB-14 4LK9 1 JRNL REVDAT 1 16-OCT-13 4LK9 0 JRNL AUTH I.DREVENY,S.E.DEEVES,J.FULTON,B.YUE,M.MESSMER, JRNL AUTH 2 A.BHATTACHARYA,H.M.COLLINS,D.M.HEERY JRNL TITL THE DOUBLE PHD FINGER DOMAIN OF MOZ/MYST3 INDUCES JRNL TITL 2 ALPHA-HELICAL STRUCTURE OF THE HISTONE H3 TAIL TO FACILITATE JRNL TITL 3 ACETYLATION AND METHYLATION SAMPLING AND MODIFICATION. JRNL REF NUCLEIC ACIDS RES. V. 42 822 2014 JRNL REFN ISSN 0305-1048 JRNL PMID 24150941 JRNL DOI 10.1093/NAR/GKT931 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.86 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.1 REMARK 3 NUMBER OF REFLECTIONS : 31295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.164 REMARK 3 FREE R VALUE : 0.186 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.090 REMARK 3 FREE R VALUE TEST SET COUNT : 1592 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8887 - 3.5580 0.98 3001 157 0.1444 0.1791 REMARK 3 2 3.5580 - 2.8242 0.99 2863 158 0.1625 0.1853 REMARK 3 3 2.8242 - 2.4672 0.99 2855 144 0.1645 0.1863 REMARK 3 4 2.4672 - 2.2416 0.99 2806 156 0.1582 0.1763 REMARK 3 5 2.2416 - 2.0809 0.98 2766 143 0.1549 0.1568 REMARK 3 6 2.0809 - 1.9582 0.97 2723 148 0.1628 0.1798 REMARK 3 7 1.9582 - 1.8602 0.96 2697 141 0.1697 0.1865 REMARK 3 8 1.8602 - 1.7792 0.93 2585 148 0.1833 0.2197 REMARK 3 9 1.7792 - 1.7107 0.92 2548 132 0.2058 0.1851 REMARK 3 10 1.7107 - 1.6517 0.89 2498 140 0.2199 0.2501 REMARK 3 11 1.6517 - 1.6000 0.85 2361 125 0.2525 0.2715 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.450 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 16.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.25 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.019 1114 REMARK 3 ANGLE : 1.648 1477 REMARK 3 CHIRALITY : 0.116 158 REMARK 3 PLANARITY : 0.008 195 REMARK 3 DIHEDRAL : 14.760 437 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 190:214 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8796 46.3727 30.8713 REMARK 3 T TENSOR REMARK 3 T11: 0.1966 T22: 0.2911 REMARK 3 T33: 0.2567 T12: -0.1166 REMARK 3 T13: -0.1031 T23: 0.1122 REMARK 3 L TENSOR REMARK 3 L11: 3.4873 L22: 0.6083 REMARK 3 L33: 0.3562 L12: 0.4176 REMARK 3 L13: 0.4852 L23: -0.0682 REMARK 3 S TENSOR REMARK 3 S11: -0.4937 S12: 0.1485 S13: 0.4376 REMARK 3 S21: 0.0709 S22: -0.0068 S23: -0.2273 REMARK 3 S31: -0.4920 S32: 0.3550 S33: 0.2703 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 215:280 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.9237 40.6119 32.0548 REMARK 3 T TENSOR REMARK 3 T11: 0.1217 T22: 0.0683 REMARK 3 T33: 0.1093 T12: -0.0616 REMARK 3 T13: -0.0306 T23: 0.0462 REMARK 3 L TENSOR REMARK 3 L11: 4.0439 L22: 2.9618 REMARK 3 L33: 3.6975 L12: -1.1061 REMARK 3 L13: 0.8703 L23: -0.7660 REMARK 3 S TENSOR REMARK 3 S11: -0.1624 S12: 0.1801 S13: 0.0684 REMARK 3 S21: -0.0167 S22: -0.0303 S23: 0.0156 REMARK 3 S31: 0.0716 S32: -0.0148 S33: 0.1417 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND ( RESID 281:315 OR RESID 401:401 ) ) REMARK 3 ORIGIN FOR THE GROUP (A): 19.3697 28.0729 39.6344 REMARK 3 T TENSOR REMARK 3 T11: 0.2203 T22: 0.1381 REMARK 3 T33: 0.1767 T12: -0.0073 REMARK 3 T13: -0.0481 T23: 0.0513 REMARK 3 L TENSOR REMARK 3 L11: 3.2248 L22: 3.1976 REMARK 3 L33: 3.4134 L12: -1.7269 REMARK 3 L13: -1.1738 L23: -0.8753 REMARK 3 S TENSOR REMARK 3 S11: 0.1695 S12: -0.0299 S13: -0.3657 REMARK 3 S21: 0.0408 S22: -0.1521 S23: 0.0004 REMARK 3 S31: 0.4436 S32: 0.0416 S33: -0.0257 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN B AND RESID 1:13 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9785 30.1951 29.5819 REMARK 3 T TENSOR REMARK 3 T11: 0.2745 T22: 0.1864 REMARK 3 T33: 0.2829 T12: -0.0837 REMARK 3 T13: -0.0683 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 3.4292 L22: 3.1438 REMARK 3 L33: 6.1576 L12: -0.2955 REMARK 3 L13: -2.9325 L23: 1.1042 REMARK 3 S TENSOR REMARK 3 S11: 0.1929 S12: 0.3705 S13: -0.6132 REMARK 3 S21: -0.6094 S22: -0.0692 S23: 0.6740 REMARK 3 S31: 0.6018 S32: -0.3913 S33: 0.0003 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LK9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080734. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32766 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 57.003 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 14.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.74600 REMARK 200 R SYM FOR SHELL (I) : 0.74600 REMARK 200 FOR SHELL : 1.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 63.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM NA-HEPES, 1.4 M SODIUM CITRATE, REMARK 280 PH 7.5, VAPOR DIFFUSION, TEMPERATURE 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.41350 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.25950 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.62025 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.25950 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.20675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.25950 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.62025 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.25950 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.25950 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.20675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.41350 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSEMBLY IS THE SAME AS ASYMMETRIC UNIT REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 8580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -3.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 188 REMARK 465 SER A 189 REMARK 465 GLY A 316 REMARK 465 ARG A 317 REMARK 465 LYS A 318 REMARK 465 LEU A 319 REMARK 465 LEU A 320 REMARK 465 GLN A 321 REMARK 465 LYS A 322 REMARK 465 LYS A 323 REMARK 465 LYS B 14 REMARK 465 ALA B 15 REMARK 465 PRO B 16 REMARK 465 ARG B 17 REMARK 465 LYS B 18 REMARK 465 GLN B 19 REMARK 465 LEU B 20 REMARK 465 ALA B 21 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 190 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 ARG A 313 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 315 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 506 O HOH A 607 2.06 REMARK 500 O VAL A 202 O HOH A 503 2.10 REMARK 500 O HOH A 502 O HOH A 505 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 511 O HOH A 574 4455 1.98 REMARK 500 O HOH A 565 O HOH A 574 4455 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 2 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 207 34.07 -82.62 REMARK 500 GLU A 225 117.88 -164.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 403 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 209 SG REMARK 620 2 CYS A 212 SG 111.6 REMARK 620 3 HIS A 238 ND1 100.5 97.6 REMARK 620 4 CYS A 241 SG 111.9 115.0 118.8 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 404 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 230 SG REMARK 620 2 CYS A 233 SG 111.8 REMARK 620 3 CYS A 259 SG 109.4 114.3 REMARK 620 4 CYS A 262 SG 106.7 109.2 105.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 265 SG REMARK 620 2 CYS A 268 SG 109.6 REMARK 620 3 HIS A 289 ND1 101.7 99.5 REMARK 620 4 CYS A 292 SG 113.1 116.7 114.5 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 281 SG REMARK 620 2 CYS A 284 SG 105.4 REMARK 620 3 CYS A 307 SG 112.3 111.5 REMARK 620 4 CYS A 310 SG 111.4 106.4 109.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR CHAIN B OF HISTONE H3.1 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LJN RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MOZ DOUBLE PHD FINGER REMARK 900 RELATED ID: 4LLB RELATED DB: PDB REMARK 900 RELATED ID: 4LKA RELATED DB: PDB DBREF 4LK9 A 194 323 UNP Q92794 KAT6A_HUMAN 194 323 DBREF 4LK9 B 1 21 UNP P68431 H31_HUMAN 2 22 SEQADV 4LK9 GLY A 188 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 SER A 189 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 HIS A 190 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 MET A 191 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 LEU A 192 UNP Q92794 EXPRESSION TAG SEQADV 4LK9 GLU A 193 UNP Q92794 EXPRESSION TAG SEQRES 1 A 136 GLY SER HIS MET LEU GLU LEU PRO HIS GLU LYS ASP LYS SEQRES 2 A 136 PRO VAL ALA GLU PRO ILE PRO ILE CYS SER PHE CYS LEU SEQRES 3 A 136 GLY THR LYS GLU GLN ASN ARG GLU LYS LYS PRO GLU GLU SEQRES 4 A 136 LEU ILE SER CYS ALA ASP CYS GLY ASN SER GLY HIS PRO SEQRES 5 A 136 SER CYS LEU LYS PHE SER PRO GLU LEU THR VAL ARG VAL SEQRES 6 A 136 LYS ALA LEU ARG TRP GLN CYS ILE GLU CYS LYS THR CYS SEQRES 7 A 136 SER SER CYS ARG ASP GLN GLY LYS ASN ALA ASP ASN MET SEQRES 8 A 136 LEU PHE CYS ASP SER CYS ASP ARG GLY PHE HIS MET GLU SEQRES 9 A 136 CYS CYS ASP PRO PRO LEU THR ARG MET PRO LYS GLY MET SEQRES 10 A 136 TRP ILE CYS GLN ILE CYS ARG PRO ARG LYS LYS GLY ARG SEQRES 11 A 136 LYS LEU LEU GLN LYS LYS SEQRES 1 B 21 ALA ARG THR LYS GLN THR ALA ARG LYS SER THR GLY GLY SEQRES 2 B 21 LYS ALA PRO ARG LYS GLN LEU ALA HET ZN A 401 1 HET ZN A 402 1 HET ZN A 403 1 HET ZN A 404 1 HETNAM ZN ZINC ION FORMUL 3 ZN 4(ZN 2+) FORMUL 7 HOH *160(H2 O) HELIX 1 1 LEU A 194 ASP A 199 1 6 HELIX 2 2 HIS A 238 LYS A 243 1 6 HELIX 3 3 SER A 245 ALA A 254 1 10 HELIX 4 4 ASN A 274 ASP A 276 5 3 HELIX 5 5 GLU A 291 CYS A 293 5 3 HELIX 6 6 LYS B 4 GLY B 12 1 9 SHEET 1 A 2 ILE A 228 SER A 229 0 SHEET 2 A 2 SER A 236 GLY A 237 -1 O GLY A 237 N ILE A 228 SHEET 1 B 3 GLY A 287 HIS A 289 0 SHEET 2 B 3 MET A 278 PHE A 280 -1 N LEU A 279 O PHE A 288 SHEET 3 B 3 ARG B 2 THR B 3 -1 O ARG B 2 N PHE A 280 LINK SG CYS A 209 ZN ZN A 403 1555 1555 2.36 LINK SG CYS A 212 ZN ZN A 403 1555 1555 2.30 LINK SG CYS A 230 ZN ZN A 404 1555 1555 2.37 LINK SG CYS A 233 ZN ZN A 404 1555 1555 2.27 LINK ND1 HIS A 238 ZN ZN A 403 1555 1555 2.11 LINK SG CYS A 241 ZN ZN A 403 1555 1555 2.30 LINK SG CYS A 259 ZN ZN A 404 1555 1555 2.33 LINK SG CYS A 262 ZN ZN A 404 1555 1555 2.31 LINK SG CYS A 265 ZN ZN A 402 1555 1555 2.37 LINK SG CYS A 268 ZN ZN A 402 1555 1555 2.35 LINK SG CYS A 281 ZN ZN A 401 1555 1555 2.36 LINK SG CYS A 284 ZN ZN A 401 1555 1555 2.32 LINK ND1 HIS A 289 ZN ZN A 402 1555 1555 2.08 LINK SG CYS A 292 ZN ZN A 402 1555 1555 2.26 LINK SG CYS A 307 ZN ZN A 401 1555 1555 2.33 LINK SG CYS A 310 ZN ZN A 401 1555 1555 2.35 CISPEP 1 ASP A 294 PRO A 295 0 4.27 SITE 1 AC1 4 CYS A 281 CYS A 284 CYS A 307 CYS A 310 SITE 1 AC2 4 CYS A 265 CYS A 268 HIS A 289 CYS A 292 SITE 1 AC3 4 CYS A 209 CYS A 212 HIS A 238 CYS A 241 SITE 1 AC4 4 CYS A 230 CYS A 233 CYS A 259 CYS A 262 SITE 1 AC5 28 PHE A 211 CYS A 241 LEU A 242 LYS A 243 SITE 2 AC5 28 ILE A 260 GLU A 261 LYS A 263 GLN A 271 SITE 3 AC5 28 ALA A 275 ASP A 276 MET A 278 LEU A 279 SITE 4 AC5 28 PHE A 280 CYS A 281 ASP A 282 ASP A 285 SITE 5 AC5 28 MET A 300 GLY A 303 HOH A 527 HOH A 545 SITE 6 AC5 28 HOH A 600 HOH B 102 HOH B 103 HOH B 104 SITE 7 AC5 28 HOH B 105 HOH B 106 HOH B 107 HOH B 109 CRYST1 70.519 70.519 96.827 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014181 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014181 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010328 0.00000 CONECT 154 1081 CONECT 177 1081 CONECT 322 1082 CONECT 341 1082 CONECT 370 1081 CONECT 392 1081 CONECT 550 1082 CONECT 573 1082 CONECT 595 1080 CONECT 613 1080 CONECT 717 1079 CONECT 737 1079 CONECT 778 1080 CONECT 804 1080 CONECT 922 1079 CONECT 945 1079 CONECT 1079 717 737 922 945 CONECT 1080 595 613 778 804 CONECT 1081 154 177 370 392 CONECT 1082 322 341 550 573 MASTER 451 0 4 6 5 0 11 6 1229 2 20 13 END