HEADER VIRAL PROTEIN 07-JUL-13 4LKK TITLE THE STRUCTURE OF HEMAGGLUTININ L226Q MUTANT (H3 NUMBERING) FROM A TITLE 2 AVIAN-ORIGIN H7N9 INFLUENZA VIRUS (A/ANHUI/1/2013) IN COMPLEX WITH TITLE 3 HUMAN RECEPTOR ANALOG 6'SLNLN COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEMAGGLUTININ; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: HEMAGGLUTININ; COMPND 7 CHAIN: B; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/ANHUI/1/2013; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 13 ORGANISM_TAXID: 11320; SOURCE 14 STRAIN: A/ANHUI/1/2013; SOURCE 15 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 16 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 18 EXPRESSION_SYSTEM_CELL_LINE: HI5; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PFASTBAC1 KEYWDS HOMOTRIMER, VIRUS ATTACHMENT, MEMBRANE FUSION, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.SHI,W.ZHANG,F.WANG,J.QI,H.SONG,Y.WU,F.GAO,Y.ZHANG,Z.FAN,W.GONG, AUTHOR 2 D.WANG,Y.SHU,Y.WANG,J.YAN,G.F.GAO REVDAT 4 16-OCT-24 4LKK 1 REMARK REVDAT 3 08-NOV-23 4LKK 1 HETSYN REVDAT 2 29-JUL-20 4LKK 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 06-NOV-13 4LKK 0 JRNL AUTH Y.SHI,W.ZHANG,F.WANG,J.QI,Y.WU,H.SONG,F.GAO,Y.BI,Y.ZHANG, JRNL AUTH 2 Z.FAN,C.QIN,H.SUN,J.LIU,J.HAYWOOD,W.LIU,W.GONG,D.WANG,Y.SHU, JRNL AUTH 3 Y.WANG,J.YAN,G.F.GAO JRNL TITL STRUCTURES AND RECEPTOR BINDING OF HEMAGGLUTININS FROM JRNL TITL 2 HUMAN-INFECTING H7N9 INFLUENZA VIRUSES JRNL REF SCIENCE V. 342 243 2013 JRNL REFN ISSN 0036-8075 JRNL PMID 24009358 JRNL DOI 10.1126/SCIENCE.1242917 REMARK 2 REMARK 2 RESOLUTION. 2.49 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.49 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.01 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.7 REMARK 3 NUMBER OF REFLECTIONS : 27268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1363 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.0214 - 5.3638 0.93 2618 115 0.2214 0.2392 REMARK 3 2 5.3638 - 4.2583 0.95 2561 139 0.1857 0.2162 REMARK 3 3 4.2583 - 3.7202 0.97 2555 149 0.2100 0.2273 REMARK 3 4 3.7202 - 3.3802 0.99 2589 149 0.2389 0.2788 REMARK 3 5 3.3802 - 3.1380 0.99 2627 135 0.2719 0.3242 REMARK 3 6 3.1380 - 2.9530 0.99 2611 140 0.2711 0.3353 REMARK 3 7 2.9530 - 2.8051 1.00 2583 145 0.2819 0.3548 REMARK 3 8 2.8051 - 2.6830 1.00 2626 141 0.3127 0.3373 REMARK 3 9 2.6830 - 2.5797 1.00 2591 135 0.3158 0.3663 REMARK 3 10 2.5797 - 2.4907 0.97 2544 115 0.3404 0.3786 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.30 REMARK 3 B_SOL : 43.37 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.410 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.040 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 56.96 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.98330 REMARK 3 B22 (A**2) : 2.98330 REMARK 3 B33 (A**2) : -5.96660 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3914 REMARK 3 ANGLE : 0.993 5284 REMARK 3 CHIRALITY : 0.201 580 REMARK 3 PLANARITY : 0.004 693 REMARK 3 DIHEDRAL : 19.292 1446 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): -15.8159 3.9028 56.8673 REMARK 3 T TENSOR REMARK 3 T11: 0.3067 T22: 0.3397 REMARK 3 T33: 0.4367 T12: 0.0055 REMARK 3 T13: 0.0391 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.8419 L22: 0.9992 REMARK 3 L33: 1.2263 L12: -0.0731 REMARK 3 L13: 0.1580 L23: -0.3760 REMARK 3 S TENSOR REMARK 3 S11: 0.0462 S12: -0.2008 S13: 0.0135 REMARK 3 S21: 0.0748 S22: 0.0142 S23: 0.0768 REMARK 3 S31: 0.0514 S32: -0.1283 S33: -0.0508 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LKK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080745. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27271 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.491 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4DJ6 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 16%(W/V) POLYETHYLENE GLYCOL 3350, REMARK 280 0.2M LITHIUM SULFATE, 0.1M TRIS, PH 8.5, VAPOR DIFFUSION, REMARK 280 SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 58.57150 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.81627 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 99.22133 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 58.57150 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.81627 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 99.22133 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 58.57150 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.81627 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 99.22133 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 58.57150 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 33.81627 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 99.22133 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 58.57150 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 33.81627 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 99.22133 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 58.57150 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 33.81627 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 99.22133 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 67.63254 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 198.44267 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 67.63254 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 198.44267 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 67.63254 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 198.44267 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 67.63254 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 198.44267 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 67.63254 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 198.44267 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 67.63254 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 198.44267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 36170 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 56920 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 730 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 740 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 601 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 623 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 630 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 632 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 634 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 231 C2 NAG A 602 1.61 REMARK 500 SG CYS B 465 CB CYS B 469 1.77 REMARK 500 O4 NAG B 501 O HOH B 631 1.83 REMARK 500 ND2 ASN A 28 C2 NAG A 601 1.90 REMARK 500 O HOH B 620 O HOH B 625 1.93 REMARK 500 O HOH A 738 O HOH A 742 1.95 REMARK 500 OE1 GLN A 182 O HOH A 713 2.02 REMARK 500 N PHE A 92 O HOH A 752 2.08 REMARK 500 OD1 ASP B 388 O HOH B 611 2.11 REMARK 500 O HOH B 622 O HOH B 629 2.14 REMARK 500 O HOH B 620 O HOH B 631 2.18 REMARK 500 OD1 ASN A 17 O HOH A 760 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 39 41.43 -80.94 REMARK 500 GLU A 71 41.31 -144.67 REMARK 500 CYS A 87 -68.06 -102.14 REMARK 500 THR A 122 -14.22 -152.56 REMARK 500 ARG A 131 -101.15 -128.96 REMARK 500 SER A 132 -74.26 -58.65 REMARK 500 SER A 135 -155.54 -135.03 REMARK 500 ASP A 148 5.46 -65.47 REMARK 500 ASN A 149 -91.12 -140.51 REMARK 500 ALA A 150 -160.34 55.27 REMARK 500 GLN A 154 106.55 -56.89 REMARK 500 SER A 198 63.50 -68.82 REMARK 500 ASN A 199 -37.46 168.78 REMARK 500 GLN A 201 96.87 -165.42 REMARK 500 SER A 207 80.55 -150.72 REMARK 500 ASN A 231 -7.60 62.38 REMARK 500 ASN A 239 14.54 -159.21 REMARK 500 ALA B 326 -73.97 -108.03 REMARK 500 ALA B 328 18.16 56.40 REMARK 500 GLN B 351 41.48 -78.83 REMARK 500 GLU B 353 -159.20 -131.04 REMARK 500 ALA B 356 -164.84 -119.75 REMARK 500 TYR B 440 -73.26 -38.50 REMARK 500 GLU B 441 -1.64 -53.10 REMARK 500 ARG B 448 -87.57 -44.14 REMARK 500 PHE B 462 30.18 -95.85 REMARK 500 HIS B 463 51.18 -152.43 REMARK 500 LYS B 464 79.26 23.33 REMARK 500 ASP B 467 6.46 -65.01 REMARK 500 THR B 477 -11.79 -145.21 REMARK 500 HIS B 480 35.19 -86.90 REMARK 500 SER B 481 -51.32 -166.43 REMARK 500 LYS B 482 51.66 -69.74 REMARK 500 TYR B 483 -11.96 -176.97 REMARK 500 ARG B 484 -84.85 -56.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LKG RELATED DB: PDB REMARK 900 RELATED ID: 4LKH RELATED DB: PDB REMARK 900 RELATED ID: 4LKI RELATED DB: PDB REMARK 900 RELATED ID: 4LKJ RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DATABASE REFERENCES FOR THIS PROTEIN WHICH DERIVED REMARK 999 FROM STRAIN A/ANHUI/1/2013 DOES NOT CURRENTLY EXIST. DBREF 4LKK A 3 316 PDB 4LKK 4LKK 3 316 DBREF 4LKK B 323 490 PDB 4LKK 4LKK 323 490 SEQRES 1 A 314 ILE CYS LEU GLY HIS HIS ALA VAL SER ASN GLY THR LYS SEQRES 2 A 314 VAL ASN THR LEU THR GLU ARG GLY VAL GLU VAL VAL ASN SEQRES 3 A 314 ALA THR GLU THR VAL GLU ARG THR ASN ILE PRO ARG ILE SEQRES 4 A 314 CYS SER LYS GLY LYS ARG THR VAL ASP LEU GLY GLN CYS SEQRES 5 A 314 GLY LEU LEU GLY THR ILE THR GLY PRO PRO GLN CYS ASP SEQRES 6 A 314 GLN PHE LEU GLU PHE SER ALA ASP LEU ILE ILE GLU ARG SEQRES 7 A 314 ARG GLU GLY SER ASP VAL CYS TYR PRO GLY LYS PHE VAL SEQRES 8 A 314 ASN GLU GLU ALA LEU ARG GLN ILE LEU ARG GLU SER GLY SEQRES 9 A 314 GLY ILE ASP LYS GLU ALA MET GLY PHE THR TYR SER GLY SEQRES 10 A 314 ILE ARG THR ASN GLY ALA THR SER ALA CYS ARG ARG SER SEQRES 11 A 314 GLY SER SER PHE TYR ALA GLU MET LYS TRP LEU LEU SER SEQRES 12 A 314 ASN THR ASP ASN ALA ALA PHE PRO GLN MET THR LYS SER SEQRES 13 A 314 TYR LYS ASN THR ARG LYS SER PRO ALA LEU ILE VAL TRP SEQRES 14 A 314 GLY ILE HIS HIS SER VAL SER THR ALA GLU GLN THR LYS SEQRES 15 A 314 LEU TYR GLY SER GLY ASN LYS LEU VAL THR VAL GLY SER SEQRES 16 A 314 SER ASN TYR GLN GLN SER PHE VAL PRO SER PRO GLY ALA SEQRES 17 A 314 ARG PRO GLN VAL ASN GLY GLN SER GLY ARG ILE ASP PHE SEQRES 18 A 314 HIS TRP LEU MET LEU ASN PRO ASN ASP THR VAL THR PHE SEQRES 19 A 314 SER PHE ASN GLY ALA PHE ILE ALA PRO ASP ARG ALA SER SEQRES 20 A 314 PHE LEU ARG GLY LYS SER MET GLY ILE GLN SER GLY VAL SEQRES 21 A 314 GLN VAL ASP ALA ASN CYS GLU GLY ASP CYS TYR HIS SER SEQRES 22 A 314 GLY GLY THR ILE ILE SER ASN LEU PRO PHE GLN ASN ILE SEQRES 23 A 314 ASP SER ARG ALA VAL GLY LYS CYS PRO ARG TYR VAL LYS SEQRES 24 A 314 GLN ARG SER LEU LEU LEU ALA THR GLY MET LYS ASN VAL SEQRES 25 A 314 PRO GLU SEQRES 1 B 168 LEU PHE GLY ALA ILE ALA GLY PHE ILE GLU ASN GLY TRP SEQRES 2 B 168 GLU GLY LEU ILE ASP GLY TRP TYR GLY PHE ARG HIS GLN SEQRES 3 B 168 ASN ALA GLN GLY GLU GLY THR ALA ALA ASP TYR LYS SER SEQRES 4 B 168 THR GLN SER ALA ILE ASP GLN ILE THR GLY LYS LEU ASN SEQRES 5 B 168 ARG LEU ILE GLU LYS THR ASN GLN GLN PHE GLU LEU ILE SEQRES 6 B 168 ASP ASN GLU PHE ASN GLU VAL GLU LYS GLN ILE GLY ASN SEQRES 7 B 168 VAL ILE ASN TRP THR ARG ASP SER ILE THR GLU VAL TRP SEQRES 8 B 168 SER TYR ASN ALA GLU LEU LEU VAL ALA MET GLU ASN GLN SEQRES 9 B 168 HIS THR ILE ASP LEU ALA ASP SER GLU MET ASP LYS LEU SEQRES 10 B 168 TYR GLU ARG VAL LYS ARG GLN LEU ARG GLU ASN ALA GLU SEQRES 11 B 168 GLU ASP GLY THR GLY CYS PHE GLU ILE PHE HIS LYS CYS SEQRES 12 B 168 ASP ASP ASP CYS MET ALA SER ILE ARG ASN ASN THR TYR SEQRES 13 B 168 ASP HIS SER LYS TYR ARG GLU GLU ALA MET GLN ASN MODRES 4LKK ASN B 403 ASN GLYCOSYLATION SITE MODRES 4LKK ASN A 231 ASN GLYCOSYLATION SITE MODRES 4LKK ASN A 28 ASN GLYCOSYLATION SITE HET GAL C 1 12 HET SIA C 2 20 HET NAG A 601 14 HET NAG A 602 14 HET NAG B 501 14 HETNAM GAL BETA-D-GALACTOPYRANOSE HETNAM SIA N-ACETYL-ALPHA-NEURAMINIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN GAL BETA-D-GALACTOSE; D-GALACTOSE; GALACTOSE HETSYN SIA N-ACETYLNEURAMINIC ACID; SIALIC ACID; ALPHA-SIALIC HETSYN 2 SIA ACID; O-SIALIC ACID HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 GAL C6 H12 O6 FORMUL 3 SIA C11 H19 N O9 FORMUL 4 NAG 3(C8 H15 N O6) FORMUL 7 HOH *113(H2 O) HELIX 1 1 LEU A 57 GLY A 62 1 6 HELIX 2 2 PRO A 63 ASP A 67 5 5 HELIX 3 3 ASN A 94 GLU A 104 1 11 HELIX 4 4 SER A 178 GLY A 187 1 10 HELIX 5 5 ASP B 358 ILE B 377 1 20 HELIX 6 6 GLU B 395 LYS B 444 1 50 HELIX 7 7 ASP B 468 ASN B 475 1 8 HELIX 8 8 TYR B 483 GLN B 489 1 7 SHEET 1 A 2 THR A 14 ASN A 17 0 SHEET 2 A 2 ARG A 22 VAL A 26 -1 O VAL A 26 N THR A 14 SHEET 1 B 2 ALA A 29 GLU A 31 0 SHEET 2 B 2 LEU A 306 ALA A 308 -1 O LEU A 307 N THR A 30 SHEET 1 C 3 VAL A 33 GLU A 34 0 SHEET 2 C 3 PHE A 285 GLN A 286 1 O PHE A 285 N GLU A 34 SHEET 3 C 3 ARG A 298 TYR A 299 1 O ARG A 298 N GLN A 286 SHEET 1 D 2 ILE A 41 CYS A 42 0 SHEET 2 D 2 VAL A 264 ASP A 265 1 O ASP A 265 N ILE A 41 SHEET 1 E 3 THR A 48 ASP A 50 0 SHEET 2 E 3 LEU A 76 GLU A 79 1 O ILE A 78 N VAL A 49 SHEET 3 E 3 MET A 256 GLN A 259 1 O ILE A 258 N GLU A 79 SHEET 1 F 5 GLY A 90 PHE A 92 0 SHEET 2 F 5 ARG A 220 LEU A 228 1 O PHE A 223 N LYS A 91 SHEET 3 F 5 ALA A 167 HIS A 175 -1 N ILE A 173 O ASP A 222 SHEET 4 F 5 PHE A 242 PRO A 245 -1 O ILE A 243 N GLY A 172 SHEET 5 F 5 MET A 140 TRP A 142 -1 N LYS A 141 O ALA A 244 SHEET 1 G 2 ILE A 108 ALA A 112 0 SHEET 2 G 2 ARG A 247 LEU A 251 -1 O ALA A 248 N GLU A 111 SHEET 1 H 2 THR A 126 ARG A 130 0 SHEET 2 H 2 SER A 134 SER A 135 -1 O SER A 135 N CYS A 129 SHEET 1 I 4 MET A 155 LYS A 160 0 SHEET 2 I 4 THR A 233 PHE A 238 -1 O PHE A 236 N LYS A 157 SHEET 3 I 4 VAL A 193 SER A 197 -1 N THR A 194 O SER A 237 SHEET 4 I 4 TYR A 200 PHE A 204 -1 O PHE A 204 N VAL A 193 SHEET 1 J 3 GLY A 277 THR A 278 0 SHEET 2 J 3 CYS A 272 HIS A 274 -1 N HIS A 274 O GLY A 277 SHEET 3 J 3 VAL A 293 GLY A 294 -1 O VAL A 293 N TYR A 273 SHEET 1 K 2 ALA B 451 GLU B 453 0 SHEET 2 K 2 PHE B 459 ILE B 461 -1 O GLU B 460 N GLU B 452 SSBOND 1 CYS A 4 CYS B 458 1555 1555 2.03 SSBOND 2 CYS A 42 CYS A 268 1555 1555 2.04 SSBOND 3 CYS A 54 CYS A 66 1555 1555 2.06 SSBOND 4 CYS A 87 CYS A 129 1555 1555 2.04 SSBOND 5 CYS A 272 CYS A 296 1555 1555 2.05 SSBOND 6 CYS B 465 CYS B 469 1555 1555 2.03 LINK ND2 ASN A 28 C1 NAG A 601 1555 1555 1.44 LINK ND2 ASN A 231 C1 NAG A 602 1555 1555 1.44 LINK ND2 ASN B 403 C1 NAG B 501 1555 1555 1.44 LINK O6 GAL C 1 C2 SIA C 2 1555 1555 1.44 CRYST1 117.143 117.143 297.664 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008537 0.004929 0.000000 0.00000 SCALE2 0.000000 0.009857 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003359 0.00000