data_4LM7 # _entry.id 4LM7 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LM7 pdb_00004lm7 10.2210/pdb4lm7/pdb RCSB RCSB080804 ? ? WWPDB D_1000080804 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4LM9 . unspecified PDB 4LMC . unspecified PDB 4LMT . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LM7 _pdbx_database_status.recvd_initial_deposition_date 2013-07-10 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lin, S.Y.' 1 'Liu, C.L.' 2 'Hou, M.H.' 3 # _citation.id primary _citation.title 'Structural basis for the identification of the N-terminal domain of coronavirus nucleocapsid protein as an antiviral target' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 57 _citation.page_first 2247 _citation.page_last 2257 _citation.year 2014 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24564608 _citation.pdbx_database_id_DOI 10.1021/jm500089r # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lin, S.Y.' 1 ? primary 'Liu, C.L.' 2 ? primary 'Chang, Y.M.' 3 ? primary 'Zhao, J.' 4 ? primary 'Perlman, S.' 5 ? primary 'Hou, M.H.' 6 ? # _cell.entry_id 4LM7 _cell.length_a 81.940 _cell.length_b 81.940 _cell.length_c 42.820 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 6 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LM7 _symmetry.space_group_name_H-M 'P 65' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 170 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Nucleoprotein 15437.901 1 ? ? 'UNP residues 55-188' ? 2 non-polymer syn "URIDINE-5'-MONOPHOSPHATE" 324.181 1 ? ? ? ? 3 water nat water 18.015 165 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;EFNVVPYYSWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPHAK DQYGTDIDGVYWVASNQADVNTPADIVDRDPSSDEAIPTRFPPGTVLPQGYYIEGS ; _entity_poly.pdbx_seq_one_letter_code_can ;EFNVVPYYSWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPHAK DQYGTDIDGVYWVASNQADVNTPADIVDRDPSSDEAIPTRFPPGTVLPQGYYIEGS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLU n 1 2 PHE n 1 3 ASN n 1 4 VAL n 1 5 VAL n 1 6 PRO n 1 7 TYR n 1 8 TYR n 1 9 SER n 1 10 TRP n 1 11 PHE n 1 12 SER n 1 13 GLY n 1 14 ILE n 1 15 THR n 1 16 GLN n 1 17 PHE n 1 18 GLN n 1 19 LYS n 1 20 GLY n 1 21 LYS n 1 22 GLU n 1 23 PHE n 1 24 GLU n 1 25 PHE n 1 26 VAL n 1 27 GLU n 1 28 GLY n 1 29 GLN n 1 30 GLY n 1 31 VAL n 1 32 PRO n 1 33 ILE n 1 34 ALA n 1 35 PRO n 1 36 GLY n 1 37 VAL n 1 38 PRO n 1 39 ALA n 1 40 THR n 1 41 GLU n 1 42 ALA n 1 43 LYS n 1 44 GLY n 1 45 TYR n 1 46 TRP n 1 47 TYR n 1 48 ARG n 1 49 HIS n 1 50 ASN n 1 51 ARG n 1 52 ARG n 1 53 SER n 1 54 PHE n 1 55 LYS n 1 56 THR n 1 57 ALA n 1 58 ASP n 1 59 GLY n 1 60 ASN n 1 61 GLN n 1 62 ARG n 1 63 GLN n 1 64 LEU n 1 65 LEU n 1 66 PRO n 1 67 ARG n 1 68 TRP n 1 69 TYR n 1 70 PHE n 1 71 TYR n 1 72 TYR n 1 73 LEU n 1 74 GLY n 1 75 THR n 1 76 GLY n 1 77 PRO n 1 78 HIS n 1 79 ALA n 1 80 LYS n 1 81 ASP n 1 82 GLN n 1 83 TYR n 1 84 GLY n 1 85 THR n 1 86 ASP n 1 87 ILE n 1 88 ASP n 1 89 GLY n 1 90 VAL n 1 91 TYR n 1 92 TRP n 1 93 VAL n 1 94 ALA n 1 95 SER n 1 96 ASN n 1 97 GLN n 1 98 ALA n 1 99 ASP n 1 100 VAL n 1 101 ASN n 1 102 THR n 1 103 PRO n 1 104 ALA n 1 105 ASP n 1 106 ILE n 1 107 VAL n 1 108 ASP n 1 109 ARG n 1 110 ASP n 1 111 PRO n 1 112 SER n 1 113 SER n 1 114 ASP n 1 115 GLU n 1 116 ALA n 1 117 ILE n 1 118 PRO n 1 119 THR n 1 120 ARG n 1 121 PHE n 1 122 PRO n 1 123 PRO n 1 124 GLY n 1 125 THR n 1 126 VAL n 1 127 LEU n 1 128 PRO n 1 129 GLN n 1 130 GLY n 1 131 TYR n 1 132 TYR n 1 133 ILE n 1 134 GLU n 1 135 GLY n 1 136 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HCoV-OC43 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene N _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain OC43 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human coronavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 31631 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q6SA23_CVHOC _struct_ref.pdbx_db_accession Q6SA23 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NVVPYYSWFSGITQFQKGKEFEFVEGQGVPIAPGVPATEAKGYWYRHNRRSFKTADGNQRQLLPRWYFYYLGTGPHAKDQ YGTDIDGVYWVASNQADVNTPADIVDRDPSSDEAIPTRFPPGTVLPQGYYIEGS ; _struct_ref.pdbx_align_begin 55 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4LM7 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 136 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q6SA23 _struct_ref_seq.db_align_beg 55 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 188 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 58 _struct_ref_seq.pdbx_auth_seq_align_end 191 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LM7 GLU A 1 ? UNP Q6SA23 ? ? 'expression tag' 56 1 1 4LM7 PHE A 2 ? UNP Q6SA23 ? ? 'expression tag' 57 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U5P non-polymer . "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4LM7 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.69 _exptl_crystal.density_percent_sol 54.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-12-12 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'LN2-Cooled, Fixed-Exit Double Crystal Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13B1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13B1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.entry_id 4LM7 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 30 _reflns.d_resolution_high 1.72 _reflns.number_obs 122776 _reflns.number_all 122776 _reflns.percent_possible_obs 98.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.72 _reflns_shell.d_res_low 1.78 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4LM7 _refine.ls_number_reflns_obs 17396 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 22.730 _refine.ls_d_res_high 1.720 _refine.ls_percent_reflns_obs 98.84 _refine.ls_R_factor_obs 0.2271 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2246 _refine.ls_R_factor_R_free 0.2545 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 8.07 _refine.ls_number_reflns_R_free 1404 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 29.5923 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 4J3K _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RAMDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.overall_FOM_work_R_set 0.8053 _refine.B_iso_max 78.210 _refine.B_iso_min 12.820 _refine.pdbx_overall_phase_error 26.3700 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1071 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 21 _refine_hist.number_atoms_solvent 165 _refine_hist.number_atoms_total 1257 _refine_hist.d_res_high 1.720 _refine_hist.d_res_low 22.730 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' f_bond_d 1133 0.017 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1552 1.720 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 151 0.105 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 205 0.009 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 397 15.354 ? ? ? # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.pdbx_refine_id _refine_ls_shell.redundancy_reflns_obs 1.7200 1.7815 10 100.0000 1639 . 0.2623 0.3107 . 139 . 1778 . 'X-RAY DIFFRACTION' . 1.7815 1.8528 10 100.0000 1601 . 0.2777 0.2803 . 141 . 1742 . 'X-RAY DIFFRACTION' . 1.8528 1.9371 10 100.0000 1583 . 0.2663 0.2938 . 139 . 1722 . 'X-RAY DIFFRACTION' . 1.9371 2.0391 10 100.0000 1610 . 0.2493 0.2568 . 145 . 1755 . 'X-RAY DIFFRACTION' . 2.0391 2.1668 10 100.0000 1596 . 0.2433 0.2805 . 139 . 1735 . 'X-RAY DIFFRACTION' . 2.1668 2.3339 10 100.0000 1620 . 0.2320 0.2749 . 147 . 1767 . 'X-RAY DIFFRACTION' . 2.3339 2.5685 10 100.0000 1621 . 0.2293 0.2812 . 147 . 1768 . 'X-RAY DIFFRACTION' . 2.5685 2.9395 10 100.0000 1601 . 0.2162 0.2411 . 139 . 1740 . 'X-RAY DIFFRACTION' . 2.9395 3.7009 10 99.0000 1633 . 0.2023 0.2370 . 140 . 1773 . 'X-RAY DIFFRACTION' . 3.7009 22.7323 10 89.0000 1488 . 0.2152 0.2354 . 128 . 1616 . 'X-RAY DIFFRACTION' . # _struct.entry_id 4LM7 _struct.title 'Crystal structure of HCoV-OC43 N-NTD complexed with UMP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LM7 _struct_keywords.pdbx_keywords 'RNA BINDING PROTEIN' _struct_keywords.text 'Nucleocapsid protein, N-terminal domain, RNA binding, RNA BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 38 ? GLU A 41 ? PRO A 93 GLU A 96 5 ? 4 HELX_P HELX_P2 2 THR A 75 ? ALA A 79 ? THR A 130 ALA A 134 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 90 ? ALA A 94 ? VAL A 145 ALA A 149 A 2 LYS A 43 ? HIS A 49 ? LYS A 98 HIS A 104 A 3 ARG A 67 ? TYR A 72 ? ARG A 122 TYR A 127 A 4 ILE A 14 ? GLN A 16 ? ILE A 69 GLN A 71 A 5 TYR A 131 ? ILE A 133 ? TYR A 186 ILE A 188 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O TYR A 91 ? O TYR A 146 N TRP A 46 ? N TRP A 101 A 2 3 N TYR A 45 ? N TYR A 100 O TYR A 71 ? O TYR A 126 A 3 4 O TRP A 68 ? O TRP A 123 N ILE A 14 ? N ILE A 69 A 4 5 N THR A 15 ? N THR A 70 O TYR A 132 ? O TYR A 187 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id U5P _struct_site.pdbx_auth_seq_id 201 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 14 _struct_site.details 'BINDING SITE FOR RESIDUE U5P A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 PHE A 2 ? PHE A 57 . ? 1_555 ? 2 AC1 14 PRO A 6 ? PRO A 61 . ? 1_555 ? 3 AC1 14 TYR A 7 ? TYR A 62 . ? 1_555 ? 4 AC1 14 SER A 9 ? SER A 64 . ? 1_555 ? 5 AC1 14 PHE A 11 ? PHE A 66 . ? 1_555 ? 6 AC1 14 SER A 12 ? SER A 67 . ? 1_555 ? 7 AC1 14 GLY A 13 ? GLY A 68 . ? 1_555 ? 8 AC1 14 ARG A 67 ? ARG A 122 . ? 1_555 ? 9 AC1 14 TYR A 69 ? TYR A 124 . ? 1_555 ? 10 AC1 14 TYR A 71 ? TYR A 126 . ? 1_555 ? 11 AC1 14 ARG A 109 ? ARG A 164 . ? 1_555 ? 12 AC1 14 ALA A 116 ? ALA A 171 . ? 1_555 ? 13 AC1 14 GLU A 134 ? GLU A 189 . ? 1_555 ? 14 AC1 14 HOH C . ? HOH A 398 . ? 1_555 ? # _database_PDB_matrix.entry_id 4LM7 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4LM7 _atom_sites.fract_transf_matrix[1][1] 0.012204 _atom_sites.fract_transf_matrix[1][2] 0.007046 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014092 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.023354 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLU 1 56 56 GLU GLU A . n A 1 2 PHE 2 57 57 PHE PHE A . n A 1 3 ASN 3 58 58 ASN ASN A . n A 1 4 VAL 4 59 59 VAL VAL A . n A 1 5 VAL 5 60 60 VAL VAL A . n A 1 6 PRO 6 61 61 PRO PRO A . n A 1 7 TYR 7 62 62 TYR TYR A . n A 1 8 TYR 8 63 63 TYR TYR A . n A 1 9 SER 9 64 64 SER SER A . n A 1 10 TRP 10 65 65 TRP TRP A . n A 1 11 PHE 11 66 66 PHE PHE A . n A 1 12 SER 12 67 67 SER SER A . n A 1 13 GLY 13 68 68 GLY GLY A . n A 1 14 ILE 14 69 69 ILE ILE A . n A 1 15 THR 15 70 70 THR THR A . n A 1 16 GLN 16 71 71 GLN GLN A . n A 1 17 PHE 17 72 72 PHE PHE A . n A 1 18 GLN 18 73 73 GLN GLN A . n A 1 19 LYS 19 74 74 LYS LYS A . n A 1 20 GLY 20 75 75 GLY GLY A . n A 1 21 LYS 21 76 76 LYS LYS A . n A 1 22 GLU 22 77 77 GLU GLU A . n A 1 23 PHE 23 78 78 PHE PHE A . n A 1 24 GLU 24 79 79 GLU GLU A . n A 1 25 PHE 25 80 80 PHE PHE A . n A 1 26 VAL 26 81 81 VAL VAL A . n A 1 27 GLU 27 82 82 GLU GLU A . n A 1 28 GLY 28 83 83 GLY GLY A . n A 1 29 GLN 29 84 84 GLN GLN A . n A 1 30 GLY 30 85 85 GLY GLY A . n A 1 31 VAL 31 86 86 VAL VAL A . n A 1 32 PRO 32 87 87 PRO PRO A . n A 1 33 ILE 33 88 88 ILE ILE A . n A 1 34 ALA 34 89 89 ALA ALA A . n A 1 35 PRO 35 90 90 PRO PRO A . n A 1 36 GLY 36 91 91 GLY GLY A . n A 1 37 VAL 37 92 92 VAL VAL A . n A 1 38 PRO 38 93 93 PRO PRO A . n A 1 39 ALA 39 94 94 ALA ALA A . n A 1 40 THR 40 95 95 THR THR A . n A 1 41 GLU 41 96 96 GLU GLU A . n A 1 42 ALA 42 97 97 ALA ALA A . n A 1 43 LYS 43 98 98 LYS LYS A . n A 1 44 GLY 44 99 99 GLY GLY A . n A 1 45 TYR 45 100 100 TYR TYR A . n A 1 46 TRP 46 101 101 TRP TRP A . n A 1 47 TYR 47 102 102 TYR TYR A . n A 1 48 ARG 48 103 103 ARG ARG A . n A 1 49 HIS 49 104 104 HIS HIS A . n A 1 50 ASN 50 105 105 ASN ASN A . n A 1 51 ARG 51 106 106 ARG ARG A . n A 1 52 ARG 52 107 107 ARG ARG A . n A 1 53 SER 53 108 108 SER SER A . n A 1 54 PHE 54 109 109 PHE PHE A . n A 1 55 LYS 55 110 110 LYS LYS A . n A 1 56 THR 56 111 111 THR THR A . n A 1 57 ALA 57 112 112 ALA ALA A . n A 1 58 ASP 58 113 113 ASP ASP A . n A 1 59 GLY 59 114 114 GLY GLY A . n A 1 60 ASN 60 115 ? ? ? A . n A 1 61 GLN 61 116 ? ? ? A . n A 1 62 ARG 62 117 ? ? ? A . n A 1 63 GLN 63 118 118 GLN GLN A . n A 1 64 LEU 64 119 119 LEU LEU A . n A 1 65 LEU 65 120 120 LEU LEU A . n A 1 66 PRO 66 121 121 PRO PRO A . n A 1 67 ARG 67 122 122 ARG ARG A . n A 1 68 TRP 68 123 123 TRP TRP A . n A 1 69 TYR 69 124 124 TYR TYR A . n A 1 70 PHE 70 125 125 PHE PHE A . n A 1 71 TYR 71 126 126 TYR TYR A . n A 1 72 TYR 72 127 127 TYR TYR A . n A 1 73 LEU 73 128 128 LEU LEU A . n A 1 74 GLY 74 129 129 GLY GLY A . n A 1 75 THR 75 130 130 THR THR A . n A 1 76 GLY 76 131 131 GLY GLY A . n A 1 77 PRO 77 132 132 PRO PRO A . n A 1 78 HIS 78 133 133 HIS HIS A . n A 1 79 ALA 79 134 134 ALA ALA A . n A 1 80 LYS 80 135 135 LYS LYS A . n A 1 81 ASP 81 136 136 ASP ASP A . n A 1 82 GLN 82 137 137 GLN GLN A . n A 1 83 TYR 83 138 138 TYR TYR A . n A 1 84 GLY 84 139 139 GLY GLY A . n A 1 85 THR 85 140 140 THR THR A . n A 1 86 ASP 86 141 141 ASP ASP A . n A 1 87 ILE 87 142 142 ILE ILE A . n A 1 88 ASP 88 143 143 ASP ASP A . n A 1 89 GLY 89 144 144 GLY GLY A . n A 1 90 VAL 90 145 145 VAL VAL A . n A 1 91 TYR 91 146 146 TYR TYR A . n A 1 92 TRP 92 147 147 TRP TRP A . n A 1 93 VAL 93 148 148 VAL VAL A . n A 1 94 ALA 94 149 149 ALA ALA A . n A 1 95 SER 95 150 150 SER SER A . n A 1 96 ASN 96 151 151 ASN ASN A . n A 1 97 GLN 97 152 152 GLN GLN A . n A 1 98 ALA 98 153 153 ALA ALA A . n A 1 99 ASP 99 154 154 ASP ASP A . n A 1 100 VAL 100 155 155 VAL VAL A . n A 1 101 ASN 101 156 156 ASN ASN A . n A 1 102 THR 102 157 157 THR THR A . n A 1 103 PRO 103 158 158 PRO PRO A . n A 1 104 ALA 104 159 159 ALA ALA A . n A 1 105 ASP 105 160 160 ASP ASP A . n A 1 106 ILE 106 161 161 ILE ILE A . n A 1 107 VAL 107 162 162 VAL VAL A . n A 1 108 ASP 108 163 163 ASP ASP A . n A 1 109 ARG 109 164 164 ARG ARG A . n A 1 110 ASP 110 165 165 ASP ASP A . n A 1 111 PRO 111 166 166 PRO PRO A . n A 1 112 SER 112 167 167 SER SER A . n A 1 113 SER 113 168 168 SER SER A . n A 1 114 ASP 114 169 169 ASP ASP A . n A 1 115 GLU 115 170 170 GLU GLU A . n A 1 116 ALA 116 171 171 ALA ALA A . n A 1 117 ILE 117 172 172 ILE ILE A . n A 1 118 PRO 118 173 173 PRO PRO A . n A 1 119 THR 119 174 174 THR THR A . n A 1 120 ARG 120 175 175 ARG ARG A . n A 1 121 PHE 121 176 176 PHE PHE A . n A 1 122 PRO 122 177 177 PRO PRO A . n A 1 123 PRO 123 178 178 PRO PRO A . n A 1 124 GLY 124 179 179 GLY GLY A . n A 1 125 THR 125 180 180 THR THR A . n A 1 126 VAL 126 181 181 VAL VAL A . n A 1 127 LEU 127 182 182 LEU LEU A . n A 1 128 PRO 128 183 183 PRO PRO A . n A 1 129 GLN 129 184 184 GLN GLN A . n A 1 130 GLY 130 185 185 GLY GLY A . n A 1 131 TYR 131 186 186 TYR TYR A . n A 1 132 TYR 132 187 187 TYR TYR A . n A 1 133 ILE 133 188 188 ILE ILE A . n A 1 134 GLU 134 189 189 GLU GLU A . n A 1 135 GLY 135 190 190 GLY GLY A . n A 1 136 SER 136 191 191 SER SER A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 U5P 1 201 192 U5P DRG A . C 3 HOH 1 301 193 HOH HOH A . C 3 HOH 2 302 194 HOH HOH A . C 3 HOH 3 303 195 HOH HOH A . C 3 HOH 4 304 196 HOH HOH A . C 3 HOH 5 305 197 HOH HOH A . C 3 HOH 6 306 200 HOH HOH A . C 3 HOH 7 307 201 HOH HOH A . C 3 HOH 8 308 202 HOH HOH A . C 3 HOH 9 309 203 HOH HOH A . C 3 HOH 10 310 204 HOH HOH A . C 3 HOH 11 311 205 HOH HOH A . C 3 HOH 12 312 206 HOH HOH A . C 3 HOH 13 313 207 HOH HOH A . C 3 HOH 14 314 208 HOH HOH A . C 3 HOH 15 315 209 HOH HOH A . C 3 HOH 16 316 210 HOH HOH A . C 3 HOH 17 317 211 HOH HOH A . C 3 HOH 18 318 212 HOH HOH A . C 3 HOH 19 319 214 HOH HOH A . C 3 HOH 20 320 215 HOH HOH A . C 3 HOH 21 321 216 HOH HOH A . C 3 HOH 22 322 217 HOH HOH A . C 3 HOH 23 323 218 HOH HOH A . C 3 HOH 24 324 219 HOH HOH A . C 3 HOH 25 325 220 HOH HOH A . C 3 HOH 26 326 221 HOH HOH A . C 3 HOH 27 327 222 HOH HOH A . C 3 HOH 28 328 223 HOH HOH A . C 3 HOH 29 329 224 HOH HOH A . C 3 HOH 30 330 225 HOH HOH A . C 3 HOH 31 331 226 HOH HOH A . C 3 HOH 32 332 227 HOH HOH A . C 3 HOH 33 333 229 HOH HOH A . C 3 HOH 34 334 231 HOH HOH A . C 3 HOH 35 335 232 HOH HOH A . C 3 HOH 36 336 233 HOH HOH A . C 3 HOH 37 337 234 HOH HOH A . C 3 HOH 38 338 235 HOH HOH A . C 3 HOH 39 339 236 HOH HOH A . C 3 HOH 40 340 237 HOH HOH A . C 3 HOH 41 341 238 HOH HOH A . C 3 HOH 42 342 239 HOH HOH A . C 3 HOH 43 343 240 HOH HOH A . C 3 HOH 44 344 241 HOH HOH A . C 3 HOH 45 345 245 HOH HOH A . C 3 HOH 46 346 246 HOH HOH A . C 3 HOH 47 347 247 HOH HOH A . C 3 HOH 48 348 248 HOH HOH A . C 3 HOH 49 349 249 HOH HOH A . C 3 HOH 50 350 250 HOH HOH A . C 3 HOH 51 351 251 HOH HOH A . C 3 HOH 52 352 252 HOH HOH A . C 3 HOH 53 353 253 HOH HOH A . C 3 HOH 54 354 254 HOH HOH A . C 3 HOH 55 355 255 HOH HOH A . C 3 HOH 56 356 256 HOH HOH A . C 3 HOH 57 357 257 HOH HOH A . C 3 HOH 58 358 258 HOH HOH A . C 3 HOH 59 359 259 HOH HOH A . C 3 HOH 60 360 260 HOH HOH A . C 3 HOH 61 361 261 HOH HOH A . C 3 HOH 62 362 262 HOH HOH A . C 3 HOH 63 363 263 HOH HOH A . C 3 HOH 64 364 264 HOH HOH A . C 3 HOH 65 365 265 HOH HOH A . C 3 HOH 66 366 266 HOH HOH A . C 3 HOH 67 367 267 HOH HOH A . C 3 HOH 68 368 268 HOH HOH A . C 3 HOH 69 369 269 HOH HOH A . C 3 HOH 70 370 270 HOH HOH A . C 3 HOH 71 371 271 HOH HOH A . C 3 HOH 72 372 272 HOH HOH A . C 3 HOH 73 373 273 HOH HOH A . C 3 HOH 74 374 274 HOH HOH A . C 3 HOH 75 375 275 HOH HOH A . C 3 HOH 76 376 276 HOH HOH A . C 3 HOH 77 377 277 HOH HOH A . C 3 HOH 78 378 279 HOH HOH A . C 3 HOH 79 379 281 HOH HOH A . C 3 HOH 80 380 283 HOH HOH A . C 3 HOH 81 381 284 HOH HOH A . C 3 HOH 82 382 285 HOH HOH A . C 3 HOH 83 383 286 HOH HOH A . C 3 HOH 84 384 287 HOH HOH A . C 3 HOH 85 385 288 HOH HOH A . C 3 HOH 86 386 290 HOH HOH A . C 3 HOH 87 387 291 HOH HOH A . C 3 HOH 88 388 292 HOH HOH A . C 3 HOH 89 389 293 HOH HOH A . C 3 HOH 90 390 294 HOH HOH A . C 3 HOH 91 391 296 HOH HOH A . C 3 HOH 92 392 297 HOH HOH A . C 3 HOH 93 393 298 HOH HOH A . C 3 HOH 94 394 299 HOH HOH A . C 3 HOH 95 395 300 HOH HOH A . C 3 HOH 96 396 301 HOH HOH A . C 3 HOH 97 397 302 HOH HOH A . C 3 HOH 98 398 303 HOH HOH A . C 3 HOH 99 399 304 HOH HOH A . C 3 HOH 100 400 305 HOH HOH A . C 3 HOH 101 401 306 HOH HOH A . C 3 HOH 102 402 307 HOH HOH A . C 3 HOH 103 403 308 HOH HOH A . C 3 HOH 104 404 309 HOH HOH A . C 3 HOH 105 405 310 HOH HOH A . C 3 HOH 106 406 311 HOH HOH A . C 3 HOH 107 407 312 HOH HOH A . C 3 HOH 108 408 313 HOH HOH A . C 3 HOH 109 409 314 HOH HOH A . C 3 HOH 110 410 315 HOH HOH A . C 3 HOH 111 411 316 HOH HOH A . C 3 HOH 112 412 317 HOH HOH A . C 3 HOH 113 413 318 HOH HOH A . C 3 HOH 114 414 319 HOH HOH A . C 3 HOH 115 415 320 HOH HOH A . C 3 HOH 116 416 321 HOH HOH A . C 3 HOH 117 417 322 HOH HOH A . C 3 HOH 118 418 323 HOH HOH A . C 3 HOH 119 419 324 HOH HOH A . C 3 HOH 120 420 326 HOH HOH A . C 3 HOH 121 421 327 HOH HOH A . C 3 HOH 122 422 328 HOH HOH A . C 3 HOH 123 423 329 HOH HOH A . C 3 HOH 124 424 330 HOH HOH A . C 3 HOH 125 425 331 HOH HOH A . C 3 HOH 126 426 332 HOH HOH A . C 3 HOH 127 427 333 HOH HOH A . C 3 HOH 128 428 334 HOH HOH A . C 3 HOH 129 429 335 HOH HOH A . C 3 HOH 130 430 336 HOH HOH A . C 3 HOH 131 431 337 HOH HOH A . C 3 HOH 132 432 338 HOH HOH A . C 3 HOH 133 433 339 HOH HOH A . C 3 HOH 134 434 341 HOH HOH A . C 3 HOH 135 435 342 HOH HOH A . C 3 HOH 136 436 343 HOH HOH A . C 3 HOH 137 437 344 HOH HOH A . C 3 HOH 138 438 345 HOH HOH A . C 3 HOH 139 439 346 HOH HOH A . C 3 HOH 140 440 347 HOH HOH A . C 3 HOH 141 441 348 HOH HOH A . C 3 HOH 142 442 349 HOH HOH A . C 3 HOH 143 443 350 HOH HOH A . C 3 HOH 144 444 352 HOH HOH A . C 3 HOH 145 445 353 HOH HOH A . C 3 HOH 146 446 354 HOH HOH A . C 3 HOH 147 447 355 HOH HOH A . C 3 HOH 148 448 356 HOH HOH A . C 3 HOH 149 449 357 HOH HOH A . C 3 HOH 150 450 358 HOH HOH A . C 3 HOH 151 451 359 HOH HOH A . C 3 HOH 152 452 360 HOH HOH A . C 3 HOH 153 453 362 HOH HOH A . C 3 HOH 154 454 363 HOH HOH A . C 3 HOH 155 455 364 HOH HOH A . C 3 HOH 156 456 365 HOH HOH A . C 3 HOH 157 457 366 HOH HOH A . C 3 HOH 158 458 370 HOH HOH A . C 3 HOH 159 459 372 HOH HOH A . C 3 HOH 160 460 373 HOH HOH A . C 3 HOH 161 461 374 HOH HOH A . C 3 HOH 162 462 375 HOH HOH A . C 3 HOH 163 463 377 HOH HOH A . C 3 HOH 164 464 379 HOH HOH A . C 3 HOH 165 465 381 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-05-28 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif 6 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' 4 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 CNS refinement . ? 2 PHENIX refinement '(phenix.refine: 1.8.1_1168)' ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 CNS phasing . ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HZ2 A LYS 98 ? ? HG22 A THR 157 ? ? 1.04 2 1 NZ A LYS 98 ? ? HG22 A THR 157 ? ? 1.56 3 1 O A ASP 160 ? ? HG12 A ILE 161 ? ? 1.57 4 1 O A HOH 322 ? ? O A HOH 357 ? ? 2.01 5 1 OXT A SER 191 ? ? O A HOH 432 ? ? 2.06 6 1 OE1 A GLU 82 ? ? O A HOH 430 ? ? 2.14 7 1 OG A SER 167 ? ? O A HOH 454 ? ? 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CB A ILE 142 ? ? CG2 A ILE 142 ? ? 1.749 1.524 0.225 0.031 N 2 1 CB A VAL 145 ? ? CG2 A VAL 145 ? ? 1.651 1.524 0.127 0.021 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 107 ? ? CZ A ARG 107 ? ? NH1 A ARG 107 ? ? 124.22 120.30 3.92 0.50 N 2 1 CG1 A ILE 142 ? ? CB A ILE 142 ? ? CG2 A ILE 142 ? ? 129.20 111.40 17.80 2.20 N 3 1 C A ASP 165 ? ? N A PRO 166 ? ? CA A PRO 166 ? ? 129.25 119.30 9.95 1.50 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 107 ? ? 43.68 125.04 2 1 THR A 111 ? ? -117.81 -165.78 3 1 ASP A 113 ? ? -102.51 -88.56 4 1 LEU A 119 ? ? -101.08 50.17 5 1 LEU A 120 ? ? -19.45 153.17 6 1 ILE A 161 ? ? -167.04 111.60 7 1 ASP A 163 ? ? -57.23 175.52 8 1 PRO A 166 ? ? -65.80 5.40 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASN 115 ? A ASN 60 2 1 Y 1 A GLN 116 ? A GLN 61 3 1 Y 1 A ARG 117 ? A ARG 62 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 PHE N N N N 216 PHE CA C N S 217 PHE C C N N 218 PHE O O N N 219 PHE CB C N N 220 PHE CG C Y N 221 PHE CD1 C Y N 222 PHE CD2 C Y N 223 PHE CE1 C Y N 224 PHE CE2 C Y N 225 PHE CZ C Y N 226 PHE OXT O N N 227 PHE H H N N 228 PHE H2 H N N 229 PHE HA H N N 230 PHE HB2 H N N 231 PHE HB3 H N N 232 PHE HD1 H N N 233 PHE HD2 H N N 234 PHE HE1 H N N 235 PHE HE2 H N N 236 PHE HZ H N N 237 PHE HXT H N N 238 PRO N N N N 239 PRO CA C N S 240 PRO C C N N 241 PRO O O N N 242 PRO CB C N N 243 PRO CG C N N 244 PRO CD C N N 245 PRO OXT O N N 246 PRO H H N N 247 PRO HA H N N 248 PRO HB2 H N N 249 PRO HB3 H N N 250 PRO HG2 H N N 251 PRO HG3 H N N 252 PRO HD2 H N N 253 PRO HD3 H N N 254 PRO HXT H N N 255 SER N N N N 256 SER CA C N S 257 SER C C N N 258 SER O O N N 259 SER CB C N N 260 SER OG O N N 261 SER OXT O N N 262 SER H H N N 263 SER H2 H N N 264 SER HA H N N 265 SER HB2 H N N 266 SER HB3 H N N 267 SER HG H N N 268 SER HXT H N N 269 THR N N N N 270 THR CA C N S 271 THR C C N N 272 THR O O N N 273 THR CB C N R 274 THR OG1 O N N 275 THR CG2 C N N 276 THR OXT O N N 277 THR H H N N 278 THR H2 H N N 279 THR HA H N N 280 THR HB H N N 281 THR HG1 H N N 282 THR HG21 H N N 283 THR HG22 H N N 284 THR HG23 H N N 285 THR HXT H N N 286 TRP N N N N 287 TRP CA C N S 288 TRP C C N N 289 TRP O O N N 290 TRP CB C N N 291 TRP CG C Y N 292 TRP CD1 C Y N 293 TRP CD2 C Y N 294 TRP NE1 N Y N 295 TRP CE2 C Y N 296 TRP CE3 C Y N 297 TRP CZ2 C Y N 298 TRP CZ3 C Y N 299 TRP CH2 C Y N 300 TRP OXT O N N 301 TRP H H N N 302 TRP H2 H N N 303 TRP HA H N N 304 TRP HB2 H N N 305 TRP HB3 H N N 306 TRP HD1 H N N 307 TRP HE1 H N N 308 TRP HE3 H N N 309 TRP HZ2 H N N 310 TRP HZ3 H N N 311 TRP HH2 H N N 312 TRP HXT H N N 313 TYR N N N N 314 TYR CA C N S 315 TYR C C N N 316 TYR O O N N 317 TYR CB C N N 318 TYR CG C Y N 319 TYR CD1 C Y N 320 TYR CD2 C Y N 321 TYR CE1 C Y N 322 TYR CE2 C Y N 323 TYR CZ C Y N 324 TYR OH O N N 325 TYR OXT O N N 326 TYR H H N N 327 TYR H2 H N N 328 TYR HA H N N 329 TYR HB2 H N N 330 TYR HB3 H N N 331 TYR HD1 H N N 332 TYR HD2 H N N 333 TYR HE1 H N N 334 TYR HE2 H N N 335 TYR HH H N N 336 TYR HXT H N N 337 U5P N1 N N N 338 U5P C2 C N N 339 U5P N3 N N N 340 U5P C4 C N N 341 U5P C5 C N N 342 U5P C6 C N N 343 U5P O2 O N N 344 U5P O4 O N N 345 U5P "C1'" C N R 346 U5P "C2'" C N R 347 U5P "O2'" O N N 348 U5P "C3'" C N S 349 U5P "C4'" C N R 350 U5P "O3'" O N N 351 U5P "O4'" O N N 352 U5P "C5'" C N N 353 U5P "O5'" O N N 354 U5P P P N N 355 U5P O1P O N N 356 U5P O2P O N N 357 U5P O3P O N N 358 U5P HN3 H N N 359 U5P H5 H N N 360 U5P H6 H N N 361 U5P "H1'" H N N 362 U5P "H2'" H N N 363 U5P "HO2'" H N N 364 U5P "H3'" H N N 365 U5P "H4'" H N N 366 U5P "HO3'" H N N 367 U5P "H5'1" H N N 368 U5P "H5'2" H N N 369 U5P HOP2 H N N 370 U5P HOP3 H N N 371 VAL N N N N 372 VAL CA C N S 373 VAL C C N N 374 VAL O O N N 375 VAL CB C N N 376 VAL CG1 C N N 377 VAL CG2 C N N 378 VAL OXT O N N 379 VAL H H N N 380 VAL H2 H N N 381 VAL HA H N N 382 VAL HB H N N 383 VAL HG11 H N N 384 VAL HG12 H N N 385 VAL HG13 H N N 386 VAL HG21 H N N 387 VAL HG22 H N N 388 VAL HG23 H N N 389 VAL HXT H N N 390 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 PHE N CA sing N N 205 PHE N H sing N N 206 PHE N H2 sing N N 207 PHE CA C sing N N 208 PHE CA CB sing N N 209 PHE CA HA sing N N 210 PHE C O doub N N 211 PHE C OXT sing N N 212 PHE CB CG sing N N 213 PHE CB HB2 sing N N 214 PHE CB HB3 sing N N 215 PHE CG CD1 doub Y N 216 PHE CG CD2 sing Y N 217 PHE CD1 CE1 sing Y N 218 PHE CD1 HD1 sing N N 219 PHE CD2 CE2 doub Y N 220 PHE CD2 HD2 sing N N 221 PHE CE1 CZ doub Y N 222 PHE CE1 HE1 sing N N 223 PHE CE2 CZ sing Y N 224 PHE CE2 HE2 sing N N 225 PHE CZ HZ sing N N 226 PHE OXT HXT sing N N 227 PRO N CA sing N N 228 PRO N CD sing N N 229 PRO N H sing N N 230 PRO CA C sing N N 231 PRO CA CB sing N N 232 PRO CA HA sing N N 233 PRO C O doub N N 234 PRO C OXT sing N N 235 PRO CB CG sing N N 236 PRO CB HB2 sing N N 237 PRO CB HB3 sing N N 238 PRO CG CD sing N N 239 PRO CG HG2 sing N N 240 PRO CG HG3 sing N N 241 PRO CD HD2 sing N N 242 PRO CD HD3 sing N N 243 PRO OXT HXT sing N N 244 SER N CA sing N N 245 SER N H sing N N 246 SER N H2 sing N N 247 SER CA C sing N N 248 SER CA CB sing N N 249 SER CA HA sing N N 250 SER C O doub N N 251 SER C OXT sing N N 252 SER CB OG sing N N 253 SER CB HB2 sing N N 254 SER CB HB3 sing N N 255 SER OG HG sing N N 256 SER OXT HXT sing N N 257 THR N CA sing N N 258 THR N H sing N N 259 THR N H2 sing N N 260 THR CA C sing N N 261 THR CA CB sing N N 262 THR CA HA sing N N 263 THR C O doub N N 264 THR C OXT sing N N 265 THR CB OG1 sing N N 266 THR CB CG2 sing N N 267 THR CB HB sing N N 268 THR OG1 HG1 sing N N 269 THR CG2 HG21 sing N N 270 THR CG2 HG22 sing N N 271 THR CG2 HG23 sing N N 272 THR OXT HXT sing N N 273 TRP N CA sing N N 274 TRP N H sing N N 275 TRP N H2 sing N N 276 TRP CA C sing N N 277 TRP CA CB sing N N 278 TRP CA HA sing N N 279 TRP C O doub N N 280 TRP C OXT sing N N 281 TRP CB CG sing N N 282 TRP CB HB2 sing N N 283 TRP CB HB3 sing N N 284 TRP CG CD1 doub Y N 285 TRP CG CD2 sing Y N 286 TRP CD1 NE1 sing Y N 287 TRP CD1 HD1 sing N N 288 TRP CD2 CE2 doub Y N 289 TRP CD2 CE3 sing Y N 290 TRP NE1 CE2 sing Y N 291 TRP NE1 HE1 sing N N 292 TRP CE2 CZ2 sing Y N 293 TRP CE3 CZ3 doub Y N 294 TRP CE3 HE3 sing N N 295 TRP CZ2 CH2 doub Y N 296 TRP CZ2 HZ2 sing N N 297 TRP CZ3 CH2 sing Y N 298 TRP CZ3 HZ3 sing N N 299 TRP CH2 HH2 sing N N 300 TRP OXT HXT sing N N 301 TYR N CA sing N N 302 TYR N H sing N N 303 TYR N H2 sing N N 304 TYR CA C sing N N 305 TYR CA CB sing N N 306 TYR CA HA sing N N 307 TYR C O doub N N 308 TYR C OXT sing N N 309 TYR CB CG sing N N 310 TYR CB HB2 sing N N 311 TYR CB HB3 sing N N 312 TYR CG CD1 doub Y N 313 TYR CG CD2 sing Y N 314 TYR CD1 CE1 sing Y N 315 TYR CD1 HD1 sing N N 316 TYR CD2 CE2 doub Y N 317 TYR CD2 HD2 sing N N 318 TYR CE1 CZ doub Y N 319 TYR CE1 HE1 sing N N 320 TYR CE2 CZ sing Y N 321 TYR CE2 HE2 sing N N 322 TYR CZ OH sing N N 323 TYR OH HH sing N N 324 TYR OXT HXT sing N N 325 U5P N1 C2 sing N N 326 U5P N1 C6 sing N N 327 U5P N1 "C1'" sing N N 328 U5P C2 N3 sing N N 329 U5P C2 O2 doub N N 330 U5P N3 C4 sing N N 331 U5P N3 HN3 sing N N 332 U5P C4 C5 sing N N 333 U5P C4 O4 doub N N 334 U5P C5 C6 doub N N 335 U5P C5 H5 sing N N 336 U5P C6 H6 sing N N 337 U5P "C1'" "C2'" sing N N 338 U5P "C1'" "O4'" sing N N 339 U5P "C1'" "H1'" sing N N 340 U5P "C2'" "O2'" sing N N 341 U5P "C2'" "C3'" sing N N 342 U5P "C2'" "H2'" sing N N 343 U5P "O2'" "HO2'" sing N N 344 U5P "C3'" "C4'" sing N N 345 U5P "C3'" "O3'" sing N N 346 U5P "C3'" "H3'" sing N N 347 U5P "C4'" "O4'" sing N N 348 U5P "C4'" "C5'" sing N N 349 U5P "C4'" "H4'" sing N N 350 U5P "O3'" "HO3'" sing N N 351 U5P "C5'" "O5'" sing N N 352 U5P "C5'" "H5'1" sing N N 353 U5P "C5'" "H5'2" sing N N 354 U5P "O5'" P sing N N 355 U5P P O1P doub N N 356 U5P P O2P sing N N 357 U5P P O3P sing N N 358 U5P O2P HOP2 sing N N 359 U5P O3P HOP3 sing N N 360 VAL N CA sing N N 361 VAL N H sing N N 362 VAL N H2 sing N N 363 VAL CA C sing N N 364 VAL CA CB sing N N 365 VAL CA HA sing N N 366 VAL C O doub N N 367 VAL C OXT sing N N 368 VAL CB CG1 sing N N 369 VAL CB CG2 sing N N 370 VAL CB HB sing N N 371 VAL CG1 HG11 sing N N 372 VAL CG1 HG12 sing N N 373 VAL CG1 HG13 sing N N 374 VAL CG2 HG21 sing N N 375 VAL CG2 HG22 sing N N 376 VAL CG2 HG23 sing N N 377 VAL OXT HXT sing N N 378 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "URIDINE-5'-MONOPHOSPHATE" U5P 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4J3K _pdbx_initial_refinement_model.details ? #