HEADER TRANSFERASE 12-JUL-13 4LOB TITLE CRYSTAL STRUCTURE OF POLYPRENYL DIPHOSPHATE SYNTHASE A1S_2732 (TARGET TITLE 2 EFI-509223) FROM ACINETOBACTER BAUMANNII COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYPRENYL SYNTHETASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 23-347; COMPND 5 SYNONYM: POLYPRENYL SYNTHASE; COMPND 6 EC: 2.5.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACINETOBACTER BAUMANNII; SOURCE 3 ORGANISM_TAXID: 470; SOURCE 4 GENE: ACINIS123_1931; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) RIL KEYWDS ISOPRENOID SYNTHASE, ENZYME FUNCTION INITIATIVE, EFI, TRANSFERASE, KEYWDS 2 STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL,E.WASHINGTON, AUTHOR 2 A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS,H.J.IMKER,N.AL OBAIDI, AUTHOR 3 M.STEAD,J.LOVE,C.D.POULTER,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 3 20-SEP-23 4LOB 1 REMARK SEQADV REVDAT 2 24-JAN-18 4LOB 1 AUTHOR REVDAT 1 24-JUL-13 4LOB 0 JRNL AUTH Y.PATSKOVSKY,R.TORO,R.BHOSLE,B.HILLERICH,R.D.SEIDEL, JRNL AUTH 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, JRNL AUTH 3 H.J.IMKER,N.AL OBAIDI,M.STEAD,J.LOVE,C.D.POULTER,J.A.GERLT, JRNL AUTH 4 S.C.ALMO JRNL TITL CRYSTAL STRUCTURE OF POLYPRENYL DIPHOSPHATE SYNTHASE FROM JRNL TITL 2 ACINETOBACTER BAUMANNII JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22212 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.202 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.200 REMARK 3 FREE R VALUE TEST SET COUNT : 745 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1610 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.58 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 57 REMARK 3 BIN FREE R VALUE : 0.4270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2494 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 9 REMARK 3 SOLVENT ATOMS : 87 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 47.63 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.73000 REMARK 3 B22 (A**2) : 5.31000 REMARK 3 B33 (A**2) : -1.59000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.193 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.186 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.161 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.463 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.935 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2593 ; 0.006 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2523 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3522 ; 0.958 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5794 ; 0.725 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 336 ; 4.780 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 117 ;35.342 ;24.872 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 451 ;15.841 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;18.486 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 419 ; 0.049 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2970 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 570 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1326 ;10.034 ; 3.190 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1325 ;10.037 ; 3.188 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1659 ;11.595 ; 5.306 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1660 ;11.592 ; 5.309 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1267 ;11.911 ; 3.794 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1267 ;11.911 ; 3.794 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1861 ;14.353 ; 5.975 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3065 ;14.910 ;14.554 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3066 ;14.929 ;14.563 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -15 A 324 REMARK 3 ORIGIN FOR THE GROUP (A): 163.1512 48.0596 4.8267 REMARK 3 T TENSOR REMARK 3 T11: 0.1700 T22: 0.0449 REMARK 3 T33: 0.1594 T12: -0.0082 REMARK 3 T13: 0.0222 T23: -0.0470 REMARK 3 L TENSOR REMARK 3 L11: 2.5760 L22: 1.0373 REMARK 3 L33: 2.3898 L12: -0.3605 REMARK 3 L13: 0.7983 L23: -0.7106 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: -0.2876 S13: 0.2298 REMARK 3 S21: 0.1418 S22: 0.0557 S23: 0.0565 REMARK 3 S31: -0.1715 S32: -0.2015 S33: 0.0178 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS REMARK 3 U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4LOB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080880. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DIAMOND(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 23096 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.13000 REMARK 200 FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4JYX REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.53 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.5 M POTASSIUM THIOCYANATE, PH 4.5, REMARK 280 0.1 M SODIUM ACETATE, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 72.12250 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.00400 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 72.12250 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 23.00400 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -91.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 288.49000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 92.01600 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -21 REMARK 465 HIS A -20 REMARK 465 HIS A -19 REMARK 465 HIS A -18 REMARK 465 HIS A -17 REMARK 465 HIS A -16 REMARK 465 GLU A 93 REMARK 465 SER A 94 REMARK 465 GLY A 95 REMARK 465 LEU A 96 REMARK 465 ARG A 97 REMARK 465 ARG A 98 REMARK 465 GLY A 99 REMARK 465 ARG A 100 REMARK 465 PRO A 101 REMARK 465 THR A 102 REMARK 465 ALA A 103 REMARK 465 ASN A 104 REMARK 465 ALA A 105 REMARK 465 THR A 106 REMARK 465 GLN A 325 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A -15 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A 26 CG CD OE1 OE2 REMARK 470 LYS A 31 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 9 -55.33 -129.97 REMARK 500 VAL A 13 34.60 -99.31 REMARK 500 THR A 240 132.75 56.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 404 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-509223 RELATED DB: TARGETTRACK DBREF 4LOB A 1 325 UNP J4JED5 J4JED5_ACIBA 23 347 SEQADV 4LOB MET A -21 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -20 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -19 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -18 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -17 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -16 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB HIS A -15 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB SER A -14 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB SER A -13 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB GLY A -12 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB VAL A -11 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB ASP A -10 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB LEU A -9 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB GLY A -8 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB THR A -7 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB GLU A -6 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB ASN A -5 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB LEU A -4 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB TYR A -3 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB PHE A -2 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB GLN A -1 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB SER A 0 UNP J4JED5 EXPRESSION TAG SEQADV 4LOB ASP A 63 UNP J4JED5 GLY 85 CONFLICT SEQADV 4LOB THR A 251 UNP J4JED5 ILE 273 CONFLICT SEQRES 1 A 347 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 347 GLY THR GLU ASN LEU TYR PHE GLN SER MET VAL ILE ASP SEQRES 3 A 347 PHE LYS GLN ASP ILE LEU ALA PRO VAL ALA THR ASP PHE SEQRES 4 A 347 ALA ALA MET ASP HIS LEU ILE ASN GLU GLY ILE SER SER SEQRES 5 A 347 LYS VAL GLY LEU VAL MET SER VAL SER LYS HIS VAL VAL SEQRES 6 A 347 GLU ALA GLY GLY LYS ARG MET ARG PRO ILE MET CYS LEU SEQRES 7 A 347 LEU ALA ALA ARG ALA CYS ASP LEU ASP ASN MET GLN ASN SEQRES 8 A 347 ALA GLN ARG LEU ALA ALA ILE ILE GLU MET LEU HIS THR SEQRES 9 A 347 ALA THR LEU VAL HIS ASP ASP VAL VAL ASP GLU SER GLY SEQRES 10 A 347 LEU ARG ARG GLY ARG PRO THR ALA ASN ALA THR TRP ASN SEQRES 11 A 347 ASN GLN THR ALA VAL LEU VAL GLY ASP PHE LEU ILE ALA SEQRES 12 A 347 ARG ALA PHE ASP LEU LEU VAL ASP LEU ASN ASN MET THR SEQRES 13 A 347 LEU LEU LYS ASP PHE SER THR GLY THR CYS GLU ILE ALA SEQRES 14 A 347 GLU GLY GLU VAL LEU GLN LEU GLN SER GLN HIS GLN PRO SEQRES 15 A 347 ASP THR THR GLU GLU THR TYR LEU LYS ILE ILE HIS GLY SEQRES 16 A 347 LYS THR SER ARG LEU PHE GLU LEU ALA THR GLU GLY ALA SEQRES 17 A 347 ALA ILE LEU ALA GLY GLN GLU ALA TYR ARG GLU PRO LEU SEQRES 18 A 347 ARG LEU PHE ALA GLY HIS PHE GLY ASN ALA PHE GLN ILE SEQRES 19 A 347 ILE ASP ASP ILE LEU ASP TYR THR SER ASP ALA GLU THR SEQRES 20 A 347 LEU GLY LYS ASN ILE GLY ASP ASP LEU MET GLU GLY LYS SEQRES 21 A 347 PRO THR LEU PRO LEU ILE SER ALA LEU ALA HIS SER THR SEQRES 22 A 347 GLY GLU GLU HIS ALA ILE ILE ARG ARG SER ILE ALA THR SEQRES 23 A 347 GLY GLY VAL ASP GLN LEU PRO LYS VAL ILE GLU ILE VAL SEQRES 24 A 347 GLN LYS SER GLY ALA LEU ASP TYR CYS GLN ARG ARG ALA SEQRES 25 A 347 GLN GLU GLU THR GLU ALA ALA LEU GLN ALA LEU SER ILE SEQRES 26 A 347 LEU PRO ASP THR PRO TYR ARG GLN ALA LEU ILE ASN LEU SEQRES 27 A 347 THR ARG LEU ALA LEU HIS ARG ILE GLN HET GOL A 401 6 HET CL A 402 1 HET CL A 403 1 HET CL A 404 1 HETNAM GOL GLYCEROL HETNAM CL CHLORIDE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 CL 3(CL 1-) FORMUL 6 HOH *87(H2 O) HELIX 1 1 ASP A -10 PHE A -2 1 9 HELIX 2 2 GLN A -1 ILE A 3 5 5 HELIX 3 3 ASP A 4 ILE A 9 1 6 HELIX 4 4 LEU A 10 PRO A 12 5 3 HELIX 5 5 VAL A 13 ILE A 28 1 16 HELIX 6 6 VAL A 32 ALA A 45 1 14 HELIX 7 7 ARG A 49 CYS A 62 1 14 HELIX 8 8 ASN A 66 ASP A 89 1 24 HELIX 9 9 ASN A 108 LEU A 130 1 23 HELIX 10 10 ASN A 132 SER A 156 1 25 HELIX 11 11 THR A 163 THR A 175 1 13 HELIX 12 12 THR A 175 GLY A 191 1 17 HELIX 13 13 GLN A 192 ASP A 218 1 27 HELIX 14 14 TYR A 219 GLY A 227 5 9 HELIX 15 15 GLY A 231 GLY A 237 1 7 HELIX 16 16 THR A 240 HIS A 249 1 10 HELIX 17 17 THR A 251 GLY A 265 1 15 HELIX 18 18 GLN A 269 SER A 280 1 12 HELIX 19 19 GLY A 281 SER A 302 1 22 HELIX 20 20 THR A 307 ARG A 323 1 17 SITE 1 AC1 7 HIS A 172 GLU A 180 LEU A 201 HIS A 205 SITE 2 AC1 7 ASN A 208 HOH A 536 HOH A 556 SITE 1 AC2 4 ARG A 49 MET A 50 ARG A 51 HOH A 527 SITE 1 AC3 5 LEU A -9 ASN A -5 SER A 0 ARG A 318 SITE 2 AC3 5 HOH A 526 SITE 1 AC4 3 LEU A 64 ASP A 65 HOH A 575 CRYST1 144.245 46.008 49.286 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006933 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021735 0.000000 0.00000 SCALE3 0.000000 0.000000 0.020290 0.00000