HEADER TRANSFERASE/TRANSFERASE INHIBITOR 16-JUL-13 4LPG TITLE CRYSTAL STRUCTURE OF HUMAN FPPS IN COMPLEX WITH CL01131 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FARNESYL PYROPHOSPHATE SYNTHASE; COMPND 3 CHAIN: F; COMPND 4 FRAGMENT: UNP RESIDUES 67-419; COMPND 5 SYNONYM: FPP SYNTHASE, FPS, (2E,6E)-FARNESYL DIPHOSPHATE SYNTHASE, COMPND 6 DIMETHYLALLYLTRANSTRANSFERASE, FARNESYL DIPHOSPHATE SYNTHASE, COMPND 7 GERANYLTRANSTRANSFERASE; COMPND 8 EC: 2.5.1.10, 2.5.1.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: FDPS, FPS, KIAA1293; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.PARK,C.Y.LEUNG,Y.S.TSANTRIZOS,A.M.BERGHUIS REVDAT 3 20-SEP-23 4LPG 1 REMARK SEQADV REVDAT 2 23-JUL-14 4LPG 1 JRNL REVDAT 1 25-JUN-14 4LPG 0 JRNL AUTH J.W.DE SCHUTTER,J.PARK,C.Y.LEUNG,P.GORMLEY,Y.S.LIN,Z.HU, JRNL AUTH 2 A.M.BERGHUIS,J.POIRIER,Y.S.TSANTRIZOS JRNL TITL MULTISTAGE SCREENING REVEALS CHAMELEON LIGANDS OF THE HUMAN JRNL TITL 2 FARNESYL PYROPHOSPHATE SYNTHASE: IMPLICATIONS TO DRUG JRNL TITL 3 DISCOVERY FOR NEURODEGENERATIVE DISEASES. JRNL REF J.MED.CHEM. V. 57 5764 2014 JRNL REFN ISSN 0022-2623 JRNL PMID 24911527 JRNL DOI 10.1021/JM500629E REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.58 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 19406 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1047 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1345 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.45 REMARK 3 BIN R VALUE (WORKING SET) : 0.2360 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.2660 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2666 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 40 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 71.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.75000 REMARK 3 B22 (A**2) : -3.75000 REMARK 3 B33 (A**2) : 7.49000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.248 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.207 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.141 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.209 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2756 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2550 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3752 ; 1.752 ; 1.977 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5832 ; 0.847 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 339 ; 5.594 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 126 ;35.142 ;24.603 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 438 ;15.489 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;19.270 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 417 ; 0.093 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3145 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 640 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1362 ; 2.479 ; 3.628 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1361 ; 2.478 ; 3.628 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1699 ; 3.703 ; 5.432 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1700 ; 3.702 ; 5.432 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1394 ; 3.406 ; 3.912 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1395 ; 3.405 ; 3.914 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 2054 ; 5.048 ; 5.775 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 3238 ; 7.035 ;29.944 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 3239 ; 7.034 ;29.954 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 8 F 35 REMARK 3 ORIGIN FOR THE GROUP (A): 2.1647 82.0195 9.8130 REMARK 3 T TENSOR REMARK 3 T11: 0.2849 T22: 0.4700 REMARK 3 T33: 0.4630 T12: -0.1231 REMARK 3 T13: -0.1721 T23: -0.0793 REMARK 3 L TENSOR REMARK 3 L11: 9.7667 L22: 6.1854 REMARK 3 L33: 11.3467 L12: 1.7426 REMARK 3 L13: -1.4024 L23: 0.0245 REMARK 3 S TENSOR REMARK 3 S11: -0.4138 S12: 1.1572 S13: 0.0462 REMARK 3 S21: -0.8515 S22: 0.5536 S23: 0.8176 REMARK 3 S31: 0.9966 S32: -1.4469 S33: -0.1398 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 36 F 78 REMARK 3 ORIGIN FOR THE GROUP (A): 4.7300 83.5130 13.8014 REMARK 3 T TENSOR REMARK 3 T11: 0.1504 T22: 0.2833 REMARK 3 T33: 0.2857 T12: -0.0721 REMARK 3 T13: -0.1226 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 7.0778 L22: 2.1852 REMARK 3 L33: 6.3527 L12: 0.5807 REMARK 3 L13: -5.4032 L23: 0.5637 REMARK 3 S TENSOR REMARK 3 S11: 0.1264 S12: 0.9417 S13: -0.0269 REMARK 3 S21: -0.3712 S22: 0.0409 S23: 0.5085 REMARK 3 S31: 0.0201 S32: -1.0662 S33: -0.1673 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 79 F 178 REMARK 3 ORIGIN FOR THE GROUP (A): 13.2309 85.7769 18.9145 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0426 REMARK 3 T33: 0.1456 T12: -0.0333 REMARK 3 T13: -0.0111 T23: -0.0096 REMARK 3 L TENSOR REMARK 3 L11: 4.7077 L22: 3.0009 REMARK 3 L33: 2.6965 L12: -0.4686 REMARK 3 L13: -1.5845 L23: -0.3849 REMARK 3 S TENSOR REMARK 3 S11: 0.0007 S12: 0.1341 S13: -0.1782 REMARK 3 S21: -0.1901 S22: 0.0647 S23: 0.3276 REMARK 3 S31: 0.1318 S32: -0.2400 S33: -0.0654 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 179 F 349 REMARK 3 ORIGIN FOR THE GROUP (A): 10.4581 76.2710 38.9236 REMARK 3 T TENSOR REMARK 3 T11: 0.2454 T22: 0.3511 REMARK 3 T33: 0.3384 T12: 0.0196 REMARK 3 T13: 0.0779 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 4.9001 L22: 3.5756 REMARK 3 L33: 4.2740 L12: -0.3865 REMARK 3 L13: -0.3387 L23: -1.7561 REMARK 3 S TENSOR REMARK 3 S11: -0.0782 S12: -0.6688 S13: -0.7473 REMARK 3 S21: 0.4318 S22: -0.1469 S23: 0.0056 REMARK 3 S31: 0.5359 S32: 0.5491 S33: 0.2251 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LPG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000080921. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : ACCEL/BRUKER DOUBLE CRYSTAL REMARK 200 SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20573 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 49.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 14.40 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 36.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.35 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.41 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.40 REMARK 200 R MERGE FOR SHELL (I) : 0.52700 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: REFMAC 5.7.0032 REMARK 200 STARTING MODEL: PDB ENTRY 2F7M REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.16 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.74 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 17% PEG10000, 6.8% ETHYLENE GLYCOL, REMARK 280 15% GLYCEROL, 0.085 M HEPES, MICROSEEDING (SEE PRIMARY CITATION REMARK 280 FOR DETAILS), PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 295.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.51500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 55.43500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 55.43500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.25750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 55.43500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 55.43500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.77250 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 55.43500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 55.43500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 19.25750 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 55.43500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 55.43500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 57.77250 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 38.51500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4440 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28140 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -43.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 110.87000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 110.87000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 38.51500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET F -21 REMARK 465 GLY F -20 REMARK 465 SER F -19 REMARK 465 SER F -18 REMARK 465 HIS F -17 REMARK 465 HIS F -16 REMARK 465 HIS F -15 REMARK 465 HIS F -14 REMARK 465 HIS F -13 REMARK 465 HIS F -12 REMARK 465 SER F -11 REMARK 465 SER F -10 REMARK 465 GLY F -9 REMARK 465 ARG F -8 REMARK 465 GLU F -7 REMARK 465 ASN F -6 REMARK 465 LEU F -5 REMARK 465 TYR F -4 REMARK 465 PHE F -3 REMARK 465 GLN F -2 REMARK 465 GLY F -1 REMARK 465 HIS F 0 REMARK 465 MET F 1 REMARK 465 ASN F 2 REMARK 465 GLY F 3 REMARK 465 ASP F 4 REMARK 465 GLN F 5 REMARK 465 ASN F 6 REMARK 465 SER F 7 REMARK 465 ASP F 31 REMARK 465 LYS F 350 REMARK 465 ARG F 351 REMARK 465 ARG F 352 REMARK 465 LYS F 353 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP F 8 CG OD1 OD2 REMARK 470 GLN F 12 CG CD OE1 NE2 REMARK 470 GLN F 15 CG CD OE1 NE2 REMARK 470 GLU F 30 CG CD OE1 OE2 REMARK 470 GLU F 32 CG CD OE1 OE2 REMARK 470 MET F 33 SD CE REMARK 470 LYS F 57 CD CE NZ REMARK 470 GLU F 73 CG CD OE1 OE2 REMARK 470 ARG F 75 CG CD NE CZ NH1 NH2 REMARK 470 LYS F 76 NZ REMARK 470 VAL F 183 CG1 CG2 REMARK 470 LYS F 191 CD CE NZ REMARK 470 LYS F 223 CE NZ REMARK 470 LYS F 257 CG CD CE NZ REMARK 470 LYS F 266 NZ REMARK 470 ARG F 277 CZ NH1 NH2 REMARK 470 THR F 279 OG1 CG2 REMARK 470 GLU F 281 CG CD OE1 OE2 REMARK 470 GLN F 292 CG CD OE1 NE2 REMARK 470 LYS F 293 CG CD CE NZ REMARK 470 GLU F 294 CG CD OE1 OE2 REMARK 470 GLU F 296 CG CD OE1 OE2 REMARK 470 LYS F 297 CG CD CE NZ REMARK 470 VAL F 298 CG1 CG2 REMARK 470 ARG F 300 CG CD NE CZ NH1 NH2 REMARK 470 GLU F 307 CG CD OE1 OE2 REMARK 470 LEU F 315 CG CD1 CD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN F 77 56.90 -97.01 REMARK 500 VAL F 124 -67.73 -101.33 REMARK 500 ALA F 278 118.32 -166.90 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 F 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1MV F 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4JPH RELATED DB: PDB DBREF 4LPG F 1 353 UNP P14324 FPPS_HUMAN 67 419 SEQADV 4LPG MET F -21 UNP P14324 EXPRESSION TAG SEQADV 4LPG GLY F -20 UNP P14324 EXPRESSION TAG SEQADV 4LPG SER F -19 UNP P14324 EXPRESSION TAG SEQADV 4LPG SER F -18 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -17 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -16 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -15 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -14 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -13 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F -12 UNP P14324 EXPRESSION TAG SEQADV 4LPG SER F -11 UNP P14324 EXPRESSION TAG SEQADV 4LPG SER F -10 UNP P14324 EXPRESSION TAG SEQADV 4LPG GLY F -9 UNP P14324 EXPRESSION TAG SEQADV 4LPG ARG F -8 UNP P14324 EXPRESSION TAG SEQADV 4LPG GLU F -7 UNP P14324 EXPRESSION TAG SEQADV 4LPG ASN F -6 UNP P14324 EXPRESSION TAG SEQADV 4LPG LEU F -5 UNP P14324 EXPRESSION TAG SEQADV 4LPG TYR F -4 UNP P14324 EXPRESSION TAG SEQADV 4LPG PHE F -3 UNP P14324 EXPRESSION TAG SEQADV 4LPG GLN F -2 UNP P14324 EXPRESSION TAG SEQADV 4LPG GLY F -1 UNP P14324 EXPRESSION TAG SEQADV 4LPG HIS F 0 UNP P14324 EXPRESSION TAG SEQRES 1 F 375 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 F 375 ARG GLU ASN LEU TYR PHE GLN GLY HIS MET ASN GLY ASP SEQRES 3 F 375 GLN ASN SER ASP VAL TYR ALA GLN GLU LYS GLN ASP PHE SEQRES 4 F 375 VAL GLN HIS PHE SER GLN ILE VAL ARG VAL LEU THR GLU SEQRES 5 F 375 ASP GLU MET GLY HIS PRO GLU ILE GLY ASP ALA ILE ALA SEQRES 6 F 375 ARG LEU LYS GLU VAL LEU GLU TYR ASN ALA ILE GLY GLY SEQRES 7 F 375 LYS TYR ASN ARG GLY LEU THR VAL VAL VAL ALA PHE ARG SEQRES 8 F 375 GLU LEU VAL GLU PRO ARG LYS GLN ASP ALA ASP SER LEU SEQRES 9 F 375 GLN ARG ALA TRP THR VAL GLY TRP CYS VAL GLU LEU LEU SEQRES 10 F 375 GLN ALA PHE PHE LEU VAL ALA ASP ASP ILE MET ASP SER SEQRES 11 F 375 SER LEU THR ARG ARG GLY GLN ILE CYS TRP TYR GLN LYS SEQRES 12 F 375 PRO GLY VAL GLY LEU ASP ALA ILE ASN ASP ALA ASN LEU SEQRES 13 F 375 LEU GLU ALA CYS ILE TYR ARG LEU LEU LYS LEU TYR CYS SEQRES 14 F 375 ARG GLU GLN PRO TYR TYR LEU ASN LEU ILE GLU LEU PHE SEQRES 15 F 375 LEU GLN SER SER TYR GLN THR GLU ILE GLY GLN THR LEU SEQRES 16 F 375 ASP LEU LEU THR ALA PRO GLN GLY ASN VAL ASP LEU VAL SEQRES 17 F 375 ARG PHE THR GLU LYS ARG TYR LYS SER ILE VAL LYS TYR SEQRES 18 F 375 LYS THR ALA PHE TYR SER PHE TYR LEU PRO ILE ALA ALA SEQRES 19 F 375 ALA MET TYR MET ALA GLY ILE ASP GLY GLU LYS GLU HIS SEQRES 20 F 375 ALA ASN ALA LYS LYS ILE LEU LEU GLU MET GLY GLU PHE SEQRES 21 F 375 PHE GLN ILE GLN ASP ASP TYR LEU ASP LEU PHE GLY ASP SEQRES 22 F 375 PRO SER VAL THR GLY LYS ILE GLY THR ASP ILE GLN ASP SEQRES 23 F 375 ASN LYS CYS SER TRP LEU VAL VAL GLN CYS LEU GLN ARG SEQRES 24 F 375 ALA THR PRO GLU GLN TYR GLN ILE LEU LYS GLU ASN TYR SEQRES 25 F 375 GLY GLN LYS GLU ALA GLU LYS VAL ALA ARG VAL LYS ALA SEQRES 26 F 375 LEU TYR GLU GLU LEU ASP LEU PRO ALA VAL PHE LEU GLN SEQRES 27 F 375 TYR GLU GLU ASP SER TYR SER HIS ILE MET ALA LEU ILE SEQRES 28 F 375 GLU GLN TYR ALA ALA PRO LEU PRO PRO ALA VAL PHE LEU SEQRES 29 F 375 GLY LEU ALA ARG LYS ILE TYR LYS ARG ARG LYS HET PO4 F 401 5 HET 1MV F 402 26 HETNAM PO4 PHOSPHATE ION HETNAM 1MV ({[6-(4-METHYLPHENYL)THIENO[2,3-D]PYRIMIDIN-4- HETNAM 2 1MV YL]AMINO}METHANEDIYL)BIS(PHOSPHONIC ACID) FORMUL 2 PO4 O4 P 3- FORMUL 3 1MV C14 H15 N3 O6 P2 S FORMUL 4 HOH *40(H2 O) HELIX 1 1 ASP F 8 GLU F 30 1 23 HELIX 2 2 HIS F 35 GLU F 37 5 3 HELIX 3 3 ILE F 38 ALA F 53 1 16 HELIX 4 4 TYR F 58 VAL F 72 1 15 HELIX 5 5 GLU F 73 GLN F 77 5 5 HELIX 6 6 ASP F 78 ASP F 107 1 30 HELIX 7 7 TRP F 118 LYS F 121 5 4 HELIX 8 8 VAL F 124 LEU F 126 5 3 HELIX 9 9 ASP F 127 ARG F 148 1 22 HELIX 10 10 TYR F 152 ALA F 178 1 27 HELIX 11 11 ASP F 184 PHE F 188 5 5 HELIX 12 12 THR F 189 THR F 201 1 13 HELIX 13 13 THR F 201 PHE F 206 1 6 HELIX 14 14 PHE F 206 ALA F 217 1 12 HELIX 15 15 GLY F 221 GLY F 250 1 30 HELIX 16 16 ASP F 251 GLY F 256 1 6 HELIX 17 17 SER F 268 ARG F 277 1 10 HELIX 18 18 THR F 279 TYR F 290 1 12 HELIX 19 19 GLU F 294 LEU F 308 1 15 HELIX 20 20 ASP F 309 ALA F 333 1 25 HELIX 21 21 PRO F 338 TYR F 349 1 12 SHEET 1 A 2 THR F 111 ARG F 112 0 SHEET 2 A 2 GLN F 115 ILE F 116 -1 O GLN F 115 N ARG F 112 CISPEP 1 ALA F 334 PRO F 335 0 6.04 SITE 1 AC1 8 LYS F 57 TYR F 58 ASN F 59 ARG F 60 SITE 2 AC1 8 1MV F 402 HOH F 502 HOH F 503 HOH F 522 SITE 1 AC2 8 LYS F 57 ASN F 59 THR F 63 SER F 205 SITE 2 AC2 8 LYS F 347 PO4 F 401 HOH F 522 HOH F 524 CRYST1 110.870 110.870 77.030 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009020 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009020 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012982 0.00000