HEADER PROTEIN BINDING 25-JUL-13 4LUO TITLE FRAGMENT-BASED DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN TITLE 2 A PROTEIN-PROTEIN INTERACTIONS COMPND MOL_ID: 1; COMPND 2 MOLECULE: REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RPA70N (UNP RESIDUES 1-120); COMPND 5 SYNONYM: RP-A P70, REPLICATION FACTOR A PROTEIN 1, RF-A PROTEIN 1, COMPND 6 SINGLE-STRANDED DNA-BINDING PROTEIN, REPLICATION PROTEIN A 70 KDA COMPND 7 DNA-BINDING SUBUNIT, N-TERMINALLY PROCESSED; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RPA1, REPA1, RPA70; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-DE3; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS OB-FOLD, PROTEIN-PROTEIN INTERACTION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR M.D.FELDKAMP,A.O.FRANK,J.P.KENNEDY,A.G.WATERSON,E.T.OLEJNICZAK, AUTHOR 2 N.F.PELZ,J.D.PATRONE,B.VANGAMUDI,D.V.CAMPER,O.W.ROSSANESE,S.W.FESIK, AUTHOR 3 W.J.CHAZIN REVDAT 4 20-SEP-23 4LUO 1 REMARK SEQADV REVDAT 3 12-NOV-14 4LUO 1 AUTHOR REVDAT 2 09-APR-14 4LUO 1 JRNL REVDAT 1 11-DEC-13 4LUO 0 JRNL AUTH A.O.FRANK,M.D.FELDKAMP,J.P.KENNEDY,A.G.WATERSON,N.F.PELZ, JRNL AUTH 2 J.D.PATRONE,B.VANGAMUDI,D.V.CAMPER,O.W.ROSSANESE,W.J.CHAZIN, JRNL AUTH 3 S.W.FESIK JRNL TITL DISCOVERY OF A POTENT INHIBITOR OF REPLICATION PROTEIN A JRNL TITL 2 PROTEIN-PROTEIN INTERACTIONS USING A FRAGMENT-LINKING JRNL TITL 3 APPROACH. JRNL REF J.MED.CHEM. V. 56 9242 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 24147804 JRNL DOI 10.1021/JM401333U REMARK 2 REMARK 2 RESOLUTION. 1.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.21 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 16741 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.189 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 847 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.2176 - 2.7962 1.00 2806 135 0.1694 0.1746 REMARK 3 2 2.7962 - 2.2196 1.00 2679 140 0.1738 0.1734 REMARK 3 3 2.2196 - 1.9391 1.00 2634 147 0.1514 0.1792 REMARK 3 4 1.9391 - 1.7618 1.00 2622 132 0.1671 0.2604 REMARK 3 5 1.7618 - 1.6355 1.00 2618 140 0.1922 0.2347 REMARK 3 6 1.6355 - 1.5391 0.98 2535 153 0.2110 0.2499 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.560 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1094 REMARK 3 ANGLE : 1.383 1505 REMARK 3 CHIRALITY : 0.071 180 REMARK 3 PLANARITY : 0.005 194 REMARK 3 DIHEDRAL : 16.062 426 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID -2 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.8049 1.5449 -4.6245 REMARK 3 T TENSOR REMARK 3 T11: 0.0992 T22: 0.1276 REMARK 3 T33: 0.1561 T12: -0.0029 REMARK 3 T13: -0.0033 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 6.8983 L22: 4.1354 REMARK 3 L33: 2.3539 L12: 1.6781 REMARK 3 L13: -2.7016 L23: -0.2986 REMARK 3 S TENSOR REMARK 3 S11: 0.0144 S12: 0.0443 S13: 0.2433 REMARK 3 S21: 0.0568 S22: 0.0653 S23: 0.1512 REMARK 3 S31: 0.0502 S32: -0.5926 S33: -0.0427 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 16 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.0620 -5.4107 -10.2171 REMARK 3 T TENSOR REMARK 3 T11: 0.1420 T22: 0.1493 REMARK 3 T33: 0.1132 T12: -0.0196 REMARK 3 T13: 0.0124 T23: 0.0237 REMARK 3 L TENSOR REMARK 3 L11: 2.0380 L22: 3.1349 REMARK 3 L33: 2.6654 L12: -0.6653 REMARK 3 L13: 0.5783 L23: 0.6512 REMARK 3 S TENSOR REMARK 3 S11: -0.0941 S12: 0.2306 S13: 0.1303 REMARK 3 S21: -0.3195 S22: 0.0676 S23: -0.1387 REMARK 3 S31: -0.2069 S32: 0.2379 S33: -0.0026 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 41 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8594 -21.2696 -22.1619 REMARK 3 T TENSOR REMARK 3 T11: 0.3992 T22: 0.4411 REMARK 3 T33: 0.3719 T12: 0.0236 REMARK 3 T13: 0.0816 T23: -0.1378 REMARK 3 L TENSOR REMARK 3 L11: 1.8725 L22: 3.3173 REMARK 3 L33: 5.8567 L12: -0.0174 REMARK 3 L13: 2.7327 L23: -2.5153 REMARK 3 S TENSOR REMARK 3 S11: 0.4120 S12: 1.4230 S13: -0.7838 REMARK 3 S21: -1.6751 S22: 0.0130 S23: -0.9006 REMARK 3 S31: 0.2595 S32: 0.5205 S33: -0.2537 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 42 THROUGH 75 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1581 -13.2228 -10.0216 REMARK 3 T TENSOR REMARK 3 T11: 0.1108 T22: 0.1314 REMARK 3 T33: 0.1161 T12: -0.0182 REMARK 3 T13: -0.0171 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 1.9337 L22: 3.1777 REMARK 3 L33: 1.1915 L12: -1.3872 REMARK 3 L13: -0.4471 L23: 0.6767 REMARK 3 S TENSOR REMARK 3 S11: 0.0350 S12: -0.0063 S13: -0.0239 REMARK 3 S21: -0.0316 S22: 0.0398 S23: -0.0749 REMARK 3 S31: 0.0369 S32: 0.0586 S33: -0.0923 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 76 THROUGH 91 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.8067 -5.4329 -16.3297 REMARK 3 T TENSOR REMARK 3 T11: 0.1433 T22: 0.1560 REMARK 3 T33: 0.1625 T12: -0.0208 REMARK 3 T13: 0.0061 T23: 0.0204 REMARK 3 L TENSOR REMARK 3 L11: 0.5162 L22: 1.7747 REMARK 3 L33: 8.5666 L12: 0.0405 REMARK 3 L13: 0.1178 L23: -2.5281 REMARK 3 S TENSOR REMARK 3 S11: -0.0411 S12: 0.1006 S13: 0.0149 REMARK 3 S21: -0.1659 S22: -0.0426 S23: -0.0404 REMARK 3 S31: 0.2232 S32: 0.3943 S33: 0.0772 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 92 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7069 -8.2125 -11.1513 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.1344 REMARK 3 T33: 0.1529 T12: -0.0127 REMARK 3 T13: 0.0096 T23: 0.0159 REMARK 3 L TENSOR REMARK 3 L11: 2.8104 L22: 1.8493 REMARK 3 L33: 7.7303 L12: 0.6578 REMARK 3 L13: -0.6353 L23: -1.4972 REMARK 3 S TENSOR REMARK 3 S11: -0.0797 S12: 0.0546 S13: -0.0657 REMARK 3 S21: -0.0734 S22: 0.0352 S23: -0.0643 REMARK 3 S31: 0.0081 S32: 0.2349 S33: 0.0484 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 120 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.0377 -5.9275 -5.6138 REMARK 3 T TENSOR REMARK 3 T11: 0.1163 T22: 0.1398 REMARK 3 T33: 0.1739 T12: -0.0238 REMARK 3 T13: 0.0049 T23: -0.0108 REMARK 3 L TENSOR REMARK 3 L11: 3.4471 L22: 6.1842 REMARK 3 L33: 8.3701 L12: -1.1819 REMARK 3 L13: 0.8049 L23: -5.4136 REMARK 3 S TENSOR REMARK 3 S11: 0.0737 S12: 0.0207 S13: -0.0018 REMARK 3 S21: -0.0198 S22: 0.2279 S23: 0.3858 REMARK 3 S31: 0.0109 S32: -0.2943 S33: -0.3014 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LUO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081108. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31399 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.540 REMARK 200 RESOLUTION RANGE LOW (A) : 31.211 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.11100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.57 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.72000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.350 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX 1.8.2_1309 REMARK 200 STARTING MODEL: PDB ENTRY 2B29 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.26 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.03 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MES, 200 MM CALCIUM ACETATE, REMARK 280 20% PEG 8000, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.15400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 26.91450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.51100 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 26.91450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.15400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 26.51100 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASN A 37 CG OD1 ND2 REMARK 470 GLN A 70 CG CD OE1 NE2 REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 384 O HOH A 391 1.97 REMARK 500 O20 1DZ A 201 O HOH A 393 2.07 REMARK 500 O HOH A 301 O HOH A 342 2.11 REMARK 500 OE1 GLU A 69 O HOH A 301 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 306 O HOH A 338 4445 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 35 -79.59 -121.91 REMARK 500 GLU A 69 61.64 -157.38 REMARK 500 GLU A 69 -145.90 -123.67 REMARK 500 GLN A 70 118.53 179.27 REMARK 500 GLN A 70 58.84 -100.86 REMARK 500 LEU A 71 113.22 -14.29 REMARK 500 ASN A 74 -14.00 93.41 REMARK 500 VAL A 108 -62.22 -104.40 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1DZ A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1DZ A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LUV RELATED DB: PDB REMARK 900 RELATED ID: 4LUZ RELATED DB: PDB REMARK 900 RELATED ID: 4LW1 RELATED DB: PDB REMARK 900 RELATED ID: 4LWC RELATED DB: PDB DBREF 4LUO A 1 120 UNP P27694 RFA1_HUMAN 1 120 SEQADV 4LUO GLY A -2 UNP P27694 EXPRESSION TAG SEQADV 4LUO SER A -1 UNP P27694 EXPRESSION TAG SEQADV 4LUO HIS A 0 UNP P27694 EXPRESSION TAG SEQADV 4LUO ARG A 7 UNP P27694 GLU 7 ENGINEERED MUTATION SEQRES 1 A 123 GLY SER HIS MET VAL GLY GLN LEU SER ARG GLY ALA ILE SEQRES 2 A 123 ALA ALA ILE MET GLN LYS GLY ASP THR ASN ILE LYS PRO SEQRES 3 A 123 ILE LEU GLN VAL ILE ASN ILE ARG PRO ILE THR THR GLY SEQRES 4 A 123 ASN SER PRO PRO ARG TYR ARG LEU LEU MET SER ASP GLY SEQRES 5 A 123 LEU ASN THR LEU SER SER PHE MET LEU ALA THR GLN LEU SEQRES 6 A 123 ASN PRO LEU VAL GLU GLU GLU GLN LEU SER SER ASN CYS SEQRES 7 A 123 VAL CYS GLN ILE HIS ARG PHE ILE VAL ASN THR LEU LYS SEQRES 8 A 123 ASP GLY ARG ARG VAL VAL ILE LEU MET GLU LEU GLU VAL SEQRES 9 A 123 LEU LYS SER ALA GLU ALA VAL GLY VAL LYS ILE GLY ASN SEQRES 10 A 123 PRO VAL PRO TYR ASN GLU HET 1DZ A 201 34 HET 1DZ A 202 34 HETNAM 1DZ 1-(3-METHYLPHENYL)-5-PHENYL-1H-PYRAZOLE-3-CARBOXYLIC HETNAM 2 1DZ ACID FORMUL 2 1DZ 2(C17 H14 N2 O2) FORMUL 4 HOH *93(H2 O) HELIX 1 1 HIS A 0 LEU A 5 5 6 HELIX 2 2 GLY A 8 LYS A 16 1 9 HELIX 3 3 LEU A 62 GLU A 68 1 7 HELIX 4 4 SER A 104 GLY A 109 1 6 SHEET 1 A 7 VAL A 116 PRO A 117 0 SHEET 2 A 7 ASN A 51 LEU A 58 1 N THR A 52 O VAL A 116 SHEET 3 A 7 ARG A 92 LYS A 103 1 O VAL A 94 N SER A 55 SHEET 4 A 7 VAL A 76 THR A 86 -1 N ASN A 85 O VAL A 93 SHEET 5 A 7 ILE A 24 ILE A 33 -1 N LEU A 25 O CYS A 77 SHEET 6 A 7 ARG A 41 SER A 47 -1 O LEU A 45 N ILE A 28 SHEET 7 A 7 ASN A 51 LEU A 58 -1 O LEU A 58 N TYR A 42 CISPEP 1 GLU A 68 GLU A 69 0 -11.65 CISPEP 2 GLN A 70 LEU A 71 0 15.61 SITE 1 AC1 10 ARG A 31 ILE A 33 ARG A 43 SER A 55 SITE 2 AC1 10 MET A 57 LEU A 87 ARG A 92 VAL A 93 SITE 3 AC1 10 1DZ A 202 HOH A 393 SITE 1 AC2 10 ARG A 7 ARG A 41 MET A 57 ASN A 85 SITE 2 AC2 10 LEU A 87 VAL A 93 ILE A 95 1DZ A 201 SITE 3 AC2 10 HOH A 390 HOH A 392 CRYST1 38.308 53.022 53.829 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026104 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018577 0.00000