HEADER TRANSFERASE/HYDROLASE 25-JUL-13 4LV5 TITLE MURINE IRGA6 BOUND TO TOXOPLASMA ROP5B, A PSEUDOKINASE GDI COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHOPTRY PROTEIN 5B; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 175-541; COMPND 5 SYNONYM: TYPE I RHOPTRY PROTEIN 5, TYPE I RHOPTRY PROTEIN 5B, TYPE COMPND 6 III RHOPTRY PROTEIN 5; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: INTERFERON-INDUCIBLE GTPASE 1; COMPND 10 CHAIN: B; COMPND 11 EC: 3.6.5.-; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TOXOPLASMA GONDII; SOURCE 3 ORGANISM_TAXID: 5811; SOURCE 4 STRAIN: RH; SOURCE 5 GENE: ROP5, ROP5B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLAMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 13 ORGANISM_COMMON: MOUSE; SOURCE 14 ORGANISM_TAXID: 10090; SOURCE 15 GENE: IIGP1, IRGA6; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PGEX4T KEYWDS IMMUNE RELATED GTPASE, GUANINE DISSOCIATION INHIBITOR, PARASITE KEYWDS 2 EFFECTOR, TRANSFERASE-HYDROLASE COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.L.REESE,J.C.BOOTHROYD REVDAT 3 20-SEP-23 4LV5 1 REMARK SEQADV LINK REVDAT 2 02-OCT-13 4LV5 1 REMARK REVDAT 1 25-SEP-13 4LV5 0 JRNL AUTH M.L.REESE,N.SHAH,J.C.BOOTHROYD JRNL TITL MURINE IRGA6 BOUND TO TOXOPLASMA ROP5B, A PSEUDOKINASE GDI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.33 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.970 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 92476 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.030 REMARK 3 FREE R VALUE TEST SET COUNT : 4650 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.3381 - 5.2782 0.99 2918 138 0.1731 0.1828 REMARK 3 2 5.2782 - 4.1910 1.00 2943 158 0.1464 0.1776 REMARK 3 3 4.1910 - 3.6617 0.98 2901 155 0.1587 0.1901 REMARK 3 4 3.6617 - 3.3271 1.00 2913 165 0.1730 0.1970 REMARK 3 5 3.3271 - 3.0887 1.00 2930 150 0.1868 0.2266 REMARK 3 6 3.0887 - 2.9066 1.00 2927 155 0.1905 0.2274 REMARK 3 7 2.9066 - 2.7611 1.00 2950 160 0.1970 0.2368 REMARK 3 8 2.7611 - 2.6410 0.98 2893 155 0.2004 0.2465 REMARK 3 9 2.6410 - 2.5393 0.99 2922 148 0.1993 0.2400 REMARK 3 10 2.5393 - 2.4517 1.00 2942 148 0.2037 0.2728 REMARK 3 11 2.4517 - 2.3750 1.00 2907 152 0.2007 0.2250 REMARK 3 12 2.3750 - 2.3072 1.00 2964 158 0.1974 0.2279 REMARK 3 13 2.3072 - 2.2464 1.00 2935 164 0.2030 0.2526 REMARK 3 14 2.2464 - 2.1916 1.00 2890 140 0.1991 0.2662 REMARK 3 15 2.1916 - 2.1418 1.00 3023 147 0.2020 0.2435 REMARK 3 16 2.1418 - 2.0962 1.00 2877 147 0.2129 0.2238 REMARK 3 17 2.0962 - 2.0543 0.99 2961 143 0.2263 0.2696 REMARK 3 18 2.0543 - 2.0155 1.00 2899 161 0.2292 0.3187 REMARK 3 19 2.0155 - 1.9795 1.00 2987 150 0.2370 0.2877 REMARK 3 20 1.9795 - 1.9460 1.00 2886 150 0.2450 0.3046 REMARK 3 21 1.9460 - 1.9146 1.00 2924 195 0.2476 0.3230 REMARK 3 22 1.9146 - 1.8851 1.00 2864 157 0.2672 0.3312 REMARK 3 23 1.8851 - 1.8574 1.00 3004 172 0.2671 0.3535 REMARK 3 24 1.8574 - 1.8313 1.00 2929 143 0.2813 0.2975 REMARK 3 25 1.8313 - 1.8065 1.00 2947 140 0.2872 0.3036 REMARK 3 26 1.8065 - 1.7830 1.00 2965 142 0.2954 0.3290 REMARK 3 27 1.7830 - 1.7608 0.99 2895 167 0.3214 0.3552 REMARK 3 28 1.7608 - 1.7395 0.99 2928 167 0.3319 0.3483 REMARK 3 29 1.7395 - 1.7193 0.99 2889 163 0.3405 0.3839 REMARK 3 30 1.7193 - 1.7000 0.99 2913 160 0.3671 0.4078 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.210 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 38.61 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 38.03 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 6307 REMARK 3 ANGLE : 1.106 8554 REMARK 3 CHIRALITY : 0.078 963 REMARK 3 PLANARITY : 0.005 1092 REMARK 3 DIHEDRAL : 14.425 2385 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LV5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081125. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 92554 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 39.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3Q60 AND THEN 1TPZ:A USING PHASER REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20% PEG 3350, 0.1M AMMONIUM CITRATE, REMARK 280 PH 7.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS ASYM. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 171 REMARK 465 SER A 172 REMARK 465 HIS A 173 REMARK 465 MET A 174 REMARK 465 ARG A 288 REMARK 465 LEU A 289 REMARK 465 LEU A 290 REMARK 465 GLY A 291 REMARK 465 GLU A 292 REMARK 465 SER A 293 REMARK 465 PRO A 294 REMARK 465 GLU A 295 REMARK 465 GLU A 296 REMARK 465 ALA A 297 REMARK 465 ARG A 298 REMARK 465 ASP A 299 REMARK 465 ARG A 300 REMARK 465 ARG A 301 REMARK 465 THR A 539 REMARK 465 GLY A 540 REMARK 465 GLN A 541 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 PRO B -7 REMARK 465 GLY B -6 REMARK 465 ILE B -5 REMARK 465 PRO B -4 REMARK 465 GLY B -3 REMARK 465 SER B -2 REMARK 465 THR B -1 REMARK 465 THR B 0 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 GLN B 3 REMARK 465 LEU B 4 REMARK 465 PHE B 5 REMARK 465 SER B 6 REMARK 465 SER B 7 REMARK 465 PRO B 8 REMARK 465 LYS B 9 REMARK 465 SER B 10 REMARK 465 ASP B 11 REMARK 465 GLU B 12 REMARK 465 ASN B 13 REMARK 465 THR B 354 REMARK 465 ASP B 355 REMARK 465 ARG B 412 REMARK 465 ASN B 413 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 828 O HOH A 843 1.84 REMARK 500 O HOH B 828 O HOH B 842 1.86 REMARK 500 OD1 ASN B 28 O HOH B 850 1.87 REMARK 500 O HOH B 826 O HOH B 834 1.87 REMARK 500 O HOH A 890 O HOH A 902 1.88 REMARK 500 O HOH B 829 O HOH B 832 1.90 REMARK 500 O2B ADP A 601 O HOH A 895 1.90 REMARK 500 O1 EDO B 503 O HOH B 796 1.91 REMARK 500 OE1 GLN A 528 O HOH A 879 1.95 REMARK 500 OE2 GLU B 95 O HOH B 741 1.97 REMARK 500 OE1 GLU B 148 O HOH B 759 1.98 REMARK 500 O HOH A 884 O HOH A 889 2.02 REMARK 500 O1B ADP A 601 O HOH A 868 2.02 REMARK 500 O HOH B 835 O HOH B 836 2.03 REMARK 500 O HOH A 901 O HOH A 910 2.04 REMARK 500 O HOH A 927 O HOH A 933 2.06 REMARK 500 O HOH A 885 O HOH A 893 2.06 REMARK 500 O HOH B 810 O HOH B 815 2.08 REMARK 500 O HOH B 785 O HOH B 790 2.08 REMARK 500 O HOH B 787 O HOH B 788 2.08 REMARK 500 O HOH B 724 O HOH B 726 2.10 REMARK 500 O HOH A 776 O HOH A 798 2.10 REMARK 500 OE2 GLU A 255 O HOH A 931 2.14 REMARK 500 O HOH A 908 O HOH A 916 2.14 REMARK 500 O HOH A 894 O HOH A 904 2.14 REMARK 500 OH TYR B 114 O HOH B 755 2.15 REMARK 500 OE1 GLU A 275 O HOH A 932 2.15 REMARK 500 ND2 ASN B 138 O HOH B 628 2.16 REMARK 500 O HOH B 750 O HOH B 810 2.16 REMARK 500 O HOH B 762 O HOH B 799 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 217 -99.76 -95.67 REMARK 500 ASN A 218 -144.72 -118.39 REMARK 500 LEU A 227 -139.12 -106.35 REMARK 500 PHE A 318 -37.59 78.18 REMARK 500 ASP A 407 72.94 55.97 REMARK 500 ASP A 407 72.64 55.97 REMARK 500 LEU A 459 -48.57 70.26 REMARK 500 PRO A 494 89.04 -62.70 REMARK 500 LEU A 507 33.81 -94.17 REMARK 500 ASN B 134 40.05 -106.32 REMARK 500 THR B 158 -52.73 65.96 REMARK 500 TYR B 238 -151.49 65.88 REMARK 500 ASP B 290 126.81 85.70 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BME A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LV8 RELATED DB: PDB DBREF 4LV5 A 175 541 UNP F2YGR7 F2YGR7_TOXGO 175 541 DBREF 4LV5 B 1 413 UNP Q9QZ85 IIGP1_MOUSE 1 413 SEQADV 4LV5 GLY A 171 UNP F2YGR7 EXPRESSION TAG SEQADV 4LV5 SER A 172 UNP F2YGR7 EXPRESSION TAG SEQADV 4LV5 HIS A 173 UNP F2YGR7 EXPRESSION TAG SEQADV 4LV5 MET A 174 UNP F2YGR7 EXPRESSION TAG SEQADV 4LV5 GLY B -9 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 SER B -8 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 PRO B -7 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 GLY B -6 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 ILE B -5 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 PRO B -4 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 GLY B -3 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 SER B -2 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 THR B -1 UNP Q9QZ85 EXPRESSION TAG SEQADV 4LV5 THR B 0 UNP Q9QZ85 EXPRESSION TAG SEQRES 1 A 371 GLY SER HIS MET GLU ALA GLY ASP SER PHE MET ARG ASP SEQRES 2 A 371 LEU LEU LYS ARG GLU GLU GLU LEU ILE GLY TYR CYS ARG SEQRES 3 A 371 GLU GLU ALA LEU LYS GLU PRO ALA ALA MET VAL GLU ALA SEQRES 4 A 371 VAL THR ALA THR VAL TRP PRO GLN ASN ALA GLU THR THR SEQRES 5 A 371 VAL ASP SER LEU LEU SER GLN GLY GLU ARG LYS LEU LYS SEQRES 6 A 371 LEU VAL GLU PRO LEU ARG VAL GLY ASP ARG SER VAL VAL SEQRES 7 A 371 PHE LEU VAL ARG ASP VAL GLU ARG LEU GLU ASP PHE ALA SEQRES 8 A 371 LEU LYS VAL PHE THR MET GLY ALA GLU ASN SER ARG SER SEQRES 9 A 371 GLU LEU GLU ARG LEU HIS GLU ALA THR PHE ALA ALA ALA SEQRES 10 A 371 ARG LEU LEU GLY GLU SER PRO GLU GLU ALA ARG ASP ARG SEQRES 11 A 371 ARG ARG LEU LEU LEU PRO SER ASP ALA VAL ALA VAL GLN SEQRES 12 A 371 SER GLN PRO PRO PHE ALA GLN LEU SER PRO GLY GLN ASP SEQRES 13 A 371 ASP TYR ALA VAL ALA ASN TYR LEU LEU LEU MET PRO ALA SEQRES 14 A 371 ALA SER VAL ASP LEU GLU LEU LEU PHE SER THR LEU ASP SEQRES 15 A 371 PHE VAL TYR VAL PHE ARG GLY ASP GLU GLY ILE LEU ALA SEQRES 16 A 371 LEU HIS ILE LEU THR ALA GLN LEU ILE ARG LEU ALA ALA SEQRES 17 A 371 ASN LEU GLN SER LYS GLY LEU VAL HIS GLY HIS PHE THR SEQRES 18 A 371 PRO ASP ASN LEU PHE ILE MET PRO ASP GLY ARG LEU MET SEQRES 19 A 371 LEU GLY ASP VAL SER ALA LEU TRP LYS VAL GLY THR ARG SEQRES 20 A 371 GLY PRO ALA SER SER VAL PRO VAL THR TYR ALA PRO ARG SEQRES 21 A 371 GLU PHE LEU ASN ALA SER THR ALA THR PHE THR HIS ALA SEQRES 22 A 371 LEU ASN ALA TRP GLN LEU GLY LEU SER ILE TYR ARG VAL SEQRES 23 A 371 TRP CYS LEU PHE LEU PRO PHE GLY LEU VAL THR PRO GLY SEQRES 24 A 371 ILE LYS GLY SER TRP LYS ARG PRO SER LEU ARG VAL PRO SEQRES 25 A 371 GLY THR ASP SER LEU ALA PHE GLY SER CYS THR PRO LEU SEQRES 26 A 371 PRO ASP PHE VAL LYS THR LEU ILE GLY ARG PHE LEU ASN SEQRES 27 A 371 PHE ASP ARG ARG ARG ARG LEU LEU PRO LEU GLU ALA MET SEQRES 28 A 371 GLU THR PRO GLU PHE LEU GLN LEU GLN ASN GLU ILE SER SEQRES 29 A 371 SER SER LEU SER THR GLY GLN SEQRES 1 B 423 GLY SER PRO GLY ILE PRO GLY SER THR THR MET GLY GLN SEQRES 2 B 423 LEU PHE SER SER PRO LYS SER ASP GLU ASN ASN ASP LEU SEQRES 3 B 423 PRO SER SER PHE THR GLY TYR PHE LYS LYS PHE ASN THR SEQRES 4 B 423 GLY ARG LYS ILE ILE SER GLN GLU ILE LEU ASN LEU ILE SEQRES 5 B 423 GLU LEU ARG MET ARG LYS GLY ASN ILE GLN LEU THR ASN SEQRES 6 B 423 SER ALA ILE SER ASP ALA LEU LYS GLU ILE ASP SER SER SEQRES 7 B 423 VAL LEU ASN VAL ALA VAL THR GLY GLU THR GLY SER GLY SEQRES 8 B 423 LYS SER SER PHE ILE ASN THR LEU ARG GLY ILE GLY ASN SEQRES 9 B 423 GLU GLU GLU GLY ALA ALA LYS THR GLY VAL VAL GLU VAL SEQRES 10 B 423 THR MET GLU ARG HIS PRO TYR LYS HIS PRO ASN ILE PRO SEQRES 11 B 423 ASN VAL VAL PHE TRP ASP LEU PRO GLY ILE GLY SER THR SEQRES 12 B 423 ASN PHE PRO PRO ASN THR TYR LEU GLU LYS MET LYS PHE SEQRES 13 B 423 TYR GLU TYR ASP PHE PHE ILE ILE ILE SER ALA THR ARG SEQRES 14 B 423 PHE LYS LYS ASN ASP ILE ASP ILE ALA LYS ALA ILE SER SEQRES 15 B 423 MET MET LYS LYS GLU PHE TYR PHE VAL ARG THR LYS VAL SEQRES 16 B 423 ASP SER ASP ILE THR ASN GLU ALA ASP GLY LYS PRO GLN SEQRES 17 B 423 THR PHE ASP LYS GLU LYS VAL LEU GLN ASP ILE ARG LEU SEQRES 18 B 423 ASN CYS VAL ASN THR PHE ARG GLU ASN GLY ILE ALA GLU SEQRES 19 B 423 PRO PRO ILE PHE LEU LEU SER ASN LYS ASN VAL CYS HIS SEQRES 20 B 423 TYR ASP PHE PRO VAL LEU MET ASP LYS LEU ILE SER ASP SEQRES 21 B 423 LEU PRO ILE TYR LYS ARG HIS ASN PHE MET VAL SER LEU SEQRES 22 B 423 PRO ASN ILE THR ASP SER VAL ILE GLU LYS LYS ARG GLN SEQRES 23 B 423 PHE LEU LYS GLN ARG ILE TRP LEU GLU GLY PHE ALA ALA SEQRES 24 B 423 ASP LEU VAL ASN ILE ILE PRO SER LEU THR PHE LEU LEU SEQRES 25 B 423 ASP SER ASP LEU GLU THR LEU LYS LYS SER MET LYS PHE SEQRES 26 B 423 TYR ARG THR VAL PHE GLY VAL ASP GLU THR SER LEU GLN SEQRES 27 B 423 ARG LEU ALA ARG ASP TRP GLU ILE GLU VAL ASP GLN VAL SEQRES 28 B 423 GLU ALA MET ILE LYS SER PRO ALA VAL PHE LYS PRO THR SEQRES 29 B 423 ASP GLU GLU THR ILE GLN GLU ARG LEU SER ARG TYR ILE SEQRES 30 B 423 GLN GLU PHE CYS LEU ALA ASN GLY TYR LEU LEU PRO LYS SEQRES 31 B 423 ASN SER PHE LEU LYS GLU ILE PHE TYR LEU LYS TYR TYR SEQRES 32 B 423 PHE LEU ASP MET VAL THR GLU ASP ALA LYS THR LEU LEU SEQRES 33 B 423 LYS GLU ILE CYS LEU ARG ASN HET ADP A 601 27 HET BME A 602 4 HET EDO A 603 4 HET EDO A 604 4 HET EDO A 605 4 HET EDO A 606 4 HET GDP B 501 28 HET EDO B 502 4 HET EDO B 503 4 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM BME BETA-MERCAPTOETHANOL HETNAM EDO 1,2-ETHANEDIOL HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETSYN EDO ETHYLENE GLYCOL FORMUL 3 ADP C10 H15 N5 O10 P2 FORMUL 4 BME C2 H6 O S FORMUL 5 EDO 6(C2 H6 O2) FORMUL 9 GDP C10 H15 N5 O11 P2 FORMUL 12 HOH *483(H2 O) HELIX 1 1 GLU A 175 GLU A 188 1 14 HELIX 2 2 GLU A 188 GLU A 202 1 15 HELIX 3 3 PRO A 203 TRP A 215 1 13 HELIX 4 4 ASN A 271 ALA A 287 1 17 HELIX 5 5 LEU A 344 VAL A 354 1 11 HELIX 6 6 ARG A 358 LYS A 383 1 26 HELIX 7 7 THR A 391 ASP A 393 5 3 HELIX 8 8 ASP A 407 SER A 409 5 3 HELIX 9 9 SER A 421 VAL A 423 5 3 HELIX 10 10 PRO A 424 ALA A 428 5 5 HELIX 11 11 PRO A 429 LEU A 433 5 5 HELIX 12 12 THR A 441 LEU A 459 1 19 HELIX 13 13 PRO A 496 LEU A 507 1 12 HELIX 14 14 LEU A 516 GLU A 522 1 7 HELIX 15 15 THR A 523 SER A 538 1 16 HELIX 16 16 ASP B 15 LYS B 26 1 12 HELIX 17 17 SER B 35 LYS B 48 1 14 HELIX 18 18 ASN B 50 SER B 67 1 18 HELIX 19 19 GLY B 81 GLY B 91 1 11 HELIX 20 20 GLY B 103 MET B 109 1 7 HELIX 21 21 GLY B 129 THR B 133 5 5 HELIX 22 22 PRO B 136 MET B 144 1 9 HELIX 23 23 LYS B 145 TYR B 149 5 5 HELIX 24 24 LYS B 161 MET B 174 1 14 HELIX 25 25 LYS B 184 LYS B 196 1 13 HELIX 26 26 ASP B 201 ASN B 220 1 20 HELIX 27 27 ASP B 239 ASP B 250 1 12 HELIX 28 28 LEU B 251 TYR B 254 5 4 HELIX 29 29 LYS B 255 LEU B 263 1 9 HELIX 30 30 THR B 267 ALA B 289 1 23 HELIX 31 31 ILE B 295 THR B 299 5 5 HELIX 32 32 LEU B 302 PHE B 320 1 19 HELIX 33 33 ASP B 323 TRP B 334 1 12 HELIX 34 34 GLU B 337 ALA B 343 1 7 HELIX 35 35 MET B 344 ILE B 345 5 2 HELIX 36 36 LYS B 346 VAL B 350 5 5 HELIX 37 37 THR B 358 GLY B 375 1 18 HELIX 38 38 LYS B 385 CYS B 410 1 26 SHEET 1 A 7 GLU A 220 SER A 225 0 SHEET 2 A 7 GLU A 231 GLY A 243 -1 O ARG A 232 N VAL A 223 SHEET 3 A 7 SER A 246 ASP A 253 -1 O LEU A 250 N GLU A 238 SHEET 4 A 7 GLU A 258 THR A 266 -1 O PHE A 260 N VAL A 251 SHEET 5 A 7 VAL A 330 MET A 337 -1 O MET A 337 N ALA A 261 SHEET 6 A 7 ASP A 308 VAL A 312 -1 N VAL A 310 O LEU A 334 SHEET 7 A 7 GLU A 220 SER A 225 -1 N ASP A 224 O ALA A 311 SHEET 1 B 3 VAL A 342 ASP A 343 0 SHEET 2 B 3 LEU A 395 ILE A 397 -1 O ILE A 397 N VAL A 342 SHEET 3 B 3 LEU A 403 LEU A 405 -1 O MET A 404 N PHE A 396 SHEET 1 C 2 LEU A 385 HIS A 387 0 SHEET 2 C 2 LEU A 411 LYS A 413 -1 O TRP A 412 N VAL A 386 SHEET 1 D 2 ARG A 417 PRO A 419 0 SHEET 2 D 2 THR A 437 THR A 439 -1 O ALA A 438 N GLY A 418 SHEET 1 E 6 HIS B 112 LYS B 115 0 SHEET 2 E 6 VAL B 122 ASP B 126 -1 O PHE B 124 N TYR B 114 SHEET 3 E 6 LEU B 70 THR B 75 1 N VAL B 72 O TRP B 125 SHEET 4 E 6 PHE B 151 ALA B 157 1 O ILE B 155 N THR B 75 SHEET 5 E 6 TYR B 179 THR B 183 1 O TYR B 179 N ILE B 154 SHEET 6 E 6 ILE B 227 LEU B 229 1 O PHE B 228 N ARG B 182 SSBOND 1 CYS A 458 CYS A 492 1555 1555 2.05 SSBOND 2 CYS B 236 CYS B 410 1555 1555 2.03 LINK SG CYS A 195 S2 BME A 602 1555 1555 2.60 CISPEP 1 SER A 322 PRO A 323 0 1.96 SITE 1 AC1 21 ARG A 241 GLY A 243 ASP A 244 SER A 246 SITE 2 AC1 21 VAL A 248 ALA A 261 LYS A 263 LEU A 304 SITE 3 AC1 21 MET A 337 PRO A 338 ALA A 340 ASP A 343 SITE 4 AC1 21 ASP A 393 PHE A 396 HOH A 714 HOH A 732 SITE 5 AC1 21 HOH A 773 HOH A 837 HOH A 854 HOH A 868 SITE 6 AC1 21 HOH A 895 SITE 1 AC2 4 CYS A 195 ALA A 199 SER A 349 HOH A 887 SITE 1 AC3 5 LEU A 304 PRO A 306 ASP A 407 VAL A 408 SITE 2 AC3 5 HOH A 714 SITE 1 AC4 8 ASN A 218 ALA A 219 ALA A 443 ARG A 511 SITE 2 AC4 8 ARG A 512 ARG A 513 ARG A 514 HOH A 850 SITE 1 AC5 7 TYR A 454 PHE A 460 LEU A 461 PRO A 462 SITE 2 AC5 7 PHE A 463 GLY A 464 HOH A 704 SITE 1 AC6 4 LYS A 263 LEU A 279 LEU A 335 HOH A 854 SITE 1 AC7 16 GLY B 79 SER B 80 GLY B 81 LYS B 82 SITE 2 AC7 16 SER B 83 SER B 84 THR B 102 LYS B 184 SITE 3 AC7 16 ASP B 186 SER B 187 SER B 231 ASN B 232 SITE 4 AC7 16 LYS B 233 HOH B 700 HOH B 709 HOH B 822 SITE 1 AC8 3 TYR B 23 LYS B 279 HOH B 833 SITE 1 AC9 4 GLU A 277 PHE A 318 ILE B 294 HOH B 796 CRYST1 52.600 54.700 85.600 99.00 106.60 106.90 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019011 0.005776 0.007434 0.00000 SCALE2 0.000000 0.019107 0.005170 0.00000 SCALE3 0.000000 0.000000 0.012629 0.00000