data_4LVJ # _entry.id 4LVJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LVJ pdb_00004lvj 10.2210/pdb4lvj/pdb NDB NA2664 ? ? RCSB RCSB081138 ? ? WWPDB D_1000081138 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-24 2 'Structure model' 1 1 2017-10-18 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_struct_conn_angle 7 3 'Structure model' struct_conn 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 3 'Structure model' '_database_2.pdbx_DOI' 14 3 'Structure model' '_database_2.pdbx_database_accession' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 24 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 25 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 26 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 27 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 28 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 29 3 'Structure model' '_pdbx_struct_conn_angle.value' 30 3 'Structure model' '_struct_conn.pdbx_dist_value' 31 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 32 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 33 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 36 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 37 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 39 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 40 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 42 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 43 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 44 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 45 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 46 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 47 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LVJ _pdbx_database_status.recvd_initial_deposition_date 2013-07-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pluta, R.' 1 'Boer, D.R.' 2 'Coll, M.' 3 # _citation.id primary _citation.title 'Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistance.' _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_volume 114 _citation.page_first E6526 _citation.page_last E6535 _citation.year 2017 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 28739894 _citation.pdbx_database_id_DOI 10.1073/pnas.1702971114 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pluta, R.' 1 ? primary 'Boer, D.R.' 2 ? primary 'Lorenzo-Diaz, F.' 3 ? primary 'Russi, S.' 4 ? primary 'Gomez, H.' 5 ? primary 'Fernandez-Lopez, C.' 6 ? primary 'Perez-Luque, R.' 7 ? primary 'Orozco, M.' 8 ? primary 'Espinosa, M.' 9 ? primary 'Coll, M.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Plasmid recombination enzyme' 23168.918 1 ? ? 'Relaxase Domain of MobM protein' ? 2 polymer syn 'ACTTTAT oligonucleotide' 2087.409 1 ? ? 'oligonucleotide_1 mimicking pMV158 oriT DNA hairpin' ? 3 polymer syn 'ATAAAGTATAGTGTG oligonucleotide' 4672.070 1 ? ? 'oligonucleotide_2 mimicking pMV158 oriT DNA hairpin' ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 5 non-polymer syn 'ACETATE ION' 59.044 1 ? ? ? ? 6 water nat water 18.015 104 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mobilization protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; A ? 2 polydeoxyribonucleotide no no '(DA)(DC)(DT)(DT)(DT)(DA)(DT)' ACTTTAT B ? 3 polydeoxyribonucleotide no no '(DA)(DT)(DA)(DA)(DA)(DG)(DT)(DA)(DT)(DA)(DG)(DT)(DG)(DT)(DG)' ATAAAGTATAGTGTG C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MANGANESE (II) ION' MN 5 'ACETATE ION' ACT 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 MET n 1 4 VAL n 1 5 ALA n 1 6 ARG n 1 7 MET n 1 8 GLN n 1 9 LYS n 1 10 MET n 1 11 LYS n 1 12 ALA n 1 13 GLY n 1 14 ASN n 1 15 LEU n 1 16 GLY n 1 17 GLY n 1 18 ALA n 1 19 PHE n 1 20 LYS n 1 21 HIS n 1 22 ASN n 1 23 GLU n 1 24 ARG n 1 25 VAL n 1 26 PHE n 1 27 GLU n 1 28 THR n 1 29 HIS n 1 30 SER n 1 31 ASN n 1 32 LYS n 1 33 ASP n 1 34 ILE n 1 35 ASN n 1 36 PRO n 1 37 SER n 1 38 ARG n 1 39 SER n 1 40 HIS n 1 41 LEU n 1 42 ASN n 1 43 TYR n 1 44 GLU n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 ARG n 1 49 ASP n 1 50 ARG n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 TYR n 1 55 GLU n 1 56 LYS n 1 57 GLN n 1 58 ILE n 1 59 LYS n 1 60 ASP n 1 61 TYR n 1 62 VAL n 1 63 ASN n 1 64 GLU n 1 65 ASN n 1 66 LYS n 1 67 VAL n 1 68 SER n 1 69 ASN n 1 70 ARG n 1 71 ALA n 1 72 ILE n 1 73 ARG n 1 74 LYS n 1 75 ASP n 1 76 ALA n 1 77 VAL n 1 78 LEU n 1 79 CYS n 1 80 ASP n 1 81 GLU n 1 82 TRP n 1 83 ILE n 1 84 ILE n 1 85 THR n 1 86 SER n 1 87 ASP n 1 88 LYS n 1 89 ASP n 1 90 PHE n 1 91 PHE n 1 92 GLU n 1 93 LYS n 1 94 LEU n 1 95 ASP n 1 96 GLU n 1 97 GLU n 1 98 GLN n 1 99 THR n 1 100 ARG n 1 101 THR n 1 102 PHE n 1 103 PHE n 1 104 GLU n 1 105 THR n 1 106 ALA n 1 107 LYS n 1 108 ASN n 1 109 TYR n 1 110 PHE n 1 111 ALA n 1 112 GLU n 1 113 ASN n 1 114 TYR n 1 115 GLY n 1 116 GLU n 1 117 SER n 1 118 ASN n 1 119 ILE n 1 120 ALA n 1 121 TYR n 1 122 ALA n 1 123 SER n 1 124 VAL n 1 125 HIS n 1 126 LEU n 1 127 ASP n 1 128 GLU n 1 129 SER n 1 130 THR n 1 131 PRO n 1 132 HIS n 1 133 MET n 1 134 HIS n 1 135 MET n 1 136 GLY n 1 137 VAL n 1 138 VAL n 1 139 PRO n 1 140 PHE n 1 141 GLU n 1 142 ASN n 1 143 GLY n 1 144 LYS n 1 145 LEU n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 ALA n 1 150 MET n 1 151 PHE n 1 152 ASP n 1 153 ARG n 1 154 GLU n 1 155 GLU n 1 156 LEU n 1 157 LYS n 1 158 HIS n 1 159 ILE n 1 160 GLN n 1 161 GLU n 1 162 ASP n 1 163 LEU n 1 164 PRO n 1 165 ARG n 1 166 TYR n 1 167 MET n 1 168 SER n 1 169 ASP n 1 170 HIS n 1 171 GLY n 1 172 PHE n 1 173 GLU n 1 174 LEU n 1 175 GLU n 1 176 ARG n 1 177 GLY n 1 178 LYS n 1 179 LEU n 1 180 ASN n 1 181 SER n 1 182 GLU n 1 183 ALA n 1 184 LYS n 1 185 HIS n 1 186 LYS n 1 187 THR n 1 188 VAL n 1 189 ALA n 1 190 GLU n 1 191 PHE n 1 192 LYS n 1 193 ARG n 1 194 ALA n 1 195 MET n 1 196 ALA n 1 197 ASP n 1 198 MET n 2 1 DA n 2 2 DC n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DA n 2 7 DT n 3 1 DA n 3 2 DT n 3 3 DA n 3 4 DA n 3 5 DA n 3 6 DG n 3 7 DT n 3 8 DA n 3 9 DT n 3 10 DA n 3 11 DG n 3 12 DT n 3 13 DG n 3 14 DT n 3 15 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pre, mob' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1311 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Oligonucleotides were obtained from Biomers (Ulm, Germany).' 3 1 sample ? ? ? ? ? 'Oligonucleotides were obtained from Biomers (Ulm, Germany).' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACT non-polymer . 'ACETATE ION' ? 'C2 H3 O2 -1' 59.044 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 TYR 2 3 3 TYR TYR A . n A 1 3 MET 3 4 4 MET MET A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 ALA 5 6 6 ALA ALA A . n A 1 6 ARG 6 7 7 ARG ARG A . n A 1 7 MET 7 8 8 MET MET A . n A 1 8 GLN 8 9 9 GLN GLN A . n A 1 9 LYS 9 10 10 LYS LYS A . n A 1 10 MET 10 11 11 MET MET A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 GLY 13 14 14 GLY GLY A . n A 1 14 ASN 14 15 15 ASN ASN A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 GLY 16 17 17 GLY GLY A . n A 1 17 GLY 17 18 18 GLY GLY A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 PHE 19 20 20 PHE PHE A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 HIS 21 22 22 HIS HIS A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ARG 24 25 25 ARG ARG A . n A 1 25 VAL 25 26 26 VAL VAL A . n A 1 26 PHE 26 27 27 PHE PHE A . n A 1 27 GLU 27 28 ? ? ? A . n A 1 28 THR 28 29 ? ? ? A . n A 1 29 HIS 29 30 ? ? ? A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 ASN 31 32 32 ASN ASN A . n A 1 32 LYS 32 33 33 LYS LYS A . n A 1 33 ASP 33 34 34 ASP ASP A . n A 1 34 ILE 34 35 35 ILE ILE A . n A 1 35 ASN 35 36 36 ASN ASN A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 SER 37 38 38 SER SER A . n A 1 38 ARG 38 39 39 ARG ARG A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 HIS 40 41 41 HIS HIS A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 ASN 42 43 43 ASN ASN A . n A 1 43 TYR 43 44 44 TYR TYR A . n A 1 44 GLU 44 45 45 GLU GLU A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 ARG 48 49 49 ARG ARG A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 ARG 50 51 51 ARG ARG A . n A 1 51 SER 51 52 52 SER SER A . n A 1 52 VAL 52 53 53 VAL VAL A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 TYR 54 55 55 TYR TYR A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 LYS 56 57 57 LYS LYS A . n A 1 57 GLN 57 58 58 GLN GLN A . n A 1 58 ILE 58 59 59 ILE ILE A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 ASP 60 61 61 ASP ASP A . n A 1 61 TYR 61 62 62 TYR TYR A . n A 1 62 VAL 62 63 63 VAL VAL A . n A 1 63 ASN 63 64 64 ASN ASN A . n A 1 64 GLU 64 65 65 GLU GLU A . n A 1 65 ASN 65 66 66 ASN ASN A . n A 1 66 LYS 66 67 67 LYS LYS A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 SER 68 69 69 SER SER A . n A 1 69 ASN 69 70 70 ASN ASN A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 ILE 72 73 73 ILE ILE A . n A 1 73 ARG 73 74 74 ARG ARG A . n A 1 74 LYS 74 75 75 LYS LYS A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 VAL 77 78 78 VAL VAL A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 CYS 79 80 80 CYS CYS A . n A 1 80 ASP 80 81 81 ASP ASP A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 TRP 82 83 83 TRP TRP A . n A 1 83 ILE 83 84 84 ILE ILE A . n A 1 84 ILE 84 85 85 ILE ILE A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 SER 86 87 87 SER SER A . n A 1 87 ASP 87 88 88 ASP ASP A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 ASP 89 90 90 ASP ASP A . n A 1 90 PHE 90 91 91 PHE PHE A . n A 1 91 PHE 91 92 92 PHE PHE A . n A 1 92 GLU 92 93 93 GLU GLU A . n A 1 93 LYS 93 94 94 LYS LYS A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 GLU 96 97 97 GLU GLU A . n A 1 97 GLU 97 98 98 GLU GLU A . n A 1 98 GLN 98 99 99 GLN GLN A . n A 1 99 THR 99 100 100 THR THR A . n A 1 100 ARG 100 101 101 ARG ARG A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 PHE 103 104 104 PHE PHE A . n A 1 104 GLU 104 105 105 GLU GLU A . n A 1 105 THR 105 106 106 THR THR A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 ASN 108 109 109 ASN ASN A . n A 1 109 TYR 109 110 110 TYR TYR A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 ALA 111 112 112 ALA ALA A . n A 1 112 GLU 112 113 113 GLU GLU A . n A 1 113 ASN 113 114 114 ASN ASN A . n A 1 114 TYR 114 115 115 TYR TYR A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 GLU 116 117 117 GLU GLU A . n A 1 117 SER 117 118 118 SER SER A . n A 1 118 ASN 118 119 119 ASN ASN A . n A 1 119 ILE 119 120 120 ILE ILE A . n A 1 120 ALA 120 121 121 ALA ALA A . n A 1 121 TYR 121 122 122 TYR TYR A . n A 1 122 ALA 122 123 123 ALA ALA A . n A 1 123 SER 123 124 124 SER SER A . n A 1 124 VAL 124 125 125 VAL VAL A . n A 1 125 HIS 125 126 126 HIS HIS A . n A 1 126 LEU 126 127 127 LEU LEU A . n A 1 127 ASP 127 128 128 ASP ASP A . n A 1 128 GLU 128 129 129 GLU GLU A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 THR 130 131 131 THR THR A . n A 1 131 PRO 131 132 132 PRO PRO A . n A 1 132 HIS 132 133 133 HIS HIS A . n A 1 133 MET 133 134 134 MET MET A . n A 1 134 HIS 134 135 135 HIS HIS A . n A 1 135 MET 135 136 136 MET MET A . n A 1 136 GLY 136 137 137 GLY GLY A . n A 1 137 VAL 137 138 138 VAL VAL A . n A 1 138 VAL 138 139 139 VAL VAL A . n A 1 139 PRO 139 140 140 PRO PRO A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 ASN 142 143 143 ASN ASN A . n A 1 143 GLY 143 144 144 GLY GLY A . n A 1 144 LYS 144 145 145 LYS LYS A . n A 1 145 LEU 145 146 146 LEU LEU A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 SER 147 148 148 SER SER A . n A 1 148 LYS 148 149 149 LYS LYS A . n A 1 149 ALA 149 150 150 ALA ALA A . n A 1 150 MET 150 151 151 MET MET A . n A 1 151 PHE 151 152 152 PHE PHE A . n A 1 152 ASP 152 153 153 ASP ASP A . n A 1 153 ARG 153 154 154 ARG ARG A . n A 1 154 GLU 154 155 155 GLU GLU A . n A 1 155 GLU 155 156 156 GLU GLU A . n A 1 156 LEU 156 157 157 LEU LEU A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 HIS 158 159 159 HIS HIS A . n A 1 159 ILE 159 160 160 ILE ILE A . n A 1 160 GLN 160 161 161 GLN GLN A . n A 1 161 GLU 161 162 162 GLU GLU A . n A 1 162 ASP 162 163 163 ASP ASP A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 PRO 164 165 165 PRO PRO A . n A 1 165 ARG 165 166 166 ARG ARG A . n A 1 166 TYR 166 167 167 TYR TYR A . n A 1 167 MET 167 168 168 MET MET A . n A 1 168 SER 168 169 169 SER SER A . n A 1 169 ASP 169 170 170 ASP ASP A . n A 1 170 HIS 170 171 171 HIS HIS A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 PHE 172 173 173 PHE PHE A . n A 1 173 GLU 173 174 174 GLU GLU A . n A 1 174 LEU 174 175 175 LEU LEU A . n A 1 175 GLU 175 176 176 GLU GLU A . n A 1 176 ARG 176 177 177 ARG ARG A . n A 1 177 GLY 177 178 178 GLY GLY A . n A 1 178 LYS 178 179 179 LYS LYS A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 ASN 180 181 181 ASN ASN A . n A 1 181 SER 181 182 182 SER SER A . n A 1 182 GLU 182 183 183 GLU GLU A . n A 1 183 ALA 183 184 184 ALA ALA A . n A 1 184 LYS 184 185 185 LYS LYS A . n A 1 185 HIS 185 186 186 HIS HIS A . n A 1 186 LYS 186 187 187 LYS LYS A . n A 1 187 THR 187 188 188 THR THR A . n A 1 188 VAL 188 189 189 VAL VAL A . n A 1 189 ALA 189 190 190 ALA ALA A . n A 1 190 GLU 190 191 191 GLU GLU A . n A 1 191 PHE 191 192 192 PHE PHE A . n A 1 192 LYS 192 193 193 LYS LYS A . n A 1 193 ARG 193 194 194 ARG ARG A . n A 1 194 ALA 194 195 195 ALA ALA A . n A 1 195 MET 195 196 196 MET MET A . n A 1 196 ALA 196 197 ? ? ? A . n A 1 197 ASP 197 198 ? ? ? A . n A 1 198 MET 198 199 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DT 7 7 7 DT DT B . n C 3 1 DA 1 12 12 DA DA C . n C 3 2 DT 2 13 13 DT DT C . n C 3 3 DA 3 14 14 DA DA C . n C 3 4 DA 4 15 15 DA DA C . n C 3 5 DA 5 16 16 DA DA C . n C 3 6 DG 6 17 17 DG DG C . n C 3 7 DT 7 18 18 DT DT C . n C 3 8 DA 8 19 19 DA DA C . n C 3 9 DT 9 20 20 DT DT C . n C 3 10 DA 10 21 21 DA DA C . n C 3 11 DG 11 22 22 DG DG C . n C 3 12 DT 12 23 23 DT DT C . n C 3 13 DG 13 24 24 DG DG C . n C 3 14 DT 14 25 25 DT DT C . n C 3 15 DG 15 26 26 DG DG C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN 1 201 1 MN MN A . E 5 ACT 1 202 1 ACT ACT A . F 6 HOH 1 301 1 HOH HOH A . F 6 HOH 2 302 2 HOH HOH A . F 6 HOH 3 303 3 HOH HOH A . F 6 HOH 4 304 4 HOH HOH A . F 6 HOH 5 305 6 HOH HOH A . F 6 HOH 6 306 7 HOH HOH A . F 6 HOH 7 307 10 HOH HOH A . F 6 HOH 8 308 11 HOH HOH A . F 6 HOH 9 309 13 HOH HOH A . F 6 HOH 10 310 16 HOH HOH A . F 6 HOH 11 311 18 HOH HOH A . F 6 HOH 12 312 20 HOH HOH A . F 6 HOH 13 313 21 HOH HOH A . F 6 HOH 14 314 22 HOH HOH A . F 6 HOH 15 315 24 HOH HOH A . F 6 HOH 16 316 26 HOH HOH A . F 6 HOH 17 317 27 HOH HOH A . F 6 HOH 18 318 28 HOH HOH A . F 6 HOH 19 319 33 HOH HOH A . F 6 HOH 20 320 34 HOH HOH A . F 6 HOH 21 321 35 HOH HOH A . F 6 HOH 22 322 36 HOH HOH A . F 6 HOH 23 323 37 HOH HOH A . F 6 HOH 24 324 38 HOH HOH A . F 6 HOH 25 325 39 HOH HOH A . F 6 HOH 26 326 41 HOH HOH A . F 6 HOH 27 327 44 HOH HOH A . F 6 HOH 28 328 45 HOH HOH A . F 6 HOH 29 329 46 HOH HOH A . F 6 HOH 30 330 48 HOH HOH A . F 6 HOH 31 331 49 HOH HOH A . F 6 HOH 32 332 52 HOH HOH A . F 6 HOH 33 333 53 HOH HOH A . F 6 HOH 34 334 54 HOH HOH A . F 6 HOH 35 335 55 HOH HOH A . F 6 HOH 36 336 56 HOH HOH A . F 6 HOH 37 337 57 HOH HOH A . F 6 HOH 38 338 58 HOH HOH A . F 6 HOH 39 339 59 HOH HOH A . F 6 HOH 40 340 60 HOH HOH A . F 6 HOH 41 341 61 HOH HOH A . F 6 HOH 42 342 63 HOH HOH A . F 6 HOH 43 343 64 HOH HOH A . F 6 HOH 44 344 65 HOH HOH A . F 6 HOH 45 345 66 HOH HOH A . F 6 HOH 46 346 68 HOH HOH A . F 6 HOH 47 347 70 HOH HOH A . F 6 HOH 48 348 72 HOH HOH A . F 6 HOH 49 349 73 HOH HOH A . F 6 HOH 50 350 75 HOH HOH A . F 6 HOH 51 351 76 HOH HOH A . F 6 HOH 52 352 78 HOH HOH A . F 6 HOH 53 353 80 HOH HOH A . F 6 HOH 54 354 81 HOH HOH A . F 6 HOH 55 355 83 HOH HOH A . F 6 HOH 56 356 84 HOH HOH A . F 6 HOH 57 357 85 HOH HOH A . F 6 HOH 58 358 86 HOH HOH A . F 6 HOH 59 359 90 HOH HOH A . F 6 HOH 60 360 94 HOH HOH A . F 6 HOH 61 361 95 HOH HOH A . F 6 HOH 62 362 98 HOH HOH A . F 6 HOH 63 363 99 HOH HOH A . F 6 HOH 64 364 102 HOH HOH A . F 6 HOH 65 365 103 HOH HOH A . F 6 HOH 66 366 104 HOH HOH A . F 6 HOH 67 367 105 HOH HOH A . F 6 HOH 68 368 106 HOH HOH A . F 6 HOH 69 369 107 HOH HOH A . F 6 HOH 70 370 108 HOH HOH A . F 6 HOH 71 371 109 HOH HOH A . F 6 HOH 72 372 110 HOH HOH A . G 6 HOH 1 101 23 HOH HOH B . G 6 HOH 2 102 29 HOH HOH B . G 6 HOH 3 103 30 HOH HOH B . G 6 HOH 4 104 79 HOH HOH B . G 6 HOH 5 105 82 HOH HOH B . G 6 HOH 6 106 92 HOH HOH B . H 6 HOH 1 101 12 HOH HOH C . H 6 HOH 2 102 31 HOH HOH C . H 6 HOH 3 103 5 HOH HOH C . H 6 HOH 4 104 8 HOH HOH C . H 6 HOH 5 105 9 HOH HOH C . H 6 HOH 6 106 14 HOH HOH C . H 6 HOH 7 107 15 HOH HOH C . H 6 HOH 8 108 17 HOH HOH C . H 6 HOH 9 109 19 HOH HOH C . H 6 HOH 10 110 25 HOH HOH C . H 6 HOH 11 111 32 HOH HOH C . H 6 HOH 12 112 40 HOH HOH C . H 6 HOH 13 113 42 HOH HOH C . H 6 HOH 14 114 43 HOH HOH C . H 6 HOH 15 115 50 HOH HOH C . H 6 HOH 16 116 51 HOH HOH C . H 6 HOH 17 117 67 HOH HOH C . H 6 HOH 18 118 69 HOH HOH C . H 6 HOH 19 119 71 HOH HOH C . H 6 HOH 20 120 74 HOH HOH C . H 6 HOH 21 121 77 HOH HOH C . H 6 HOH 22 122 88 HOH HOH C . H 6 HOH 23 123 91 HOH HOH C . H 6 HOH 24 124 96 HOH HOH C . H 6 HOH 25 125 100 HOH HOH C . H 6 HOH 26 126 101 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BEST 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 iMOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4LVJ _cell.length_a 112.020 _cell.length_b 112.020 _cell.length_c 90.610 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LVJ _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4LVJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.14 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.6 _exptl_crystal_grow.pdbx_details '21% PEG 6000, 0.1M Sodium Acetate pH4.6. Cryo-protecting/soaking at pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87260 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.87260 # _reflns.entry_id 4LVJ _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 41.0 _reflns.d_resolution_high 2.17 _reflns.number_obs 16928 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.150 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.3 _reflns.B_iso_Wilson_estimate 28.3 _reflns.pdbx_redundancy 4.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.17 _reflns_shell.d_res_low 2.29 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LVJ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16926 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 35.22 _refine.ls_d_res_high 2.17 _refine.ls_percent_reflns_obs 97.35 _refine.ls_R_factor_obs 0.20322 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20125 _refine.ls_R_factor_R_free 0.24116 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 868 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 34.425 _refine.aniso_B[1][1] 0.00 _refine.aniso_B[2][2] 0.00 _refine.aniso_B[3][3] -0.01 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.236 _refine.pdbx_overall_ESU_R_Free 0.195 _refine.overall_SU_ML 0.159 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 12.770 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1577 _refine_hist.pdbx_number_atoms_nucleic_acid 449 _refine_hist.pdbx_number_atoms_ligand 5 _refine_hist.number_atoms_solvent 104 _refine_hist.number_atoms_total 2135 _refine_hist.d_res_high 2.17 _refine_hist.d_res_low 35.22 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.018 ? 2224 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.784 1.904 ? 3094 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.740 5.000 ? 217 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.730 24.526 ? 95 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.115 15.000 ? 330 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 21.355 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.112 0.200 ? 303 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1582 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.638 1.395 ? 821 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.050 2.082 ? 1037 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 0.903 1.367 ? 1403 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined 4.506 11.997 ? 3574 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.170 _refine_ls_shell.d_res_low 2.226 _refine_ls_shell.number_reflns_R_work 1266 _refine_ls_shell.R_factor_R_work 0.324 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.394 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4LVJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4LVJ _struct.title 'MobM Relaxase Domain (MOBV; Mob_Pre) bound to plasmid pMV158 oriT DNA (22nt). Mn-bound crystal structure at pH 5.5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LVJ _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'Protein-DNA complex, Pfam Family Mob_Pre (PF01076), MOBv Family, relaxase/endonuclease, oriT DNA, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? H N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP PRE_STRAG P13925 1 ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; 2 ? 2 PDB 4LVJ 4LVJ 2 ACTTTAT ? ? 3 PDB 4LVJ 4LVJ 3 ATAAAGTATAGTGTG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LVJ A 1 ? 198 ? P13925 2 ? 199 ? 2 199 2 2 4LVJ B 1 ? 7 ? 4LVJ 1 ? 7 ? 1 7 3 3 4LVJ C 1 ? 15 ? 4LVJ 12 ? 26 ? 12 26 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5130 ? 1 MORE -30 ? 1 'SSA (A^2)' 12230 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 11 ? GLU A 23 ? LYS A 12 GLU A 24 1 ? 13 HELX_P HELX_P2 2 ASN A 35 ? ASN A 42 ? ASN A 36 ASN A 43 5 ? 8 HELX_P HELX_P3 3 SER A 53 ? LYS A 66 ? SER A 54 LYS A 67 1 ? 14 HELX_P HELX_P4 4 ASP A 87 ? GLU A 92 ? ASP A 88 GLU A 93 1 ? 6 HELX_P HELX_P5 5 ASP A 95 ? GLY A 115 ? ASP A 96 GLY A 116 1 ? 21 HELX_P HELX_P6 6 SER A 146 ? PHE A 151 ? SER A 147 PHE A 152 1 ? 6 HELX_P HELX_P7 7 ASP A 152 ? HIS A 170 ? ASP A 153 HIS A 171 1 ? 19 HELX_P HELX_P8 8 THR A 187 ? MET A 195 ? THR A 188 MET A 196 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A HIS 21 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 22 A MN 201 1_555 ? ? ? ? ? ? ? 2.491 ? ? metalc2 metalc ? ? A HIS 125 ND1 ? ? ? 1_555 D MN . MN ? ? A HIS 126 A MN 201 1_555 ? ? ? ? ? ? ? 2.301 ? ? metalc3 metalc ? ? A GLU 128 OE2 ? ? ? 1_555 D MN . MN ? ? A GLU 129 A MN 201 1_555 ? ? ? ? ? ? ? 2.181 ? ? metalc4 metalc ? ? A HIS 132 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 133 A MN 201 1_555 ? ? ? ? ? ? ? 2.219 ? ? metalc5 metalc ? ? A HIS 134 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 135 A MN 201 1_555 ? ? ? ? ? ? ? 2.326 ? ? metalc6 metalc ? ? D MN . MN ? ? ? 1_555 C DG 15 "O3'" ? ? A MN 201 C DG 26 1_555 ? ? ? ? ? ? ? 2.237 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 1 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 1 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 3 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 3 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 4 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 4 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 3 N1 ? ? B DT 5 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 3 N6 ? ? B DT 5 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 6 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 6 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 7 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 7 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 12 N3 ? ? ? 1_555 C DG 15 O6 ? ? C DT 23 C DG 26 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? C DT 12 O2 ? ? ? 1_555 C DG 15 N1 ? ? C DT 23 C DG 26 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 21 ? A HIS 22 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 90.3 ? 2 NE2 ? A HIS 21 ? A HIS 22 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 93.1 ? 3 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 86.6 ? 4 NE2 ? A HIS 21 ? A HIS 22 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 170.7 ? 5 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 98.8 ? 6 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 89.8 ? 7 NE2 ? A HIS 21 ? A HIS 22 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 83.4 ? 8 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 90.5 ? 9 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 175.5 ? 10 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 94.1 ? 11 NE2 ? A HIS 21 ? A HIS 22 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 87.0 ? 12 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 172.6 ? 13 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 86.7 ? 14 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 84.3 ? 15 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 95.9 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 4 ? MET A 10 ? VAL A 5 MET A 11 A 2 CYS A 79 ? THR A 85 ? CYS A 80 THR A 86 A 3 HIS A 132 ? VAL A 137 ? HIS A 133 VAL A 138 A 4 ILE A 119 ? HIS A 125 ? ILE A 120 HIS A 126 A 5 TYR A 43 ? GLU A 44 ? TYR A 44 GLU A 45 B 1 PHE A 140 ? GLU A 141 ? PHE A 141 GLU A 142 B 2 LYS A 144 ? LEU A 145 ? LYS A 145 LEU A 146 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 8 ? N GLN A 9 O GLU A 81 ? O GLU A 82 A 2 3 N ASP A 80 ? N ASP A 81 O VAL A 137 ? O VAL A 138 A 3 4 O HIS A 132 ? O HIS A 133 N HIS A 125 ? N HIS A 126 A 4 5 O VAL A 124 ? O VAL A 125 N TYR A 43 ? N TYR A 44 B 1 2 N GLU A 141 ? N GLU A 142 O LYS A 144 ? O LYS A 145 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 201 ? 6 'BINDING SITE FOR RESIDUE MN A 201' AC2 Software A ACT 202 ? 3 'BINDING SITE FOR RESIDUE ACT A 202' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 21 ? HIS A 22 . ? 1_555 ? 2 AC1 6 HIS A 125 ? HIS A 126 . ? 1_555 ? 3 AC1 6 GLU A 128 ? GLU A 129 . ? 1_555 ? 4 AC1 6 HIS A 132 ? HIS A 133 . ? 1_555 ? 5 AC1 6 HIS A 134 ? HIS A 135 . ? 1_555 ? 6 AC1 6 DG C 15 ? DG C 26 . ? 1_555 ? 7 AC2 3 GLN A 57 ? GLN A 58 . ? 1_555 ? 8 AC2 3 TYR A 61 ? TYR A 62 . ? 1_555 ? 9 AC2 3 SER A 117 ? SER A 118 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 308 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 337 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 N1 B DT 3 ? ? C2 B DT 3 ? ? 1.426 1.376 0.050 0.008 N 2 1 C4 B DT 3 ? ? C5 B DT 3 ? ? 1.502 1.445 0.057 0.009 N 3 1 C5 B DT 3 ? ? C6 B DT 3 ? ? 1.387 1.339 0.048 0.007 N 4 1 N3 B DT 4 ? ? C4 B DT 4 ? ? 1.331 1.382 -0.051 0.008 N 5 1 C4 B DT 4 ? ? C5 B DT 4 ? ? 1.515 1.445 0.070 0.009 N 6 1 C5 B DT 4 ? ? C6 B DT 4 ? ? 1.395 1.339 0.056 0.007 N 7 1 N1 B DT 5 ? ? C2 B DT 5 ? ? 1.425 1.376 0.049 0.008 N 8 1 C5 B DT 5 ? ? C6 B DT 5 ? ? 1.396 1.339 0.057 0.007 N 9 1 C5 B DT 7 ? ? C6 B DT 7 ? ? 1.403 1.339 0.064 0.007 N 10 1 N1 C DT 13 ? ? C2 C DT 13 ? ? 1.440 1.376 0.064 0.008 N 11 1 C2 C DT 13 ? ? N3 C DT 13 ? ? 1.320 1.373 -0.053 0.008 N 12 1 N3 C DT 13 ? ? C4 C DT 13 ? ? 1.328 1.382 -0.054 0.008 N 13 1 C5 C DT 13 ? ? C6 C DT 13 ? ? 1.395 1.339 0.056 0.007 N 14 1 N3 C DT 18 ? ? C4 C DT 18 ? ? 1.316 1.382 -0.066 0.008 N 15 1 C5 C DT 18 ? ? C6 C DT 18 ? ? 1.388 1.339 0.049 0.007 N 16 1 C5 C DT 20 ? ? C6 C DT 20 ? ? 1.396 1.339 0.057 0.007 N 17 1 C4 C DT 23 ? ? C5 C DT 23 ? ? 1.503 1.445 0.058 0.009 N 18 1 C5 C DT 23 ? ? C6 C DT 23 ? ? 1.390 1.339 0.051 0.007 N 19 1 N3 C DT 25 ? ? C4 C DT 25 ? ? 1.328 1.382 -0.054 0.008 N 20 1 C5 C DT 25 ? ? C6 C DT 25 ? ? 1.389 1.339 0.050 0.007 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O5'" B DT 3 ? ? "C5'" B DT 3 ? ? "C4'" B DT 3 ? ? 96.30 109.40 -13.10 0.80 N 2 1 "O4'" B DT 3 ? ? "C1'" B DT 3 ? ? N1 B DT 3 ? ? 111.36 108.30 3.06 0.30 N 3 1 N1 B DT 3 ? ? C2 B DT 3 ? ? N3 B DT 3 ? ? 120.14 114.60 5.54 0.60 N 4 1 C2 B DT 3 ? ? N3 B DT 3 ? ? C4 B DT 3 ? ? 121.52 127.20 -5.68 0.60 N 5 1 N3 B DT 3 ? ? C4 B DT 3 ? ? C5 B DT 3 ? ? 119.86 115.20 4.66 0.60 N 6 1 C5 B DT 3 ? ? C6 B DT 3 ? ? N1 B DT 3 ? ? 119.56 123.70 -4.14 0.60 N 7 1 N3 B DT 3 ? ? C2 B DT 3 ? ? O2 B DT 3 ? ? 118.49 122.30 -3.81 0.60 N 8 1 "O4'" B DT 4 ? ? "C1'" B DT 4 ? ? N1 B DT 4 ? ? 103.43 108.00 -4.57 0.70 N 9 1 N1 B DT 4 ? ? C2 B DT 4 ? ? N3 B DT 4 ? ? 122.48 114.60 7.88 0.60 N 10 1 C2 B DT 4 ? ? N3 B DT 4 ? ? C4 B DT 4 ? ? 120.09 127.20 -7.11 0.60 N 11 1 N3 B DT 4 ? ? C4 B DT 4 ? ? C5 B DT 4 ? ? 120.12 115.20 4.92 0.60 N 12 1 C5 B DT 4 ? ? C6 B DT 4 ? ? N1 B DT 4 ? ? 119.88 123.70 -3.82 0.60 N 13 1 N3 B DT 4 ? ? C2 B DT 4 ? ? O2 B DT 4 ? ? 117.78 122.30 -4.52 0.60 N 14 1 "O5'" B DT 5 ? ? "C5'" B DT 5 ? ? "C4'" B DT 5 ? ? 101.73 109.40 -7.67 0.80 N 15 1 N1 B DT 5 ? ? C2 B DT 5 ? ? N3 B DT 5 ? ? 121.65 114.60 7.05 0.60 N 16 1 C2 B DT 5 ? ? N3 B DT 5 ? ? C4 B DT 5 ? ? 119.54 127.20 -7.66 0.60 N 17 1 N3 B DT 5 ? ? C4 B DT 5 ? ? C5 B DT 5 ? ? 121.79 115.20 6.59 0.60 N 18 1 C5 B DT 5 ? ? C4 B DT 5 ? ? O4 B DT 5 ? ? 119.79 124.90 -5.11 0.70 N 19 1 C4 B DT 5 ? ? C5 B DT 5 ? ? C7 B DT 5 ? ? 122.88 119.00 3.88 0.60 N 20 1 "O5'" B DT 7 ? ? P B DT 7 ? ? OP2 B DT 7 ? ? 98.33 105.70 -7.37 0.90 N 21 1 "O4'" B DT 7 ? ? "C1'" B DT 7 ? ? N1 B DT 7 ? ? 111.54 108.30 3.24 0.30 N 22 1 N1 B DT 7 ? ? C2 B DT 7 ? ? N3 B DT 7 ? ? 122.32 114.60 7.72 0.60 N 23 1 C2 B DT 7 ? ? N3 B DT 7 ? ? C4 B DT 7 ? ? 120.56 127.20 -6.64 0.60 N 24 1 N3 B DT 7 ? ? C4 B DT 7 ? ? C5 B DT 7 ? ? 119.09 115.20 3.89 0.60 N 25 1 C5 B DT 7 ? ? C6 B DT 7 ? ? N1 B DT 7 ? ? 119.45 123.70 -4.25 0.60 N 26 1 C5 B DT 7 ? ? C4 B DT 7 ? ? O4 B DT 7 ? ? 120.68 124.90 -4.22 0.70 N 27 1 N1 C DT 13 ? ? C2 C DT 13 ? ? N3 C DT 13 ? ? 122.11 114.60 7.51 0.60 N 28 1 C2 C DT 13 ? ? N3 C DT 13 ? ? C4 C DT 13 ? ? 120.62 127.20 -6.58 0.60 N 29 1 N3 C DT 13 ? ? C4 C DT 13 ? ? C5 C DT 13 ? ? 120.15 115.20 4.95 0.60 N 30 1 C5 C DT 13 ? ? C6 C DT 13 ? ? N1 C DT 13 ? ? 119.06 123.70 -4.64 0.60 N 31 1 N3 C DT 13 ? ? C2 C DT 13 ? ? O2 C DT 13 ? ? 115.13 122.30 -7.17 0.60 N 32 1 "O4'" C DT 18 ? ? "C1'" C DT 18 ? ? N1 C DT 18 ? ? 114.22 108.30 5.92 0.30 N 33 1 N1 C DT 18 ? ? C2 C DT 18 ? ? N3 C DT 18 ? ? 122.41 114.60 7.81 0.60 N 34 1 C2 C DT 18 ? ? N3 C DT 18 ? ? C4 C DT 18 ? ? 120.75 127.20 -6.45 0.60 N 35 1 N3 C DT 18 ? ? C4 C DT 18 ? ? C5 C DT 18 ? ? 119.21 115.20 4.01 0.60 N 36 1 C5 C DT 18 ? ? C6 C DT 18 ? ? N1 C DT 18 ? ? 118.53 123.70 -5.17 0.60 N 37 1 N3 C DT 18 ? ? C2 C DT 18 ? ? O2 C DT 18 ? ? 117.30 122.30 -5.00 0.60 N 38 1 N1 C DT 20 ? ? C2 C DT 20 ? ? N3 C DT 20 ? ? 120.68 114.60 6.08 0.60 N 39 1 C2 C DT 20 ? ? N3 C DT 20 ? ? C4 C DT 20 ? ? 120.78 127.20 -6.42 0.60 N 40 1 N3 C DT 20 ? ? C4 C DT 20 ? ? C5 C DT 20 ? ? 119.87 115.20 4.67 0.60 N 41 1 C5 C DT 20 ? ? C6 C DT 20 ? ? N1 C DT 20 ? ? 119.13 123.70 -4.57 0.60 N 42 1 C5 C DT 20 ? ? C4 C DT 20 ? ? O4 C DT 20 ? ? 118.62 124.90 -6.28 0.70 N 43 1 "O4'" C DT 23 ? ? "C1'" C DT 23 ? ? N1 C DT 23 ? ? 111.00 108.30 2.70 0.30 N 44 1 N1 C DT 23 ? ? C2 C DT 23 ? ? N3 C DT 23 ? ? 123.15 114.60 8.55 0.60 N 45 1 C2 C DT 23 ? ? N3 C DT 23 ? ? C4 C DT 23 ? ? 118.98 127.20 -8.22 0.60 N 46 1 N3 C DT 23 ? ? C4 C DT 23 ? ? C5 C DT 23 ? ? 119.97 115.20 4.77 0.60 N 47 1 C5 C DT 23 ? ? C6 C DT 23 ? ? N1 C DT 23 ? ? 119.49 123.70 -4.21 0.60 N 48 1 N3 C DT 23 ? ? C2 C DT 23 ? ? O2 C DT 23 ? ? 118.21 122.30 -4.09 0.60 N 49 1 "O4'" C DT 25 ? ? "C1'" C DT 25 ? ? N1 C DT 25 ? ? 112.06 108.30 3.76 0.30 N 50 1 N1 C DT 25 ? ? C2 C DT 25 ? ? N3 C DT 25 ? ? 122.50 114.60 7.90 0.60 N 51 1 C2 C DT 25 ? ? N3 C DT 25 ? ? C4 C DT 25 ? ? 120.75 127.20 -6.45 0.60 N 52 1 N3 C DT 25 ? ? C4 C DT 25 ? ? C5 C DT 25 ? ? 119.21 115.20 4.01 0.60 N 53 1 N3 C DT 25 ? ? C2 C DT 25 ? ? O2 C DT 25 ? ? 117.49 122.30 -4.81 0.60 N 54 1 C4 C DT 25 ? ? C5 C DT 25 ? ? C7 C DT 25 ? ? 123.48 119.00 4.48 0.60 N 55 1 C6 C DT 25 ? ? C5 C DT 25 ? ? C7 C DT 25 ? ? 118.74 122.90 -4.16 0.60 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL A 26 ? A -105.55 59.95 2 1 THR A 86 ? ? -165.18 -165.03 3 1 SER A 87 ? ? -166.42 -162.79 4 1 ALA A 123 ? ? -151.55 87.35 5 1 GLU A 129 ? ? -110.10 -159.80 6 1 PRO A 140 ? ? -81.13 49.98 7 1 LEU A 175 ? B -163.42 119.07 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -9.8533 46.2920 -1.0234 0.0175 0.1948 0.2189 -0.0115 0.0146 0.0012 0.1999 2.3312 3.6147 0.6564 0.0553 0.7510 -0.0267 0.0047 -0.0395 -0.1009 -0.0378 0.0151 -0.1972 -0.2506 0.0645 'X-RAY DIFFRACTION' 2 ? refined -12.4513 42.3003 -14.8123 0.1379 0.3014 0.1685 0.0160 -0.0339 -0.0535 6.7256 7.7985 8.5454 1.6645 -0.5410 -4.4058 0.0034 0.7264 0.3777 -0.1376 0.2430 0.8957 -0.0890 -0.7929 -0.2464 'X-RAY DIFFRACTION' 3 ? refined -18.0790 32.6028 6.4363 0.1744 0.2056 0.2508 -0.1799 0.0173 -0.0291 4.1253 4.9178 15.9383 -0.9259 0.6482 -3.6009 -0.0947 -0.1071 -0.3191 0.0377 0.0745 0.6526 0.9430 -1.2532 0.0201 'X-RAY DIFFRACTION' 4 ? refined -3.9974 39.5156 -1.6170 0.0502 0.0539 0.1094 -0.0030 -0.0108 -0.0071 2.6175 0.8747 5.9851 -0.5114 -1.6010 0.3879 0.0331 0.0833 -0.1136 0.0120 -0.0349 -0.0160 0.3548 0.2512 0.0018 'X-RAY DIFFRACTION' 5 ? refined 4.3994 49.6315 0.1565 0.0685 0.2223 0.1337 -0.0586 0.0043 0.0140 4.1288 5.0911 4.1121 -1.9999 -0.2618 -0.0622 0.1611 0.2319 0.4237 -0.1640 -0.1035 -0.3344 -0.4211 0.5850 -0.0576 'X-RAY DIFFRACTION' 6 ? refined -16.1144 47.9123 23.6832 0.1932 0.2319 0.1564 0.0251 0.0589 -0.0800 10.9143 13.3276 5.8980 6.5839 0.7240 -3.2676 -0.1150 -0.6936 0.6277 1.0271 -0.0682 0.2130 -0.2895 -0.2385 0.1832 'X-RAY DIFFRACTION' 7 ? refined -13.6686 44.1716 24.3618 0.4496 0.5078 0.0924 0.1519 0.0678 0.0511 5.8996 4.6254 10.3335 -1.3351 -6.5694 -0.9893 -0.1850 -0.9920 -0.1724 0.4794 0.2479 0.5258 0.7148 1.5601 -0.0629 'X-RAY DIFFRACTION' 8 ? refined -1.0564 52.7654 0.7811 0.3929 0.0821 0.1995 -0.1701 0.0924 -0.0079 8.0641 0.3087 3.2496 -0.7712 0.9497 0.7356 0.1409 -0.0583 0.2821 -0.1989 0.0884 -0.0640 -0.8541 0.4156 -0.2292 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 23 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 24 ? ? A 48 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 49 ? ? A 71 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 72 ? ? A 152 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 153 ? ? A 196 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 1 ? ? B 7 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 C 12 ? ? C 18 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 C 19 ? ? C 26 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 28 ? A GLU 27 2 1 Y 1 A THR 29 ? A THR 28 3 1 Y 1 A HIS 30 ? A HIS 29 4 1 Y 1 A ALA 197 ? A ALA 196 5 1 Y 1 A ASP 198 ? A ASP 197 6 1 Y 1 A MET 199 ? A MET 198 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACT C C N N 1 ACT O O N N 2 ACT OXT O N N 3 ACT CH3 C N N 4 ACT H1 H N N 5 ACT H2 H N N 6 ACT H3 H N N 7 ALA N N N N 8 ALA CA C N S 9 ALA C C N N 10 ALA O O N N 11 ALA CB C N N 12 ALA OXT O N N 13 ALA H H N N 14 ALA H2 H N N 15 ALA HA H N N 16 ALA HB1 H N N 17 ALA HB2 H N N 18 ALA HB3 H N N 19 ALA HXT H N N 20 ARG N N N N 21 ARG CA C N S 22 ARG C C N N 23 ARG O O N N 24 ARG CB C N N 25 ARG CG C N N 26 ARG CD C N N 27 ARG NE N N N 28 ARG CZ C N N 29 ARG NH1 N N N 30 ARG NH2 N N N 31 ARG OXT O N N 32 ARG H H N N 33 ARG H2 H N N 34 ARG HA H N N 35 ARG HB2 H N N 36 ARG HB3 H N N 37 ARG HG2 H N N 38 ARG HG3 H N N 39 ARG HD2 H N N 40 ARG HD3 H N N 41 ARG HE H N N 42 ARG HH11 H N N 43 ARG HH12 H N N 44 ARG HH21 H N N 45 ARG HH22 H N N 46 ARG HXT H N N 47 ASN N N N N 48 ASN CA C N S 49 ASN C C N N 50 ASN O O N N 51 ASN CB C N N 52 ASN CG C N N 53 ASN OD1 O N N 54 ASN ND2 N N N 55 ASN OXT O N N 56 ASN H H N N 57 ASN H2 H N N 58 ASN HA H N N 59 ASN HB2 H N N 60 ASN HB3 H N N 61 ASN HD21 H N N 62 ASN HD22 H N N 63 ASN HXT H N N 64 ASP N N N N 65 ASP CA C N S 66 ASP C C N N 67 ASP O O N N 68 ASP CB C N N 69 ASP CG C N N 70 ASP OD1 O N N 71 ASP OD2 O N N 72 ASP OXT O N N 73 ASP H H N N 74 ASP H2 H N N 75 ASP HA H N N 76 ASP HB2 H N N 77 ASP HB3 H N N 78 ASP HD2 H N N 79 ASP HXT H N N 80 CYS N N N N 81 CYS CA C N R 82 CYS C C N N 83 CYS O O N N 84 CYS CB C N N 85 CYS SG S N N 86 CYS OXT O N N 87 CYS H H N N 88 CYS H2 H N N 89 CYS HA H N N 90 CYS HB2 H N N 91 CYS HB3 H N N 92 CYS HG H N N 93 CYS HXT H N N 94 DA OP3 O N N 95 DA P P N N 96 DA OP1 O N N 97 DA OP2 O N N 98 DA "O5'" O N N 99 DA "C5'" C N N 100 DA "C4'" C N R 101 DA "O4'" O N N 102 DA "C3'" C N S 103 DA "O3'" O N N 104 DA "C2'" C N N 105 DA "C1'" C N R 106 DA N9 N Y N 107 DA C8 C Y N 108 DA N7 N Y N 109 DA C5 C Y N 110 DA C6 C Y N 111 DA N6 N N N 112 DA N1 N Y N 113 DA C2 C Y N 114 DA N3 N Y N 115 DA C4 C Y N 116 DA HOP3 H N N 117 DA HOP2 H N N 118 DA "H5'" H N N 119 DA "H5''" H N N 120 DA "H4'" H N N 121 DA "H3'" H N N 122 DA "HO3'" H N N 123 DA "H2'" H N N 124 DA "H2''" H N N 125 DA "H1'" H N N 126 DA H8 H N N 127 DA H61 H N N 128 DA H62 H N N 129 DA H2 H N N 130 DC OP3 O N N 131 DC P P N N 132 DC OP1 O N N 133 DC OP2 O N N 134 DC "O5'" O N N 135 DC "C5'" C N N 136 DC "C4'" C N R 137 DC "O4'" O N N 138 DC "C3'" C N S 139 DC "O3'" O N N 140 DC "C2'" C N N 141 DC "C1'" C N R 142 DC N1 N N N 143 DC C2 C N N 144 DC O2 O N N 145 DC N3 N N N 146 DC C4 C N N 147 DC N4 N N N 148 DC C5 C N N 149 DC C6 C N N 150 DC HOP3 H N N 151 DC HOP2 H N N 152 DC "H5'" H N N 153 DC "H5''" H N N 154 DC "H4'" H N N 155 DC "H3'" H N N 156 DC "HO3'" H N N 157 DC "H2'" H N N 158 DC "H2''" H N N 159 DC "H1'" H N N 160 DC H41 H N N 161 DC H42 H N N 162 DC H5 H N N 163 DC H6 H N N 164 DG OP3 O N N 165 DG P P N N 166 DG OP1 O N N 167 DG OP2 O N N 168 DG "O5'" O N N 169 DG "C5'" C N N 170 DG "C4'" C N R 171 DG "O4'" O N N 172 DG "C3'" C N S 173 DG "O3'" O N N 174 DG "C2'" C N N 175 DG "C1'" C N R 176 DG N9 N Y N 177 DG C8 C Y N 178 DG N7 N Y N 179 DG C5 C Y N 180 DG C6 C N N 181 DG O6 O N N 182 DG N1 N N N 183 DG C2 C N N 184 DG N2 N N N 185 DG N3 N N N 186 DG C4 C Y N 187 DG HOP3 H N N 188 DG HOP2 H N N 189 DG "H5'" H N N 190 DG "H5''" H N N 191 DG "H4'" H N N 192 DG "H3'" H N N 193 DG "HO3'" H N N 194 DG "H2'" H N N 195 DG "H2''" H N N 196 DG "H1'" H N N 197 DG H8 H N N 198 DG H1 H N N 199 DG H21 H N N 200 DG H22 H N N 201 DT OP3 O N N 202 DT P P N N 203 DT OP1 O N N 204 DT OP2 O N N 205 DT "O5'" O N N 206 DT "C5'" C N N 207 DT "C4'" C N R 208 DT "O4'" O N N 209 DT "C3'" C N S 210 DT "O3'" O N N 211 DT "C2'" C N N 212 DT "C1'" C N R 213 DT N1 N N N 214 DT C2 C N N 215 DT O2 O N N 216 DT N3 N N N 217 DT C4 C N N 218 DT O4 O N N 219 DT C5 C N N 220 DT C7 C N N 221 DT C6 C N N 222 DT HOP3 H N N 223 DT HOP2 H N N 224 DT "H5'" H N N 225 DT "H5''" H N N 226 DT "H4'" H N N 227 DT "H3'" H N N 228 DT "HO3'" H N N 229 DT "H2'" H N N 230 DT "H2''" H N N 231 DT "H1'" H N N 232 DT H3 H N N 233 DT H71 H N N 234 DT H72 H N N 235 DT H73 H N N 236 DT H6 H N N 237 GLN N N N N 238 GLN CA C N S 239 GLN C C N N 240 GLN O O N N 241 GLN CB C N N 242 GLN CG C N N 243 GLN CD C N N 244 GLN OE1 O N N 245 GLN NE2 N N N 246 GLN OXT O N N 247 GLN H H N N 248 GLN H2 H N N 249 GLN HA H N N 250 GLN HB2 H N N 251 GLN HB3 H N N 252 GLN HG2 H N N 253 GLN HG3 H N N 254 GLN HE21 H N N 255 GLN HE22 H N N 256 GLN HXT H N N 257 GLU N N N N 258 GLU CA C N S 259 GLU C C N N 260 GLU O O N N 261 GLU CB C N N 262 GLU CG C N N 263 GLU CD C N N 264 GLU OE1 O N N 265 GLU OE2 O N N 266 GLU OXT O N N 267 GLU H H N N 268 GLU H2 H N N 269 GLU HA H N N 270 GLU HB2 H N N 271 GLU HB3 H N N 272 GLU HG2 H N N 273 GLU HG3 H N N 274 GLU HE2 H N N 275 GLU HXT H N N 276 GLY N N N N 277 GLY CA C N N 278 GLY C C N N 279 GLY O O N N 280 GLY OXT O N N 281 GLY H H N N 282 GLY H2 H N N 283 GLY HA2 H N N 284 GLY HA3 H N N 285 GLY HXT H N N 286 HIS N N N N 287 HIS CA C N S 288 HIS C C N N 289 HIS O O N N 290 HIS CB C N N 291 HIS CG C Y N 292 HIS ND1 N Y N 293 HIS CD2 C Y N 294 HIS CE1 C Y N 295 HIS NE2 N Y N 296 HIS OXT O N N 297 HIS H H N N 298 HIS H2 H N N 299 HIS HA H N N 300 HIS HB2 H N N 301 HIS HB3 H N N 302 HIS HD1 H N N 303 HIS HD2 H N N 304 HIS HE1 H N N 305 HIS HE2 H N N 306 HIS HXT H N N 307 HOH O O N N 308 HOH H1 H N N 309 HOH H2 H N N 310 ILE N N N N 311 ILE CA C N S 312 ILE C C N N 313 ILE O O N N 314 ILE CB C N S 315 ILE CG1 C N N 316 ILE CG2 C N N 317 ILE CD1 C N N 318 ILE OXT O N N 319 ILE H H N N 320 ILE H2 H N N 321 ILE HA H N N 322 ILE HB H N N 323 ILE HG12 H N N 324 ILE HG13 H N N 325 ILE HG21 H N N 326 ILE HG22 H N N 327 ILE HG23 H N N 328 ILE HD11 H N N 329 ILE HD12 H N N 330 ILE HD13 H N N 331 ILE HXT H N N 332 LEU N N N N 333 LEU CA C N S 334 LEU C C N N 335 LEU O O N N 336 LEU CB C N N 337 LEU CG C N N 338 LEU CD1 C N N 339 LEU CD2 C N N 340 LEU OXT O N N 341 LEU H H N N 342 LEU H2 H N N 343 LEU HA H N N 344 LEU HB2 H N N 345 LEU HB3 H N N 346 LEU HG H N N 347 LEU HD11 H N N 348 LEU HD12 H N N 349 LEU HD13 H N N 350 LEU HD21 H N N 351 LEU HD22 H N N 352 LEU HD23 H N N 353 LEU HXT H N N 354 LYS N N N N 355 LYS CA C N S 356 LYS C C N N 357 LYS O O N N 358 LYS CB C N N 359 LYS CG C N N 360 LYS CD C N N 361 LYS CE C N N 362 LYS NZ N N N 363 LYS OXT O N N 364 LYS H H N N 365 LYS H2 H N N 366 LYS HA H N N 367 LYS HB2 H N N 368 LYS HB3 H N N 369 LYS HG2 H N N 370 LYS HG3 H N N 371 LYS HD2 H N N 372 LYS HD3 H N N 373 LYS HE2 H N N 374 LYS HE3 H N N 375 LYS HZ1 H N N 376 LYS HZ2 H N N 377 LYS HZ3 H N N 378 LYS HXT H N N 379 MET N N N N 380 MET CA C N S 381 MET C C N N 382 MET O O N N 383 MET CB C N N 384 MET CG C N N 385 MET SD S N N 386 MET CE C N N 387 MET OXT O N N 388 MET H H N N 389 MET H2 H N N 390 MET HA H N N 391 MET HB2 H N N 392 MET HB3 H N N 393 MET HG2 H N N 394 MET HG3 H N N 395 MET HE1 H N N 396 MET HE2 H N N 397 MET HE3 H N N 398 MET HXT H N N 399 MN MN MN N N 400 PHE N N N N 401 PHE CA C N S 402 PHE C C N N 403 PHE O O N N 404 PHE CB C N N 405 PHE CG C Y N 406 PHE CD1 C Y N 407 PHE CD2 C Y N 408 PHE CE1 C Y N 409 PHE CE2 C Y N 410 PHE CZ C Y N 411 PHE OXT O N N 412 PHE H H N N 413 PHE H2 H N N 414 PHE HA H N N 415 PHE HB2 H N N 416 PHE HB3 H N N 417 PHE HD1 H N N 418 PHE HD2 H N N 419 PHE HE1 H N N 420 PHE HE2 H N N 421 PHE HZ H N N 422 PHE HXT H N N 423 PRO N N N N 424 PRO CA C N S 425 PRO C C N N 426 PRO O O N N 427 PRO CB C N N 428 PRO CG C N N 429 PRO CD C N N 430 PRO OXT O N N 431 PRO H H N N 432 PRO HA H N N 433 PRO HB2 H N N 434 PRO HB3 H N N 435 PRO HG2 H N N 436 PRO HG3 H N N 437 PRO HD2 H N N 438 PRO HD3 H N N 439 PRO HXT H N N 440 SER N N N N 441 SER CA C N S 442 SER C C N N 443 SER O O N N 444 SER CB C N N 445 SER OG O N N 446 SER OXT O N N 447 SER H H N N 448 SER H2 H N N 449 SER HA H N N 450 SER HB2 H N N 451 SER HB3 H N N 452 SER HG H N N 453 SER HXT H N N 454 THR N N N N 455 THR CA C N S 456 THR C C N N 457 THR O O N N 458 THR CB C N R 459 THR OG1 O N N 460 THR CG2 C N N 461 THR OXT O N N 462 THR H H N N 463 THR H2 H N N 464 THR HA H N N 465 THR HB H N N 466 THR HG1 H N N 467 THR HG21 H N N 468 THR HG22 H N N 469 THR HG23 H N N 470 THR HXT H N N 471 TRP N N N N 472 TRP CA C N S 473 TRP C C N N 474 TRP O O N N 475 TRP CB C N N 476 TRP CG C Y N 477 TRP CD1 C Y N 478 TRP CD2 C Y N 479 TRP NE1 N Y N 480 TRP CE2 C Y N 481 TRP CE3 C Y N 482 TRP CZ2 C Y N 483 TRP CZ3 C Y N 484 TRP CH2 C Y N 485 TRP OXT O N N 486 TRP H H N N 487 TRP H2 H N N 488 TRP HA H N N 489 TRP HB2 H N N 490 TRP HB3 H N N 491 TRP HD1 H N N 492 TRP HE1 H N N 493 TRP HE3 H N N 494 TRP HZ2 H N N 495 TRP HZ3 H N N 496 TRP HH2 H N N 497 TRP HXT H N N 498 TYR N N N N 499 TYR CA C N S 500 TYR C C N N 501 TYR O O N N 502 TYR CB C N N 503 TYR CG C Y N 504 TYR CD1 C Y N 505 TYR CD2 C Y N 506 TYR CE1 C Y N 507 TYR CE2 C Y N 508 TYR CZ C Y N 509 TYR OH O N N 510 TYR OXT O N N 511 TYR H H N N 512 TYR H2 H N N 513 TYR HA H N N 514 TYR HB2 H N N 515 TYR HB3 H N N 516 TYR HD1 H N N 517 TYR HD2 H N N 518 TYR HE1 H N N 519 TYR HE2 H N N 520 TYR HH H N N 521 TYR HXT H N N 522 VAL N N N N 523 VAL CA C N S 524 VAL C C N N 525 VAL O O N N 526 VAL CB C N N 527 VAL CG1 C N N 528 VAL CG2 C N N 529 VAL OXT O N N 530 VAL H H N N 531 VAL H2 H N N 532 VAL HA H N N 533 VAL HB H N N 534 VAL HG11 H N N 535 VAL HG12 H N N 536 VAL HG13 H N N 537 VAL HG21 H N N 538 VAL HG22 H N N 539 VAL HG23 H N N 540 VAL HXT H N N 541 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACT C O doub N N 1 ACT C OXT sing N N 2 ACT C CH3 sing N N 3 ACT CH3 H1 sing N N 4 ACT CH3 H2 sing N N 5 ACT CH3 H3 sing N N 6 ALA N CA sing N N 7 ALA N H sing N N 8 ALA N H2 sing N N 9 ALA CA C sing N N 10 ALA CA CB sing N N 11 ALA CA HA sing N N 12 ALA C O doub N N 13 ALA C OXT sing N N 14 ALA CB HB1 sing N N 15 ALA CB HB2 sing N N 16 ALA CB HB3 sing N N 17 ALA OXT HXT sing N N 18 ARG N CA sing N N 19 ARG N H sing N N 20 ARG N H2 sing N N 21 ARG CA C sing N N 22 ARG CA CB sing N N 23 ARG CA HA sing N N 24 ARG C O doub N N 25 ARG C OXT sing N N 26 ARG CB CG sing N N 27 ARG CB HB2 sing N N 28 ARG CB HB3 sing N N 29 ARG CG CD sing N N 30 ARG CG HG2 sing N N 31 ARG CG HG3 sing N N 32 ARG CD NE sing N N 33 ARG CD HD2 sing N N 34 ARG CD HD3 sing N N 35 ARG NE CZ sing N N 36 ARG NE HE sing N N 37 ARG CZ NH1 sing N N 38 ARG CZ NH2 doub N N 39 ARG NH1 HH11 sing N N 40 ARG NH1 HH12 sing N N 41 ARG NH2 HH21 sing N N 42 ARG NH2 HH22 sing N N 43 ARG OXT HXT sing N N 44 ASN N CA sing N N 45 ASN N H sing N N 46 ASN N H2 sing N N 47 ASN CA C sing N N 48 ASN CA CB sing N N 49 ASN CA HA sing N N 50 ASN C O doub N N 51 ASN C OXT sing N N 52 ASN CB CG sing N N 53 ASN CB HB2 sing N N 54 ASN CB HB3 sing N N 55 ASN CG OD1 doub N N 56 ASN CG ND2 sing N N 57 ASN ND2 HD21 sing N N 58 ASN ND2 HD22 sing N N 59 ASN OXT HXT sing N N 60 ASP N CA sing N N 61 ASP N H sing N N 62 ASP N H2 sing N N 63 ASP CA C sing N N 64 ASP CA CB sing N N 65 ASP CA HA sing N N 66 ASP C O doub N N 67 ASP C OXT sing N N 68 ASP CB CG sing N N 69 ASP CB HB2 sing N N 70 ASP CB HB3 sing N N 71 ASP CG OD1 doub N N 72 ASP CG OD2 sing N N 73 ASP OD2 HD2 sing N N 74 ASP OXT HXT sing N N 75 CYS N CA sing N N 76 CYS N H sing N N 77 CYS N H2 sing N N 78 CYS CA C sing N N 79 CYS CA CB sing N N 80 CYS CA HA sing N N 81 CYS C O doub N N 82 CYS C OXT sing N N 83 CYS CB SG sing N N 84 CYS CB HB2 sing N N 85 CYS CB HB3 sing N N 86 CYS SG HG sing N N 87 CYS OXT HXT sing N N 88 DA OP3 P sing N N 89 DA OP3 HOP3 sing N N 90 DA P OP1 doub N N 91 DA P OP2 sing N N 92 DA P "O5'" sing N N 93 DA OP2 HOP2 sing N N 94 DA "O5'" "C5'" sing N N 95 DA "C5'" "C4'" sing N N 96 DA "C5'" "H5'" sing N N 97 DA "C5'" "H5''" sing N N 98 DA "C4'" "O4'" sing N N 99 DA "C4'" "C3'" sing N N 100 DA "C4'" "H4'" sing N N 101 DA "O4'" "C1'" sing N N 102 DA "C3'" "O3'" sing N N 103 DA "C3'" "C2'" sing N N 104 DA "C3'" "H3'" sing N N 105 DA "O3'" "HO3'" sing N N 106 DA "C2'" "C1'" sing N N 107 DA "C2'" "H2'" sing N N 108 DA "C2'" "H2''" sing N N 109 DA "C1'" N9 sing N N 110 DA "C1'" "H1'" sing N N 111 DA N9 C8 sing Y N 112 DA N9 C4 sing Y N 113 DA C8 N7 doub Y N 114 DA C8 H8 sing N N 115 DA N7 C5 sing Y N 116 DA C5 C6 sing Y N 117 DA C5 C4 doub Y N 118 DA C6 N6 sing N N 119 DA C6 N1 doub Y N 120 DA N6 H61 sing N N 121 DA N6 H62 sing N N 122 DA N1 C2 sing Y N 123 DA C2 N3 doub Y N 124 DA C2 H2 sing N N 125 DA N3 C4 sing Y N 126 DC OP3 P sing N N 127 DC OP3 HOP3 sing N N 128 DC P OP1 doub N N 129 DC P OP2 sing N N 130 DC P "O5'" sing N N 131 DC OP2 HOP2 sing N N 132 DC "O5'" "C5'" sing N N 133 DC "C5'" "C4'" sing N N 134 DC "C5'" "H5'" sing N N 135 DC "C5'" "H5''" sing N N 136 DC "C4'" "O4'" sing N N 137 DC "C4'" "C3'" sing N N 138 DC "C4'" "H4'" sing N N 139 DC "O4'" "C1'" sing N N 140 DC "C3'" "O3'" sing N N 141 DC "C3'" "C2'" sing N N 142 DC "C3'" "H3'" sing N N 143 DC "O3'" "HO3'" sing N N 144 DC "C2'" "C1'" sing N N 145 DC "C2'" "H2'" sing N N 146 DC "C2'" "H2''" sing N N 147 DC "C1'" N1 sing N N 148 DC "C1'" "H1'" sing N N 149 DC N1 C2 sing N N 150 DC N1 C6 sing N N 151 DC C2 O2 doub N N 152 DC C2 N3 sing N N 153 DC N3 C4 doub N N 154 DC C4 N4 sing N N 155 DC C4 C5 sing N N 156 DC N4 H41 sing N N 157 DC N4 H42 sing N N 158 DC C5 C6 doub N N 159 DC C5 H5 sing N N 160 DC C6 H6 sing N N 161 DG OP3 P sing N N 162 DG OP3 HOP3 sing N N 163 DG P OP1 doub N N 164 DG P OP2 sing N N 165 DG P "O5'" sing N N 166 DG OP2 HOP2 sing N N 167 DG "O5'" "C5'" sing N N 168 DG "C5'" "C4'" sing N N 169 DG "C5'" "H5'" sing N N 170 DG "C5'" "H5''" sing N N 171 DG "C4'" "O4'" sing N N 172 DG "C4'" "C3'" sing N N 173 DG "C4'" "H4'" sing N N 174 DG "O4'" "C1'" sing N N 175 DG "C3'" "O3'" sing N N 176 DG "C3'" "C2'" sing N N 177 DG "C3'" "H3'" sing N N 178 DG "O3'" "HO3'" sing N N 179 DG "C2'" "C1'" sing N N 180 DG "C2'" "H2'" sing N N 181 DG "C2'" "H2''" sing N N 182 DG "C1'" N9 sing N N 183 DG "C1'" "H1'" sing N N 184 DG N9 C8 sing Y N 185 DG N9 C4 sing Y N 186 DG C8 N7 doub Y N 187 DG C8 H8 sing N N 188 DG N7 C5 sing Y N 189 DG C5 C6 sing N N 190 DG C5 C4 doub Y N 191 DG C6 O6 doub N N 192 DG C6 N1 sing N N 193 DG N1 C2 sing N N 194 DG N1 H1 sing N N 195 DG C2 N2 sing N N 196 DG C2 N3 doub N N 197 DG N2 H21 sing N N 198 DG N2 H22 sing N N 199 DG N3 C4 sing N N 200 DT OP3 P sing N N 201 DT OP3 HOP3 sing N N 202 DT P OP1 doub N N 203 DT P OP2 sing N N 204 DT P "O5'" sing N N 205 DT OP2 HOP2 sing N N 206 DT "O5'" "C5'" sing N N 207 DT "C5'" "C4'" sing N N 208 DT "C5'" "H5'" sing N N 209 DT "C5'" "H5''" sing N N 210 DT "C4'" "O4'" sing N N 211 DT "C4'" "C3'" sing N N 212 DT "C4'" "H4'" sing N N 213 DT "O4'" "C1'" sing N N 214 DT "C3'" "O3'" sing N N 215 DT "C3'" "C2'" sing N N 216 DT "C3'" "H3'" sing N N 217 DT "O3'" "HO3'" sing N N 218 DT "C2'" "C1'" sing N N 219 DT "C2'" "H2'" sing N N 220 DT "C2'" "H2''" sing N N 221 DT "C1'" N1 sing N N 222 DT "C1'" "H1'" sing N N 223 DT N1 C2 sing N N 224 DT N1 C6 sing N N 225 DT C2 O2 doub N N 226 DT C2 N3 sing N N 227 DT N3 C4 sing N N 228 DT N3 H3 sing N N 229 DT C4 O4 doub N N 230 DT C4 C5 sing N N 231 DT C5 C7 sing N N 232 DT C5 C6 doub N N 233 DT C7 H71 sing N N 234 DT C7 H72 sing N N 235 DT C7 H73 sing N N 236 DT C6 H6 sing N N 237 GLN N CA sing N N 238 GLN N H sing N N 239 GLN N H2 sing N N 240 GLN CA C sing N N 241 GLN CA CB sing N N 242 GLN CA HA sing N N 243 GLN C O doub N N 244 GLN C OXT sing N N 245 GLN CB CG sing N N 246 GLN CB HB2 sing N N 247 GLN CB HB3 sing N N 248 GLN CG CD sing N N 249 GLN CG HG2 sing N N 250 GLN CG HG3 sing N N 251 GLN CD OE1 doub N N 252 GLN CD NE2 sing N N 253 GLN NE2 HE21 sing N N 254 GLN NE2 HE22 sing N N 255 GLN OXT HXT sing N N 256 GLU N CA sing N N 257 GLU N H sing N N 258 GLU N H2 sing N N 259 GLU CA C sing N N 260 GLU CA CB sing N N 261 GLU CA HA sing N N 262 GLU C O doub N N 263 GLU C OXT sing N N 264 GLU CB CG sing N N 265 GLU CB HB2 sing N N 266 GLU CB HB3 sing N N 267 GLU CG CD sing N N 268 GLU CG HG2 sing N N 269 GLU CG HG3 sing N N 270 GLU CD OE1 doub N N 271 GLU CD OE2 sing N N 272 GLU OE2 HE2 sing N N 273 GLU OXT HXT sing N N 274 GLY N CA sing N N 275 GLY N H sing N N 276 GLY N H2 sing N N 277 GLY CA C sing N N 278 GLY CA HA2 sing N N 279 GLY CA HA3 sing N N 280 GLY C O doub N N 281 GLY C OXT sing N N 282 GLY OXT HXT sing N N 283 HIS N CA sing N N 284 HIS N H sing N N 285 HIS N H2 sing N N 286 HIS CA C sing N N 287 HIS CA CB sing N N 288 HIS CA HA sing N N 289 HIS C O doub N N 290 HIS C OXT sing N N 291 HIS CB CG sing N N 292 HIS CB HB2 sing N N 293 HIS CB HB3 sing N N 294 HIS CG ND1 sing Y N 295 HIS CG CD2 doub Y N 296 HIS ND1 CE1 doub Y N 297 HIS ND1 HD1 sing N N 298 HIS CD2 NE2 sing Y N 299 HIS CD2 HD2 sing N N 300 HIS CE1 NE2 sing Y N 301 HIS CE1 HE1 sing N N 302 HIS NE2 HE2 sing N N 303 HIS OXT HXT sing N N 304 HOH O H1 sing N N 305 HOH O H2 sing N N 306 ILE N CA sing N N 307 ILE N H sing N N 308 ILE N H2 sing N N 309 ILE CA C sing N N 310 ILE CA CB sing N N 311 ILE CA HA sing N N 312 ILE C O doub N N 313 ILE C OXT sing N N 314 ILE CB CG1 sing N N 315 ILE CB CG2 sing N N 316 ILE CB HB sing N N 317 ILE CG1 CD1 sing N N 318 ILE CG1 HG12 sing N N 319 ILE CG1 HG13 sing N N 320 ILE CG2 HG21 sing N N 321 ILE CG2 HG22 sing N N 322 ILE CG2 HG23 sing N N 323 ILE CD1 HD11 sing N N 324 ILE CD1 HD12 sing N N 325 ILE CD1 HD13 sing N N 326 ILE OXT HXT sing N N 327 LEU N CA sing N N 328 LEU N H sing N N 329 LEU N H2 sing N N 330 LEU CA C sing N N 331 LEU CA CB sing N N 332 LEU CA HA sing N N 333 LEU C O doub N N 334 LEU C OXT sing N N 335 LEU CB CG sing N N 336 LEU CB HB2 sing N N 337 LEU CB HB3 sing N N 338 LEU CG CD1 sing N N 339 LEU CG CD2 sing N N 340 LEU CG HG sing N N 341 LEU CD1 HD11 sing N N 342 LEU CD1 HD12 sing N N 343 LEU CD1 HD13 sing N N 344 LEU CD2 HD21 sing N N 345 LEU CD2 HD22 sing N N 346 LEU CD2 HD23 sing N N 347 LEU OXT HXT sing N N 348 LYS N CA sing N N 349 LYS N H sing N N 350 LYS N H2 sing N N 351 LYS CA C sing N N 352 LYS CA CB sing N N 353 LYS CA HA sing N N 354 LYS C O doub N N 355 LYS C OXT sing N N 356 LYS CB CG sing N N 357 LYS CB HB2 sing N N 358 LYS CB HB3 sing N N 359 LYS CG CD sing N N 360 LYS CG HG2 sing N N 361 LYS CG HG3 sing N N 362 LYS CD CE sing N N 363 LYS CD HD2 sing N N 364 LYS CD HD3 sing N N 365 LYS CE NZ sing N N 366 LYS CE HE2 sing N N 367 LYS CE HE3 sing N N 368 LYS NZ HZ1 sing N N 369 LYS NZ HZ2 sing N N 370 LYS NZ HZ3 sing N N 371 LYS OXT HXT sing N N 372 MET N CA sing N N 373 MET N H sing N N 374 MET N H2 sing N N 375 MET CA C sing N N 376 MET CA CB sing N N 377 MET CA HA sing N N 378 MET C O doub N N 379 MET C OXT sing N N 380 MET CB CG sing N N 381 MET CB HB2 sing N N 382 MET CB HB3 sing N N 383 MET CG SD sing N N 384 MET CG HG2 sing N N 385 MET CG HG3 sing N N 386 MET SD CE sing N N 387 MET CE HE1 sing N N 388 MET CE HE2 sing N N 389 MET CE HE3 sing N N 390 MET OXT HXT sing N N 391 PHE N CA sing N N 392 PHE N H sing N N 393 PHE N H2 sing N N 394 PHE CA C sing N N 395 PHE CA CB sing N N 396 PHE CA HA sing N N 397 PHE C O doub N N 398 PHE C OXT sing N N 399 PHE CB CG sing N N 400 PHE CB HB2 sing N N 401 PHE CB HB3 sing N N 402 PHE CG CD1 doub Y N 403 PHE CG CD2 sing Y N 404 PHE CD1 CE1 sing Y N 405 PHE CD1 HD1 sing N N 406 PHE CD2 CE2 doub Y N 407 PHE CD2 HD2 sing N N 408 PHE CE1 CZ doub Y N 409 PHE CE1 HE1 sing N N 410 PHE CE2 CZ sing Y N 411 PHE CE2 HE2 sing N N 412 PHE CZ HZ sing N N 413 PHE OXT HXT sing N N 414 PRO N CA sing N N 415 PRO N CD sing N N 416 PRO N H sing N N 417 PRO CA C sing N N 418 PRO CA CB sing N N 419 PRO CA HA sing N N 420 PRO C O doub N N 421 PRO C OXT sing N N 422 PRO CB CG sing N N 423 PRO CB HB2 sing N N 424 PRO CB HB3 sing N N 425 PRO CG CD sing N N 426 PRO CG HG2 sing N N 427 PRO CG HG3 sing N N 428 PRO CD HD2 sing N N 429 PRO CD HD3 sing N N 430 PRO OXT HXT sing N N 431 SER N CA sing N N 432 SER N H sing N N 433 SER N H2 sing N N 434 SER CA C sing N N 435 SER CA CB sing N N 436 SER CA HA sing N N 437 SER C O doub N N 438 SER C OXT sing N N 439 SER CB OG sing N N 440 SER CB HB2 sing N N 441 SER CB HB3 sing N N 442 SER OG HG sing N N 443 SER OXT HXT sing N N 444 THR N CA sing N N 445 THR N H sing N N 446 THR N H2 sing N N 447 THR CA C sing N N 448 THR CA CB sing N N 449 THR CA HA sing N N 450 THR C O doub N N 451 THR C OXT sing N N 452 THR CB OG1 sing N N 453 THR CB CG2 sing N N 454 THR CB HB sing N N 455 THR OG1 HG1 sing N N 456 THR CG2 HG21 sing N N 457 THR CG2 HG22 sing N N 458 THR CG2 HG23 sing N N 459 THR OXT HXT sing N N 460 TRP N CA sing N N 461 TRP N H sing N N 462 TRP N H2 sing N N 463 TRP CA C sing N N 464 TRP CA CB sing N N 465 TRP CA HA sing N N 466 TRP C O doub N N 467 TRP C OXT sing N N 468 TRP CB CG sing N N 469 TRP CB HB2 sing N N 470 TRP CB HB3 sing N N 471 TRP CG CD1 doub Y N 472 TRP CG CD2 sing Y N 473 TRP CD1 NE1 sing Y N 474 TRP CD1 HD1 sing N N 475 TRP CD2 CE2 doub Y N 476 TRP CD2 CE3 sing Y N 477 TRP NE1 CE2 sing Y N 478 TRP NE1 HE1 sing N N 479 TRP CE2 CZ2 sing Y N 480 TRP CE3 CZ3 doub Y N 481 TRP CE3 HE3 sing N N 482 TRP CZ2 CH2 doub Y N 483 TRP CZ2 HZ2 sing N N 484 TRP CZ3 CH2 sing Y N 485 TRP CZ3 HZ3 sing N N 486 TRP CH2 HH2 sing N N 487 TRP OXT HXT sing N N 488 TYR N CA sing N N 489 TYR N H sing N N 490 TYR N H2 sing N N 491 TYR CA C sing N N 492 TYR CA CB sing N N 493 TYR CA HA sing N N 494 TYR C O doub N N 495 TYR C OXT sing N N 496 TYR CB CG sing N N 497 TYR CB HB2 sing N N 498 TYR CB HB3 sing N N 499 TYR CG CD1 doub Y N 500 TYR CG CD2 sing Y N 501 TYR CD1 CE1 sing Y N 502 TYR CD1 HD1 sing N N 503 TYR CD2 CE2 doub Y N 504 TYR CD2 HD2 sing N N 505 TYR CE1 CZ doub Y N 506 TYR CE1 HE1 sing N N 507 TYR CE2 CZ sing Y N 508 TYR CE2 HE2 sing N N 509 TYR CZ OH sing N N 510 TYR OH HH sing N N 511 TYR OXT HXT sing N N 512 VAL N CA sing N N 513 VAL N H sing N N 514 VAL N H2 sing N N 515 VAL CA C sing N N 516 VAL CA CB sing N N 517 VAL CA HA sing N N 518 VAL C O doub N N 519 VAL C OXT sing N N 520 VAL CB CG1 sing N N 521 VAL CB CG2 sing N N 522 VAL CB HB sing N N 523 VAL CG1 HG11 sing N N 524 VAL CG1 HG12 sing N N 525 VAL CG1 HG13 sing N N 526 VAL CG2 HG21 sing N N 527 VAL CG2 HG22 sing N N 528 VAL CG2 HG23 sing N N 529 VAL OXT HXT sing N N 530 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4LVJ 'double helix' 4LVJ 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 7 1_555 0.245 0.103 -0.084 -2.134 1.229 0.856 1 B_DA1:DT18_C B 1 ? C 18 ? 20 1 1 B DC 2 1_555 C DG 6 1_555 0.451 -0.177 0.146 9.135 -22.647 2.376 2 B_DC2:DG17_C B 2 ? C 17 ? 19 1 1 B DT 3 1_555 C DA 5 1_555 -0.297 0.042 0.270 -18.640 -13.569 -1.023 3 B_DT3:DA16_C B 3 ? C 16 ? 20 1 1 B DT 4 1_555 C DA 4 1_555 -0.028 -0.071 -0.179 -6.903 -18.178 -0.359 4 B_DT4:DA15_C B 4 ? C 15 ? 20 1 1 B DT 5 1_555 C DA 3 1_555 0.211 -0.265 -0.224 -13.408 -11.202 2.078 5 B_DT5:DA14_C B 5 ? C 14 ? 20 1 1 B DA 6 1_555 C DT 2 1_555 0.108 0.121 -0.112 -0.772 -8.051 0.552 6 B_DA6:DT13_C B 6 ? C 13 ? 20 1 1 B DT 7 1_555 C DA 1 1_555 0.394 0.035 0.291 -3.059 -9.229 -0.518 7 B_DT7:DA12_C B 7 ? C 12 ? 20 1 1 C DT 12 1_555 C DG 15 1_555 2.435 -0.466 -0.278 -2.691 -3.758 1.766 8 C_DT23:DG26_C C 23 ? C 26 ? 28 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 7 1_555 B DC 2 1_555 C DG 6 1_555 -0.624 -0.527 3.120 -4.853 -1.444 32.643 -0.689 0.300 3.197 -2.549 8.569 33.023 1 BB_DA1DC2:DG17DT18_CC B 1 ? C 18 ? B 2 ? C 17 ? 1 B DC 2 1_555 C DG 6 1_555 B DT 3 1_555 C DA 5 1_555 0.162 -0.796 3.770 3.906 4.576 38.737 -1.813 0.291 3.654 6.849 -5.845 39.184 2 BB_DC2DT3:DA16DG17_CC B 2 ? C 17 ? B 3 ? C 16 ? 1 B DT 3 1_555 C DA 5 1_555 B DT 4 1_555 C DA 4 1_555 -0.649 -0.146 2.900 2.096 -4.357 36.490 0.293 1.280 2.857 -6.921 -3.329 36.798 3 BB_DT3DT4:DA15DA16_CC B 3 ? C 16 ? B 4 ? C 15 ? 1 B DT 4 1_555 C DA 4 1_555 B DT 5 1_555 C DA 3 1_555 0.543 0.317 3.392 1.932 0.682 39.308 0.386 -0.568 3.419 1.013 -2.870 39.359 4 BB_DT4DT5:DA14DA15_CC B 4 ? C 15 ? B 5 ? C 14 ? 1 B DT 5 1_555 C DA 3 1_555 B DA 6 1_555 C DT 2 1_555 0.026 1.158 3.198 -0.939 10.164 29.691 0.157 -0.231 3.398 19.137 1.767 31.359 5 BB_DT5DA6:DT13DA14_CC B 5 ? C 14 ? B 6 ? C 13 ? 1 B DA 6 1_555 C DT 2 1_555 B DT 7 1_555 C DA 1 1_555 0.511 -0.578 3.384 -3.035 -2.382 30.068 -0.609 -1.610 3.352 -4.567 5.820 30.309 6 BB_DA6DT7:DA12DT13_CC B 6 ? C 13 ? B 7 ? C 12 ? # _atom_sites.entry_id 4LVJ _atom_sites.fract_transf_matrix[1][1] 0.008927 _atom_sites.fract_transf_matrix[1][2] 0.005154 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010308 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011036 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MN N O P S # loop_