data_4LVL # _entry.id 4LVL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LVL pdb_00004lvl 10.2210/pdb4lvl/pdb NDB NA2680 ? ? RCSB RCSB081140 ? ? WWPDB D_1000081140 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-24 2 'Structure model' 1 1 2017-10-18 3 'Structure model' 2 0 2022-04-20 4 'Structure model' 2 1 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' Advisory 3 3 'Structure model' 'Atomic model' 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Source and taxonomy' 8 3 'Structure model' 'Structure summary' 9 4 'Structure model' 'Data collection' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' citation 2 2 'Structure model' citation_author 3 3 'Structure model' atom_site 4 3 'Structure model' atom_site_anisotrop 5 3 'Structure model' database_2 6 3 'Structure model' entity 7 3 'Structure model' entity_src_gen 8 3 'Structure model' ndb_struct_na_base_pair 9 3 'Structure model' ndb_struct_na_base_pair_step 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_entity_src_syn 12 3 'Structure model' pdbx_nonpoly_scheme 13 3 'Structure model' pdbx_poly_seq_scheme 14 3 'Structure model' pdbx_struct_assembly 15 3 'Structure model' pdbx_struct_assembly_gen 16 3 'Structure model' pdbx_struct_assembly_prop 17 3 'Structure model' pdbx_struct_conn_angle 18 3 'Structure model' pdbx_unobs_or_zero_occ_residues 19 3 'Structure model' struct_asym 20 3 'Structure model' struct_conn 21 3 'Structure model' struct_conn_type 22 3 'Structure model' struct_ref 23 3 'Structure model' struct_site 24 3 'Structure model' struct_site_gen 25 4 'Structure model' chem_comp_atom 26 4 'Structure model' chem_comp_bond # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_citation.country' 2 2 'Structure model' '_citation.journal_abbrev' 3 2 'Structure model' '_citation.journal_id_ASTM' 4 2 'Structure model' '_citation.journal_id_CSD' 5 2 'Structure model' '_citation.journal_id_ISSN' 6 2 'Structure model' '_citation.journal_volume' 7 2 'Structure model' '_citation.page_first' 8 2 'Structure model' '_citation.page_last' 9 2 'Structure model' '_citation.pdbx_database_id_DOI' 10 2 'Structure model' '_citation.pdbx_database_id_PubMed' 11 2 'Structure model' '_citation.title' 12 2 'Structure model' '_citation.year' 13 3 'Structure model' '_atom_site.B_iso_or_equiv' 14 3 'Structure model' '_atom_site.Cartn_x' 15 3 'Structure model' '_atom_site.Cartn_y' 16 3 'Structure model' '_atom_site.Cartn_z' 17 3 'Structure model' '_atom_site.auth_asym_id' 18 3 'Structure model' '_atom_site.auth_atom_id' 19 3 'Structure model' '_atom_site.auth_comp_id' 20 3 'Structure model' '_atom_site.auth_seq_id' 21 3 'Structure model' '_atom_site.label_asym_id' 22 3 'Structure model' '_atom_site.label_atom_id' 23 3 'Structure model' '_atom_site.label_comp_id' 24 3 'Structure model' '_atom_site.label_entity_id' 25 3 'Structure model' '_atom_site.label_seq_id' 26 3 'Structure model' '_atom_site.type_symbol' 27 3 'Structure model' '_atom_site_anisotrop.id' 28 3 'Structure model' '_atom_site_anisotrop.pdbx_auth_seq_id' 29 3 'Structure model' '_atom_site_anisotrop.pdbx_label_asym_id' 30 3 'Structure model' '_atom_site_anisotrop.pdbx_label_seq_id' 31 3 'Structure model' '_database_2.pdbx_DOI' 32 3 'Structure model' '_database_2.pdbx_database_accession' 33 3 'Structure model' '_entity_src_gen.pdbx_beg_seq_num' 34 3 'Structure model' '_entity_src_gen.pdbx_end_seq_num' 35 3 'Structure model' '_entity_src_gen.pdbx_seq_type' 36 3 'Structure model' '_ndb_struct_na_base_pair.buckle' 37 3 'Structure model' '_ndb_struct_na_base_pair.opening' 38 3 'Structure model' '_ndb_struct_na_base_pair.propeller' 39 3 'Structure model' '_ndb_struct_na_base_pair.shear' 40 3 'Structure model' '_ndb_struct_na_base_pair.stagger' 41 3 'Structure model' '_ndb_struct_na_base_pair.stretch' 42 3 'Structure model' '_ndb_struct_na_base_pair_step.helical_rise' 43 3 'Structure model' '_ndb_struct_na_base_pair_step.helical_twist' 44 3 'Structure model' '_ndb_struct_na_base_pair_step.inclination' 45 3 'Structure model' '_ndb_struct_na_base_pair_step.rise' 46 3 'Structure model' '_ndb_struct_na_base_pair_step.roll' 47 3 'Structure model' '_ndb_struct_na_base_pair_step.shift' 48 3 'Structure model' '_ndb_struct_na_base_pair_step.slide' 49 3 'Structure model' '_ndb_struct_na_base_pair_step.tilt' 50 3 'Structure model' '_ndb_struct_na_base_pair_step.tip' 51 3 'Structure model' '_ndb_struct_na_base_pair_step.twist' 52 3 'Structure model' '_ndb_struct_na_base_pair_step.x_displacement' 53 3 'Structure model' '_ndb_struct_na_base_pair_step.y_displacement' 54 3 'Structure model' '_pdbx_entity_src_syn.ncbi_taxonomy_id' 55 3 'Structure model' '_pdbx_entity_src_syn.organism_scientific' 56 3 'Structure model' '_pdbx_entity_src_syn.pdbx_beg_seq_num' 57 3 'Structure model' '_pdbx_entity_src_syn.pdbx_end_seq_num' 58 3 'Structure model' '_pdbx_poly_seq_scheme.auth_mon_id' 59 3 'Structure model' '_pdbx_poly_seq_scheme.auth_seq_num' 60 3 'Structure model' '_pdbx_poly_seq_scheme.pdb_mon_id' 61 3 'Structure model' '_pdbx_struct_assembly_prop.biol_id' 62 3 'Structure model' '_pdbx_struct_assembly_prop.value' 63 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 64 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 65 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 66 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 67 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 68 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 69 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 70 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 71 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 72 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 73 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 74 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 75 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 76 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 77 3 'Structure model' '_pdbx_struct_conn_angle.value' 78 3 'Structure model' '_struct_conn.conn_type_id' 79 3 'Structure model' '_struct_conn.id' 80 3 'Structure model' '_struct_conn.pdbx_dist_value' 81 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 82 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 83 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 84 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 85 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 86 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 87 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 88 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 89 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 90 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 91 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 92 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 93 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 94 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 95 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 96 3 'Structure model' '_struct_conn_type.id' 97 3 'Structure model' '_struct_ref.pdbx_align_begin' 98 3 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 99 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 100 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 101 3 'Structure model' '_struct_site.pdbx_auth_seq_id' 102 3 'Structure model' '_struct_site_gen.auth_seq_id' 103 3 'Structure model' '_struct_site_gen.label_asym_id' 104 3 'Structure model' '_struct_site_gen.label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4LVL _pdbx_database_status.recvd_initial_deposition_date 2013-07-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pluta, R.' 1 'Boer, D.R.' 2 'Coll, M.' 3 # _citation.id primary _citation.title 'Structural basis of a histidine-DNA nicking/joining mechanism for gene transfer and promiscuous spread of antibiotic resistance.' _citation.journal_abbrev 'Proc. Natl. Acad. Sci. U.S.A.' _citation.journal_volume 114 _citation.page_first E6526 _citation.page_last E6535 _citation.year 2017 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 1091-6490 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 28739894 _citation.pdbx_database_id_DOI 10.1073/pnas.1702971114 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Pluta, R.' 1 ? primary 'Boer, D.R.' 2 ? primary 'Lorenzo-Diaz, F.' 3 ? primary 'Russi, S.' 4 ? primary 'Gomez, H.' 5 ? primary 'Fernandez-Lopez, C.' 6 ? primary 'Perez-Luque, R.' 7 ? primary 'Orozco, M.' 8 ? primary 'Espinosa, M.' 9 ? primary 'Coll, M.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Plasmid recombination enzyme' 23168.918 1 ? ? 'Relaxase Domain of MobM protein, UNP residues 2-199' ? 2 polymer syn ;DNA (5'-D(*AP*CP*TP*TP*TP*AP*T)-3') ; 2087.409 1 ? ? 'oligonucleotide_1 mimicking pMV158 oriT DNA hairpin' ? 3 polymer syn ;DNA (5'-D(*AP*TP*AP*AP*AP*GP*TP*AP*TP*AP*GP*TP*GP*TP*GP*(TS6))-3') ; 4768.116 1 ? ? 'oligonucleotide_2 mimicking pMV158 oriT DNA hairpin' ? 4 non-polymer syn 'MANGANESE (II) ION' 54.938 1 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 3 ? ? ? ? 6 water nat water 18.015 157 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Mobilization protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; A ? 2 polydeoxyribonucleotide no no '(DA)(DC)(DT)(DT)(DT)(DA)(DT)' ACTTTAT B ? 3 polydeoxyribonucleotide no yes '(DA)(DT)(DA)(DA)(DA)(DG)(DT)(DA)(DT)(DA)(DG)(DT)(DG)(DT)(DG)(TS6)' ATAAAGTATAGTGTGX C ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 'MANGANESE (II) ION' MN 5 'CHLORIDE ION' CL 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 TYR n 1 3 MET n 1 4 VAL n 1 5 ALA n 1 6 ARG n 1 7 MET n 1 8 GLN n 1 9 LYS n 1 10 MET n 1 11 LYS n 1 12 ALA n 1 13 GLY n 1 14 ASN n 1 15 LEU n 1 16 GLY n 1 17 GLY n 1 18 ALA n 1 19 PHE n 1 20 LYS n 1 21 HIS n 1 22 ASN n 1 23 GLU n 1 24 ARG n 1 25 VAL n 1 26 PHE n 1 27 GLU n 1 28 THR n 1 29 HIS n 1 30 SER n 1 31 ASN n 1 32 LYS n 1 33 ASP n 1 34 ILE n 1 35 ASN n 1 36 PRO n 1 37 SER n 1 38 ARG n 1 39 SER n 1 40 HIS n 1 41 LEU n 1 42 ASN n 1 43 TYR n 1 44 GLU n 1 45 LEU n 1 46 THR n 1 47 ASP n 1 48 ARG n 1 49 ASP n 1 50 ARG n 1 51 SER n 1 52 VAL n 1 53 SER n 1 54 TYR n 1 55 GLU n 1 56 LYS n 1 57 GLN n 1 58 ILE n 1 59 LYS n 1 60 ASP n 1 61 TYR n 1 62 VAL n 1 63 ASN n 1 64 GLU n 1 65 ASN n 1 66 LYS n 1 67 VAL n 1 68 SER n 1 69 ASN n 1 70 ARG n 1 71 ALA n 1 72 ILE n 1 73 ARG n 1 74 LYS n 1 75 ASP n 1 76 ALA n 1 77 VAL n 1 78 LEU n 1 79 CYS n 1 80 ASP n 1 81 GLU n 1 82 TRP n 1 83 ILE n 1 84 ILE n 1 85 THR n 1 86 SER n 1 87 ASP n 1 88 LYS n 1 89 ASP n 1 90 PHE n 1 91 PHE n 1 92 GLU n 1 93 LYS n 1 94 LEU n 1 95 ASP n 1 96 GLU n 1 97 GLU n 1 98 GLN n 1 99 THR n 1 100 ARG n 1 101 THR n 1 102 PHE n 1 103 PHE n 1 104 GLU n 1 105 THR n 1 106 ALA n 1 107 LYS n 1 108 ASN n 1 109 TYR n 1 110 PHE n 1 111 ALA n 1 112 GLU n 1 113 ASN n 1 114 TYR n 1 115 GLY n 1 116 GLU n 1 117 SER n 1 118 ASN n 1 119 ILE n 1 120 ALA n 1 121 TYR n 1 122 ALA n 1 123 SER n 1 124 VAL n 1 125 HIS n 1 126 LEU n 1 127 ASP n 1 128 GLU n 1 129 SER n 1 130 THR n 1 131 PRO n 1 132 HIS n 1 133 MET n 1 134 HIS n 1 135 MET n 1 136 GLY n 1 137 VAL n 1 138 VAL n 1 139 PRO n 1 140 PHE n 1 141 GLU n 1 142 ASN n 1 143 GLY n 1 144 LYS n 1 145 LEU n 1 146 SER n 1 147 SER n 1 148 LYS n 1 149 ALA n 1 150 MET n 1 151 PHE n 1 152 ASP n 1 153 ARG n 1 154 GLU n 1 155 GLU n 1 156 LEU n 1 157 LYS n 1 158 HIS n 1 159 ILE n 1 160 GLN n 1 161 GLU n 1 162 ASP n 1 163 LEU n 1 164 PRO n 1 165 ARG n 1 166 TYR n 1 167 MET n 1 168 SER n 1 169 ASP n 1 170 HIS n 1 171 GLY n 1 172 PHE n 1 173 GLU n 1 174 LEU n 1 175 GLU n 1 176 ARG n 1 177 GLY n 1 178 LYS n 1 179 LEU n 1 180 ASN n 1 181 SER n 1 182 GLU n 1 183 ALA n 1 184 LYS n 1 185 HIS n 1 186 LYS n 1 187 THR n 1 188 VAL n 1 189 ALA n 1 190 GLU n 1 191 PHE n 1 192 LYS n 1 193 ARG n 1 194 ALA n 1 195 MET n 1 196 ALA n 1 197 ASP n 1 198 MET n 2 1 DA n 2 2 DC n 2 3 DT n 2 4 DT n 2 5 DT n 2 6 DA n 2 7 DT n 3 1 DA n 3 2 DT n 3 3 DA n 3 4 DA n 3 5 DA n 3 6 DG n 3 7 DT n 3 8 DA n 3 9 DT n 3 10 DA n 3 11 DG n 3 12 DT n 3 13 DG n 3 14 DT n 3 15 DG n 3 16 TS6 n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 198 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'pre, mob' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus agalactiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1311 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pQE-1 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 7 'Synthetic DNA' ? 32630 'Oligonucleotides were obtained from Biomers (Ulm, Germany).' 3 1 sample 1 16 'Synthetic DNA' ? 32630 'Oligonucleotides were obtained from Biomers (Ulm, Germany).' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MN non-polymer . 'MANGANESE (II) ION' ? 'Mn 2' 54.938 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TS6 non-polymer . Monothiophosphate 'phosphorothioic O,O,S-acid' 'H3 O3 P S' 114.061 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 2 2 SER SER A . n A 1 2 TYR 2 3 3 TYR TYR A . n A 1 3 MET 3 4 4 MET MET A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 ALA 5 6 6 ALA ALA A . n A 1 6 ARG 6 7 7 ARG ARG A . n A 1 7 MET 7 8 8 MET MET A . n A 1 8 GLN 8 9 9 GLN GLN A . n A 1 9 LYS 9 10 10 LYS LYS A . n A 1 10 MET 10 11 11 MET MET A . n A 1 11 LYS 11 12 12 LYS LYS A . n A 1 12 ALA 12 13 13 ALA ALA A . n A 1 13 GLY 13 14 14 GLY GLY A . n A 1 14 ASN 14 15 15 ASN ASN A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 GLY 16 17 17 GLY GLY A . n A 1 17 GLY 17 18 18 GLY GLY A . n A 1 18 ALA 18 19 19 ALA ALA A . n A 1 19 PHE 19 20 20 PHE PHE A . n A 1 20 LYS 20 21 21 LYS LYS A . n A 1 21 HIS 21 22 22 HIS HIS A . n A 1 22 ASN 22 23 23 ASN ASN A . n A 1 23 GLU 23 24 24 GLU GLU A . n A 1 24 ARG 24 25 25 ARG ARG A . n A 1 25 VAL 25 26 26 VAL VAL A . n A 1 26 PHE 26 27 27 PHE PHE A . n A 1 27 GLU 27 28 28 GLU GLU A . n A 1 28 THR 28 29 29 THR THR A . n A 1 29 HIS 29 30 30 HIS HIS A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 ASN 31 32 32 ASN ASN A . n A 1 32 LYS 32 33 33 LYS LYS A . n A 1 33 ASP 33 34 34 ASP ASP A . n A 1 34 ILE 34 35 35 ILE ILE A . n A 1 35 ASN 35 36 36 ASN ASN A . n A 1 36 PRO 36 37 37 PRO PRO A . n A 1 37 SER 37 38 38 SER SER A . n A 1 38 ARG 38 39 39 ARG ARG A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 HIS 40 41 41 HIS HIS A . n A 1 41 LEU 41 42 42 LEU LEU A . n A 1 42 ASN 42 43 43 ASN ASN A . n A 1 43 TYR 43 44 44 TYR TYR A . n A 1 44 GLU 44 45 45 GLU GLU A . n A 1 45 LEU 45 46 46 LEU LEU A . n A 1 46 THR 46 47 47 THR THR A . n A 1 47 ASP 47 48 48 ASP ASP A . n A 1 48 ARG 48 49 49 ARG ARG A . n A 1 49 ASP 49 50 50 ASP ASP A . n A 1 50 ARG 50 51 51 ARG ARG A . n A 1 51 SER 51 52 52 SER SER A . n A 1 52 VAL 52 53 53 VAL VAL A . n A 1 53 SER 53 54 54 SER SER A . n A 1 54 TYR 54 55 55 TYR TYR A . n A 1 55 GLU 55 56 56 GLU GLU A . n A 1 56 LYS 56 57 57 LYS LYS A . n A 1 57 GLN 57 58 58 GLN GLN A . n A 1 58 ILE 58 59 59 ILE ILE A . n A 1 59 LYS 59 60 60 LYS LYS A . n A 1 60 ASP 60 61 61 ASP ASP A . n A 1 61 TYR 61 62 62 TYR TYR A . n A 1 62 VAL 62 63 63 VAL VAL A . n A 1 63 ASN 63 64 64 ASN ASN A . n A 1 64 GLU 64 65 65 GLU GLU A . n A 1 65 ASN 65 66 66 ASN ASN A . n A 1 66 LYS 66 67 67 LYS LYS A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 SER 68 69 69 SER SER A . n A 1 69 ASN 69 70 70 ASN ASN A . n A 1 70 ARG 70 71 71 ARG ARG A . n A 1 71 ALA 71 72 72 ALA ALA A . n A 1 72 ILE 72 73 73 ILE ILE A . n A 1 73 ARG 73 74 74 ARG ARG A . n A 1 74 LYS 74 75 75 LYS LYS A . n A 1 75 ASP 75 76 76 ASP ASP A . n A 1 76 ALA 76 77 77 ALA ALA A . n A 1 77 VAL 77 78 78 VAL VAL A . n A 1 78 LEU 78 79 79 LEU LEU A . n A 1 79 CYS 79 80 80 CYS CYS A . n A 1 80 ASP 80 81 81 ASP ASP A . n A 1 81 GLU 81 82 82 GLU GLU A . n A 1 82 TRP 82 83 83 TRP TRP A . n A 1 83 ILE 83 84 84 ILE ILE A . n A 1 84 ILE 84 85 85 ILE ILE A . n A 1 85 THR 85 86 86 THR THR A . n A 1 86 SER 86 87 87 SER SER A . n A 1 87 ASP 87 88 88 ASP ASP A . n A 1 88 LYS 88 89 89 LYS LYS A . n A 1 89 ASP 89 90 90 ASP ASP A . n A 1 90 PHE 90 91 91 PHE PHE A . n A 1 91 PHE 91 92 92 PHE PHE A . n A 1 92 GLU 92 93 93 GLU GLU A . n A 1 93 LYS 93 94 94 LYS LYS A . n A 1 94 LEU 94 95 95 LEU LEU A . n A 1 95 ASP 95 96 96 ASP ASP A . n A 1 96 GLU 96 97 97 GLU GLU A . n A 1 97 GLU 97 98 98 GLU GLU A . n A 1 98 GLN 98 99 99 GLN GLN A . n A 1 99 THR 99 100 100 THR THR A . n A 1 100 ARG 100 101 101 ARG ARG A . n A 1 101 THR 101 102 102 THR THR A . n A 1 102 PHE 102 103 103 PHE PHE A . n A 1 103 PHE 103 104 104 PHE PHE A . n A 1 104 GLU 104 105 105 GLU GLU A . n A 1 105 THR 105 106 106 THR THR A . n A 1 106 ALA 106 107 107 ALA ALA A . n A 1 107 LYS 107 108 108 LYS LYS A . n A 1 108 ASN 108 109 109 ASN ASN A . n A 1 109 TYR 109 110 110 TYR TYR A . n A 1 110 PHE 110 111 111 PHE PHE A . n A 1 111 ALA 111 112 112 ALA ALA A . n A 1 112 GLU 112 113 113 GLU GLU A . n A 1 113 ASN 113 114 114 ASN ASN A . n A 1 114 TYR 114 115 115 TYR TYR A . n A 1 115 GLY 115 116 116 GLY GLY A . n A 1 116 GLU 116 117 117 GLU GLU A . n A 1 117 SER 117 118 118 SER SER A . n A 1 118 ASN 118 119 119 ASN ASN A . n A 1 119 ILE 119 120 120 ILE ILE A . n A 1 120 ALA 120 121 121 ALA ALA A . n A 1 121 TYR 121 122 122 TYR TYR A . n A 1 122 ALA 122 123 123 ALA ALA A . n A 1 123 SER 123 124 124 SER SER A . n A 1 124 VAL 124 125 125 VAL VAL A . n A 1 125 HIS 125 126 126 HIS HIS A . n A 1 126 LEU 126 127 127 LEU LEU A . n A 1 127 ASP 127 128 128 ASP ASP A . n A 1 128 GLU 128 129 129 GLU GLU A . n A 1 129 SER 129 130 130 SER SER A . n A 1 130 THR 130 131 131 THR THR A . n A 1 131 PRO 131 132 132 PRO PRO A . n A 1 132 HIS 132 133 133 HIS HIS A . n A 1 133 MET 133 134 134 MET MET A . n A 1 134 HIS 134 135 135 HIS HIS A . n A 1 135 MET 135 136 136 MET MET A . n A 1 136 GLY 136 137 137 GLY GLY A . n A 1 137 VAL 137 138 138 VAL VAL A . n A 1 138 VAL 138 139 139 VAL VAL A . n A 1 139 PRO 139 140 140 PRO PRO A . n A 1 140 PHE 140 141 141 PHE PHE A . n A 1 141 GLU 141 142 142 GLU GLU A . n A 1 142 ASN 142 143 143 ASN ASN A . n A 1 143 GLY 143 144 144 GLY GLY A . n A 1 144 LYS 144 145 145 LYS LYS A . n A 1 145 LEU 145 146 146 LEU LEU A . n A 1 146 SER 146 147 147 SER SER A . n A 1 147 SER 147 148 148 SER SER A . n A 1 148 LYS 148 149 149 LYS LYS A . n A 1 149 ALA 149 150 150 ALA ALA A . n A 1 150 MET 150 151 151 MET MET A . n A 1 151 PHE 151 152 152 PHE PHE A . n A 1 152 ASP 152 153 153 ASP ASP A . n A 1 153 ARG 153 154 154 ARG ARG A . n A 1 154 GLU 154 155 155 GLU GLU A . n A 1 155 GLU 155 156 156 GLU GLU A . n A 1 156 LEU 156 157 157 LEU LEU A . n A 1 157 LYS 157 158 158 LYS LYS A . n A 1 158 HIS 158 159 159 HIS HIS A . n A 1 159 ILE 159 160 160 ILE ILE A . n A 1 160 GLN 160 161 161 GLN GLN A . n A 1 161 GLU 161 162 162 GLU GLU A . n A 1 162 ASP 162 163 163 ASP ASP A . n A 1 163 LEU 163 164 164 LEU LEU A . n A 1 164 PRO 164 165 165 PRO PRO A . n A 1 165 ARG 165 166 166 ARG ARG A . n A 1 166 TYR 166 167 167 TYR TYR A . n A 1 167 MET 167 168 168 MET MET A . n A 1 168 SER 168 169 169 SER SER A . n A 1 169 ASP 169 170 170 ASP ASP A . n A 1 170 HIS 170 171 171 HIS HIS A . n A 1 171 GLY 171 172 172 GLY GLY A . n A 1 172 PHE 172 173 173 PHE PHE A . n A 1 173 GLU 173 174 174 GLU GLU A . n A 1 174 LEU 174 175 175 LEU LEU A . n A 1 175 GLU 175 176 176 GLU GLU A . n A 1 176 ARG 176 177 177 ARG ARG A . n A 1 177 GLY 177 178 178 GLY GLY A . n A 1 178 LYS 178 179 179 LYS LYS A . n A 1 179 LEU 179 180 180 LEU LEU A . n A 1 180 ASN 180 181 181 ASN ASN A . n A 1 181 SER 181 182 182 SER SER A . n A 1 182 GLU 182 183 183 GLU GLU A . n A 1 183 ALA 183 184 184 ALA ALA A . n A 1 184 LYS 184 185 185 LYS LYS A . n A 1 185 HIS 185 186 186 HIS HIS A . n A 1 186 LYS 186 187 187 LYS LYS A . n A 1 187 THR 187 188 188 THR THR A . n A 1 188 VAL 188 189 189 VAL VAL A . n A 1 189 ALA 189 190 190 ALA ALA A . n A 1 190 GLU 190 191 191 GLU GLU A . n A 1 191 PHE 191 192 192 PHE PHE A . n A 1 192 LYS 192 193 193 LYS LYS A . n A 1 193 ARG 193 194 194 ARG ARG A . n A 1 194 ALA 194 195 195 ALA ALA A . n A 1 195 MET 195 196 196 MET MET A . n A 1 196 ALA 196 197 197 ALA ALA A . n A 1 197 ASP 197 198 ? ? ? A . n A 1 198 MET 198 199 ? ? ? A . n B 2 1 DA 1 1 1 DA DA B . n B 2 2 DC 2 2 2 DC DC B . n B 2 3 DT 3 3 3 DT DT B . n B 2 4 DT 4 4 4 DT DT B . n B 2 5 DT 5 5 5 DT DT B . n B 2 6 DA 6 6 6 DA DA B . n B 2 7 DT 7 7 7 DT DT B . n C 3 1 DA 1 12 12 DA DA C . n C 3 2 DT 2 13 13 DT DT C . n C 3 3 DA 3 14 14 DA DA C . n C 3 4 DA 4 15 15 DA DA C . n C 3 5 DA 5 16 16 DA DA C . n C 3 6 DG 6 17 17 DG DG C . n C 3 7 DT 7 18 18 DT DT C . n C 3 8 DA 8 19 19 DA DA C . n C 3 9 DT 9 20 20 DT DT C . n C 3 10 DA 10 21 21 DA DA C . n C 3 11 DG 11 22 22 DG DG C . n C 3 12 DT 12 23 23 DT DT C . n C 3 13 DG 13 24 24 DG DG C . n C 3 14 DT 14 25 25 DT DT C . n C 3 15 DG 15 26 26 DG DG C . n C 3 16 TS6 16 27 27 TS6 RPS C . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 MN 1 201 201 MN MN A . E 5 CL 1 202 1 CL CL A . F 5 CL 1 203 1 CL CL A . G 5 CL 1 204 1 CL CL A . H 6 HOH 1 301 97 HOH HOH A . H 6 HOH 2 302 56 HOH HOH A . H 6 HOH 3 303 1 HOH HOH A . H 6 HOH 4 304 2 HOH HOH A . H 6 HOH 5 305 4 HOH HOH A . H 6 HOH 6 306 6 HOH HOH A . H 6 HOH 7 307 7 HOH HOH A . H 6 HOH 8 308 8 HOH HOH A . H 6 HOH 9 309 9 HOH HOH A . H 6 HOH 10 310 10 HOH HOH A . H 6 HOH 11 311 11 HOH HOH A . H 6 HOH 12 312 12 HOH HOH A . H 6 HOH 13 313 13 HOH HOH A . H 6 HOH 14 314 14 HOH HOH A . H 6 HOH 15 315 15 HOH HOH A . H 6 HOH 16 316 18 HOH HOH A . H 6 HOH 17 317 19 HOH HOH A . H 6 HOH 18 318 21 HOH HOH A . H 6 HOH 19 319 23 HOH HOH A . H 6 HOH 20 320 24 HOH HOH A . H 6 HOH 21 321 26 HOH HOH A . H 6 HOH 22 322 28 HOH HOH A . H 6 HOH 23 323 31 HOH HOH A . H 6 HOH 24 324 32 HOH HOH A . H 6 HOH 25 325 33 HOH HOH A . H 6 HOH 26 326 37 HOH HOH A . H 6 HOH 27 327 38 HOH HOH A . H 6 HOH 28 328 39 HOH HOH A . H 6 HOH 29 329 40 HOH HOH A . H 6 HOH 30 330 41 HOH HOH A . H 6 HOH 31 331 42 HOH HOH A . H 6 HOH 32 332 43 HOH HOH A . H 6 HOH 33 333 44 HOH HOH A . H 6 HOH 34 334 45 HOH HOH A . H 6 HOH 35 335 46 HOH HOH A . H 6 HOH 36 336 48 HOH HOH A . H 6 HOH 37 337 49 HOH HOH A . H 6 HOH 38 338 50 HOH HOH A . H 6 HOH 39 339 51 HOH HOH A . H 6 HOH 40 340 53 HOH HOH A . H 6 HOH 41 341 54 HOH HOH A . H 6 HOH 42 342 55 HOH HOH A . H 6 HOH 43 343 57 HOH HOH A . H 6 HOH 44 344 60 HOH HOH A . H 6 HOH 45 345 61 HOH HOH A . H 6 HOH 46 346 63 HOH HOH A . H 6 HOH 47 347 64 HOH HOH A . H 6 HOH 48 348 65 HOH HOH A . H 6 HOH 49 349 66 HOH HOH A . H 6 HOH 50 350 67 HOH HOH A . H 6 HOH 51 351 71 HOH HOH A . H 6 HOH 52 352 72 HOH HOH A . H 6 HOH 53 353 73 HOH HOH A . H 6 HOH 54 354 78 HOH HOH A . H 6 HOH 55 355 79 HOH HOH A . H 6 HOH 56 356 80 HOH HOH A . H 6 HOH 57 357 82 HOH HOH A . H 6 HOH 58 358 87 HOH HOH A . H 6 HOH 59 359 88 HOH HOH A . H 6 HOH 60 360 89 HOH HOH A . H 6 HOH 61 361 90 HOH HOH A . H 6 HOH 62 362 91 HOH HOH A . H 6 HOH 63 363 92 HOH HOH A . H 6 HOH 64 364 93 HOH HOH A . H 6 HOH 65 365 94 HOH HOH A . H 6 HOH 66 366 95 HOH HOH A . H 6 HOH 67 367 100 HOH HOH A . H 6 HOH 68 368 101 HOH HOH A . H 6 HOH 69 369 102 HOH HOH A . H 6 HOH 70 370 110 HOH HOH A . H 6 HOH 71 371 111 HOH HOH A . H 6 HOH 72 372 113 HOH HOH A . H 6 HOH 73 373 118 HOH HOH A . H 6 HOH 74 374 123 HOH HOH A . H 6 HOH 75 375 125 HOH HOH A . H 6 HOH 76 376 129 HOH HOH A . H 6 HOH 77 377 139 HOH HOH A . H 6 HOH 78 378 144 HOH HOH A . H 6 HOH 79 379 147 HOH HOH A . H 6 HOH 80 380 148 HOH HOH A . H 6 HOH 81 381 152 HOH HOH A . H 6 HOH 82 382 160 HOH HOH A . H 6 HOH 83 383 166 HOH HOH A . H 6 HOH 84 384 177 HOH HOH A . H 6 HOH 85 385 253 HOH HOH A . H 6 HOH 86 386 254 HOH HOH A . H 6 HOH 87 387 255 HOH HOH A . H 6 HOH 88 388 261 HOH HOH A . H 6 HOH 89 389 266 HOH HOH A . H 6 HOH 90 390 269 HOH HOH A . H 6 HOH 91 391 272 HOH HOH A . H 6 HOH 92 392 275 HOH HOH A . H 6 HOH 93 393 277 HOH HOH A . H 6 HOH 94 394 278 HOH HOH A . H 6 HOH 95 395 285 HOH HOH A . H 6 HOH 96 396 288 HOH HOH A . H 6 HOH 97 397 289 HOH HOH A . H 6 HOH 98 398 290 HOH HOH A . H 6 HOH 99 399 291 HOH HOH A . H 6 HOH 100 400 292 HOH HOH A . H 6 HOH 101 401 293 HOH HOH A . H 6 HOH 102 402 294 HOH HOH A . H 6 HOH 103 403 296 HOH HOH A . H 6 HOH 104 404 297 HOH HOH A . H 6 HOH 105 405 298 HOH HOH A . H 6 HOH 106 406 299 HOH HOH A . H 6 HOH 107 407 300 HOH HOH A . H 6 HOH 108 408 301 HOH HOH A . H 6 HOH 109 409 302 HOH HOH A . H 6 HOH 110 410 303 HOH HOH A . H 6 HOH 111 411 304 HOH HOH A . H 6 HOH 112 412 305 HOH HOH A . H 6 HOH 113 413 306 HOH HOH A . H 6 HOH 114 414 308 HOH HOH A . H 6 HOH 115 415 309 HOH HOH A . H 6 HOH 116 416 316 HOH HOH A . H 6 HOH 117 417 318 HOH HOH A . H 6 HOH 118 418 319 HOH HOH A . H 6 HOH 119 419 320 HOH HOH A . H 6 HOH 120 420 323 HOH HOH A . H 6 HOH 121 421 327 HOH HOH A . H 6 HOH 122 422 329 HOH HOH A . H 6 HOH 123 423 330 HOH HOH A . H 6 HOH 124 424 331 HOH HOH A . H 6 HOH 125 425 333 HOH HOH A . H 6 HOH 126 426 339 HOH HOH A . H 6 HOH 127 427 340 HOH HOH A . I 6 HOH 1 101 52 HOH HOH B . I 6 HOH 2 102 108 HOH HOH B . I 6 HOH 3 103 314 HOH HOH B . J 6 HOH 1 201 3 HOH HOH C . J 6 HOH 2 202 5 HOH HOH C . J 6 HOH 3 203 16 HOH HOH C . J 6 HOH 4 204 17 HOH HOH C . J 6 HOH 5 205 20 HOH HOH C . J 6 HOH 6 206 25 HOH HOH C . J 6 HOH 7 207 36 HOH HOH C . J 6 HOH 8 208 59 HOH HOH C . J 6 HOH 9 209 70 HOH HOH C . J 6 HOH 10 210 75 HOH HOH C . J 6 HOH 11 211 81 HOH HOH C . J 6 HOH 12 212 85 HOH HOH C . J 6 HOH 13 213 86 HOH HOH C . J 6 HOH 14 214 98 HOH HOH C . J 6 HOH 15 215 99 HOH HOH C . J 6 HOH 16 216 105 HOH HOH C . J 6 HOH 17 217 115 HOH HOH C . J 6 HOH 18 218 138 HOH HOH C . J 6 HOH 19 219 252 HOH HOH C . J 6 HOH 20 220 260 HOH HOH C . J 6 HOH 21 221 262 HOH HOH C . J 6 HOH 22 222 315 HOH HOH C . J 6 HOH 23 223 317 HOH HOH C . J 6 HOH 24 224 326 HOH HOH C . J 6 HOH 25 225 328 HOH HOH C . J 6 HOH 26 226 332 HOH HOH C . J 6 HOH 27 227 334 HOH HOH C . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BEST 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 iMOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4LVL _cell.length_a 112.420 _cell.length_b 112.420 _cell.length_c 90.650 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LVL _symmetry.space_group_name_H-M 'P 61 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 178 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4LVL _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 55.33 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, seeding' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.8 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '22% PEG 6000, 0.3M sodium cloride, 0.1M sodium acetate, pH 4.6, VAPOR DIFFUSION, seeding, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2011-12-01 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.87260 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.87260 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4LVL _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 41.1 _reflns.d_resolution_high 2.2 _reflns.number_obs 16824 _reflns.number_all ? _reflns.percent_possible_obs 100 _reflns.pdbx_Rmerge_I_obs 0.157 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 7.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.1 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.20 _reflns_shell.d_res_low 2.32 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4LVL _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 16822 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.80 _refine.ls_d_res_high 2.20 _refine.ls_percent_reflns_obs 99.93 _refine.ls_R_factor_obs 0.18904 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.18652 _refine.ls_R_factor_R_free 0.23739 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 865 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.951 _refine.correlation_coeff_Fo_to_Fc_free 0.931 _refine.B_iso_mean 33.084 _refine.aniso_B[1][1] 0.02 _refine.aniso_B[2][2] 0.02 _refine.aniso_B[3][3] -0.07 _refine.aniso_B[1][2] 0.02 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.229 _refine.pdbx_overall_ESU_R_Free 0.196 _refine.overall_SU_ML 0.149 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.559 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1608 _refine_hist.pdbx_number_atoms_nucleic_acid 449 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 157 _refine_hist.number_atoms_total 2222 _refine_hist.d_res_high 2.20 _refine_hist.d_res_low 36.80 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.012 0.017 ? 2237 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.488 1.743 ? 3102 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.573 5.000 ? 213 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 34.251 24.545 ? 99 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.429 15.000 ? 324 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 25.398 15.000 ? 12 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 301 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.008 0.020 ? 1594 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.789 1.544 ? 822 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.293 2.312 ? 1039 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.169 1.606 ? 1414 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.200 _refine_ls_shell.d_res_low 2.257 _refine_ls_shell.number_reflns_R_work 1236 _refine_ls_shell.R_factor_R_work 0.275 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.368 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4LVL _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4LVL _struct.title ;MobM Relaxase Domain (MOBV; Mob_Pre) bound to plasmid pMV158 oriT DNA (22nt+3'Thiophosphate). Mn-bound crystal structure at pH 6.8 ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LVL _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text ;Protein-DNA complex, Pfam Family: Mob_Pre (PF01076). MOB Relaxase Family: MOBv, relaxase/endonuclease, oriT DNA, DNA BINDING PROTEIN-DNA complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 6 ? J N N 6 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP PRE_STRAG P13925 ? 1 ;SYMVARMQKMKAGNLGGAFKHNERVFETHSNKDINPSRSHLNYELTDRDRSVSYEKQIKDYVNENKVSNRAIRKDAVLCD EWIITSDKDFFEKLDEEQTRTFFETAKNYFAENYGESNIAYASVHLDESTPHMHMGVVPFENGKLSSKAMFDREELKHIQ EDLPRYMSDHGFELERGKLNSEAKHKTVAEFKRAMADM ; 2 2 PDB 4LVL 4LVL ? 2 ? 1 3 PDB 4LVL 4LVL ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LVL A 1 ? 198 ? P13925 2 ? 199 ? 2 199 2 2 4LVL B 1 ? 7 ? 4LVL 1 ? 7 ? 1 7 3 3 4LVL C 1 ? 16 ? 4LVL 12 ? 27 ? 12 27 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 author_and_software_defined_assembly PISA trimeric 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 5370 ? 2 MORE -54 ? 2 'SSA (A^2)' 12430 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J 2 1 A,B,C,D,E,F,G,H,I,J # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 11 ? GLU A 23 ? LYS A 12 GLU A 24 1 ? 13 HELX_P HELX_P2 2 ASN A 35 ? ASN A 42 ? ASN A 36 ASN A 43 5 ? 8 HELX_P HELX_P3 3 SER A 53 ? GLU A 64 ? SER A 54 GLU A 65 1 ? 12 HELX_P HELX_P4 4 ASP A 87 ? LYS A 93 ? ASP A 88 LYS A 94 1 ? 7 HELX_P HELX_P5 5 ASP A 95 ? GLY A 115 ? ASP A 96 GLY A 116 1 ? 21 HELX_P HELX_P6 6 SER A 146 ? PHE A 151 ? SER A 147 PHE A 152 1 ? 6 HELX_P HELX_P7 7 ASP A 152 ? HIS A 170 ? ASP A 153 HIS A 171 1 ? 19 HELX_P HELX_P8 8 THR A 187 ? MET A 195 ? THR A 188 MET A 196 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale one ? C DG 15 "O3'" ? ? ? 1_555 C TS6 16 P ? ? C DG 26 C TS6 27 1_555 ? ? ? ? ? ? ? 1.608 ? ? metalc1 metalc ? ? A HIS 125 ND1 ? ? ? 1_555 D MN . MN ? ? A HIS 126 A MN 201 1_555 ? ? ? ? ? ? ? 2.282 ? ? metalc2 metalc ? ? A GLU 128 OE2 ? ? ? 1_555 D MN . MN ? ? A GLU 129 A MN 201 1_555 ? ? ? ? ? ? ? 2.272 ? ? metalc3 metalc ? ? A HIS 132 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 133 A MN 201 1_555 ? ? ? ? ? ? ? 2.212 ? ? metalc4 metalc ? ? A HIS 134 NE2 ? ? ? 1_555 D MN . MN ? ? A HIS 135 A MN 201 1_555 ? ? ? ? ? ? ? 2.354 ? ? metalc5 metalc ? ? D MN . MN ? ? ? 1_555 C DG 15 "O3'" ? ? A MN 201 C DG 26 1_555 ? ? ? ? ? ? ? 2.239 ? ? metalc6 metalc ? ? D MN . MN ? ? ? 1_555 C TS6 16 O3P ? ? A MN 201 C TS6 27 1_555 ? ? ? ? ? ? ? 2.319 ? ? hydrog1 hydrog ? ? B DA 1 N1 ? ? ? 1_555 C DT 7 N3 ? ? B DA 1 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DA 1 N6 ? ? ? 1_555 C DT 7 O4 ? ? B DA 1 C DT 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 2 N3 ? ? ? 1_555 C DG 6 N1 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DC 2 N4 ? ? ? 1_555 C DG 6 O6 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DC 2 O2 ? ? ? 1_555 C DG 6 N2 ? ? B DC 2 C DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DT 3 N3 ? ? ? 1_555 C DA 5 N1 ? ? B DT 3 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DT 3 O4 ? ? ? 1_555 C DA 5 N6 ? ? B DT 3 C DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DT 4 N3 ? ? ? 1_555 C DA 4 N1 ? ? B DT 4 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DT 4 O4 ? ? ? 1_555 C DA 4 N6 ? ? B DT 4 C DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 3 N1 ? ? B DT 5 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 3 N6 ? ? B DT 5 C DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 2 N3 ? ? B DA 6 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 2 O4 ? ? B DA 6 C DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 1 N1 ? ? B DT 7 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 1 N6 ? ? B DT 7 C DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DT 12 N3 ? ? ? 1_555 C DG 15 O6 ? ? C DT 23 C DG 26 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog17 hydrog ? ? C DT 12 O2 ? ? ? 1_555 C DG 15 N1 ? ? C DT 23 C DG 26 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? hydrog ? ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 95.0 ? 2 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 111.4 ? 3 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 84.3 ? 4 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 88.2 ? 5 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 176.8 ? 6 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 94.6 ? 7 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 158.2 ? 8 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 83.4 ? 9 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 90.2 ? 10 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 "O3'" ? C DG 15 ? C DG 26 ? 1_555 93.7 ? 11 ND1 ? A HIS 125 ? A HIS 126 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 O3P ? C TS6 16 ? C TS6 27 ? 1_555 91.6 ? 12 OE2 ? A GLU 128 ? A GLU 129 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 O3P ? C TS6 16 ? C TS6 27 ? 1_555 88.0 ? 13 NE2 ? A HIS 132 ? A HIS 133 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 O3P ? C TS6 16 ? C TS6 27 ? 1_555 156.3 ? 14 NE2 ? A HIS 134 ? A HIS 135 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 O3P ? C TS6 16 ? C TS6 27 ? 1_555 91.8 ? 15 "O3'" ? C DG 15 ? C DG 26 ? 1_555 MN ? D MN . ? A MN 201 ? 1_555 O3P ? C TS6 16 ? C TS6 27 ? 1_555 66.6 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 4 ? MET A 10 ? VAL A 5 MET A 11 A 2 CYS A 79 ? THR A 85 ? CYS A 80 THR A 86 A 3 HIS A 132 ? VAL A 137 ? HIS A 133 VAL A 138 A 4 ILE A 119 ? HIS A 125 ? ILE A 120 HIS A 126 A 5 TYR A 43 ? GLU A 44 ? TYR A 44 GLU A 45 B 1 PHE A 140 ? GLU A 141 ? PHE A 141 GLU A 142 B 2 LYS A 144 ? LEU A 145 ? LYS A 145 LEU A 146 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLN A 8 ? N GLN A 9 O GLU A 81 ? O GLU A 82 A 2 3 N TRP A 82 ? N TRP A 83 O MET A 135 ? O MET A 136 A 3 4 O HIS A 132 ? O HIS A 133 N HIS A 125 ? N HIS A 126 A 4 5 O VAL A 124 ? O VAL A 125 N TYR A 43 ? N TYR A 44 B 1 2 N GLU A 141 ? N GLU A 142 O LYS A 144 ? O LYS A 145 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MN 201 ? 6 'BINDING SITE FOR RESIDUE MN A 201' AC2 Software A CL 202 ? 1 'BINDING SITE FOR RESIDUE CL A 202' AC3 Software A CL 203 ? 1 'BINDING SITE FOR RESIDUE CL A 203' AC4 Software A CL 204 ? 1 'BINDING SITE FOR RESIDUE CL A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 HIS A 125 ? HIS A 126 . ? 1_555 ? 2 AC1 6 GLU A 128 ? GLU A 129 . ? 1_555 ? 3 AC1 6 HIS A 132 ? HIS A 133 . ? 1_555 ? 4 AC1 6 HIS A 134 ? HIS A 135 . ? 1_555 ? 5 AC1 6 DG C 15 ? DG C 26 . ? 1_555 ? 6 AC1 6 TS6 C 16 ? TS6 C 27 . ? 1_555 ? 7 AC2 1 ALA A 189 ? ALA A 190 . ? 1_555 ? 8 AC3 1 ASP A 49 ? ASP A 50 . ? 1_555 ? 9 AC4 1 ASN A 69 ? ASN A 70 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 408 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 409 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 48 ? A -91.47 31.02 2 1 SER A 87 ? ? -159.68 -159.69 3 1 ALA A 123 ? ? -150.28 86.82 4 1 GLU A 129 ? ? -120.77 -157.26 5 1 SER A 147 ? ? -161.49 103.44 6 1 PHE A 152 ? ? -112.31 78.10 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 10.7430 -46.0153 -1.6326 0.0227 0.0856 0.1793 -0.0077 -0.0600 -0.0061 1.1458 2.8102 5.0033 1.7527 0.2337 -0.2612 -0.0682 0.1005 0.0396 -0.0557 0.0844 -0.0336 -0.0140 0.5061 -0.0162 'X-RAY DIFFRACTION' 2 ? refined 19.8250 -48.5769 -14.4987 0.5001 0.5468 0.6343 -0.0040 0.0974 -0.0458 6.5741 20.8599 16.5244 11.1481 -1.2167 -7.6470 0.0147 -0.0189 0.3163 0.1764 -0.0996 0.5069 -0.3603 0.6223 0.0849 'X-RAY DIFFRACTION' 3 ? refined 10.8428 -40.2665 -14.3241 0.1712 0.1950 0.1000 0.1015 0.0793 0.0871 4.5240 0.3140 9.1314 -0.0996 -0.5967 -0.6884 0.1653 0.6824 0.0071 -0.1496 -0.1995 -0.1416 -0.5023 0.2616 0.0342 'X-RAY DIFFRACTION' 4 ? refined 14.4475 -37.5268 6.1115 0.0878 0.1093 0.0777 -0.0869 -0.0115 -0.0088 3.5120 1.7570 5.0245 0.8154 1.8980 0.4972 -0.1291 0.0228 0.0785 0.0642 0.0761 -0.1959 -0.6189 0.6652 0.0530 'X-RAY DIFFRACTION' 5 ? refined 2.2642 -38.8200 -1.8004 0.0309 0.0194 0.0643 0.0189 -0.0017 -0.0034 1.9824 1.0798 7.1377 0.2135 0.8424 0.0103 -0.0467 0.0335 0.1209 0.0760 -0.0122 0.1048 -0.4208 -0.3373 0.0589 'X-RAY DIFFRACTION' 6 ? refined -4.2096 -49.9414 -0.7790 0.0706 0.1791 0.1147 -0.0516 -0.0052 -0.0063 4.0917 3.4656 4.7097 -2.2287 0.0506 0.7966 0.1264 0.2934 -0.5202 -0.2075 -0.2187 0.4105 0.4389 -0.7204 0.0922 'X-RAY DIFFRACTION' 7 ? refined 16.2756 -48.1219 23.7921 0.1399 0.1585 0.0896 -0.0059 -0.0274 0.0130 10.8809 9.3872 4.2080 4.4884 -0.3667 1.1293 0.0260 -0.4268 -0.7069 0.8259 -0.2224 -0.2249 0.2613 0.2288 0.1964 'X-RAY DIFFRACTION' 8 ? refined 13.8704 -44.5007 24.4133 0.1028 0.2141 0.0861 -0.0092 -0.0230 0.0063 5.7043 4.8374 13.8020 0.9414 6.4682 3.3291 0.0157 -0.8118 0.0947 0.4400 0.0596 -0.1326 -0.2947 -0.8580 -0.0754 'X-RAY DIFFRACTION' 9 ? refined 1.0943 -52.8250 0.4823 0.1858 0.0631 0.2377 -0.0813 -0.0558 0.0193 5.5798 1.1093 5.9428 -2.4287 -1.9581 0.4958 -0.0183 -0.1429 -0.1296 -0.0347 0.0641 -0.0175 0.8820 -0.1927 -0.0458 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 2 ? ? A 26 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 27 ? ? A 31 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 32 ? ? A 50 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 51 ? ? A 89 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 90 ? ? A 156 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 157 ? ? A 197 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 1 ? ? B 7 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 C 12 ? ? C 18 ? ? ? ? 'X-RAY DIFFRACTION' 9 9 C 19 ? ? C 26 ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ASP 198 ? A ASP 197 2 1 Y 1 A MET 199 ? A MET 198 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 DA OP3 O N N 89 DA P P N N 90 DA OP1 O N N 91 DA OP2 O N N 92 DA "O5'" O N N 93 DA "C5'" C N N 94 DA "C4'" C N R 95 DA "O4'" O N N 96 DA "C3'" C N S 97 DA "O3'" O N N 98 DA "C2'" C N N 99 DA "C1'" C N R 100 DA N9 N Y N 101 DA C8 C Y N 102 DA N7 N Y N 103 DA C5 C Y N 104 DA C6 C Y N 105 DA N6 N N N 106 DA N1 N Y N 107 DA C2 C Y N 108 DA N3 N Y N 109 DA C4 C Y N 110 DA HOP3 H N N 111 DA HOP2 H N N 112 DA "H5'" H N N 113 DA "H5''" H N N 114 DA "H4'" H N N 115 DA "H3'" H N N 116 DA "HO3'" H N N 117 DA "H2'" H N N 118 DA "H2''" H N N 119 DA "H1'" H N N 120 DA H8 H N N 121 DA H61 H N N 122 DA H62 H N N 123 DA H2 H N N 124 DC OP3 O N N 125 DC P P N N 126 DC OP1 O N N 127 DC OP2 O N N 128 DC "O5'" O N N 129 DC "C5'" C N N 130 DC "C4'" C N R 131 DC "O4'" O N N 132 DC "C3'" C N S 133 DC "O3'" O N N 134 DC "C2'" C N N 135 DC "C1'" C N R 136 DC N1 N N N 137 DC C2 C N N 138 DC O2 O N N 139 DC N3 N N N 140 DC C4 C N N 141 DC N4 N N N 142 DC C5 C N N 143 DC C6 C N N 144 DC HOP3 H N N 145 DC HOP2 H N N 146 DC "H5'" H N N 147 DC "H5''" H N N 148 DC "H4'" H N N 149 DC "H3'" H N N 150 DC "HO3'" H N N 151 DC "H2'" H N N 152 DC "H2''" H N N 153 DC "H1'" H N N 154 DC H41 H N N 155 DC H42 H N N 156 DC H5 H N N 157 DC H6 H N N 158 DG OP3 O N N 159 DG P P N N 160 DG OP1 O N N 161 DG OP2 O N N 162 DG "O5'" O N N 163 DG "C5'" C N N 164 DG "C4'" C N R 165 DG "O4'" O N N 166 DG "C3'" C N S 167 DG "O3'" O N N 168 DG "C2'" C N N 169 DG "C1'" C N R 170 DG N9 N Y N 171 DG C8 C Y N 172 DG N7 N Y N 173 DG C5 C Y N 174 DG C6 C N N 175 DG O6 O N N 176 DG N1 N N N 177 DG C2 C N N 178 DG N2 N N N 179 DG N3 N N N 180 DG C4 C Y N 181 DG HOP3 H N N 182 DG HOP2 H N N 183 DG "H5'" H N N 184 DG "H5''" H N N 185 DG "H4'" H N N 186 DG "H3'" H N N 187 DG "HO3'" H N N 188 DG "H2'" H N N 189 DG "H2''" H N N 190 DG "H1'" H N N 191 DG H8 H N N 192 DG H1 H N N 193 DG H21 H N N 194 DG H22 H N N 195 DT OP3 O N N 196 DT P P N N 197 DT OP1 O N N 198 DT OP2 O N N 199 DT "O5'" O N N 200 DT "C5'" C N N 201 DT "C4'" C N R 202 DT "O4'" O N N 203 DT "C3'" C N S 204 DT "O3'" O N N 205 DT "C2'" C N N 206 DT "C1'" C N R 207 DT N1 N N N 208 DT C2 C N N 209 DT O2 O N N 210 DT N3 N N N 211 DT C4 C N N 212 DT O4 O N N 213 DT C5 C N N 214 DT C7 C N N 215 DT C6 C N N 216 DT HOP3 H N N 217 DT HOP2 H N N 218 DT "H5'" H N N 219 DT "H5''" H N N 220 DT "H4'" H N N 221 DT "H3'" H N N 222 DT "HO3'" H N N 223 DT "H2'" H N N 224 DT "H2''" H N N 225 DT "H1'" H N N 226 DT H3 H N N 227 DT H71 H N N 228 DT H72 H N N 229 DT H73 H N N 230 DT H6 H N N 231 GLN N N N N 232 GLN CA C N S 233 GLN C C N N 234 GLN O O N N 235 GLN CB C N N 236 GLN CG C N N 237 GLN CD C N N 238 GLN OE1 O N N 239 GLN NE2 N N N 240 GLN OXT O N N 241 GLN H H N N 242 GLN H2 H N N 243 GLN HA H N N 244 GLN HB2 H N N 245 GLN HB3 H N N 246 GLN HG2 H N N 247 GLN HG3 H N N 248 GLN HE21 H N N 249 GLN HE22 H N N 250 GLN HXT H N N 251 GLU N N N N 252 GLU CA C N S 253 GLU C C N N 254 GLU O O N N 255 GLU CB C N N 256 GLU CG C N N 257 GLU CD C N N 258 GLU OE1 O N N 259 GLU OE2 O N N 260 GLU OXT O N N 261 GLU H H N N 262 GLU H2 H N N 263 GLU HA H N N 264 GLU HB2 H N N 265 GLU HB3 H N N 266 GLU HG2 H N N 267 GLU HG3 H N N 268 GLU HE2 H N N 269 GLU HXT H N N 270 GLY N N N N 271 GLY CA C N N 272 GLY C C N N 273 GLY O O N N 274 GLY OXT O N N 275 GLY H H N N 276 GLY H2 H N N 277 GLY HA2 H N N 278 GLY HA3 H N N 279 GLY HXT H N N 280 HIS N N N N 281 HIS CA C N S 282 HIS C C N N 283 HIS O O N N 284 HIS CB C N N 285 HIS CG C Y N 286 HIS ND1 N Y N 287 HIS CD2 C Y N 288 HIS CE1 C Y N 289 HIS NE2 N Y N 290 HIS OXT O N N 291 HIS H H N N 292 HIS H2 H N N 293 HIS HA H N N 294 HIS HB2 H N N 295 HIS HB3 H N N 296 HIS HD1 H N N 297 HIS HD2 H N N 298 HIS HE1 H N N 299 HIS HE2 H N N 300 HIS HXT H N N 301 HOH O O N N 302 HOH H1 H N N 303 HOH H2 H N N 304 ILE N N N N 305 ILE CA C N S 306 ILE C C N N 307 ILE O O N N 308 ILE CB C N S 309 ILE CG1 C N N 310 ILE CG2 C N N 311 ILE CD1 C N N 312 ILE OXT O N N 313 ILE H H N N 314 ILE H2 H N N 315 ILE HA H N N 316 ILE HB H N N 317 ILE HG12 H N N 318 ILE HG13 H N N 319 ILE HG21 H N N 320 ILE HG22 H N N 321 ILE HG23 H N N 322 ILE HD11 H N N 323 ILE HD12 H N N 324 ILE HD13 H N N 325 ILE HXT H N N 326 LEU N N N N 327 LEU CA C N S 328 LEU C C N N 329 LEU O O N N 330 LEU CB C N N 331 LEU CG C N N 332 LEU CD1 C N N 333 LEU CD2 C N N 334 LEU OXT O N N 335 LEU H H N N 336 LEU H2 H N N 337 LEU HA H N N 338 LEU HB2 H N N 339 LEU HB3 H N N 340 LEU HG H N N 341 LEU HD11 H N N 342 LEU HD12 H N N 343 LEU HD13 H N N 344 LEU HD21 H N N 345 LEU HD22 H N N 346 LEU HD23 H N N 347 LEU HXT H N N 348 LYS N N N N 349 LYS CA C N S 350 LYS C C N N 351 LYS O O N N 352 LYS CB C N N 353 LYS CG C N N 354 LYS CD C N N 355 LYS CE C N N 356 LYS NZ N N N 357 LYS OXT O N N 358 LYS H H N N 359 LYS H2 H N N 360 LYS HA H N N 361 LYS HB2 H N N 362 LYS HB3 H N N 363 LYS HG2 H N N 364 LYS HG3 H N N 365 LYS HD2 H N N 366 LYS HD3 H N N 367 LYS HE2 H N N 368 LYS HE3 H N N 369 LYS HZ1 H N N 370 LYS HZ2 H N N 371 LYS HZ3 H N N 372 LYS HXT H N N 373 MET N N N N 374 MET CA C N S 375 MET C C N N 376 MET O O N N 377 MET CB C N N 378 MET CG C N N 379 MET SD S N N 380 MET CE C N N 381 MET OXT O N N 382 MET H H N N 383 MET H2 H N N 384 MET HA H N N 385 MET HB2 H N N 386 MET HB3 H N N 387 MET HG2 H N N 388 MET HG3 H N N 389 MET HE1 H N N 390 MET HE2 H N N 391 MET HE3 H N N 392 MET HXT H N N 393 MN MN MN N N 394 PHE N N N N 395 PHE CA C N S 396 PHE C C N N 397 PHE O O N N 398 PHE CB C N N 399 PHE CG C Y N 400 PHE CD1 C Y N 401 PHE CD2 C Y N 402 PHE CE1 C Y N 403 PHE CE2 C Y N 404 PHE CZ C Y N 405 PHE OXT O N N 406 PHE H H N N 407 PHE H2 H N N 408 PHE HA H N N 409 PHE HB2 H N N 410 PHE HB3 H N N 411 PHE HD1 H N N 412 PHE HD2 H N N 413 PHE HE1 H N N 414 PHE HE2 H N N 415 PHE HZ H N N 416 PHE HXT H N N 417 PRO N N N N 418 PRO CA C N S 419 PRO C C N N 420 PRO O O N N 421 PRO CB C N N 422 PRO CG C N N 423 PRO CD C N N 424 PRO OXT O N N 425 PRO H H N N 426 PRO HA H N N 427 PRO HB2 H N N 428 PRO HB3 H N N 429 PRO HG2 H N N 430 PRO HG3 H N N 431 PRO HD2 H N N 432 PRO HD3 H N N 433 PRO HXT H N N 434 SER N N N N 435 SER CA C N S 436 SER C C N N 437 SER O O N N 438 SER CB C N N 439 SER OG O N N 440 SER OXT O N N 441 SER H H N N 442 SER H2 H N N 443 SER HA H N N 444 SER HB2 H N N 445 SER HB3 H N N 446 SER HG H N N 447 SER HXT H N N 448 THR N N N N 449 THR CA C N S 450 THR C C N N 451 THR O O N N 452 THR CB C N R 453 THR OG1 O N N 454 THR CG2 C N N 455 THR OXT O N N 456 THR H H N N 457 THR H2 H N N 458 THR HA H N N 459 THR HB H N N 460 THR HG1 H N N 461 THR HG21 H N N 462 THR HG22 H N N 463 THR HG23 H N N 464 THR HXT H N N 465 TRP N N N N 466 TRP CA C N S 467 TRP C C N N 468 TRP O O N N 469 TRP CB C N N 470 TRP CG C Y N 471 TRP CD1 C Y N 472 TRP CD2 C Y N 473 TRP NE1 N Y N 474 TRP CE2 C Y N 475 TRP CE3 C Y N 476 TRP CZ2 C Y N 477 TRP CZ3 C Y N 478 TRP CH2 C Y N 479 TRP OXT O N N 480 TRP H H N N 481 TRP H2 H N N 482 TRP HA H N N 483 TRP HB2 H N N 484 TRP HB3 H N N 485 TRP HD1 H N N 486 TRP HE1 H N N 487 TRP HE3 H N N 488 TRP HZ2 H N N 489 TRP HZ3 H N N 490 TRP HH2 H N N 491 TRP HXT H N N 492 TS6 P P N N 493 TS6 O1P O N N 494 TS6 S2P S N N 495 TS6 O3P O N N 496 TS6 O4P O N N 497 TS6 HS2P H N N 498 TS6 HO3P H N N 499 TS6 HO4P H N N 500 TYR N N N N 501 TYR CA C N S 502 TYR C C N N 503 TYR O O N N 504 TYR CB C N N 505 TYR CG C Y N 506 TYR CD1 C Y N 507 TYR CD2 C Y N 508 TYR CE1 C Y N 509 TYR CE2 C Y N 510 TYR CZ C Y N 511 TYR OH O N N 512 TYR OXT O N N 513 TYR H H N N 514 TYR H2 H N N 515 TYR HA H N N 516 TYR HB2 H N N 517 TYR HB3 H N N 518 TYR HD1 H N N 519 TYR HD2 H N N 520 TYR HE1 H N N 521 TYR HE2 H N N 522 TYR HH H N N 523 TYR HXT H N N 524 VAL N N N N 525 VAL CA C N S 526 VAL C C N N 527 VAL O O N N 528 VAL CB C N N 529 VAL CG1 C N N 530 VAL CG2 C N N 531 VAL OXT O N N 532 VAL H H N N 533 VAL H2 H N N 534 VAL HA H N N 535 VAL HB H N N 536 VAL HG11 H N N 537 VAL HG12 H N N 538 VAL HG13 H N N 539 VAL HG21 H N N 540 VAL HG22 H N N 541 VAL HG23 H N N 542 VAL HXT H N N 543 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TS6 O1P P doub N N 483 TS6 S2P P sing N N 484 TS6 P O3P sing N N 485 TS6 P O4P sing N N 486 TS6 S2P HS2P sing N N 487 TS6 O3P HO3P sing N N 488 TS6 O4P HO4P sing N N 489 TYR N CA sing N N 490 TYR N H sing N N 491 TYR N H2 sing N N 492 TYR CA C sing N N 493 TYR CA CB sing N N 494 TYR CA HA sing N N 495 TYR C O doub N N 496 TYR C OXT sing N N 497 TYR CB CG sing N N 498 TYR CB HB2 sing N N 499 TYR CB HB3 sing N N 500 TYR CG CD1 doub Y N 501 TYR CG CD2 sing Y N 502 TYR CD1 CE1 sing Y N 503 TYR CD1 HD1 sing N N 504 TYR CD2 CE2 doub Y N 505 TYR CD2 HD2 sing N N 506 TYR CE1 CZ doub Y N 507 TYR CE1 HE1 sing N N 508 TYR CE2 CZ sing Y N 509 TYR CE2 HE2 sing N N 510 TYR CZ OH sing N N 511 TYR OH HH sing N N 512 TYR OXT HXT sing N N 513 VAL N CA sing N N 514 VAL N H sing N N 515 VAL N H2 sing N N 516 VAL CA C sing N N 517 VAL CA CB sing N N 518 VAL CA HA sing N N 519 VAL C O doub N N 520 VAL C OXT sing N N 521 VAL CB CG1 sing N N 522 VAL CB CG2 sing N N 523 VAL CB HB sing N N 524 VAL CG1 HG11 sing N N 525 VAL CG1 HG12 sing N N 526 VAL CG1 HG13 sing N N 527 VAL CG2 HG21 sing N N 528 VAL CG2 HG22 sing N N 529 VAL CG2 HG23 sing N N 530 VAL OXT HXT sing N N 531 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4LVL 'double helix' 4LVL 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DA 1 1_555 C DT 7 1_555 0.127 0.034 -0.246 0.484 2.971 2.771 1 B_DA1:DT18_C B 1 ? C 18 ? 20 1 1 B DC 2 1_555 C DG 6 1_555 0.182 -0.073 0.168 11.323 -21.658 3.020 2 B_DC2:DG17_C B 2 ? C 17 ? 19 1 1 B DT 3 1_555 C DA 5 1_555 -0.192 0.082 0.234 -17.891 -16.216 -0.117 3 B_DT3:DA16_C B 3 ? C 16 ? 20 1 1 B DT 4 1_555 C DA 4 1_555 -0.258 -0.248 -0.283 -8.957 -23.251 -0.025 4 B_DT4:DA15_C B 4 ? C 15 ? 20 1 1 B DT 5 1_555 C DA 3 1_555 -0.182 -0.245 -0.091 -17.715 -12.548 4.589 5 B_DT5:DA14_C B 5 ? C 14 ? 20 1 1 B DA 6 1_555 C DT 2 1_555 0.102 -0.068 -0.278 -4.036 -7.549 -3.591 6 B_DA6:DT13_C B 6 ? C 13 ? 20 1 1 B DT 7 1_555 C DA 1 1_555 -0.050 0.013 0.174 -0.531 -3.561 0.452 7 B_DT7:DA12_C B 7 ? C 12 ? 20 1 1 C DT 12 1_555 C DG 15 1_555 2.399 -0.461 -0.163 -3.342 -3.325 2.117 8 C_DT23:DG26_C C 23 ? C 26 ? 28 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DA 1 1_555 C DT 7 1_555 B DC 2 1_555 C DG 6 1_555 -0.561 -0.528 3.082 -6.111 2.701 32.132 -1.377 -0.007 3.080 4.815 10.894 32.802 1 BB_DA1DC2:DG17DT18_CC B 1 ? C 18 ? B 2 ? C 17 ? 1 B DC 2 1_555 C DG 6 1_555 B DT 3 1_555 C DA 5 1_555 0.152 -0.647 3.890 4.366 2.784 40.658 -1.285 0.348 3.835 3.988 -6.253 40.973 2 BB_DC2DT3:DA16DG17_CC B 2 ? C 17 ? B 3 ? C 16 ? 1 B DT 3 1_555 C DA 5 1_555 B DT 4 1_555 C DA 4 1_555 -0.695 -0.104 2.923 2.741 -2.777 35.079 0.194 1.506 2.862 -4.589 -4.530 35.288 3 BB_DT3DT4:DA15DA16_CC B 3 ? C 16 ? B 4 ? C 15 ? 1 B DT 4 1_555 C DA 4 1_555 B DT 5 1_555 C DA 3 1_555 0.703 0.415 3.480 0.229 2.635 38.345 0.280 -1.038 3.504 4.006 -0.348 38.433 4 BB_DT4DT5:DA14DA15_CC B 4 ? C 15 ? B 5 ? C 14 ? 1 B DT 5 1_555 C DA 3 1_555 B DA 6 1_555 C DT 2 1_555 -0.379 1.075 3.150 -0.612 9.323 29.713 0.195 0.588 3.333 17.640 1.157 31.115 5 BB_DT5DA6:DT13DA14_CC B 5 ? C 14 ? B 6 ? C 13 ? 1 B DA 6 1_555 C DT 2 1_555 B DT 7 1_555 C DA 1 1_555 0.752 -0.636 3.273 -3.460 -2.324 28.100 -0.764 -2.323 3.200 -4.754 7.076 28.401 6 BB_DA6DT7:DA12DT13_CC B 6 ? C 13 ? B 7 ? C 12 ? # _atom_sites.entry_id 4LVL _atom_sites.fract_transf_matrix[1][1] 0.008895 _atom_sites.fract_transf_matrix[1][2] 0.005136 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010271 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011031 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL MN N O P S # loop_