HEADER LYASE 26-JUL-13 4LW4 TITLE STRUCTURAL CHANGES DURING CYSTEINE DESULFURASE CSDA AND SULFUR- TITLE 2 ACCEPTOR CSDE INTERACTIONS PROVIDE INSIGHT INTO THE TRANS- TITLE 3 PERSULFURATION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CYSTEINE SULFINATE DESULFINASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: CSD; COMPND 5 EC: 4.4.1.-; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: CYSTEINE DESULFURATION PROTEIN CSDE; COMPND 9 CHAIN: C, D; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: B2810, CSDA, JW2781, YGDJ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 13 ORGANISM_TAXID: 714962; SOURCE 14 STRAIN: IHE3034; SOURCE 15 GENE: CSDE, ECOK1_3187; SOURCE 16 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 17 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 18 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 19 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 20 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CYSTEINE DESULFURASE, CSDA, SUFE, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.KIM,S.Y.PARK REVDAT 4 08-NOV-23 4LW4 1 REMARK REVDAT 3 24-AUG-22 4LW4 1 JRNL REMARK SEQADV LINK REVDAT 2 21-AUG-13 4LW4 1 JRNL REVDAT 1 07-AUG-13 4LW4 0 JRNL AUTH S.KIM,S.PARK JRNL TITL STRUCTURAL CHANGES DURING CYSTEINE DESULFURASE CSDA AND JRNL TITL 2 SULFUR ACCEPTOR CSDE INTERACTIONS PROVIDE INSIGHT INTO THE JRNL TITL 3 TRANS-PERSULFURATION. JRNL REF J.BIOL.CHEM. V. 288 27172 2013 JRNL REFN ESSN 1083-351X JRNL PMID 23913692 JRNL DOI 10.1074/JBC.M113.480277 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0110 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 63955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.218 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3406 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.06 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4501 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.28 REMARK 3 BIN R VALUE (WORKING SET) : 0.1810 REMARK 3 BIN FREE R VALUE SET COUNT : 218 REMARK 3 BIN FREE R VALUE : 0.2400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8137 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 685 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.13 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : -0.42000 REMARK 3 B33 (A**2) : -0.46000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.54000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.184 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.167 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.797 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8427 ; 0.023 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11481 ; 1.807 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1092 ; 6.183 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 370 ;35.609 ;24.270 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1348 ;16.005 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 53 ;17.974 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1305 ; 0.133 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6444 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5365 ; 1.111 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8563 ; 1.904 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3062 ; 3.305 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2906 ; 5.221 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4LW4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 31-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1000081159. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PAL/PLS REMARK 200 BEAMLINE : 7A (6B, 6C1) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 67595 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 86.520 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4LW2 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22% (W/V) POLYACRYLIC ACID 5100, 0.02M REMARK 280 MGCL2, 0.1M HEPES, PH 7.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 297K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 38.43550 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 49 REMARK 465 VAL A 50 REMARK 465 HIS A 51 REMARK 465 ARG A 52 REMARK 465 SER A 53 REMARK 465 GLN A 54 REMARK 465 ASP A 401 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 ASP B 401 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 GLY D -2 REMARK 465 SER D -1 REMARK 465 HIS D 0 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ASN D 3 REMARK 465 PRO D 4 REMARK 465 GLN D 5 REMARK 465 PHE D 6 REMARK 465 ALA D 7 REMARK 465 CYS D 61 REMARK 465 GLN D 146 REMARK 465 VAL D 147 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 10 CG2 THR A 381 1.91 REMARK 500 OD1 ASP A 151 NH1 ARG A 181 2.04 REMARK 500 O LEU C 44 NH1 ARG C 89 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 123 -56.86 -138.14 REMARK 500 VAL A 172 -63.29 -102.25 REMARK 500 LEU A 223 50.83 -97.48 REMARK 500 TRP A 245 -93.27 -99.16 REMARK 500 LYS A 250 -46.56 78.36 REMARK 500 HIS A 253 -67.79 -99.38 REMARK 500 ALA A 359 55.93 -146.28 REMARK 500 ALA B 19 151.09 -30.11 REMARK 500 SER B 53 -23.62 -145.57 REMARK 500 GLN B 54 53.89 -118.53 REMARK 500 LEU B 123 -56.41 -133.73 REMARK 500 LEU B 223 48.85 -97.85 REMARK 500 TRP B 245 -107.69 -102.61 REMARK 500 LYS B 250 -47.17 79.62 REMARK 500 HIS B 253 -72.93 -107.71 REMARK 500 ALA B 359 55.58 -141.96 REMARK 500 THR C 13 -75.47 -123.68 REMARK 500 ILE C 58 71.07 -100.51 REMARK 500 THR D 13 -81.50 -116.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PLP B 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LW2 RELATED DB: PDB REMARK 900 CYSTEINE DESULFURASE CSDA DBREF 4LW4 A 1 401 UNP Q46925 CSDA_ECOLI 1 401 DBREF 4LW4 B 1 401 UNP Q46925 CSDA_ECOLI 1 401 DBREF 4LW4 C 1 147 UNP D5CZ88 D5CZ88_ECOKI 1 147 DBREF 4LW4 D 1 147 UNP D5CZ88 D5CZ88_ECOKI 1 147 SEQADV 4LW4 GLY A -2 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 SER A -1 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 HIS A 0 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 GLY B -2 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 SER B -1 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 HIS B 0 UNP Q46925 EXPRESSION TAG SEQADV 4LW4 GLY C -2 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 SER C -1 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 HIS C 0 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 ASP C 49 UNP D5CZ88 GLU 49 ENGINEERED MUTATION SEQADV 4LW4 GLY D -2 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 SER D -1 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 HIS D 0 UNP D5CZ88 EXPRESSION TAG SEQADV 4LW4 ASP D 49 UNP D5CZ88 GLU 49 ENGINEERED MUTATION SEQRES 1 A 404 GLY SER HIS MET ASN VAL PHE ASN PRO ALA GLN PHE ARG SEQRES 2 A 404 ALA GLN PHE PRO ALA LEU GLN ASP ALA GLY VAL TYR LEU SEQRES 3 A 404 ASP SER ALA ALA THR ALA LEU LYS PRO GLU ALA VAL VAL SEQRES 4 A 404 GLU ALA THR GLN GLN PHE TYR SER LEU SER ALA GLY ASN SEQRES 5 A 404 VAL HIS ARG SER GLN PHE ALA GLU ALA GLN ARG LEU THR SEQRES 6 A 404 ALA ARG TYR GLU ALA ALA ARG GLU LYS VAL ALA GLN LEU SEQRES 7 A 404 LEU ASN ALA PRO ASP ASP LYS THR ILE VAL TRP THR ARG SEQRES 8 A 404 GLY THR THR GLU SER ILE ASN MET VAL ALA GLN CYS TYR SEQRES 9 A 404 ALA ARG PRO ARG LEU GLN PRO GLY ASP GLU ILE ILE VAL SEQRES 10 A 404 SER VAL ALA GLU HIS HIS ALA ASN LEU VAL PRO TRP LEU SEQRES 11 A 404 MET VAL ALA GLN GLN THR GLY ALA LYS VAL VAL LYS LEU SEQRES 12 A 404 PRO LEU ASN ALA GLN ARG LEU PRO ASP VAL ASP LEU LEU SEQRES 13 A 404 PRO GLU LEU ILE THR PRO ARG SER ARG ILE LEU ALA LEU SEQRES 14 A 404 GLY GLN MET SER ASN VAL THR GLY GLY CYS PRO ASP LEU SEQRES 15 A 404 ALA ARG ALA ILE THR PHE ALA HIS SER ALA GLY MET VAL SEQRES 16 A 404 VAL MET VAL ASP GLY ALA GLN GLY ALA VAL HIS PHE PRO SEQRES 17 A 404 ALA ASP VAL GLN GLN LEU ASP ILE ASP PHE TYR ALA PHE SEQRES 18 A 404 SER GLY HIS LYS LEU TYR GLY PRO THR GLY ILE GLY VAL SEQRES 19 A 404 LEU TYR GLY LYS SER GLU LEU LEU GLU ALA MET SER PRO SEQRES 20 A 404 TRP LEU GLY GLY GLY LYS MET VAL HIS GLU VAL SER PHE SEQRES 21 A 404 ASP GLY PHE THR THR GLN SER ALA PRO TRP LYS LEU GLU SEQRES 22 A 404 ALA GLY THR PRO ASN VAL ALA GLY VAL ILE GLY LEU SER SEQRES 23 A 404 ALA ALA LEU GLU TRP LEU ALA ASP TYR ASP ILE ASN GLN SEQRES 24 A 404 ALA GLU SER TRP SER ARG SER LEU ALA THR LEU ALA GLU SEQRES 25 A 404 ASP ALA LEU ALA LYS ARG PRO GLY PHE ARG SER PHE ARG SEQRES 26 A 404 CYS GLN ASP SER SER LEU LEU ALA PHE ASP PHE ALA GLY SEQRES 27 A 404 VAL HIS HIS SER ASP MET VAL THR LEU LEU ALA GLU TYR SEQRES 28 A 404 GLY ILE ALA LEU ARG ALA GLY GLN HIS CYS ALA GLN PRO SEQRES 29 A 404 LEU LEU ALA GLU LEU GLY VAL THR GLY THR LEU ARG ALA SEQRES 30 A 404 SER PHE ALA PRO TYR ASN THR LYS SER ASP VAL ASP ALA SEQRES 31 A 404 LEU VAL ASN ALA VAL ASP ARG ALA LEU GLU LEU LEU VAL SEQRES 32 A 404 ASP SEQRES 1 B 404 GLY SER HIS MET ASN VAL PHE ASN PRO ALA GLN PHE ARG SEQRES 2 B 404 ALA GLN PHE PRO ALA LEU GLN ASP ALA GLY VAL TYR LEU SEQRES 3 B 404 ASP SER ALA ALA THR ALA LEU LYS PRO GLU ALA VAL VAL SEQRES 4 B 404 GLU ALA THR GLN GLN PHE TYR SER LEU SER ALA GLY ASN SEQRES 5 B 404 VAL HIS ARG SER GLN PHE ALA GLU ALA GLN ARG LEU THR SEQRES 6 B 404 ALA ARG TYR GLU ALA ALA ARG GLU LYS VAL ALA GLN LEU SEQRES 7 B 404 LEU ASN ALA PRO ASP ASP LYS THR ILE VAL TRP THR ARG SEQRES 8 B 404 GLY THR THR GLU SER ILE ASN MET VAL ALA GLN CYS TYR SEQRES 9 B 404 ALA ARG PRO ARG LEU GLN PRO GLY ASP GLU ILE ILE VAL SEQRES 10 B 404 SER VAL ALA GLU HIS HIS ALA ASN LEU VAL PRO TRP LEU SEQRES 11 B 404 MET VAL ALA GLN GLN THR GLY ALA LYS VAL VAL LYS LEU SEQRES 12 B 404 PRO LEU ASN ALA GLN ARG LEU PRO ASP VAL ASP LEU LEU SEQRES 13 B 404 PRO GLU LEU ILE THR PRO ARG SER ARG ILE LEU ALA LEU SEQRES 14 B 404 GLY GLN MET SER ASN VAL THR GLY GLY CYS PRO ASP LEU SEQRES 15 B 404 ALA ARG ALA ILE THR PHE ALA HIS SER ALA GLY MET VAL SEQRES 16 B 404 VAL MET VAL ASP GLY ALA GLN GLY ALA VAL HIS PHE PRO SEQRES 17 B 404 ALA ASP VAL GLN GLN LEU ASP ILE ASP PHE TYR ALA PHE SEQRES 18 B 404 SER GLY HIS LYS LEU TYR GLY PRO THR GLY ILE GLY VAL SEQRES 19 B 404 LEU TYR GLY LYS SER GLU LEU LEU GLU ALA MET SER PRO SEQRES 20 B 404 TRP LEU GLY GLY GLY LYS MET VAL HIS GLU VAL SER PHE SEQRES 21 B 404 ASP GLY PHE THR THR GLN SER ALA PRO TRP LYS LEU GLU SEQRES 22 B 404 ALA GLY THR PRO ASN VAL ALA GLY VAL ILE GLY LEU SER SEQRES 23 B 404 ALA ALA LEU GLU TRP LEU ALA ASP TYR ASP ILE ASN GLN SEQRES 24 B 404 ALA GLU SER TRP SER ARG SER LEU ALA THR LEU ALA GLU SEQRES 25 B 404 ASP ALA LEU ALA LYS ARG PRO GLY PHE ARG SER PHE ARG SEQRES 26 B 404 CYS GLN ASP SER SER LEU LEU ALA PHE ASP PHE ALA GLY SEQRES 27 B 404 VAL HIS HIS SER ASP MET VAL THR LEU LEU ALA GLU TYR SEQRES 28 B 404 GLY ILE ALA LEU ARG ALA GLY GLN HIS CYS ALA GLN PRO SEQRES 29 B 404 LEU LEU ALA GLU LEU GLY VAL THR GLY THR LEU ARG ALA SEQRES 30 B 404 SER PHE ALA PRO TYR ASN THR LYS SER ASP VAL ASP ALA SEQRES 31 B 404 LEU VAL ASN ALA VAL ASP ARG ALA LEU GLU LEU LEU VAL SEQRES 32 B 404 ASP SEQRES 1 C 150 GLY SER HIS MET THR ASN PRO GLN PHE ALA GLY HIS PRO SEQRES 2 C 150 PHE GLY THR THR VAL THR ALA GLU THR LEU ARG ASN THR SEQRES 3 C 150 PHE ALA PRO LEU THR GLN TRP GLU ASP LYS TYR ARG GLN SEQRES 4 C 150 LEU ILE MET LEU GLY LYS GLN LEU PRO ALA LEU PRO ASP SEQRES 5 C 150 GLU LEU LYS ALA GLN ALA LYS GLU ILE ALA GLY CYS GLU SEQRES 6 C 150 ASN ARG VAL TRP LEU GLY TYR THR VAL ALA GLU ASN GLY SEQRES 7 C 150 LYS MET HIS PHE PHE GLY ASP SER GLU GLY ARG ILE VAL SEQRES 8 C 150 ARG GLY LEU LEU ALA VAL LEU LEU THR ALA VAL GLU GLY SEQRES 9 C 150 LYS THR ALA ALA GLU LEU GLN ALA GLN SER PRO LEU ALA SEQRES 10 C 150 LEU PHE ASP GLU LEU GLY LEU ARG ALA GLN LEU SER ALA SEQRES 11 C 150 SER ARG SER GLN GLY LEU ASN ALA LEU SER GLU ALA ILE SEQRES 12 C 150 ILE ALA ALA ALA LYS GLN VAL SEQRES 1 D 150 GLY SER HIS MET THR ASN PRO GLN PHE ALA GLY HIS PRO SEQRES 2 D 150 PHE GLY THR THR VAL THR ALA GLU THR LEU ARG ASN THR SEQRES 3 D 150 PHE ALA PRO LEU THR GLN TRP GLU ASP LYS TYR ARG GLN SEQRES 4 D 150 LEU ILE MET LEU GLY LYS GLN LEU PRO ALA LEU PRO ASP SEQRES 5 D 150 GLU LEU LYS ALA GLN ALA LYS GLU ILE ALA GLY CYS GLU SEQRES 6 D 150 ASN ARG VAL TRP LEU GLY TYR THR VAL ALA GLU ASN GLY SEQRES 7 D 150 LYS MET HIS PHE PHE GLY ASP SER GLU GLY ARG ILE VAL SEQRES 8 D 150 ARG GLY LEU LEU ALA VAL LEU LEU THR ALA VAL GLU GLY SEQRES 9 D 150 LYS THR ALA ALA GLU LEU GLN ALA GLN SER PRO LEU ALA SEQRES 10 D 150 LEU PHE ASP GLU LEU GLY LEU ARG ALA GLN LEU SER ALA SEQRES 11 D 150 SER ARG SER GLN GLY LEU ASN ALA LEU SER GLU ALA ILE SEQRES 12 D 150 ILE ALA ALA ALA LYS GLN VAL HET PLP A 500 15 HET PLP B 500 15 HETNAM PLP PYRIDOXAL-5'-PHOSPHATE HETSYN PLP VITAMIN B6 PHOSPHATE FORMUL 5 PLP 2(C8 H10 N O6 P) FORMUL 7 HOH *685(H2 O) HELIX 1 1 ASN A 5 ALA A 11 1 7 HELIX 2 2 GLN A 12 PRO A 14 5 3 HELIX 3 3 ALA A 15 GLY A 20 1 6 HELIX 4 4 PRO A 32 SER A 44 1 13 HELIX 5 5 ALA A 56 ALA A 67 1 12 HELIX 6 6 ALA A 67 ASN A 77 1 11 HELIX 7 7 ASP A 80 LYS A 82 5 3 HELIX 8 8 GLY A 89 TYR A 101 1 13 HELIX 9 9 HIS A 119 ASN A 122 5 4 HELIX 10 10 LEU A 123 GLY A 134 1 12 HELIX 11 11 ASP A 149 ASP A 151 5 3 HELIX 12 12 LEU A 152 ILE A 157 1 6 HELIX 13 13 ASP A 178 ALA A 189 1 12 HELIX 14 14 GLN A 199 PHE A 204 1 6 HELIX 15 15 HIS A 221 LEU A 223 5 3 HELIX 16 16 LYS A 235 MET A 242 1 8 HELIX 17 17 PRO A 266 GLU A 270 5 5 HELIX 18 18 ASN A 275 ALA A 290 1 16 HELIX 19 19 ASP A 293 ALA A 313 1 21 HELIX 20 20 HIS A 337 TYR A 348 1 12 HELIX 21 21 ALA A 359 GLY A 367 1 9 HELIX 22 22 THR A 381 VAL A 400 1 20 HELIX 23 23 ASN B 5 GLN B 12 1 8 HELIX 24 24 PHE B 13 GLN B 17 5 5 HELIX 25 25 PRO B 32 LEU B 45 1 14 HELIX 26 26 GLN B 54 ASN B 77 1 24 HELIX 27 27 ASP B 80 LYS B 82 5 3 HELIX 28 28 GLY B 89 TYR B 101 1 13 HELIX 29 29 ALA B 102 LEU B 106 5 5 HELIX 30 30 HIS B 119 ASN B 122 5 4 HELIX 31 31 LEU B 123 GLY B 134 1 12 HELIX 32 32 ASP B 149 ASP B 151 5 3 HELIX 33 33 LEU B 152 ILE B 157 1 6 HELIX 34 34 ASP B 178 ALA B 189 1 12 HELIX 35 35 GLN B 199 PHE B 204 1 6 HELIX 36 36 ASP B 207 ASP B 212 1 6 HELIX 37 37 HIS B 221 LEU B 223 5 3 HELIX 38 38 LYS B 235 MET B 242 1 8 HELIX 39 39 PRO B 266 GLU B 270 5 5 HELIX 40 40 ASN B 275 ALA B 290 1 16 HELIX 41 41 ASP B 293 ALA B 313 1 21 HELIX 42 42 HIS B 337 TYR B 348 1 12 HELIX 43 43 ALA B 359 GLY B 367 1 9 HELIX 44 44 THR B 381 VAL B 400 1 20 HELIX 45 45 THR C 16 ALA C 25 1 10 HELIX 46 46 GLN C 29 LYS C 42 1 14 HELIX 47 47 PRO C 48 ALA C 53 1 6 HELIX 48 48 GLY C 85 GLU C 100 1 16 HELIX 49 49 THR C 103 GLN C 110 1 8 HELIX 50 50 LEU C 113 LEU C 119 1 7 HELIX 51 51 LEU C 125 ARG C 129 5 5 HELIX 52 52 SER C 130 VAL C 147 1 18 HELIX 53 53 THR D 16 ALA D 25 1 10 HELIX 54 54 GLN D 29 LYS D 42 1 14 HELIX 55 55 PRO D 48 ALA D 53 1 6 HELIX 56 56 GLY D 85 GLU D 100 1 16 HELIX 57 57 THR D 103 GLN D 110 1 8 HELIX 58 58 LEU D 113 LEU D 119 1 7 HELIX 59 59 LEU D 121 SER D 128 1 8 HELIX 60 60 ARG D 129 GLN D 131 5 3 HELIX 61 61 GLY D 132 LYS D 145 1 14 SHEET 1 A 2 VAL A 21 TYR A 22 0 SHEET 2 A 2 ILE A 350 ALA A 351 1 O ALA A 351 N VAL A 21 SHEET 1 B 7 ILE A 84 THR A 87 0 SHEET 2 B 7 GLY A 230 GLY A 234 -1 O LEU A 232 N VAL A 85 SHEET 3 B 7 PHE A 215 SER A 219 -1 N TYR A 216 O TYR A 233 SHEET 4 B 7 VAL A 192 ASP A 196 1 N VAL A 195 O PHE A 215 SHEET 5 B 7 SER A 161 GLY A 167 1 N LEU A 164 O MET A 194 SHEET 6 B 7 GLU A 111 SER A 115 1 N ILE A 113 O ALA A 165 SHEET 7 B 7 LYS A 136 LEU A 140 1 O LYS A 136 N ILE A 112 SHEET 1 C 2 VAL A 252 SER A 256 0 SHEET 2 C 2 GLY A 259 THR A 262 -1 O THR A 261 N HIS A 253 SHEET 1 D 4 PHE A 318 SER A 320 0 SHEET 2 D 4 LEU A 328 PHE A 333 -1 O ASP A 332 N ARG A 319 SHEET 3 D 4 THR A 371 SER A 375 -1 O ALA A 374 N LEU A 329 SHEET 4 D 4 ARG A 353 GLY A 355 -1 N ARG A 353 O ARG A 373 SHEET 1 E 2 VAL B 21 TYR B 22 0 SHEET 2 E 2 ILE B 350 ALA B 351 1 O ALA B 351 N VAL B 21 SHEET 1 F 7 ILE B 84 THR B 87 0 SHEET 2 F 7 GLY B 230 GLY B 234 -1 O GLY B 230 N THR B 87 SHEET 3 F 7 PHE B 215 SER B 219 -1 N TYR B 216 O TYR B 233 SHEET 4 F 7 VAL B 192 ASP B 196 1 N VAL B 195 O PHE B 215 SHEET 5 F 7 SER B 161 GLY B 167 1 N LEU B 164 O MET B 194 SHEET 6 F 7 GLU B 111 SER B 115 1 N GLU B 111 O ARG B 162 SHEET 7 F 7 LYS B 136 LEU B 140 1 O VAL B 138 N ILE B 112 SHEET 1 G 2 VAL B 252 SER B 256 0 SHEET 2 G 2 GLY B 259 THR B 262 -1 O THR B 261 N HIS B 253 SHEET 1 H 4 PHE B 318 SER B 320 0 SHEET 2 H 4 LEU B 328 PHE B 333 -1 O ASP B 332 N ARG B 319 SHEET 3 H 4 THR B 371 SER B 375 -1 O ALA B 374 N LEU B 329 SHEET 4 H 4 ARG B 353 GLY B 355 -1 N ARG B 353 O ARG B 373 SHEET 1 I 3 LYS C 56 GLU C 57 0 SHEET 2 I 3 VAL C 65 VAL C 71 -1 O LEU C 67 N LYS C 56 SHEET 3 I 3 MET C 77 SER C 83 -1 O HIS C 78 N THR C 70 SHEET 1 J 3 LYS D 56 ALA D 59 0 SHEET 2 J 3 ARG D 64 VAL D 71 -1 O VAL D 65 N ILE D 58 SHEET 3 J 3 MET D 77 SER D 83 -1 O PHE D 80 N GLY D 68 LINK NZ LYS A 222 C4A PLP A 500 1555 1555 1.59 LINK NZ LYS B 222 C4A PLP B 500 1555 1555 1.53 CISPEP 1 ALA A 265 PRO A 266 0 2.29 CISPEP 2 ALA B 265 PRO B 266 0 -0.12 SITE 1 AC1 14 THR A 90 THR A 91 HIS A 119 ASN A 171 SITE 2 AC1 14 ASP A 196 ALA A 198 GLN A 199 SER A 219 SITE 3 AC1 14 HIS A 221 LYS A 222 HOH A 602 HOH A 640 SITE 4 AC1 14 HOH A 781 THR B 273 SITE 1 AC2 16 GLY A 272 THR A 273 THR B 90 THR B 91 SITE 2 AC2 16 HIS B 119 ALA B 121 ASN B 171 ASP B 196 SITE 3 AC2 16 ALA B 198 GLN B 199 SER B 219 HIS B 221 SITE 4 AC2 16 LYS B 222 HOH B 640 HOH B 654 HOH B 757 CRYST1 77.135 76.871 89.361 90.00 104.48 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012964 0.000000 0.003349 0.00000 SCALE2 0.000000 0.013009 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011558 0.00000