data_4LXL # _entry.id 4LXL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4LXL pdb_00004lxl 10.2210/pdb4lxl/pdb RCSB RCSB081212 ? ? WWPDB D_1000081212 ? ? # _pdbx_database_status.entry_id 4LXL _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-07-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wang, W.-C.' 1 'Chu, C.-H.' 2 'Chen, C.-C.' 3 # _citation.id primary _citation.title 'Crystal structure of JMJD2B complexed with pyridine-2,4-dicarboxylic acid and H3K9me3' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Wang, W.-C.' 1 ? primary 'Chu, C.-H.' 2 ? primary 'Chen, C.-C.' 3 ? # _cell.entry_id 4LXL _cell.length_a 54.364 _cell.length_b 78.475 _cell.length_c 83.893 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4LXL _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lysine-specific demethylase 4B' 42419.105 1 1.14.11.- ? 'Catalytic domain, UNP RESIDUES 1-348' ? 2 polymer syn 'H3 peptide' 849.012 1 ? ? ? ? 3 non-polymer syn 'PYRIDINE-2,4-DICARBOXYLIC ACID' 167.119 1 ? ? ? ? 4 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 5 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? 6 water nat water 18.015 262 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'JmjC domain-containing histone demethylation protein 3B, Jumonji domain-containing protein 2B' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MGSSHHHHHHSSGLVPRGSHMGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGS LYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRL ERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPT ; ;MGSSHHHHHHSSGLVPRGSHMGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTY DDIDDVVIPAPIQQVVTGQSGLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGS LYDDDVAQWNIGSLRTILDMVERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRL ERLAIGFFPGSSQGCDAFLRHKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDY GKVATQCTCRKDMVKISMDVFVRILQPERYELWKQGKDLTVLDHTRPT ; A ? 2 'polypeptide(L)' no yes 'AR(M3L)STGGK' ARKSTGGK D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLY n 1 3 SER n 1 4 SER n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 HIS n 1 9 HIS n 1 10 HIS n 1 11 SER n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 VAL n 1 16 PRO n 1 17 ARG n 1 18 GLY n 1 19 SER n 1 20 HIS n 1 21 MET n 1 22 GLY n 1 23 SER n 1 24 GLU n 1 25 ASP n 1 26 HIS n 1 27 GLY n 1 28 ALA n 1 29 GLN n 1 30 ASN n 1 31 PRO n 1 32 SER n 1 33 CYS n 1 34 LYS n 1 35 ILE n 1 36 MET n 1 37 THR n 1 38 PHE n 1 39 ARG n 1 40 PRO n 1 41 THR n 1 42 MET n 1 43 GLU n 1 44 GLU n 1 45 PHE n 1 46 LYS n 1 47 ASP n 1 48 PHE n 1 49 ASN n 1 50 LYS n 1 51 TYR n 1 52 VAL n 1 53 ALA n 1 54 TYR n 1 55 ILE n 1 56 GLU n 1 57 SER n 1 58 GLN n 1 59 GLY n 1 60 ALA n 1 61 HIS n 1 62 ARG n 1 63 ALA n 1 64 GLY n 1 65 LEU n 1 66 ALA n 1 67 LYS n 1 68 ILE n 1 69 ILE n 1 70 PRO n 1 71 PRO n 1 72 LYS n 1 73 GLU n 1 74 TRP n 1 75 LYS n 1 76 PRO n 1 77 ARG n 1 78 GLN n 1 79 THR n 1 80 TYR n 1 81 ASP n 1 82 ASP n 1 83 ILE n 1 84 ASP n 1 85 ASP n 1 86 VAL n 1 87 VAL n 1 88 ILE n 1 89 PRO n 1 90 ALA n 1 91 PRO n 1 92 ILE n 1 93 GLN n 1 94 GLN n 1 95 VAL n 1 96 VAL n 1 97 THR n 1 98 GLY n 1 99 GLN n 1 100 SER n 1 101 GLY n 1 102 LEU n 1 103 PHE n 1 104 THR n 1 105 GLN n 1 106 TYR n 1 107 ASN n 1 108 ILE n 1 109 GLN n 1 110 LYS n 1 111 LYS n 1 112 ALA n 1 113 MET n 1 114 THR n 1 115 VAL n 1 116 GLY n 1 117 GLU n 1 118 TYR n 1 119 ARG n 1 120 ARG n 1 121 LEU n 1 122 ALA n 1 123 ASN n 1 124 SER n 1 125 GLU n 1 126 LYS n 1 127 TYR n 1 128 CYS n 1 129 THR n 1 130 PRO n 1 131 ARG n 1 132 HIS n 1 133 GLN n 1 134 ASP n 1 135 PHE n 1 136 ASP n 1 137 ASP n 1 138 LEU n 1 139 GLU n 1 140 ARG n 1 141 LYS n 1 142 TYR n 1 143 TRP n 1 144 LYS n 1 145 ASN n 1 146 LEU n 1 147 THR n 1 148 PHE n 1 149 VAL n 1 150 SER n 1 151 PRO n 1 152 ILE n 1 153 TYR n 1 154 GLY n 1 155 ALA n 1 156 ASP n 1 157 ILE n 1 158 SER n 1 159 GLY n 1 160 SER n 1 161 LEU n 1 162 TYR n 1 163 ASP n 1 164 ASP n 1 165 ASP n 1 166 VAL n 1 167 ALA n 1 168 GLN n 1 169 TRP n 1 170 ASN n 1 171 ILE n 1 172 GLY n 1 173 SER n 1 174 LEU n 1 175 ARG n 1 176 THR n 1 177 ILE n 1 178 LEU n 1 179 ASP n 1 180 MET n 1 181 VAL n 1 182 GLU n 1 183 ARG n 1 184 GLU n 1 185 CYS n 1 186 GLY n 1 187 THR n 1 188 ILE n 1 189 ILE n 1 190 GLU n 1 191 GLY n 1 192 VAL n 1 193 ASN n 1 194 THR n 1 195 PRO n 1 196 TYR n 1 197 LEU n 1 198 TYR n 1 199 PHE n 1 200 GLY n 1 201 MET n 1 202 TRP n 1 203 LYS n 1 204 THR n 1 205 THR n 1 206 PHE n 1 207 ALA n 1 208 TRP n 1 209 HIS n 1 210 THR n 1 211 GLU n 1 212 ASP n 1 213 MET n 1 214 ASP n 1 215 LEU n 1 216 TYR n 1 217 SER n 1 218 ILE n 1 219 ASN n 1 220 TYR n 1 221 LEU n 1 222 HIS n 1 223 PHE n 1 224 GLY n 1 225 GLU n 1 226 PRO n 1 227 LYS n 1 228 SER n 1 229 TRP n 1 230 TYR n 1 231 ALA n 1 232 ILE n 1 233 PRO n 1 234 PRO n 1 235 GLU n 1 236 HIS n 1 237 GLY n 1 238 LYS n 1 239 ARG n 1 240 LEU n 1 241 GLU n 1 242 ARG n 1 243 LEU n 1 244 ALA n 1 245 ILE n 1 246 GLY n 1 247 PHE n 1 248 PHE n 1 249 PRO n 1 250 GLY n 1 251 SER n 1 252 SER n 1 253 GLN n 1 254 GLY n 1 255 CYS n 1 256 ASP n 1 257 ALA n 1 258 PHE n 1 259 LEU n 1 260 ARG n 1 261 HIS n 1 262 LYS n 1 263 MET n 1 264 THR n 1 265 LEU n 1 266 ILE n 1 267 SER n 1 268 PRO n 1 269 ILE n 1 270 ILE n 1 271 LEU n 1 272 LYS n 1 273 LYS n 1 274 TYR n 1 275 GLY n 1 276 ILE n 1 277 PRO n 1 278 PHE n 1 279 SER n 1 280 ARG n 1 281 ILE n 1 282 THR n 1 283 GLN n 1 284 GLU n 1 285 ALA n 1 286 GLY n 1 287 GLU n 1 288 PHE n 1 289 MET n 1 290 ILE n 1 291 THR n 1 292 PHE n 1 293 PRO n 1 294 TYR n 1 295 GLY n 1 296 TYR n 1 297 HIS n 1 298 ALA n 1 299 GLY n 1 300 PHE n 1 301 ASN n 1 302 HIS n 1 303 GLY n 1 304 PHE n 1 305 ASN n 1 306 CYS n 1 307 ALA n 1 308 GLU n 1 309 SER n 1 310 THR n 1 311 ASN n 1 312 PHE n 1 313 ALA n 1 314 THR n 1 315 LEU n 1 316 ARG n 1 317 TRP n 1 318 ILE n 1 319 ASP n 1 320 TYR n 1 321 GLY n 1 322 LYS n 1 323 VAL n 1 324 ALA n 1 325 THR n 1 326 GLN n 1 327 CYS n 1 328 THR n 1 329 CYS n 1 330 ARG n 1 331 LYS n 1 332 ASP n 1 333 MET n 1 334 VAL n 1 335 LYS n 1 336 ILE n 1 337 SER n 1 338 MET n 1 339 ASP n 1 340 VAL n 1 341 PHE n 1 342 VAL n 1 343 ARG n 1 344 ILE n 1 345 LEU n 1 346 GLN n 1 347 PRO n 1 348 GLU n 1 349 ARG n 1 350 TYR n 1 351 GLU n 1 352 LEU n 1 353 TRP n 1 354 LYS n 1 355 GLN n 1 356 GLY n 1 357 LYS n 1 358 ASP n 1 359 LEU n 1 360 THR n 1 361 VAL n 1 362 LEU n 1 363 ASP n 1 364 HIS n 1 365 THR n 1 366 ARG n 1 367 PRO n 1 368 THR n 2 1 ALA n 2 2 ARG n 2 3 M3L n 2 4 SER n 2 5 THR n 2 6 GLY n 2 7 GLY n 2 8 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene KDM4B _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific human _pdbx_entity_src_syn.organism_common_name 'Homo sapiens' _pdbx_entity_src_syn.ncbi_taxonomy_id 9606 _pdbx_entity_src_syn.details 'This sequence occurs naturally in humans.' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP KDM4B_HUMAN O94953 1 ;MGSEDHGAQNPSCKIMTFRPTMEEFKDFNKYVAYIESQGAHRAGLAKIIPPKEWKPRQTYDDIDDVVIPAPIQQVVTGQS GLFTQYNIQKKAMTVGEYRRLANSEKYCTPRHQDFDDLERKYWKNLTFVSPIYGADISGSLYDDDVAQWNIGSLRTILDM VERECGTIIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAIPPEHGKRLERLAIGFFPGSSQGCDAFLR HKMTLISPIILKKYGIPFSRITQEAGEFMITFPYGYHAGFNHGFNCAESTNFATLRWIDYGKVATQCTCRKDMVKISMDV FVRILQPERYELWKQGKDLTVLDHTRPT ; 1 ? 2 PDB 4LXL 4LXL 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4LXL A 21 ? 368 ? O94953 1 ? 348 ? 1 348 2 2 4LXL D 1 ? 8 ? 4LXL 7 ? 14 ? 7 14 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4LXL MET A 1 ? UNP O94953 ? ? 'expression tag' -19 1 1 4LXL GLY A 2 ? UNP O94953 ? ? 'expression tag' -18 2 1 4LXL SER A 3 ? UNP O94953 ? ? 'expression tag' -17 3 1 4LXL SER A 4 ? UNP O94953 ? ? 'expression tag' -16 4 1 4LXL HIS A 5 ? UNP O94953 ? ? 'expression tag' -15 5 1 4LXL HIS A 6 ? UNP O94953 ? ? 'expression tag' -14 6 1 4LXL HIS A 7 ? UNP O94953 ? ? 'expression tag' -13 7 1 4LXL HIS A 8 ? UNP O94953 ? ? 'expression tag' -12 8 1 4LXL HIS A 9 ? UNP O94953 ? ? 'expression tag' -11 9 1 4LXL HIS A 10 ? UNP O94953 ? ? 'expression tag' -10 10 1 4LXL SER A 11 ? UNP O94953 ? ? 'expression tag' -9 11 1 4LXL SER A 12 ? UNP O94953 ? ? 'expression tag' -8 12 1 4LXL GLY A 13 ? UNP O94953 ? ? 'expression tag' -7 13 1 4LXL LEU A 14 ? UNP O94953 ? ? 'expression tag' -6 14 1 4LXL VAL A 15 ? UNP O94953 ? ? 'expression tag' -5 15 1 4LXL PRO A 16 ? UNP O94953 ? ? 'expression tag' -4 16 1 4LXL ARG A 17 ? UNP O94953 ? ? 'expression tag' -3 17 1 4LXL GLY A 18 ? UNP O94953 ? ? 'expression tag' -2 18 1 4LXL SER A 19 ? UNP O94953 ? ? 'expression tag' -1 19 1 4LXL HIS A 20 ? UNP O94953 ? ? 'expression tag' 0 20 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 M3L 'L-peptide linking' n N-TRIMETHYLLYSINE ? 'C9 H21 N2 O2 1' 189.275 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PD2 non-polymer . 'PYRIDINE-2,4-DICARBOXYLIC ACID' ? 'C7 H5 N O4' 167.119 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.crystals_number 1 _exptl.entry_id 4LXL _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.10 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 41.42 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '24% PEG8000, 0.2M magnesium acetate, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4r' _diffrn_detector.pdbx_collection_date 2013-05-22 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator SI _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SPRING-8 BEAMLINE BL12B2' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 _diffrn_source.pdbx_synchrotron_site SPring-8 _diffrn_source.pdbx_synchrotron_beamline BL12B2 # _reflns.entry_id 4LXL _reflns.observed_criterion_sigma_F 1.0 _reflns.observed_criterion_sigma_I 1.0 _reflns.d_resolution_high 1.87 _reflns.d_resolution_low 30 _reflns.number_all 30463 _reflns.number_obs 30173 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.043 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 12.5 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.87 _reflns_shell.d_res_low 1.94 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all 98.0 _reflns_shell.Rmerge_I_obs 0.368 _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 11.2 _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4LXL _refine.ls_d_res_high 1.8700 _refine.ls_d_res_low 28.6700 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs ? _refine.ls_number_reflns_obs 28644 _refine.ls_number_reflns_all 30173 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES: REFINED INDIVIDUALLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1789 _refine.ls_R_factor_R_work 0.1765 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2224 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1529 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 26.5967 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.5200 _refine.aniso_B[2][2] -1.4700 _refine.aniso_B[3][3] 0.9500 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9590 _refine.correlation_coeff_Fo_to_Fc_free 0.9410 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1440 _refine.pdbx_overall_ESU_R_Free 0.1380 _refine.overall_SU_ML 0.0880 _refine.overall_SU_B 2.9050 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 2YBS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 94.170 _refine.B_iso_min 10.570 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2749 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 14 _refine_hist.number_atoms_solvent 262 _refine_hist.number_atoms_total 3025 _refine_hist.d_res_high 1.8700 _refine_hist.d_res_low 28.6700 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' r_bond_refined_d 2839 0.013 0.019 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3841 1.375 1.948 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 335 7.220 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 136 37.029 23.382 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 478 18.352 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 18 18.093 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 394 0.123 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2187 0.014 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1346 3.603 3.171 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1679 4.723 5.309 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1493 5.120 3.608 ? ? # _refine_ls_shell.d_res_high 1.8700 _refine_ls_shell.d_res_low 1.9180 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.3100 _refine_ls_shell.number_reflns_R_work 2044 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2250 _refine_ls_shell.R_factor_R_free 0.3100 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 114 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2158 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4LXL _struct.title 'Crystal structure of JMJD2B complexed with pyridine-2,4-dicarboxylic acid and H3K9me3' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4LXL _struct_keywords.pdbx_keywords OXIDOREDUCTASE/PEPTIDE _struct_keywords.text 'JmjC domain, Demethylation, Histone, Methylation, Nucleus, OXIDOREDUCTASE-PEPTIDE complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 6 ? G N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 41 ? LYS A 46 ? THR A 21 LYS A 26 1 ? 6 HELX_P HELX_P2 2 ASP A 47 ? GLN A 58 ? ASP A 27 GLN A 38 1 ? 12 HELX_P HELX_P3 3 GLY A 59 ? ALA A 63 ? GLY A 39 ALA A 43 5 ? 5 HELX_P HELX_P4 4 ASP A 82 ? ASP A 85 ? ASP A 62 ASP A 65 5 ? 4 HELX_P HELX_P5 5 VAL A 115 ? SER A 124 ? VAL A 95 SER A 104 1 ? 10 HELX_P HELX_P6 6 ASP A 134 ? LEU A 146 ? ASP A 114 LEU A 126 1 ? 13 HELX_P HELX_P7 7 THR A 176 ? LEU A 178 ? THR A 156 LEU A 158 5 ? 3 HELX_P HELX_P8 8 ASP A 179 ? GLY A 186 ? ASP A 159 GLY A 166 1 ? 8 HELX_P HELX_P9 9 GLU A 211 ? LEU A 215 ? GLU A 191 LEU A 195 5 ? 5 HELX_P HELX_P10 10 PRO A 233 ? GLU A 235 ? PRO A 213 GLU A 215 5 ? 3 HELX_P HELX_P11 11 HIS A 236 ? PHE A 248 ? HIS A 216 PHE A 228 1 ? 13 HELX_P HELX_P12 12 PHE A 248 ? CYS A 255 ? PHE A 228 CYS A 235 1 ? 8 HELX_P HELX_P13 13 ALA A 257 ? LYS A 262 ? ALA A 237 LYS A 242 5 ? 6 HELX_P HELX_P14 14 SER A 267 ? TYR A 274 ? SER A 247 TYR A 254 1 ? 8 HELX_P HELX_P15 15 THR A 314 ? ARG A 316 ? THR A 294 ARG A 296 5 ? 3 HELX_P HELX_P16 16 TRP A 317 ? ALA A 324 ? TRP A 297 ALA A 304 1 ? 8 HELX_P HELX_P17 17 MET A 338 ? GLN A 346 ? MET A 318 GLN A 326 1 ? 9 HELX_P HELX_P18 18 GLN A 346 ? GLN A 355 ? GLN A 326 GLN A 335 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? B ARG 2 C ? ? ? 1_555 B M3L 3 N ? ? D ARG 8 D M3L 9 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale2 covale both ? B M3L 3 C ? ? ? 1_555 B SER 4 N ? ? D M3L 9 D SER 10 1_555 ? ? ? ? ? ? ? 1.329 ? ? metalc1 metalc ? ? A HIS 209 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 189 A NI 402 1_555 ? ? ? ? ? ? ? 2.154 ? ? metalc2 metalc ? ? A GLU 211 OE2 ? ? ? 1_555 D NI . NI ? ? A GLU 191 A NI 402 1_555 ? ? ? ? ? ? ? 2.082 ? ? metalc3 metalc ? ? A CYS 255 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 235 A ZN 403 1_555 ? ? ? ? ? ? ? 2.234 ? ? metalc4 metalc ? ? A HIS 261 NE2 ? ? ? 1_555 E ZN . ZN ? ? A HIS 241 A ZN 403 1_555 ? ? ? ? ? ? ? 2.149 ? ? metalc5 metalc ? ? A HIS 297 NE2 ? ? ? 1_555 D NI . NI ? ? A HIS 277 A NI 402 1_555 ? ? ? ? ? ? ? 2.146 ? ? metalc6 metalc ? ? A CYS 327 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 307 A ZN 403 1_555 ? ? ? ? ? ? ? 2.262 ? ? metalc7 metalc ? ? A CYS 329 SG ? ? ? 1_555 E ZN . ZN ? ? A CYS 309 A ZN 403 1_555 ? ? ? ? ? ? ? 2.400 ? ? metalc8 metalc ? ? C PD2 . N1 ? ? ? 1_555 D NI . NI ? ? A PD2 401 A NI 402 1_555 ? ? ? ? ? ? ? 2.124 ? ? metalc9 metalc ? ? C PD2 . O22 ? ? ? 1_555 D NI . NI ? ? A PD2 401 A NI 402 1_555 ? ? ? ? ? ? ? 2.127 ? ? metalc10 metalc ? ? D NI . NI ? ? ? 1_555 F HOH . O ? ? A NI 402 A HOH 752 1_555 ? ? ? ? ? ? ? 2.182 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 10 ? B ? 2 ? C ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 37 ? PHE A 38 ? THR A 17 PHE A 18 A 2 LEU A 65 ? ILE A 68 ? LEU A 45 ILE A 48 A 3 PHE A 288 ? THR A 291 ? PHE A 268 THR A 271 A 4 TYR A 216 ? GLY A 224 ? TYR A 196 GLY A 204 A 5 ASN A 305 ? PHE A 312 ? ASN A 285 PHE A 292 A 6 TYR A 196 ? GLY A 200 ? TYR A 176 GLY A 180 A 7 ILE A 152 ? SER A 158 ? ILE A 132 SER A 138 A 8 ILE A 92 ? GLN A 99 ? ILE A 72 GLN A 79 A 9 LEU A 102 ? GLN A 109 ? LEU A 82 GLN A 89 A 10 THR A 264 ? ILE A 266 ? THR A 244 ILE A 246 B 1 VAL A 87 ? ILE A 88 ? VAL A 67 ILE A 68 B 2 MET A 113 ? THR A 114 ? MET A 93 THR A 94 C 1 THR A 205 ? HIS A 209 ? THR A 185 HIS A 189 C 2 TYR A 296 ? ASN A 301 ? TYR A 276 ASN A 281 C 3 LYS A 227 ? ILE A 232 ? LYS A 207 ILE A 212 C 4 SER A 279 ? GLN A 283 ? SER A 259 GLN A 263 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 38 ? N PHE A 18 O LYS A 67 ? O LYS A 47 A 2 3 N ALA A 66 ? N ALA A 46 O ILE A 290 ? O ILE A 270 A 3 4 O MET A 289 ? O MET A 269 N ASN A 219 ? N ASN A 199 A 4 5 N TYR A 220 ? N TYR A 200 O GLU A 308 ? O GLU A 288 A 5 6 O ALA A 307 ? O ALA A 287 N TYR A 198 ? N TYR A 178 A 6 7 O PHE A 199 ? O PHE A 179 N GLY A 154 ? N GLY A 134 A 7 8 O TYR A 153 ? O TYR A 133 N ILE A 92 ? N ILE A 72 A 8 9 N VAL A 95 ? N VAL A 75 O TYR A 106 ? O TYR A 86 A 9 10 N PHE A 103 ? N PHE A 83 O LEU A 265 ? O LEU A 245 B 1 2 N ILE A 88 ? N ILE A 68 O MET A 113 ? O MET A 93 C 1 2 N PHE A 206 ? N PHE A 186 O GLY A 299 ? O GLY A 279 C 2 3 O ALA A 298 ? O ALA A 278 N TYR A 230 ? N TYR A 210 C 3 4 N LYS A 227 ? N LYS A 207 O GLN A 283 ? O GLN A 263 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A PD2 401 ? 16 'BINDING SITE FOR RESIDUE PD2 A 401' AC2 Software A NI 402 ? 5 'BINDING SITE FOR RESIDUE NI A 402' AC3 Software A ZN 403 ? 4 'BINDING SITE FOR RESIDUE ZN A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 16 TYR A 153 ? TYR A 133 . ? 1_555 ? 2 AC1 16 TYR A 198 ? TYR A 178 . ? 1_555 ? 3 AC1 16 PHE A 206 ? PHE A 186 . ? 1_555 ? 4 AC1 16 HIS A 209 ? HIS A 189 . ? 1_555 ? 5 AC1 16 GLU A 211 ? GLU A 191 . ? 1_555 ? 6 AC1 16 LYS A 227 ? LYS A 207 . ? 1_555 ? 7 AC1 16 TRP A 229 ? TRP A 209 . ? 1_555 ? 8 AC1 16 LYS A 262 ? LYS A 242 . ? 1_555 ? 9 AC1 16 HIS A 297 ? HIS A 277 . ? 1_555 ? 10 AC1 16 NI D . ? NI A 402 . ? 1_555 ? 11 AC1 16 HOH F . ? HOH A 510 . ? 1_555 ? 12 AC1 16 HOH F . ? HOH A 511 . ? 1_555 ? 13 AC1 16 HOH F . ? HOH A 514 . ? 1_555 ? 14 AC1 16 HOH F . ? HOH A 752 . ? 1_555 ? 15 AC1 16 M3L B 3 ? M3L D 9 . ? 1_555 ? 16 AC1 16 HOH G . ? HOH D 101 . ? 1_555 ? 17 AC2 5 HIS A 209 ? HIS A 189 . ? 1_555 ? 18 AC2 5 GLU A 211 ? GLU A 191 . ? 1_555 ? 19 AC2 5 HIS A 297 ? HIS A 277 . ? 1_555 ? 20 AC2 5 PD2 C . ? PD2 A 401 . ? 1_555 ? 21 AC2 5 HOH F . ? HOH A 752 . ? 1_555 ? 22 AC3 4 CYS A 255 ? CYS A 235 . ? 1_555 ? 23 AC3 4 HIS A 261 ? HIS A 241 . ? 1_555 ? 24 AC3 4 CYS A 327 ? CYS A 307 . ? 1_555 ? 25 AC3 4 CYS A 329 ? CYS A 309 . ? 1_555 ? # _atom_sites.entry_id 4LXL _atom_sites.fract_transf_matrix[1][1] 0.018395 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012743 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011920 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NI O S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -19 ? ? ? A . n A 1 2 GLY 2 -18 ? ? ? A . n A 1 3 SER 3 -17 ? ? ? A . n A 1 4 SER 4 -16 ? ? ? A . n A 1 5 HIS 5 -15 ? ? ? A . n A 1 6 HIS 6 -14 ? ? ? A . n A 1 7 HIS 7 -13 ? ? ? A . n A 1 8 HIS 8 -12 ? ? ? A . n A 1 9 HIS 9 -11 ? ? ? A . n A 1 10 HIS 10 -10 ? ? ? A . n A 1 11 SER 11 -9 ? ? ? A . n A 1 12 SER 12 -8 ? ? ? A . n A 1 13 GLY 13 -7 ? ? ? A . n A 1 14 LEU 14 -6 ? ? ? A . n A 1 15 VAL 15 -5 ? ? ? A . n A 1 16 PRO 16 -4 ? ? ? A . n A 1 17 ARG 17 -3 ? ? ? A . n A 1 18 GLY 18 -2 ? ? ? A . n A 1 19 SER 19 -1 ? ? ? A . n A 1 20 HIS 20 0 ? ? ? A . n A 1 21 MET 21 1 ? ? ? A . n A 1 22 GLY 22 2 ? ? ? A . n A 1 23 SER 23 3 ? ? ? A . n A 1 24 GLU 24 4 ? ? ? A . n A 1 25 ASP 25 5 ? ? ? A . n A 1 26 HIS 26 6 ? ? ? A . n A 1 27 GLY 27 7 ? ? ? A . n A 1 28 ALA 28 8 ? ? ? A . n A 1 29 GLN 29 9 9 GLN GLN A . n A 1 30 ASN 30 10 10 ASN ASN A . n A 1 31 PRO 31 11 11 PRO PRO A . n A 1 32 SER 32 12 12 SER SER A . n A 1 33 CYS 33 13 13 CYS CYS A . n A 1 34 LYS 34 14 14 LYS LYS A . n A 1 35 ILE 35 15 15 ILE ILE A . n A 1 36 MET 36 16 16 MET MET A . n A 1 37 THR 37 17 17 THR THR A . n A 1 38 PHE 38 18 18 PHE PHE A . n A 1 39 ARG 39 19 19 ARG ARG A . n A 1 40 PRO 40 20 20 PRO PRO A . n A 1 41 THR 41 21 21 THR THR A . n A 1 42 MET 42 22 22 MET MET A . n A 1 43 GLU 43 23 23 GLU GLU A . n A 1 44 GLU 44 24 24 GLU GLU A . n A 1 45 PHE 45 25 25 PHE PHE A . n A 1 46 LYS 46 26 26 LYS LYS A . n A 1 47 ASP 47 27 27 ASP ASP A . n A 1 48 PHE 48 28 28 PHE PHE A . n A 1 49 ASN 49 29 29 ASN ASN A . n A 1 50 LYS 50 30 30 LYS LYS A . n A 1 51 TYR 51 31 31 TYR TYR A . n A 1 52 VAL 52 32 32 VAL VAL A . n A 1 53 ALA 53 33 33 ALA ALA A . n A 1 54 TYR 54 34 34 TYR TYR A . n A 1 55 ILE 55 35 35 ILE ILE A . n A 1 56 GLU 56 36 36 GLU GLU A . n A 1 57 SER 57 37 37 SER SER A . n A 1 58 GLN 58 38 38 GLN GLN A . n A 1 59 GLY 59 39 39 GLY GLY A . n A 1 60 ALA 60 40 40 ALA ALA A . n A 1 61 HIS 61 41 41 HIS HIS A . n A 1 62 ARG 62 42 42 ARG ARG A . n A 1 63 ALA 63 43 43 ALA ALA A . n A 1 64 GLY 64 44 44 GLY GLY A . n A 1 65 LEU 65 45 45 LEU LEU A . n A 1 66 ALA 66 46 46 ALA ALA A . n A 1 67 LYS 67 47 47 LYS LYS A . n A 1 68 ILE 68 48 48 ILE ILE A . n A 1 69 ILE 69 49 49 ILE ILE A . n A 1 70 PRO 70 50 50 PRO PRO A . n A 1 71 PRO 71 51 51 PRO PRO A . n A 1 72 LYS 72 52 52 LYS LYS A . n A 1 73 GLU 73 53 53 GLU GLU A . n A 1 74 TRP 74 54 54 TRP TRP A . n A 1 75 LYS 75 55 55 LYS LYS A . n A 1 76 PRO 76 56 56 PRO PRO A . n A 1 77 ARG 77 57 57 ARG ARG A . n A 1 78 GLN 78 58 58 GLN GLN A . n A 1 79 THR 79 59 59 THR THR A . n A 1 80 TYR 80 60 60 TYR TYR A . n A 1 81 ASP 81 61 61 ASP ASP A . n A 1 82 ASP 82 62 62 ASP ASP A . n A 1 83 ILE 83 63 63 ILE ILE A . n A 1 84 ASP 84 64 64 ASP ASP A . n A 1 85 ASP 85 65 65 ASP ASP A . n A 1 86 VAL 86 66 66 VAL VAL A . n A 1 87 VAL 87 67 67 VAL VAL A . n A 1 88 ILE 88 68 68 ILE ILE A . n A 1 89 PRO 89 69 69 PRO PRO A . n A 1 90 ALA 90 70 70 ALA ALA A . n A 1 91 PRO 91 71 71 PRO PRO A . n A 1 92 ILE 92 72 72 ILE ILE A . n A 1 93 GLN 93 73 73 GLN GLN A . n A 1 94 GLN 94 74 74 GLN GLN A . n A 1 95 VAL 95 75 75 VAL VAL A . n A 1 96 VAL 96 76 76 VAL VAL A . n A 1 97 THR 97 77 77 THR THR A . n A 1 98 GLY 98 78 78 GLY GLY A . n A 1 99 GLN 99 79 79 GLN GLN A . n A 1 100 SER 100 80 80 SER SER A . n A 1 101 GLY 101 81 81 GLY GLY A . n A 1 102 LEU 102 82 82 LEU LEU A . n A 1 103 PHE 103 83 83 PHE PHE A . n A 1 104 THR 104 84 84 THR THR A . n A 1 105 GLN 105 85 85 GLN GLN A . n A 1 106 TYR 106 86 86 TYR TYR A . n A 1 107 ASN 107 87 87 ASN ASN A . n A 1 108 ILE 108 88 88 ILE ILE A . n A 1 109 GLN 109 89 89 GLN GLN A . n A 1 110 LYS 110 90 90 LYS LYS A . n A 1 111 LYS 111 91 91 LYS LYS A . n A 1 112 ALA 112 92 92 ALA ALA A . n A 1 113 MET 113 93 93 MET MET A . n A 1 114 THR 114 94 94 THR THR A . n A 1 115 VAL 115 95 95 VAL VAL A . n A 1 116 GLY 116 96 96 GLY GLY A . n A 1 117 GLU 117 97 97 GLU GLU A . n A 1 118 TYR 118 98 98 TYR TYR A . n A 1 119 ARG 119 99 99 ARG ARG A . n A 1 120 ARG 120 100 100 ARG ARG A . n A 1 121 LEU 121 101 101 LEU LEU A . n A 1 122 ALA 122 102 102 ALA ALA A . n A 1 123 ASN 123 103 103 ASN ASN A . n A 1 124 SER 124 104 104 SER SER A . n A 1 125 GLU 125 105 105 GLU GLU A . n A 1 126 LYS 126 106 106 LYS LYS A . n A 1 127 TYR 127 107 107 TYR TYR A . n A 1 128 CYS 128 108 108 CYS CYS A . n A 1 129 THR 129 109 109 THR THR A . n A 1 130 PRO 130 110 110 PRO PRO A . n A 1 131 ARG 131 111 111 ARG ARG A . n A 1 132 HIS 132 112 112 HIS HIS A . n A 1 133 GLN 133 113 113 GLN GLN A . n A 1 134 ASP 134 114 114 ASP ASP A . n A 1 135 PHE 135 115 115 PHE PHE A . n A 1 136 ASP 136 116 116 ASP ASP A . n A 1 137 ASP 137 117 117 ASP ASP A . n A 1 138 LEU 138 118 118 LEU LEU A . n A 1 139 GLU 139 119 119 GLU GLU A . n A 1 140 ARG 140 120 120 ARG ARG A . n A 1 141 LYS 141 121 121 LYS LYS A . n A 1 142 TYR 142 122 122 TYR TYR A . n A 1 143 TRP 143 123 123 TRP TRP A . n A 1 144 LYS 144 124 124 LYS LYS A . n A 1 145 ASN 145 125 125 ASN ASN A . n A 1 146 LEU 146 126 126 LEU LEU A . n A 1 147 THR 147 127 127 THR THR A . n A 1 148 PHE 148 128 128 PHE PHE A . n A 1 149 VAL 149 129 129 VAL VAL A . n A 1 150 SER 150 130 130 SER SER A . n A 1 151 PRO 151 131 131 PRO PRO A . n A 1 152 ILE 152 132 132 ILE ILE A . n A 1 153 TYR 153 133 133 TYR TYR A . n A 1 154 GLY 154 134 134 GLY GLY A . n A 1 155 ALA 155 135 135 ALA ALA A . n A 1 156 ASP 156 136 136 ASP ASP A . n A 1 157 ILE 157 137 137 ILE ILE A . n A 1 158 SER 158 138 138 SER SER A . n A 1 159 GLY 159 139 139 GLY GLY A . n A 1 160 SER 160 140 140 SER SER A . n A 1 161 LEU 161 141 141 LEU LEU A . n A 1 162 TYR 162 142 142 TYR TYR A . n A 1 163 ASP 163 143 143 ASP ASP A . n A 1 164 ASP 164 144 144 ASP ASP A . n A 1 165 ASP 165 145 145 ASP ASP A . n A 1 166 VAL 166 146 146 VAL VAL A . n A 1 167 ALA 167 147 147 ALA ALA A . n A 1 168 GLN 168 148 148 GLN GLN A . n A 1 169 TRP 169 149 149 TRP TRP A . n A 1 170 ASN 170 150 150 ASN ASN A . n A 1 171 ILE 171 151 151 ILE ILE A . n A 1 172 GLY 172 152 152 GLY GLY A . n A 1 173 SER 173 153 153 SER SER A . n A 1 174 LEU 174 154 154 LEU LEU A . n A 1 175 ARG 175 155 155 ARG ARG A . n A 1 176 THR 176 156 156 THR THR A . n A 1 177 ILE 177 157 157 ILE ILE A . n A 1 178 LEU 178 158 158 LEU LEU A . n A 1 179 ASP 179 159 159 ASP ASP A . n A 1 180 MET 180 160 160 MET MET A . n A 1 181 VAL 181 161 161 VAL VAL A . n A 1 182 GLU 182 162 162 GLU GLU A . n A 1 183 ARG 183 163 163 ARG ARG A . n A 1 184 GLU 184 164 164 GLU GLU A . n A 1 185 CYS 185 165 165 CYS CYS A . n A 1 186 GLY 186 166 166 GLY GLY A . n A 1 187 THR 187 167 167 THR THR A . n A 1 188 ILE 188 168 168 ILE ILE A . n A 1 189 ILE 189 169 169 ILE ILE A . n A 1 190 GLU 190 170 170 GLU GLU A . n A 1 191 GLY 191 171 171 GLY GLY A . n A 1 192 VAL 192 172 172 VAL VAL A . n A 1 193 ASN 193 173 173 ASN ASN A . n A 1 194 THR 194 174 174 THR THR A . n A 1 195 PRO 195 175 175 PRO PRO A . n A 1 196 TYR 196 176 176 TYR TYR A . n A 1 197 LEU 197 177 177 LEU LEU A . n A 1 198 TYR 198 178 178 TYR TYR A . n A 1 199 PHE 199 179 179 PHE PHE A . n A 1 200 GLY 200 180 180 GLY GLY A . n A 1 201 MET 201 181 181 MET MET A . n A 1 202 TRP 202 182 182 TRP TRP A . n A 1 203 LYS 203 183 183 LYS LYS A . n A 1 204 THR 204 184 184 THR THR A . n A 1 205 THR 205 185 185 THR THR A . n A 1 206 PHE 206 186 186 PHE PHE A . n A 1 207 ALA 207 187 187 ALA ALA A . n A 1 208 TRP 208 188 188 TRP TRP A . n A 1 209 HIS 209 189 189 HIS HIS A . n A 1 210 THR 210 190 190 THR THR A . n A 1 211 GLU 211 191 191 GLU GLU A . n A 1 212 ASP 212 192 192 ASP ASP A . n A 1 213 MET 213 193 193 MET MET A . n A 1 214 ASP 214 194 194 ASP ASP A . n A 1 215 LEU 215 195 195 LEU LEU A . n A 1 216 TYR 216 196 196 TYR TYR A . n A 1 217 SER 217 197 197 SER SER A . n A 1 218 ILE 218 198 198 ILE ILE A . n A 1 219 ASN 219 199 199 ASN ASN A . n A 1 220 TYR 220 200 200 TYR TYR A . n A 1 221 LEU 221 201 201 LEU LEU A . n A 1 222 HIS 222 202 202 HIS HIS A . n A 1 223 PHE 223 203 203 PHE PHE A . n A 1 224 GLY 224 204 204 GLY GLY A . n A 1 225 GLU 225 205 205 GLU GLU A . n A 1 226 PRO 226 206 206 PRO PRO A . n A 1 227 LYS 227 207 207 LYS LYS A . n A 1 228 SER 228 208 208 SER SER A . n A 1 229 TRP 229 209 209 TRP TRP A . n A 1 230 TYR 230 210 210 TYR TYR A . n A 1 231 ALA 231 211 211 ALA ALA A . n A 1 232 ILE 232 212 212 ILE ILE A . n A 1 233 PRO 233 213 213 PRO PRO A . n A 1 234 PRO 234 214 214 PRO PRO A . n A 1 235 GLU 235 215 215 GLU GLU A . n A 1 236 HIS 236 216 216 HIS HIS A . n A 1 237 GLY 237 217 217 GLY GLY A . n A 1 238 LYS 238 218 218 LYS LYS A . n A 1 239 ARG 239 219 219 ARG ARG A . n A 1 240 LEU 240 220 220 LEU LEU A . n A 1 241 GLU 241 221 221 GLU GLU A . n A 1 242 ARG 242 222 222 ARG ARG A . n A 1 243 LEU 243 223 223 LEU LEU A . n A 1 244 ALA 244 224 224 ALA ALA A . n A 1 245 ILE 245 225 225 ILE ILE A . n A 1 246 GLY 246 226 226 GLY GLY A . n A 1 247 PHE 247 227 227 PHE PHE A . n A 1 248 PHE 248 228 228 PHE PHE A . n A 1 249 PRO 249 229 229 PRO PRO A . n A 1 250 GLY 250 230 230 GLY GLY A . n A 1 251 SER 251 231 231 SER SER A . n A 1 252 SER 252 232 232 SER SER A . n A 1 253 GLN 253 233 233 GLN GLN A . n A 1 254 GLY 254 234 234 GLY GLY A . n A 1 255 CYS 255 235 235 CYS CYS A . n A 1 256 ASP 256 236 236 ASP ASP A . n A 1 257 ALA 257 237 237 ALA ALA A . n A 1 258 PHE 258 238 238 PHE PHE A . n A 1 259 LEU 259 239 239 LEU LEU A . n A 1 260 ARG 260 240 240 ARG ARG A . n A 1 261 HIS 261 241 241 HIS HIS A . n A 1 262 LYS 262 242 242 LYS LYS A . n A 1 263 MET 263 243 243 MET MET A . n A 1 264 THR 264 244 244 THR THR A . n A 1 265 LEU 265 245 245 LEU LEU A . n A 1 266 ILE 266 246 246 ILE ILE A . n A 1 267 SER 267 247 247 SER SER A . n A 1 268 PRO 268 248 248 PRO PRO A . n A 1 269 ILE 269 249 249 ILE ILE A . n A 1 270 ILE 270 250 250 ILE ILE A . n A 1 271 LEU 271 251 251 LEU LEU A . n A 1 272 LYS 272 252 252 LYS LYS A . n A 1 273 LYS 273 253 253 LYS LYS A . n A 1 274 TYR 274 254 254 TYR TYR A . n A 1 275 GLY 275 255 255 GLY GLY A . n A 1 276 ILE 276 256 256 ILE ILE A . n A 1 277 PRO 277 257 257 PRO PRO A . n A 1 278 PHE 278 258 258 PHE PHE A . n A 1 279 SER 279 259 259 SER SER A . n A 1 280 ARG 280 260 260 ARG ARG A . n A 1 281 ILE 281 261 261 ILE ILE A . n A 1 282 THR 282 262 262 THR THR A . n A 1 283 GLN 283 263 263 GLN GLN A . n A 1 284 GLU 284 264 264 GLU GLU A . n A 1 285 ALA 285 265 265 ALA ALA A . n A 1 286 GLY 286 266 266 GLY GLY A . n A 1 287 GLU 287 267 267 GLU GLU A . n A 1 288 PHE 288 268 268 PHE PHE A . n A 1 289 MET 289 269 269 MET MET A . n A 1 290 ILE 290 270 270 ILE ILE A . n A 1 291 THR 291 271 271 THR THR A . n A 1 292 PHE 292 272 272 PHE PHE A . n A 1 293 PRO 293 273 273 PRO PRO A . n A 1 294 TYR 294 274 274 TYR TYR A . n A 1 295 GLY 295 275 275 GLY GLY A . n A 1 296 TYR 296 276 276 TYR TYR A . n A 1 297 HIS 297 277 277 HIS HIS A . n A 1 298 ALA 298 278 278 ALA ALA A . n A 1 299 GLY 299 279 279 GLY GLY A . n A 1 300 PHE 300 280 280 PHE PHE A . n A 1 301 ASN 301 281 281 ASN ASN A . n A 1 302 HIS 302 282 282 HIS HIS A . n A 1 303 GLY 303 283 283 GLY GLY A . n A 1 304 PHE 304 284 284 PHE PHE A . n A 1 305 ASN 305 285 285 ASN ASN A . n A 1 306 CYS 306 286 286 CYS CYS A . n A 1 307 ALA 307 287 287 ALA ALA A . n A 1 308 GLU 308 288 288 GLU GLU A . n A 1 309 SER 309 289 289 SER SER A . n A 1 310 THR 310 290 290 THR THR A . n A 1 311 ASN 311 291 291 ASN ASN A . n A 1 312 PHE 312 292 292 PHE PHE A . n A 1 313 ALA 313 293 293 ALA ALA A . n A 1 314 THR 314 294 294 THR THR A . n A 1 315 LEU 315 295 295 LEU LEU A . n A 1 316 ARG 316 296 296 ARG ARG A . n A 1 317 TRP 317 297 297 TRP TRP A . n A 1 318 ILE 318 298 298 ILE ILE A . n A 1 319 ASP 319 299 299 ASP ASP A . n A 1 320 TYR 320 300 300 TYR TYR A . n A 1 321 GLY 321 301 301 GLY GLY A . n A 1 322 LYS 322 302 302 LYS LYS A . n A 1 323 VAL 323 303 303 VAL VAL A . n A 1 324 ALA 324 304 304 ALA ALA A . n A 1 325 THR 325 305 305 THR THR A . n A 1 326 GLN 326 306 306 GLN GLN A . n A 1 327 CYS 327 307 307 CYS CYS A . n A 1 328 THR 328 308 308 THR THR A . n A 1 329 CYS 329 309 309 CYS CYS A . n A 1 330 ARG 330 310 310 ARG ARG A . n A 1 331 LYS 331 311 311 LYS LYS A . n A 1 332 ASP 332 312 312 ASP ASP A . n A 1 333 MET 333 313 313 MET MET A . n A 1 334 VAL 334 314 314 VAL VAL A . n A 1 335 LYS 335 315 315 LYS LYS A . n A 1 336 ILE 336 316 316 ILE ILE A . n A 1 337 SER 337 317 317 SER SER A . n A 1 338 MET 338 318 318 MET MET A . n A 1 339 ASP 339 319 319 ASP ASP A . n A 1 340 VAL 340 320 320 VAL VAL A . n A 1 341 PHE 341 321 321 PHE PHE A . n A 1 342 VAL 342 322 322 VAL VAL A . n A 1 343 ARG 343 323 323 ARG ARG A . n A 1 344 ILE 344 324 324 ILE ILE A . n A 1 345 LEU 345 325 325 LEU LEU A . n A 1 346 GLN 346 326 326 GLN GLN A . n A 1 347 PRO 347 327 327 PRO PRO A . n A 1 348 GLU 348 328 328 GLU GLU A . n A 1 349 ARG 349 329 329 ARG ARG A . n A 1 350 TYR 350 330 330 TYR TYR A . n A 1 351 GLU 351 331 331 GLU GLU A . n A 1 352 LEU 352 332 332 LEU LEU A . n A 1 353 TRP 353 333 333 TRP TRP A . n A 1 354 LYS 354 334 334 LYS LYS A . n A 1 355 GLN 355 335 335 GLN GLN A . n A 1 356 GLY 356 336 336 GLY GLY A . n A 1 357 LYS 357 337 337 LYS LYS A . n A 1 358 ASP 358 338 ? ? ? A . n A 1 359 LEU 359 339 ? ? ? A . n A 1 360 THR 360 340 ? ? ? A . n A 1 361 VAL 361 341 ? ? ? A . n A 1 362 LEU 362 342 ? ? ? A . n A 1 363 ASP 363 343 ? ? ? A . n A 1 364 HIS 364 344 ? ? ? A . n A 1 365 THR 365 345 ? ? ? A . n A 1 366 ARG 366 346 ? ? ? A . n A 1 367 PRO 367 347 ? ? ? A . n A 1 368 THR 368 348 ? ? ? A . n B 2 1 ALA 1 7 7 ALA ALA D . n B 2 2 ARG 2 8 8 ARG ARG D . n B 2 3 M3L 3 9 9 M3L M3L D . n B 2 4 SER 4 10 10 SER SER D . n B 2 5 THR 5 11 11 THR THR D . n B 2 6 GLY 6 12 12 GLY GLY D . n B 2 7 GLY 7 13 13 GLY GLY D . n B 2 8 LYS 8 14 14 LYS LYS D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 PD2 1 401 1 PD2 PD2 A . D 4 NI 1 402 1 NI NI A . E 5 ZN 1 403 1 ZN ZN A . F 6 HOH 1 501 1 HOH HOH A . F 6 HOH 2 502 2 HOH HOH A . F 6 HOH 3 503 3 HOH HOH A . F 6 HOH 4 504 4 HOH HOH A . F 6 HOH 5 505 5 HOH HOH A . F 6 HOH 6 506 6 HOH HOH A . F 6 HOH 7 507 7 HOH HOH A . F 6 HOH 8 508 8 HOH HOH A . F 6 HOH 9 509 9 HOH HOH A . F 6 HOH 10 510 10 HOH HOH A . F 6 HOH 11 511 12 HOH HOH A . F 6 HOH 12 512 13 HOH HOH A . F 6 HOH 13 513 14 HOH HOH A . F 6 HOH 14 514 15 HOH HOH A . F 6 HOH 15 515 16 HOH HOH A . F 6 HOH 16 516 17 HOH HOH A . F 6 HOH 17 517 18 HOH HOH A . F 6 HOH 18 518 20 HOH HOH A . F 6 HOH 19 519 21 HOH HOH A . F 6 HOH 20 520 22 HOH HOH A . F 6 HOH 21 521 23 HOH HOH A . F 6 HOH 22 522 24 HOH HOH A . F 6 HOH 23 523 25 HOH HOH A . F 6 HOH 24 524 26 HOH HOH A . F 6 HOH 25 525 27 HOH HOH A . F 6 HOH 26 526 28 HOH HOH A . F 6 HOH 27 527 29 HOH HOH A . F 6 HOH 28 528 30 HOH HOH A . F 6 HOH 29 529 31 HOH HOH A . F 6 HOH 30 530 32 HOH HOH A . F 6 HOH 31 531 33 HOH HOH A . F 6 HOH 32 532 34 HOH HOH A . F 6 HOH 33 533 35 HOH HOH A . F 6 HOH 34 534 36 HOH HOH A . F 6 HOH 35 535 37 HOH HOH A . F 6 HOH 36 536 38 HOH HOH A . F 6 HOH 37 537 39 HOH HOH A . F 6 HOH 38 538 40 HOH HOH A . F 6 HOH 39 539 41 HOH HOH A . F 6 HOH 40 540 42 HOH HOH A . F 6 HOH 41 541 43 HOH HOH A . F 6 HOH 42 542 44 HOH HOH A . F 6 HOH 43 543 45 HOH HOH A . F 6 HOH 44 544 46 HOH HOH A . F 6 HOH 45 545 47 HOH HOH A . F 6 HOH 46 546 48 HOH HOH A . F 6 HOH 47 547 49 HOH HOH A . F 6 HOH 48 548 50 HOH HOH A . F 6 HOH 49 549 51 HOH HOH A . F 6 HOH 50 550 52 HOH HOH A . F 6 HOH 51 551 53 HOH HOH A . F 6 HOH 52 552 54 HOH HOH A . F 6 HOH 53 553 56 HOH HOH A . F 6 HOH 54 554 57 HOH HOH A . F 6 HOH 55 555 58 HOH HOH A . F 6 HOH 56 556 59 HOH HOH A . F 6 HOH 57 557 60 HOH HOH A . F 6 HOH 58 558 61 HOH HOH A . F 6 HOH 59 559 62 HOH HOH A . F 6 HOH 60 560 63 HOH HOH A . F 6 HOH 61 561 64 HOH HOH A . F 6 HOH 62 562 65 HOH HOH A . F 6 HOH 63 563 66 HOH HOH A . F 6 HOH 64 564 67 HOH HOH A . F 6 HOH 65 565 68 HOH HOH A . F 6 HOH 66 566 69 HOH HOH A . F 6 HOH 67 567 70 HOH HOH A . F 6 HOH 68 568 71 HOH HOH A . F 6 HOH 69 569 72 HOH HOH A . F 6 HOH 70 570 73 HOH HOH A . F 6 HOH 71 571 74 HOH HOH A . F 6 HOH 72 572 75 HOH HOH A . F 6 HOH 73 573 76 HOH HOH A . F 6 HOH 74 574 77 HOH HOH A . F 6 HOH 75 575 78 HOH HOH A . F 6 HOH 76 576 79 HOH HOH A . F 6 HOH 77 577 80 HOH HOH A . F 6 HOH 78 578 82 HOH HOH A . F 6 HOH 79 579 83 HOH HOH A . F 6 HOH 80 580 84 HOH HOH A . F 6 HOH 81 581 85 HOH HOH A . F 6 HOH 82 582 86 HOH HOH A . F 6 HOH 83 583 87 HOH HOH A . F 6 HOH 84 584 88 HOH HOH A . F 6 HOH 85 585 89 HOH HOH A . F 6 HOH 86 586 90 HOH HOH A . F 6 HOH 87 587 91 HOH HOH A . F 6 HOH 88 588 92 HOH HOH A . F 6 HOH 89 589 93 HOH HOH A . F 6 HOH 90 590 94 HOH HOH A . F 6 HOH 91 591 95 HOH HOH A . F 6 HOH 92 592 96 HOH HOH A . F 6 HOH 93 593 97 HOH HOH A . F 6 HOH 94 594 98 HOH HOH A . F 6 HOH 95 595 99 HOH HOH A . F 6 HOH 96 596 100 HOH HOH A . F 6 HOH 97 597 101 HOH HOH A . F 6 HOH 98 598 102 HOH HOH A . F 6 HOH 99 599 103 HOH HOH A . F 6 HOH 100 600 104 HOH HOH A . F 6 HOH 101 601 105 HOH HOH A . F 6 HOH 102 602 106 HOH HOH A . F 6 HOH 103 603 108 HOH HOH A . F 6 HOH 104 604 110 HOH HOH A . F 6 HOH 105 605 112 HOH HOH A . F 6 HOH 106 606 113 HOH HOH A . F 6 HOH 107 607 114 HOH HOH A . F 6 HOH 108 608 115 HOH HOH A . F 6 HOH 109 609 116 HOH HOH A . F 6 HOH 110 610 117 HOH HOH A . F 6 HOH 111 611 119 HOH HOH A . F 6 HOH 112 612 121 HOH HOH A . F 6 HOH 113 613 122 HOH HOH A . F 6 HOH 114 614 123 HOH HOH A . F 6 HOH 115 615 124 HOH HOH A . F 6 HOH 116 616 125 HOH HOH A . F 6 HOH 117 617 126 HOH HOH A . F 6 HOH 118 618 127 HOH HOH A . F 6 HOH 119 619 129 HOH HOH A . F 6 HOH 120 620 130 HOH HOH A . F 6 HOH 121 621 131 HOH HOH A . F 6 HOH 122 622 132 HOH HOH A . F 6 HOH 123 623 133 HOH HOH A . F 6 HOH 124 624 134 HOH HOH A . F 6 HOH 125 625 135 HOH HOH A . F 6 HOH 126 626 136 HOH HOH A . F 6 HOH 127 627 137 HOH HOH A . F 6 HOH 128 628 139 HOH HOH A . F 6 HOH 129 629 140 HOH HOH A . F 6 HOH 130 630 141 HOH HOH A . F 6 HOH 131 631 142 HOH HOH A . F 6 HOH 132 632 143 HOH HOH A . F 6 HOH 133 633 144 HOH HOH A . F 6 HOH 134 634 145 HOH HOH A . F 6 HOH 135 635 146 HOH HOH A . F 6 HOH 136 636 147 HOH HOH A . F 6 HOH 137 637 148 HOH HOH A . F 6 HOH 138 638 149 HOH HOH A . F 6 HOH 139 639 150 HOH HOH A . F 6 HOH 140 640 152 HOH HOH A . F 6 HOH 141 641 153 HOH HOH A . F 6 HOH 142 642 154 HOH HOH A . F 6 HOH 143 643 155 HOH HOH A . F 6 HOH 144 644 156 HOH HOH A . F 6 HOH 145 645 157 HOH HOH A . F 6 HOH 146 646 158 HOH HOH A . F 6 HOH 147 647 159 HOH HOH A . F 6 HOH 148 648 160 HOH HOH A . F 6 HOH 149 649 161 HOH HOH A . F 6 HOH 150 650 162 HOH HOH A . F 6 HOH 151 651 165 HOH HOH A . F 6 HOH 152 652 166 HOH HOH A . F 6 HOH 153 653 167 HOH HOH A . F 6 HOH 154 654 168 HOH HOH A . F 6 HOH 155 655 169 HOH HOH A . F 6 HOH 156 656 170 HOH HOH A . F 6 HOH 157 657 171 HOH HOH A . F 6 HOH 158 658 172 HOH HOH A . F 6 HOH 159 659 173 HOH HOH A . F 6 HOH 160 660 174 HOH HOH A . F 6 HOH 161 661 175 HOH HOH A . F 6 HOH 162 662 176 HOH HOH A . F 6 HOH 163 663 177 HOH HOH A . F 6 HOH 164 664 178 HOH HOH A . F 6 HOH 165 665 179 HOH HOH A . F 6 HOH 166 666 180 HOH HOH A . F 6 HOH 167 667 181 HOH HOH A . F 6 HOH 168 668 182 HOH HOH A . F 6 HOH 169 669 183 HOH HOH A . F 6 HOH 170 670 184 HOH HOH A . F 6 HOH 171 671 186 HOH HOH A . F 6 HOH 172 672 188 HOH HOH A . F 6 HOH 173 673 189 HOH HOH A . F 6 HOH 174 674 190 HOH HOH A . F 6 HOH 175 675 191 HOH HOH A . F 6 HOH 176 676 192 HOH HOH A . F 6 HOH 177 677 193 HOH HOH A . F 6 HOH 178 678 194 HOH HOH A . F 6 HOH 179 679 195 HOH HOH A . F 6 HOH 180 680 196 HOH HOH A . F 6 HOH 181 681 197 HOH HOH A . F 6 HOH 182 682 198 HOH HOH A . F 6 HOH 183 683 199 HOH HOH A . F 6 HOH 184 684 200 HOH HOH A . F 6 HOH 185 685 201 HOH HOH A . F 6 HOH 186 686 202 HOH HOH A . F 6 HOH 187 687 203 HOH HOH A . F 6 HOH 188 688 204 HOH HOH A . F 6 HOH 189 689 205 HOH HOH A . F 6 HOH 190 690 206 HOH HOH A . F 6 HOH 191 691 207 HOH HOH A . F 6 HOH 192 692 208 HOH HOH A . F 6 HOH 193 693 209 HOH HOH A . F 6 HOH 194 694 210 HOH HOH A . F 6 HOH 195 695 211 HOH HOH A . F 6 HOH 196 696 212 HOH HOH A . F 6 HOH 197 697 213 HOH HOH A . F 6 HOH 198 698 214 HOH HOH A . F 6 HOH 199 699 215 HOH HOH A . F 6 HOH 200 700 216 HOH HOH A . F 6 HOH 201 701 217 HOH HOH A . F 6 HOH 202 702 218 HOH HOH A . F 6 HOH 203 703 219 HOH HOH A . F 6 HOH 204 704 220 HOH HOH A . F 6 HOH 205 705 221 HOH HOH A . F 6 HOH 206 706 222 HOH HOH A . F 6 HOH 207 707 223 HOH HOH A . F 6 HOH 208 708 224 HOH HOH A . F 6 HOH 209 709 225 HOH HOH A . F 6 HOH 210 710 226 HOH HOH A . F 6 HOH 211 711 227 HOH HOH A . F 6 HOH 212 712 229 HOH HOH A . F 6 HOH 213 713 230 HOH HOH A . F 6 HOH 214 714 231 HOH HOH A . F 6 HOH 215 715 232 HOH HOH A . F 6 HOH 216 716 233 HOH HOH A . F 6 HOH 217 717 234 HOH HOH A . F 6 HOH 218 718 235 HOH HOH A . F 6 HOH 219 719 237 HOH HOH A . F 6 HOH 220 720 238 HOH HOH A . F 6 HOH 221 721 239 HOH HOH A . F 6 HOH 222 722 240 HOH HOH A . F 6 HOH 223 723 241 HOH HOH A . F 6 HOH 224 724 242 HOH HOH A . F 6 HOH 225 725 243 HOH HOH A . F 6 HOH 226 726 244 HOH HOH A . F 6 HOH 227 727 245 HOH HOH A . F 6 HOH 228 728 249 HOH HOH A . F 6 HOH 229 729 250 HOH HOH A . F 6 HOH 230 730 251 HOH HOH A . F 6 HOH 231 731 252 HOH HOH A . F 6 HOH 232 732 253 HOH HOH A . F 6 HOH 233 733 254 HOH HOH A . F 6 HOH 234 734 255 HOH HOH A . F 6 HOH 235 735 257 HOH HOH A . F 6 HOH 236 736 259 HOH HOH A . F 6 HOH 237 737 260 HOH HOH A . F 6 HOH 238 738 261 HOH HOH A . F 6 HOH 239 739 262 HOH HOH A . F 6 HOH 240 740 263 HOH HOH A . F 6 HOH 241 741 264 HOH HOH A . F 6 HOH 242 742 267 HOH HOH A . F 6 HOH 243 743 269 HOH HOH A . F 6 HOH 244 744 270 HOH HOH A . F 6 HOH 245 745 272 HOH HOH A . F 6 HOH 246 746 274 HOH HOH A . F 6 HOH 247 747 275 HOH HOH A . F 6 HOH 248 748 276 HOH HOH A . F 6 HOH 249 749 281 HOH HOH A . F 6 HOH 250 750 282 HOH HOH A . F 6 HOH 251 751 284 HOH HOH A . F 6 HOH 252 752 285 HOH HOH A . G 6 HOH 1 101 11 HOH HOH D . G 6 HOH 2 102 19 HOH HOH D . G 6 HOH 3 103 55 HOH HOH D . G 6 HOH 4 104 81 HOH HOH D . G 6 HOH 5 105 107 HOH HOH D . G 6 HOH 6 106 128 HOH HOH D . G 6 HOH 7 107 163 HOH HOH D . G 6 HOH 8 108 164 HOH HOH D . G 6 HOH 9 109 236 HOH HOH D . G 6 HOH 10 110 247 HOH HOH D . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id B _pdbx_struct_mod_residue.label_comp_id M3L _pdbx_struct_mod_residue.label_seq_id 3 _pdbx_struct_mod_residue.auth_asym_id D _pdbx_struct_mod_residue.auth_comp_id M3L _pdbx_struct_mod_residue.auth_seq_id 9 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id LYS _pdbx_struct_mod_residue.details N-TRIMETHYLLYSINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1810 ? 1 MORE -10 ? 1 'SSA (A^2)' 15610 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 209 ? A HIS 189 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 OE2 ? A GLU 211 ? A GLU 191 ? 1_555 98.4 ? 2 NE2 ? A HIS 209 ? A HIS 189 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 NE2 ? A HIS 297 ? A HIS 277 ? 1_555 86.4 ? 3 OE2 ? A GLU 211 ? A GLU 191 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 NE2 ? A HIS 297 ? A HIS 277 ? 1_555 87.7 ? 4 NE2 ? A HIS 209 ? A HIS 189 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 N1 ? C PD2 . ? A PD2 401 ? 1_555 97.9 ? 5 OE2 ? A GLU 211 ? A GLU 191 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 N1 ? C PD2 . ? A PD2 401 ? 1_555 162.0 ? 6 NE2 ? A HIS 297 ? A HIS 277 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 N1 ? C PD2 . ? A PD2 401 ? 1_555 100.9 ? 7 NE2 ? A HIS 209 ? A HIS 189 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O22 ? C PD2 . ? A PD2 401 ? 1_555 82.4 ? 8 OE2 ? A GLU 211 ? A GLU 191 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O22 ? C PD2 . ? A PD2 401 ? 1_555 96.8 ? 9 NE2 ? A HIS 297 ? A HIS 277 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O22 ? C PD2 . ? A PD2 401 ? 1_555 168.5 ? 10 N1 ? C PD2 . ? A PD2 401 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O22 ? C PD2 . ? A PD2 401 ? 1_555 77.8 ? 11 NE2 ? A HIS 209 ? A HIS 189 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O ? F HOH . ? A HOH 752 ? 1_555 176.5 ? 12 OE2 ? A GLU 211 ? A GLU 191 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O ? F HOH . ? A HOH 752 ? 1_555 85.0 ? 13 NE2 ? A HIS 297 ? A HIS 277 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O ? F HOH . ? A HOH 752 ? 1_555 93.0 ? 14 N1 ? C PD2 . ? A PD2 401 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O ? F HOH . ? A HOH 752 ? 1_555 78.8 ? 15 O22 ? C PD2 . ? A PD2 401 ? 1_555 NI ? D NI . ? A NI 402 ? 1_555 O ? F HOH . ? A HOH 752 ? 1_555 97.9 ? 16 SG ? A CYS 255 ? A CYS 235 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 NE2 ? A HIS 261 ? A HIS 241 ? 1_555 110.3 ? 17 SG ? A CYS 255 ? A CYS 235 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 SG ? A CYS 327 ? A CYS 307 ? 1_555 114.6 ? 18 NE2 ? A HIS 261 ? A HIS 241 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 SG ? A CYS 327 ? A CYS 307 ? 1_555 111.0 ? 19 SG ? A CYS 255 ? A CYS 235 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 SG ? A CYS 329 ? A CYS 309 ? 1_555 116.6 ? 20 NE2 ? A HIS 261 ? A HIS 241 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 SG ? A CYS 329 ? A CYS 309 ? 1_555 92.2 ? 21 SG ? A CYS 327 ? A CYS 307 ? 1_555 ZN ? E ZN . ? A ZN 403 ? 1_555 SG ? A CYS 329 ? A CYS 309 ? 1_555 110.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-07-30 2 'Structure model' 1 1 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' pdbx_struct_conn_angle 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 4 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.value' 16 2 'Structure model' '_struct_conn.pdbx_dist_value' 17 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 18 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 2 'Structure model' '_struct_ref_seq_dif.details' 30 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC 5.7.0032 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 HKL-2000 . ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 6 AMoRE . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 70 ? ? -151.19 62.43 2 1 PHE A 128 ? ? -83.04 -96.61 3 1 SER A 153 ? ? -156.52 70.77 4 1 ARG A 155 ? ? 61.68 68.08 5 1 LYS A 183 ? ? 82.81 -6.04 6 1 ALA A 237 ? ? -141.88 44.90 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -19 ? A MET 1 2 1 Y 1 A GLY -18 ? A GLY 2 3 1 Y 1 A SER -17 ? A SER 3 4 1 Y 1 A SER -16 ? A SER 4 5 1 Y 1 A HIS -15 ? A HIS 5 6 1 Y 1 A HIS -14 ? A HIS 6 7 1 Y 1 A HIS -13 ? A HIS 7 8 1 Y 1 A HIS -12 ? A HIS 8 9 1 Y 1 A HIS -11 ? A HIS 9 10 1 Y 1 A HIS -10 ? A HIS 10 11 1 Y 1 A SER -9 ? A SER 11 12 1 Y 1 A SER -8 ? A SER 12 13 1 Y 1 A GLY -7 ? A GLY 13 14 1 Y 1 A LEU -6 ? A LEU 14 15 1 Y 1 A VAL -5 ? A VAL 15 16 1 Y 1 A PRO -4 ? A PRO 16 17 1 Y 1 A ARG -3 ? A ARG 17 18 1 Y 1 A GLY -2 ? A GLY 18 19 1 Y 1 A SER -1 ? A SER 19 20 1 Y 1 A HIS 0 ? A HIS 20 21 1 Y 1 A MET 1 ? A MET 21 22 1 Y 1 A GLY 2 ? A GLY 22 23 1 Y 1 A SER 3 ? A SER 23 24 1 Y 1 A GLU 4 ? A GLU 24 25 1 Y 1 A ASP 5 ? A ASP 25 26 1 Y 1 A HIS 6 ? A HIS 26 27 1 Y 1 A GLY 7 ? A GLY 27 28 1 Y 1 A ALA 8 ? A ALA 28 29 1 Y 1 A ASP 338 ? A ASP 358 30 1 Y 1 A LEU 339 ? A LEU 359 31 1 Y 1 A THR 340 ? A THR 360 32 1 Y 1 A VAL 341 ? A VAL 361 33 1 Y 1 A LEU 342 ? A LEU 362 34 1 Y 1 A ASP 343 ? A ASP 363 35 1 Y 1 A HIS 344 ? A HIS 364 36 1 Y 1 A THR 345 ? A THR 365 37 1 Y 1 A ARG 346 ? A ARG 366 38 1 Y 1 A PRO 347 ? A PRO 367 39 1 Y 1 A THR 348 ? A THR 368 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 M3L N N N N 230 M3L CA C N S 231 M3L CB C N N 232 M3L CG C N N 233 M3L CD C N N 234 M3L CE C N N 235 M3L NZ N N N 236 M3L C C N N 237 M3L O O N N 238 M3L OXT O N N 239 M3L CM1 C N N 240 M3L CM2 C N N 241 M3L CM3 C N N 242 M3L H H N N 243 M3L H2 H N N 244 M3L HA H N N 245 M3L HB2 H N N 246 M3L HB3 H N N 247 M3L HG2 H N N 248 M3L HG3 H N N 249 M3L HD2 H N N 250 M3L HD3 H N N 251 M3L HE2 H N N 252 M3L HE3 H N N 253 M3L HXT H N N 254 M3L HM11 H N N 255 M3L HM12 H N N 256 M3L HM13 H N N 257 M3L HM21 H N N 258 M3L HM22 H N N 259 M3L HM23 H N N 260 M3L HM31 H N N 261 M3L HM32 H N N 262 M3L HM33 H N N 263 MET N N N N 264 MET CA C N S 265 MET C C N N 266 MET O O N N 267 MET CB C N N 268 MET CG C N N 269 MET SD S N N 270 MET CE C N N 271 MET OXT O N N 272 MET H H N N 273 MET H2 H N N 274 MET HA H N N 275 MET HB2 H N N 276 MET HB3 H N N 277 MET HG2 H N N 278 MET HG3 H N N 279 MET HE1 H N N 280 MET HE2 H N N 281 MET HE3 H N N 282 MET HXT H N N 283 NI NI NI N N 284 PD2 O42 O N N 285 PD2 C41 C N N 286 PD2 O41 O N N 287 PD2 C4 C Y N 288 PD2 C5 C Y N 289 PD2 C6 C Y N 290 PD2 C3 C Y N 291 PD2 C2 C Y N 292 PD2 N1 N Y N 293 PD2 C21 C N N 294 PD2 O21 O N N 295 PD2 O22 O N N 296 PD2 H41 H N N 297 PD2 H5 H N N 298 PD2 H6 H N N 299 PD2 H3 H N N 300 PD2 H22 H N N 301 PHE N N N N 302 PHE CA C N S 303 PHE C C N N 304 PHE O O N N 305 PHE CB C N N 306 PHE CG C Y N 307 PHE CD1 C Y N 308 PHE CD2 C Y N 309 PHE CE1 C Y N 310 PHE CE2 C Y N 311 PHE CZ C Y N 312 PHE OXT O N N 313 PHE H H N N 314 PHE H2 H N N 315 PHE HA H N N 316 PHE HB2 H N N 317 PHE HB3 H N N 318 PHE HD1 H N N 319 PHE HD2 H N N 320 PHE HE1 H N N 321 PHE HE2 H N N 322 PHE HZ H N N 323 PHE HXT H N N 324 PRO N N N N 325 PRO CA C N S 326 PRO C C N N 327 PRO O O N N 328 PRO CB C N N 329 PRO CG C N N 330 PRO CD C N N 331 PRO OXT O N N 332 PRO H H N N 333 PRO HA H N N 334 PRO HB2 H N N 335 PRO HB3 H N N 336 PRO HG2 H N N 337 PRO HG3 H N N 338 PRO HD2 H N N 339 PRO HD3 H N N 340 PRO HXT H N N 341 SER N N N N 342 SER CA C N S 343 SER C C N N 344 SER O O N N 345 SER CB C N N 346 SER OG O N N 347 SER OXT O N N 348 SER H H N N 349 SER H2 H N N 350 SER HA H N N 351 SER HB2 H N N 352 SER HB3 H N N 353 SER HG H N N 354 SER HXT H N N 355 THR N N N N 356 THR CA C N S 357 THR C C N N 358 THR O O N N 359 THR CB C N R 360 THR OG1 O N N 361 THR CG2 C N N 362 THR OXT O N N 363 THR H H N N 364 THR H2 H N N 365 THR HA H N N 366 THR HB H N N 367 THR HG1 H N N 368 THR HG21 H N N 369 THR HG22 H N N 370 THR HG23 H N N 371 THR HXT H N N 372 TRP N N N N 373 TRP CA C N S 374 TRP C C N N 375 TRP O O N N 376 TRP CB C N N 377 TRP CG C Y N 378 TRP CD1 C Y N 379 TRP CD2 C Y N 380 TRP NE1 N Y N 381 TRP CE2 C Y N 382 TRP CE3 C Y N 383 TRP CZ2 C Y N 384 TRP CZ3 C Y N 385 TRP CH2 C Y N 386 TRP OXT O N N 387 TRP H H N N 388 TRP H2 H N N 389 TRP HA H N N 390 TRP HB2 H N N 391 TRP HB3 H N N 392 TRP HD1 H N N 393 TRP HE1 H N N 394 TRP HE3 H N N 395 TRP HZ2 H N N 396 TRP HZ3 H N N 397 TRP HH2 H N N 398 TRP HXT H N N 399 TYR N N N N 400 TYR CA C N S 401 TYR C C N N 402 TYR O O N N 403 TYR CB C N N 404 TYR CG C Y N 405 TYR CD1 C Y N 406 TYR CD2 C Y N 407 TYR CE1 C Y N 408 TYR CE2 C Y N 409 TYR CZ C Y N 410 TYR OH O N N 411 TYR OXT O N N 412 TYR H H N N 413 TYR H2 H N N 414 TYR HA H N N 415 TYR HB2 H N N 416 TYR HB3 H N N 417 TYR HD1 H N N 418 TYR HD2 H N N 419 TYR HE1 H N N 420 TYR HE2 H N N 421 TYR HH H N N 422 TYR HXT H N N 423 VAL N N N N 424 VAL CA C N S 425 VAL C C N N 426 VAL O O N N 427 VAL CB C N N 428 VAL CG1 C N N 429 VAL CG2 C N N 430 VAL OXT O N N 431 VAL H H N N 432 VAL H2 H N N 433 VAL HA H N N 434 VAL HB H N N 435 VAL HG11 H N N 436 VAL HG12 H N N 437 VAL HG13 H N N 438 VAL HG21 H N N 439 VAL HG22 H N N 440 VAL HG23 H N N 441 VAL HXT H N N 442 ZN ZN ZN N N 443 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 M3L N CA sing N N 218 M3L N H sing N N 219 M3L N H2 sing N N 220 M3L CA CB sing N N 221 M3L CA C sing N N 222 M3L CA HA sing N N 223 M3L CB CG sing N N 224 M3L CB HB2 sing N N 225 M3L CB HB3 sing N N 226 M3L CG CD sing N N 227 M3L CG HG2 sing N N 228 M3L CG HG3 sing N N 229 M3L CD CE sing N N 230 M3L CD HD2 sing N N 231 M3L CD HD3 sing N N 232 M3L CE NZ sing N N 233 M3L CE HE2 sing N N 234 M3L CE HE3 sing N N 235 M3L NZ CM1 sing N N 236 M3L NZ CM2 sing N N 237 M3L NZ CM3 sing N N 238 M3L C O doub N N 239 M3L C OXT sing N N 240 M3L OXT HXT sing N N 241 M3L CM1 HM11 sing N N 242 M3L CM1 HM12 sing N N 243 M3L CM1 HM13 sing N N 244 M3L CM2 HM21 sing N N 245 M3L CM2 HM22 sing N N 246 M3L CM2 HM23 sing N N 247 M3L CM3 HM31 sing N N 248 M3L CM3 HM32 sing N N 249 M3L CM3 HM33 sing N N 250 MET N CA sing N N 251 MET N H sing N N 252 MET N H2 sing N N 253 MET CA C sing N N 254 MET CA CB sing N N 255 MET CA HA sing N N 256 MET C O doub N N 257 MET C OXT sing N N 258 MET CB CG sing N N 259 MET CB HB2 sing N N 260 MET CB HB3 sing N N 261 MET CG SD sing N N 262 MET CG HG2 sing N N 263 MET CG HG3 sing N N 264 MET SD CE sing N N 265 MET CE HE1 sing N N 266 MET CE HE2 sing N N 267 MET CE HE3 sing N N 268 MET OXT HXT sing N N 269 PD2 O42 C41 doub N N 270 PD2 C41 O41 sing N N 271 PD2 C41 C4 sing N N 272 PD2 O41 H41 sing N N 273 PD2 C4 C5 doub Y N 274 PD2 C4 C3 sing Y N 275 PD2 C5 C6 sing Y N 276 PD2 C5 H5 sing N N 277 PD2 C6 N1 doub Y N 278 PD2 C6 H6 sing N N 279 PD2 C3 C2 doub Y N 280 PD2 C3 H3 sing N N 281 PD2 C2 N1 sing Y N 282 PD2 C2 C21 sing N N 283 PD2 C21 O21 doub N N 284 PD2 C21 O22 sing N N 285 PD2 O22 H22 sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'PYRIDINE-2,4-DICARBOXYLIC ACID' PD2 4 'NICKEL (II) ION' NI 5 'ZINC ION' ZN 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 2YBS _pdbx_initial_refinement_model.details ? #