HEADER SIGNALING PROTEIN/INHIBITOR 31-JUL-13 4LYH TITLE CRYSTAL STRUCTURE OF SMALL MOLECULE VINYLSULFONAMIDE 9 COVALENTLY TITLE 2 BOUND TO K-RAS G12C CAVEAT 4LYH CHIRALITY ERROR AT CA ATOM OF ARG B149 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GTPASE KRAS; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: UNP RESIDUES 1-169; COMPND 5 SYNONYM: K-RAS 2, KI-RAS, C-K-RAS, C-KI-RAS, GTPASE KRAS, N- COMPND 6 TERMINALLY PROCESSED; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KRAS, KRAS ISOFORM 2B, KRAS2, RASK2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PJEXPRESS411 KEYWDS GTPASE, GDP BOUND, SMALL MOLECULE INHIBITOR, COVALENT BINDER, KEYWDS 2 SIGNALING PROTEIN-INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT REVDAT 3 15-NOV-17 4LYH 1 REMARK REVDAT 2 18-DEC-13 4LYH 1 JRNL REVDAT 1 27-NOV-13 4LYH 0 JRNL AUTH J.M.OSTREM,U.PETERS,M.L.SOS,J.A.WELLS,K.M.SHOKAT JRNL TITL K-RAS(G12C) INHIBITORS ALLOSTERICALLY CONTROL GTP AFFINITY JRNL TITL 2 AND EFFECTOR INTERACTIONS. JRNL REF NATURE V. 503 548 2013 JRNL REFN ISSN 0028-0836 JRNL PMID 24256730 JRNL DOI 10.1038/NATURE12796 REMARK 2 REMARK 2 RESOLUTION. 1.37 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX DEV_1402 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.37 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.12 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 94646 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.165 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.120 REMARK 3 FREE R VALUE TEST SET COUNT : 2007 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.1239 - 3.2985 0.99 6664 147 0.1809 0.2152 REMARK 3 2 3.2985 - 2.6202 1.00 6642 144 0.1669 0.1809 REMARK 3 3 2.6202 - 2.2896 1.00 6655 144 0.1457 0.1497 REMARK 3 4 2.2896 - 2.0806 1.00 6638 143 0.1426 0.1640 REMARK 3 5 2.0806 - 1.9316 1.00 6616 140 0.1452 0.1481 REMARK 3 6 1.9316 - 1.8178 1.00 6654 139 0.1529 0.1888 REMARK 3 7 1.8178 - 1.7268 1.00 6597 154 0.1568 0.2010 REMARK 3 8 1.7268 - 1.6517 1.00 6638 133 0.1616 0.1950 REMARK 3 9 1.6517 - 1.5882 1.00 6595 145 0.1584 0.1761 REMARK 3 10 1.5882 - 1.5334 1.00 6608 148 0.1642 0.1883 REMARK 3 11 1.5334 - 1.4854 1.00 6629 139 0.1745 0.2023 REMARK 3 12 1.4854 - 1.4430 1.00 6605 141 0.1897 0.2229 REMARK 3 13 1.4430 - 1.4050 1.00 6585 146 0.2090 0.2386 REMARK 3 14 1.4050 - 1.3708 0.99 6513 144 0.2212 0.2684 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.58 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.023 4082 REMARK 3 ANGLE : 1.932 5546 REMARK 3 CHIRALITY : 0.115 623 REMARK 3 PLANARITY : 0.011 693 REMARK 3 DIHEDRAL : 21.281 1583 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 19 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 102.4378 15.7513 149.3516 REMARK 3 T TENSOR REMARK 3 T11: 0.0719 T22: 0.1550 REMARK 3 T33: 0.0983 T12: 0.0171 REMARK 3 T13: 0.0163 T23: 0.0081 REMARK 3 L TENSOR REMARK 3 L11: 2.7938 L22: 3.2538 REMARK 3 L33: 2.3145 L12: -0.6594 REMARK 3 L13: 0.8638 L23: -0.5083 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: -0.0857 S13: -0.1341 REMARK 3 S21: -0.0688 S22: -0.0240 S23: -0.2145 REMARK 3 S31: 0.1586 S32: 0.2989 S33: 0.0111 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.9415 13.2115 146.1977 REMARK 3 T TENSOR REMARK 3 T11: 0.2007 T22: 0.2264 REMARK 3 T33: 0.2008 T12: 0.0273 REMARK 3 T13: 0.0078 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 1.8540 L22: 2.4505 REMARK 3 L33: 4.4993 L12: 0.9543 REMARK 3 L13: 0.0379 L23: 0.7867 REMARK 3 S TENSOR REMARK 3 S11: -0.0000 S12: 0.0325 S13: -0.0178 REMARK 3 S21: -0.3047 S22: -0.0761 S23: -0.1642 REMARK 3 S31: -0.1048 S32: 0.3879 S33: 0.0856 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 75 THROUGH 104 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.4762 17.9315 141.5930 REMARK 3 T TENSOR REMARK 3 T11: 0.1434 T22: 0.1007 REMARK 3 T33: 0.1122 T12: 0.0059 REMARK 3 T13: -0.0331 T23: -0.0171 REMARK 3 L TENSOR REMARK 3 L11: 1.7147 L22: 3.1057 REMARK 3 L33: 1.7620 L12: -1.1006 REMARK 3 L13: 0.1635 L23: -0.0107 REMARK 3 S TENSOR REMARK 3 S11: 0.1520 S12: 0.1830 S13: -0.2050 REMARK 3 S21: -0.5320 S22: -0.1314 S23: 0.1532 REMARK 3 S31: 0.1255 S32: 0.0349 S33: -0.0003 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 105 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.7802 21.0162 149.0467 REMARK 3 T TENSOR REMARK 3 T11: 0.0820 T22: 0.0832 REMARK 3 T33: 0.0949 T12: -0.0073 REMARK 3 T13: -0.0050 T23: 0.0189 REMARK 3 L TENSOR REMARK 3 L11: 2.6460 L22: 3.5871 REMARK 3 L33: 2.7083 L12: -0.3849 REMARK 3 L13: 0.4530 L23: 0.2788 REMARK 3 S TENSOR REMARK 3 S11: 0.0172 S12: 0.0495 S13: -0.0814 REMARK 3 S21: -0.0735 S22: 0.0338 S23: 0.2292 REMARK 3 S31: 0.0207 S32: -0.0313 S33: 0.0154 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 127 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.6356 21.0066 153.5108 REMARK 3 T TENSOR REMARK 3 T11: 0.1256 T22: 0.1214 REMARK 3 T33: 0.1205 T12: -0.0102 REMARK 3 T13: 0.0141 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 7.6690 L22: 3.8001 REMARK 3 L33: 2.2676 L12: 2.6112 REMARK 3 L13: 3.3235 L23: 1.8074 REMARK 3 S TENSOR REMARK 3 S11: 0.0402 S12: -0.2919 S13: 0.0660 REMARK 3 S21: 0.1571 S22: -0.0699 S23: 0.2627 REMARK 3 S31: 0.0155 S32: -0.1284 S33: 0.0101 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 152 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.2231 8.1479 155.2181 REMARK 3 T TENSOR REMARK 3 T11: 0.1526 T22: 0.1412 REMARK 3 T33: 0.1316 T12: 0.0075 REMARK 3 T13: -0.0078 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 7.4918 L22: 7.1039 REMARK 3 L33: 6.3459 L12: 3.3115 REMARK 3 L13: 1.0752 L23: 2.4415 REMARK 3 S TENSOR REMARK 3 S11: 0.0720 S12: -0.2449 S13: -0.4309 REMARK 3 S21: 0.4487 S22: -0.0219 S23: 0.1955 REMARK 3 S31: 0.5431 S32: -0.1522 S33: -0.0464 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.2787 17.0604 180.8453 REMARK 3 T TENSOR REMARK 3 T11: 0.1640 T22: 0.1227 REMARK 3 T33: 0.2089 T12: 0.0172 REMARK 3 T13: 0.0306 T23: -0.0121 REMARK 3 L TENSOR REMARK 3 L11: 1.9297 L22: 3.3341 REMARK 3 L33: 2.6217 L12: -0.7343 REMARK 3 L13: 0.4972 L23: -0.5076 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: -0.1516 S13: 0.4472 REMARK 3 S21: 0.0672 S22: 0.0921 S23: 0.2455 REMARK 3 S31: -0.4093 S32: -0.1108 S33: -0.0569 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 26 THROUGH 48 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.1718 24.2897 179.4435 REMARK 3 T TENSOR REMARK 3 T11: 0.4514 T22: 0.2182 REMARK 3 T33: 0.3787 T12: -0.0311 REMARK 3 T13: 0.1263 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 3.0760 L22: 2.2635 REMARK 3 L33: 5.6682 L12: -2.2732 REMARK 3 L13: 3.7726 L23: -2.4513 REMARK 3 S TENSOR REMARK 3 S11: -0.0676 S12: -0.2390 S13: 0.3503 REMARK 3 S21: 0.3641 S22: 0.0644 S23: 0.0100 REMARK 3 S31: -1.0041 S32: -0.1337 S33: -0.0372 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 49 THROUGH 64 ) REMARK 3 ORIGIN FOR THE GROUP (A): 79.9940 17.6917 182.0272 REMARK 3 T TENSOR REMARK 3 T11: 0.2543 T22: 0.2020 REMARK 3 T33: 0.3213 T12: 0.0532 REMARK 3 T13: -0.0079 T23: -0.0380 REMARK 3 L TENSOR REMARK 3 L11: 6.2029 L22: 6.9177 REMARK 3 L33: 6.1285 L12: 6.0655 REMARK 3 L13: -6.0554 L23: -6.4682 REMARK 3 S TENSOR REMARK 3 S11: -0.0314 S12: -0.1275 S13: 0.2226 REMARK 3 S21: -0.0657 S22: 0.0614 S23: 0.1497 REMARK 3 S31: -0.2221 S32: -0.2012 S33: -0.0808 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 65 THROUGH 83 ) REMARK 3 ORIGIN FOR THE GROUP (A): 78.0269 9.8641 178.8702 REMARK 3 T TENSOR REMARK 3 T11: 0.1195 T22: 0.1488 REMARK 3 T33: 0.1967 T12: 0.0241 REMARK 3 T13: -0.0224 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 4.3221 L22: 2.2191 REMARK 3 L33: 1.7022 L12: -0.9013 REMARK 3 L13: 0.8154 L23: -0.4902 REMARK 3 S TENSOR REMARK 3 S11: -0.0156 S12: -0.0618 S13: 0.1961 REMARK 3 S21: -0.0446 S22: 0.0488 S23: 0.4308 REMARK 3 S31: -0.1100 S32: -0.3420 S33: -0.0253 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 84 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): 87.7854 2.9050 176.7555 REMARK 3 T TENSOR REMARK 3 T11: 0.0936 T22: 0.0685 REMARK 3 T33: 0.0768 T12: 0.0135 REMARK 3 T13: -0.0067 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 4.3545 L22: 3.0377 REMARK 3 L33: 2.3766 L12: -0.4376 REMARK 3 L13: 1.0479 L23: -0.3787 REMARK 3 S TENSOR REMARK 3 S11: 0.0950 S12: 0.1342 S13: -0.1484 REMARK 3 S21: -0.1787 S22: -0.0394 S23: 0.2647 REMARK 3 S31: 0.0805 S32: -0.0870 S33: -0.0605 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 137 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.2769 0.2506 168.0338 REMARK 3 T TENSOR REMARK 3 T11: 0.2112 T22: 0.1565 REMARK 3 T33: 0.1192 T12: 0.0207 REMARK 3 T13: 0.0262 T23: -0.0083 REMARK 3 L TENSOR REMARK 3 L11: 7.4025 L22: 3.6308 REMARK 3 L33: 2.7891 L12: 1.9434 REMARK 3 L13: 2.2188 L23: -1.7459 REMARK 3 S TENSOR REMARK 3 S11: 0.0772 S12: 0.2338 S13: 0.0941 REMARK 3 S21: -0.5260 S22: -0.0319 S23: -0.1076 REMARK 3 S31: 0.0386 S32: 0.2820 S33: -0.0571 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 138 THROUGH 151 ) REMARK 3 ORIGIN FOR THE GROUP (A): 96.9556 11.7762 176.8279 REMARK 3 T TENSOR REMARK 3 T11: 0.1687 T22: 0.0976 REMARK 3 T33: 0.1488 T12: -0.0130 REMARK 3 T13: 0.0129 T23: 0.0225 REMARK 3 L TENSOR REMARK 3 L11: 5.7136 L22: 4.7109 REMARK 3 L33: 6.2032 L12: 2.5282 REMARK 3 L13: 4.6814 L23: 4.3965 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: 0.0684 S13: 0.2389 REMARK 3 S21: -0.1869 S22: 0.2654 S23: -0.6163 REMARK 3 S31: -0.4686 S32: 0.4088 S33: -0.0099 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 152 THROUGH 169 ) REMARK 3 ORIGIN FOR THE GROUP (A): 86.7952 17.5561 167.6599 REMARK 3 T TENSOR REMARK 3 T11: 0.2696 T22: 0.1831 REMARK 3 T33: 0.2031 T12: 0.0313 REMARK 3 T13: -0.0214 T23: 0.0730 REMARK 3 L TENSOR REMARK 3 L11: 4.6868 L22: 2.8598 REMARK 3 L33: 5.7941 L12: -0.3987 REMARK 3 L13: 1.0873 L23: -0.7908 REMARK 3 S TENSOR REMARK 3 S11: 0.0227 S12: 0.6910 S13: 0.4676 REMARK 3 S21: -0.6755 S22: 0.0065 S23: 0.1105 REMARK 3 S31: -0.3314 S32: -0.1240 S33: 0.0968 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 1 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.2141 28.5677 206.0026 REMARK 3 T TENSOR REMARK 3 T11: 0.2338 T22: 0.2088 REMARK 3 T33: 0.1397 T12: -0.0127 REMARK 3 T13: -0.0482 T23: 0.0714 REMARK 3 L TENSOR REMARK 3 L11: 1.8978 L22: 1.8471 REMARK 3 L33: 2.2969 L12: -1.1984 REMARK 3 L13: 0.0049 L23: -0.7000 REMARK 3 S TENSOR REMARK 3 S11: 0.1681 S12: -0.4983 S13: -0.2056 REMARK 3 S21: 0.5211 S22: -0.1807 S23: -0.1304 REMARK 3 S31: 0.3598 S32: 0.0527 S33: -0.0466 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 26 THROUGH 74 ) REMARK 3 ORIGIN FOR THE GROUP (A): 73.8860 31.5385 209.9048 REMARK 3 T TENSOR REMARK 3 T11: 0.2606 T22: 0.3644 REMARK 3 T33: 0.2231 T12: -0.0420 REMARK 3 T13: 0.0471 T23: 0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.1320 L22: 7.9611 REMARK 3 L33: 3.8263 L12: 0.1490 REMARK 3 L13: 0.1482 L23: 0.1951 REMARK 3 S TENSOR REMARK 3 S11: 0.0182 S12: -0.2422 S13: -0.2287 REMARK 3 S21: 0.4647 S22: -0.1529 S23: 0.7500 REMARK 3 S31: -0.0169 S32: 0.0951 S33: 0.1367 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 75 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 70.5857 39.2732 196.9352 REMARK 3 T TENSOR REMARK 3 T11: 0.1602 T22: 0.1093 REMARK 3 T33: 0.0978 T12: 0.0000 REMARK 3 T13: 0.0028 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 2.4812 L22: 2.8773 REMARK 3 L33: 3.8646 L12: 0.4224 REMARK 3 L13: 1.0713 L23: 0.6563 REMARK 3 S TENSOR REMARK 3 S11: -0.0191 S12: -0.2132 S13: 0.1774 REMARK 3 S21: 0.0564 S22: -0.0503 S23: 0.0020 REMARK 3 S31: -0.4774 S32: -0.0939 S33: 0.0666 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 117 THROUGH 143 ) REMARK 3 ORIGIN FOR THE GROUP (A): 74.7324 32.5749 187.3904 REMARK 3 T TENSOR REMARK 3 T11: 0.1235 T22: 0.1690 REMARK 3 T33: 0.1238 T12: -0.0030 REMARK 3 T13: 0.0291 T23: -0.0046 REMARK 3 L TENSOR REMARK 3 L11: 2.8808 L22: 5.8027 REMARK 3 L33: 2.2115 L12: 2.4761 REMARK 3 L13: 0.7067 L23: -0.4628 REMARK 3 S TENSOR REMARK 3 S11: -0.1811 S12: 0.4975 S13: -0.2021 REMARK 3 S21: -0.5015 S22: 0.1881 S23: -0.2548 REMARK 3 S31: 0.0420 S32: 0.1325 S33: -0.0063 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 144 THROUGH 168 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.5919 30.2401 201.1389 REMARK 3 T TENSOR REMARK 3 T11: 0.1178 T22: 0.2175 REMARK 3 T33: 0.1803 T12: 0.0024 REMARK 3 T13: -0.0345 T23: 0.0777 REMARK 3 L TENSOR REMARK 3 L11: 3.1726 L22: 5.5905 REMARK 3 L33: 4.3074 L12: 0.1259 REMARK 3 L13: 0.6964 L23: 1.8427 REMARK 3 S TENSOR REMARK 3 S11: 0.1223 S12: -0.1951 S13: -0.2704 REMARK 3 S21: 0.2923 S22: 0.0319 S23: -0.6429 REMARK 3 S31: 0.0776 S32: 0.5163 S33: -0.1726 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4LYH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081244. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL, SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 94659 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.370 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.05100 REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 21.5470 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.37 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36300 REMARK 200 R SYM FOR SHELL (I) : 0.36300 REMARK 200 FOR SHELL : 3.675 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.03 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.98 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.9M (NH4)2SO4, 0.2M NACL, 0.1M NA REMARK 280 -CACODYLATE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.01450 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.76250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.01450 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 41.76250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 327 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLU A 31 REMARK 465 TYR A 32 REMARK 465 ASP A 33 REMARK 465 PRO A 34 REMARK 465 THR A 35 REMARK 465 LYS A 169 REMARK 465 GLY B 0 REMARK 465 ASP B 30 REMARK 465 GLU B 31 REMARK 465 TYR B 32 REMARK 465 ASP B 33 REMARK 465 PRO B 34 REMARK 465 THR B 35 REMARK 465 ILE B 36 REMARK 465 GLU B 37 REMARK 465 ASP B 38 REMARK 465 SER B 39 REMARK 465 GLY C 0 REMARK 465 ASP C 30 REMARK 465 GLU C 31 REMARK 465 TYR C 32 REMARK 465 ASP C 33 REMARK 465 PRO C 34 REMARK 465 THR C 35 REMARK 465 ILE C 36 REMARK 465 GLU C 37 REMARK 465 ASP C 38 REMARK 465 GLN C 61 REMARK 465 GLU C 62 REMARK 465 GLU C 63 REMARK 465 LYS C 169 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 VAL A 29 CG1 CG2 REMARK 470 GLU A 168 CG CD OE1 OE2 REMARK 470 ASP B 105 CG OD1 OD2 REMARK 470 GLU B 107 CG CD OE1 OE2 REMARK 470 SER C 39 OG REMARK 470 TYR C 64 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 MET C 67 CG SD CE REMARK 470 ARG C 102 CG CD NE CZ NH1 NH2 REMARK 470 GLU C 107 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN B 22 HE ARG B 149 1.54 REMARK 500 HH22 ARG B 102 O HOH B 393 1.55 REMARK 500 HE ARG A 149 O HOH A 450 1.56 REMARK 500 O GLN C 22 HH12 ARG C 149 1.59 REMARK 500 O HOH B 415 O HOH B 418 1.88 REMARK 500 ND1 HIS C 94 O HOH C 362 1.88 REMARK 500 O HOH A 450 O HOH A 451 1.91 REMARK 500 O HOH C 373 O HOH C 374 1.92 REMARK 500 O HOH B 405 O HOH B 415 1.94 REMARK 500 OE1 GLU C 49 O HOH C 391 1.96 REMARK 500 OE1 GLU C 143 O HOH C 376 1.96 REMARK 500 O HOH B 327 O HOH B 358 1.98 REMARK 500 O HOH A 423 O HOH A 432 2.00 REMARK 500 N TYR C 64 O HOH C 368 2.06 REMARK 500 O GLY C 60 O HOH C 380 2.07 REMARK 500 OD2 ASP C 126 O HOH C 372 2.09 REMARK 500 O HOH B 387 O HOH B 421 2.10 REMARK 500 I04 21F B 201 O HOH B 312 2.11 REMARK 500 O HOH A 394 O HOH A 432 2.14 REMARK 500 OE2 GLU B 63 O HOH B 404 2.15 REMARK 500 OE1 GLU B 143 O HOH B 324 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 HG1 THR A 50 HG1 THR A 50 21059 1.27 REMARK 500 O HOH A 427 O HOH A 429 21059 1.95 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TYR B 96 CZ TYR B 96 CE2 -0.111 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 38 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 ARG A 97 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ASP A 153 CB - CG - OD2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG C 73 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG C 73 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 149 -0.19 77.43 REMARK 500 LYS B 117 36.10 70.44 REMARK 500 SER B 122 50.87 -96.21 REMARK 500 ARG B 149 -5.25 81.92 REMARK 500 LYS C 117 34.27 75.13 REMARK 500 ARG C 149 -3.37 74.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 21F B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 21F C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GDP C 203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4L8G RELATED DB: PDB REMARK 900 RELATED PROTEIN MUTANT REMARK 900 RELATED ID: 4LUC RELATED DB: PDB REMARK 900 PROTEIN BOUND TO RELATED COMPOUND REMARK 900 RELATED ID: 4LYF RELATED DB: PDB REMARK 900 PROTEIN BOUND TO RELATED COMPOUND REMARK 900 RELATED ID: 4L9W RELATED DB: PDB REMARK 900 RELATED PROTEIN ISOFORM REMARK 900 RELATED ID: 4L9S RELATED DB: PDB REMARK 900 RELATED PROTEIN ISOFORM REMARK 900 RELATED ID: 4LPK RELATED DB: PDB REMARK 900 WILD-TYPE FORM OF PROTEIN REMARK 900 RELATED ID: 4LV6 RELATED DB: PDB REMARK 900 PROTEIN BOUND TO RELATED COMPOUND REMARK 900 RELATED ID: 4LRW RELATED DB: PDB REMARK 900 PROTEIN WITHOUT INHIBITOR BOUND REMARK 900 RELATED ID: 4LYJ RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1O RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1S RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1T RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1W RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M1Y RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M21 RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 900 RELATED ID: 4M22 RELATED DB: PDB REMARK 900 RELATED COMPOUND BOUND TO PROTEIN REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE IN THE STRUCTURE REPRESENTS ISOFORM 2B OF GTPASE KRAS. REMARK 999 THIS ISOFORM DIFFERS FROM THE CANONICAL SEQUENCE AS FOLLOW: 151-153 REMARK 999 (RVE TO GVD) AND 165-169 (QYRLK TO KHKEK) DBREF 4LYH A 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 4LYH B 1 169 UNP P01116 RASK_HUMAN 1 169 DBREF 4LYH C 1 169 UNP P01116 RASK_HUMAN 1 169 SEQADV 4LYH GLY A 0 UNP P01116 EXPRESSION TAG SEQADV 4LYH CYS A 12 UNP P01116 GLY 12 VARIANT SEQADV 4LYH SER A 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4LYH LEU A 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4LYH SER A 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4LYH GLY A 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4LYH ASP A 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4LYH LYS A 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4LYH HIS A 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4LYH LYS A 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4LYH GLU A 168 UNP P01116 LEU 168 SEE REMARK 999 SEQADV 4LYH GLY B 0 UNP P01116 EXPRESSION TAG SEQADV 4LYH CYS B 12 UNP P01116 GLY 12 VARIANT SEQADV 4LYH SER B 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4LYH LEU B 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4LYH SER B 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4LYH GLY B 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4LYH ASP B 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4LYH LYS B 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4LYH HIS B 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4LYH LYS B 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4LYH GLU B 168 UNP P01116 LEU 168 SEE REMARK 999 SEQADV 4LYH GLY C 0 UNP P01116 EXPRESSION TAG SEQADV 4LYH CYS C 12 UNP P01116 GLY 12 VARIANT SEQADV 4LYH SER C 51 UNP P01116 CYS 51 ENGINEERED MUTATION SEQADV 4LYH LEU C 80 UNP P01116 CYS 80 ENGINEERED MUTATION SEQADV 4LYH SER C 118 UNP P01116 CYS 118 ENGINEERED MUTATION SEQADV 4LYH GLY C 151 UNP P01116 ARG 151 SEE REMARK 999 SEQADV 4LYH ASP C 153 UNP P01116 GLU 153 SEE REMARK 999 SEQADV 4LYH LYS C 165 UNP P01116 GLN 165 SEE REMARK 999 SEQADV 4LYH HIS C 166 UNP P01116 TYR 166 SEE REMARK 999 SEQADV 4LYH LYS C 167 UNP P01116 ARG 167 SEE REMARK 999 SEQADV 4LYH GLU C 168 UNP P01116 LEU 168 SEE REMARK 999 SEQRES 1 A 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 A 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 A 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 A 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 A 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 A 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 A 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 A 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 A 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 A 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 A 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 A 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 A 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 A 170 LYS SEQRES 1 B 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 B 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 B 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 B 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 B 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 B 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 B 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 B 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 B 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 B 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 B 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 B 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 B 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 B 170 LYS SEQRES 1 C 170 GLY MET THR GLU TYR LYS LEU VAL VAL VAL GLY ALA CYS SEQRES 2 C 170 GLY VAL GLY LYS SER ALA LEU THR ILE GLN LEU ILE GLN SEQRES 3 C 170 ASN HIS PHE VAL ASP GLU TYR ASP PRO THR ILE GLU ASP SEQRES 4 C 170 SER TYR ARG LYS GLN VAL VAL ILE ASP GLY GLU THR SER SEQRES 5 C 170 LEU LEU ASP ILE LEU ASP THR ALA GLY GLN GLU GLU TYR SEQRES 6 C 170 SER ALA MET ARG ASP GLN TYR MET ARG THR GLY GLU GLY SEQRES 7 C 170 PHE LEU LEU VAL PHE ALA ILE ASN ASN THR LYS SER PHE SEQRES 8 C 170 GLU ASP ILE HIS HIS TYR ARG GLU GLN ILE LYS ARG VAL SEQRES 9 C 170 LYS ASP SER GLU ASP VAL PRO MET VAL LEU VAL GLY ASN SEQRES 10 C 170 LYS SER ASP LEU PRO SER ARG THR VAL ASP THR LYS GLN SEQRES 11 C 170 ALA GLN ASP LEU ALA ARG SER TYR GLY ILE PRO PHE ILE SEQRES 12 C 170 GLU THR SER ALA LYS THR ARG GLN GLY VAL ASP ASP ALA SEQRES 13 C 170 PHE TYR THR LEU VAL ARG GLU ILE ARG LYS HIS LYS GLU SEQRES 14 C 170 LYS HET SO4 A 201 5 HET GDP A 202 38 HET 21F B 201 48 HET GDP B 202 38 HET SO4 C 201 5 HET 21F C 202 46 HET GDP C 203 38 HETNAM SO4 SULFATE ION HETNAM GDP GUANOSINE-5'-DIPHOSPHATE HETNAM 21F N-{1-[N-(4-CHLORO-5-IODO-2-METHOXYPHENYL) HETNAM 2 21F GLYCYL]PIPERIDIN-4-YL}ETHANESULFONAMIDE FORMUL 4 SO4 2(O4 S 2-) FORMUL 5 GDP 3(C10 H15 N5 O11 P2) FORMUL 6 21F 2(C16 H23 CL I N3 O4 S) FORMUL 11 HOH *389(H2 O) HELIX 1 1 GLY A 15 ASN A 26 1 12 HELIX 2 2 TYR A 64 GLY A 75 1 12 HELIX 3 3 ASN A 86 ASP A 92 1 7 HELIX 4 4 ASP A 92 ASP A 105 1 14 HELIX 5 5 ASP A 126 GLY A 138 1 13 HELIX 6 6 GLY A 151 GLU A 168 1 18 HELIX 7 7 GLY B 15 ASN B 26 1 12 HELIX 8 8 TYR B 64 GLY B 75 1 12 HELIX 9 9 ASN B 86 ASP B 92 1 7 HELIX 10 10 ASP B 92 ASP B 105 1 14 HELIX 11 11 ASP B 126 GLY B 138 1 13 HELIX 12 12 GLY B 151 LYS B 169 1 19 HELIX 13 13 GLY C 15 ASN C 26 1 12 HELIX 14 14 SER C 65 GLY C 75 1 11 HELIX 15 15 ASN C 86 ASP C 92 1 7 HELIX 16 16 ASP C 92 ASP C 105 1 14 HELIX 17 17 ASP C 126 GLY C 138 1 13 HELIX 18 18 GLY C 151 GLU C 168 1 18 SHEET 1 A 6 SER A 39 ILE A 46 0 SHEET 2 A 6 GLU A 49 THR A 58 -1 O LEU A 53 N LYS A 42 SHEET 3 A 6 GLU A 3 VAL A 9 1 N LEU A 6 O ASP A 54 SHEET 4 A 6 GLY A 77 ALA A 83 1 O VAL A 81 N VAL A 9 SHEET 5 A 6 MET A 111 ASN A 116 1 O VAL A 114 N LEU A 80 SHEET 6 A 6 PHE A 141 GLU A 143 1 O ILE A 142 N LEU A 113 SHEET 1 B 6 ARG B 41 ILE B 46 0 SHEET 2 B 6 GLU B 49 ILE B 55 -1 O LEU B 53 N LYS B 42 SHEET 3 B 6 GLU B 3 GLY B 10 1 N TYR B 4 O ASP B 54 SHEET 4 B 6 GLY B 77 ALA B 83 1 O LEU B 79 N VAL B 9 SHEET 5 B 6 MET B 111 ASN B 116 1 O ASN B 116 N PHE B 82 SHEET 6 B 6 PHE B 141 GLU B 143 1 O ILE B 142 N LEU B 113 SHEET 1 C 6 TYR C 40 ILE C 46 0 SHEET 2 C 6 GLU C 49 ASP C 57 -1 O LEU C 53 N LYS C 42 SHEET 3 C 6 THR C 2 GLY C 10 1 N LEU C 6 O ASP C 54 SHEET 4 C 6 GLY C 77 ALA C 83 1 O LEU C 79 N VAL C 9 SHEET 5 C 6 MET C 111 ASN C 116 1 O ASN C 116 N PHE C 82 SHEET 6 C 6 PHE C 141 GLU C 143 1 O ILE C 142 N LEU C 113 LINK SG CYS B 12 C17 21F B 201 1555 1555 1.83 LINK SG CYS C 12 C17 21F C 202 1555 1555 1.83 SITE 1 AC1 5 TYR A 64 SER A 65 ALA A 66 MET A 67 SITE 2 AC1 5 HOH A 414 SITE 1 AC2 26 GLY A 13 VAL A 14 GLY A 15 LYS A 16 SITE 2 AC2 26 SER A 17 ALA A 18 PHE A 28 VAL A 29 SITE 3 AC2 26 ASP A 30 ASN A 116 LYS A 117 ASP A 119 SITE 4 AC2 26 LEU A 120 SER A 145 ALA A 146 LYS A 147 SITE 5 AC2 26 HOH A 318 HOH A 326 HOH A 338 HOH A 349 SITE 6 AC2 26 HOH A 350 HOH A 370 HOH A 409 HOH A 426 SITE 7 AC2 26 HOH A 440 HOH A 447 SITE 1 AC3 11 VAL B 9 GLY B 10 CYS B 12 THR B 58 SITE 2 AC3 11 GLU B 62 ARG B 68 TYR B 71 MET B 72 SITE 3 AC3 11 TYR B 96 GLN B 99 HOH B 312 SITE 1 AC4 26 GLY B 13 VAL B 14 GLY B 15 LYS B 16 SITE 2 AC4 26 SER B 17 ALA B 18 PHE B 28 ASN B 116 SITE 3 AC4 26 LYS B 117 ASP B 119 LEU B 120 SER B 145 SITE 4 AC4 26 ALA B 146 LYS B 147 HOH B 303 HOH B 318 SITE 5 AC4 26 HOH B 329 HOH B 340 HOH B 353 HOH B 355 SITE 6 AC4 26 HOH B 394 HOH B 396 HOH B 410 HOH B 411 SITE 7 AC4 26 HOH B 417 HOH B 420 SITE 1 AC5 6 LYS C 5 LEU C 6 VAL C 7 ASP C 54 SITE 2 AC5 6 LEU C 56 HOH C 389 SITE 1 AC6 10 GLY C 10 CYS C 12 THR C 58 ALA C 59 SITE 2 AC6 10 GLY C 60 TYR C 71 MET C 72 TYR C 96 SITE 3 AC6 10 GLN C 99 HOH C 386 SITE 1 AC7 18 GLY C 13 VAL C 14 GLY C 15 LYS C 16 SITE 2 AC7 18 SER C 17 ALA C 18 PHE C 28 ALA C 59 SITE 3 AC7 18 ASN C 116 LYS C 117 ASP C 119 LEU C 120 SITE 4 AC7 18 SER C 145 ALA C 146 LYS C 147 HOH C 324 SITE 5 AC7 18 HOH C 390 HOH C 392 CRYST1 68.029 83.525 86.975 90.00 111.13 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014700 0.000000 0.005681 0.00000 SCALE2 0.000000 0.011972 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012326 0.00000