data_4M2Z # _entry.id 4M2Z # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.377 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4M2Z pdb_00004m2z 10.2210/pdb4m2z/pdb NDB NA2683 ? ? RCSB RCSB081400 ? ? WWPDB D_1000081400 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2NUG 'CRYSTAL STRUCTURE OF RNASE III COMPLEXED WITH DOUBLE-STRANDED RNA (TYPE I CLEAVAGE)' unspecified PDB 4M30 . unspecified # _pdbx_database_status.entry_id 4M2Z _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-08-05 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Gan, J.' 1 ? 'Liang, Y.-H.' 2 ? 'Shaw, G.X.' 3 ? 'Tropea, J.E.' 4 ? 'Waugh, D.S.' 5 ? 'Ji, X.' 6 0000-0001-6942-1514 # _citation.id primary _citation.title 'RNase III: Genetics and Function; Structure and Mechanism.' _citation.journal_abbrev 'Annu. Rev. Genet.' _citation.journal_volume 47 _citation.page_first 405 _citation.page_last 431 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 0066-4197 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24274754 _citation.pdbx_database_id_DOI 10.1146/annurev-genet-110711-155618 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Court, D.L.' 1 ? primary 'Gan, J.' 2 ? primary 'Liang, Y.H.' 3 ? primary 'Shaw, G.X.' 4 ? primary 'Tropea, J.E.' 5 ? primary 'Costantino, N.' 6 ? primary 'Waugh, D.S.' 7 ? primary 'Ji, X.' 8 0000-0001-6942-1514 # _cell.length_a 81.131 _cell.length_b 81.131 _cell.length_c 223.892 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.entry_id 4M2Z _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.entry_id 4M2Z _symmetry.Int_Tables_number 154 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribonuclease 3' 26147.381 2 3.1.26.3 ? ? ? 2 polymer syn RNA10 8705.216 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 6 ? ? ? ? 4 non-polymer syn "CYTIDINE-5'-MONOPHOSPHATE" 323.197 2 ? ? ? ? 5 water nat water 18.015 22 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Ribonuclease III, RNase III' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; A,B ? 2 polyribonucleotide no no AAGGUCAUUCGCAAGAGUGGCCUUGCG AAGGUCAUUCGCAAGAGUGGCCUUGCG C,D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 MET n 1 4 LEU n 1 5 GLU n 1 6 GLN n 1 7 LEU n 1 8 GLU n 1 9 LYS n 1 10 LYS n 1 11 LEU n 1 12 GLY n 1 13 TYR n 1 14 THR n 1 15 PHE n 1 16 LYS n 1 17 ASP n 1 18 LYS n 1 19 SER n 1 20 LEU n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 ALA n 1 25 LEU n 1 26 THR n 1 27 HIS n 1 28 VAL n 1 29 SER n 1 30 TYR n 1 31 SER n 1 32 LYS n 1 33 LYS n 1 34 GLU n 1 35 HIS n 1 36 TYR n 1 37 GLU n 1 38 THR n 1 39 LEU n 1 40 GLU n 1 41 PHE n 1 42 LEU n 1 43 GLY n 1 44 ASP n 1 45 ALA n 1 46 LEU n 1 47 VAL n 1 48 ASN n 1 49 PHE n 1 50 PHE n 1 51 ILE n 1 52 VAL n 1 53 ASP n 1 54 LEU n 1 55 LEU n 1 56 VAL n 1 57 GLN n 1 58 TYR n 1 59 SER n 1 60 PRO n 1 61 ASN n 1 62 LYS n 1 63 ARG n 1 64 GLU n 1 65 GLY n 1 66 PHE n 1 67 LEU n 1 68 SER n 1 69 PRO n 1 70 LEU n 1 71 LYS n 1 72 ALA n 1 73 TYR n 1 74 LEU n 1 75 ILE n 1 76 SER n 1 77 GLU n 1 78 GLU n 1 79 PHE n 1 80 PHE n 1 81 ASN n 1 82 LEU n 1 83 LEU n 1 84 ALA n 1 85 GLN n 1 86 LYS n 1 87 LEU n 1 88 GLU n 1 89 LEU n 1 90 HIS n 1 91 LYS n 1 92 PHE n 1 93 ILE n 1 94 ARG n 1 95 ILE n 1 96 LYS n 1 97 ARG n 1 98 GLY n 1 99 LYS n 1 100 ILE n 1 101 ASN n 1 102 GLU n 1 103 THR n 1 104 ILE n 1 105 ILE n 1 106 GLY n 1 107 ASP n 1 108 VAL n 1 109 PHE n 1 110 GLU n 1 111 ALA n 1 112 LEU n 1 113 TRP n 1 114 ALA n 1 115 ALA n 1 116 VAL n 1 117 TYR n 1 118 ILE n 1 119 ASP n 1 120 SER n 1 121 GLY n 1 122 ARG n 1 123 ASP n 1 124 ALA n 1 125 ASN n 1 126 PHE n 1 127 THR n 1 128 ARG n 1 129 GLU n 1 130 LEU n 1 131 PHE n 1 132 TYR n 1 133 LYS n 1 134 LEU n 1 135 PHE n 1 136 LYS n 1 137 GLU n 1 138 ASP n 1 139 ILE n 1 140 LEU n 1 141 SER n 1 142 ALA n 1 143 ILE n 1 144 LYS n 1 145 GLU n 1 146 GLY n 1 147 ARG n 1 148 VAL n 1 149 LYS n 1 150 LYS n 1 151 ASP n 1 152 TYR n 1 153 LYS n 1 154 THR n 1 155 ILE n 1 156 LEU n 1 157 GLN n 1 158 GLU n 1 159 ILE n 1 160 THR n 1 161 GLN n 1 162 LYS n 1 163 ARG n 1 164 TRP n 1 165 LYS n 1 166 GLU n 1 167 ARG n 1 168 PRO n 1 169 GLU n 1 170 TYR n 1 171 ARG n 1 172 LEU n 1 173 ILE n 1 174 SER n 1 175 VAL n 1 176 GLU n 1 177 GLY n 1 178 PRO n 1 179 HIS n 1 180 HIS n 1 181 LYS n 1 182 LYS n 1 183 LYS n 1 184 PHE n 1 185 ILE n 1 186 VAL n 1 187 GLU n 1 188 ALA n 1 189 LYS n 1 190 ILE n 1 191 LYS n 1 192 GLU n 1 193 TYR n 1 194 ARG n 1 195 THR n 1 196 LEU n 1 197 GLY n 1 198 GLU n 1 199 GLY n 1 200 LYS n 1 201 SER n 1 202 LYS n 1 203 LYS n 1 204 GLU n 1 205 ALA n 1 206 GLU n 1 207 GLN n 1 208 ARG n 1 209 ALA n 1 210 ALA n 1 211 GLU n 1 212 GLU n 1 213 LEU n 1 214 ILE n 1 215 LYS n 1 216 LEU n 1 217 LEU n 1 218 GLU n 1 219 GLU n 1 220 SER n 1 221 GLU n 2 1 A n 2 2 A n 2 3 G n 2 4 G n 2 5 U n 2 6 C n 2 7 A n 2 8 U n 2 9 U n 2 10 C n 2 11 G n 2 12 C n 2 13 A n 2 14 A n 2 15 G n 2 16 A n 2 17 G n 2 18 U n 2 19 G n 2 20 G n 2 21 C n 2 22 C n 2 23 U n 2 24 U n 2 25 G n 2 26 C n 2 27 G n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'aq_946, rnc' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain VF5 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Aquifex aeolicus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 224324 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3) CodonPlus-RIL' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pHPK1409 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Cleavage product of a R1.1 RNA derivative' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP RNC_AQUAE O67082 1 ;MKMLEQLEKKLGYTFKDKSLLEKALTHVSYSKKEHYETLEFLGDALVNFFIVDLLVQYSPNKREGFLSPLKAYLISEEFF NLLAQKLELHKFIRIKRGKINETIIGDVFEALWAAVYIDSGRDANFTRELFYKLFKEDILSAIKEGRVKKDYKTILQEIT QKRWKERPEYRLISVEGPHHKKKFIVEAKIKEYRTLGEGKSKKEAEQRAAEELIKLLEESE ; 1 ? 2 PDB 4M2Z 4M2Z 2 AAGGUCAUUCGCAAGAGUGGCCUUGCG ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4M2Z A 1 ? 221 ? O67082 1 ? 221 ? 1 221 2 1 4M2Z B 1 ? 221 ? O67082 1 ? 221 ? 1 221 3 2 4M2Z C 1 ? 27 ? 4M2Z 2 ? 28 ? 2 28 4 2 4M2Z D 1 ? 27 ? 4M2Z 2 ? 28 ? 2 28 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4M2Z _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.05 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 59.69 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '70% (v/v) MPD in 0.1 M HEPES, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2006-03-08 _diffrn_detector.details mirror # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.0 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.0 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID # _reflns.entry_id 4M2Z _reflns.d_resolution_high 2.850 _reflns.d_resolution_low 30.000 _reflns.number_obs ? _reflns.pdbx_Rmerge_I_obs 0.064 _reflns.pdbx_netI_over_sigmaI 23.100 _reflns.pdbx_chi_squared 1.000 _reflns.pdbx_redundancy 4.600 _reflns.percent_possible_obs 89.900 _reflns.B_iso_Wilson_estimate 97.180 _reflns.observed_criterion_sigma_F 0 _reflns.observed_criterion_sigma_I 0 _reflns.number_all 18510 _reflns.pdbx_Rsym_value ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.850 2.950 ? ? ? 0.304 1.86 ? 0.662 2.100 ? 1509 75.200 1 1 2.950 3.070 ? ? ? 0.254 2.76 ? 0.788 2.800 ? 1782 88.100 2 1 3.070 3.210 ? ? ? 0.270 4.18 ? 1.057 3.900 ? 1933 95.600 3 1 3.210 3.380 ? ? ? 0.240 5.74 ? 1.031 4.700 ? 1965 97.200 4 1 3.380 3.590 ? ? ? 0.187 5.92 ? 1.058 4.000 ? 1682 83.400 5 1 3.590 3.870 ? ? ? 0.130 8.34 ? 1.006 4.300 ? 1797 87.400 6 1 3.870 4.250 ? ? ? 0.079 15.83 ? 1.009 5.400 ? 1858 90.400 7 1 4.250 4.870 ? ? ? 0.060 24.25 ? 1.023 6.100 ? 1988 97.300 8 1 4.870 6.120 ? ? ? 0.052 27.87 ? 1.028 6.300 ? 2061 97.800 9 1 6.120 30.000 ? ? ? 0.045 25.97 ? 0.976 5.500 ? 1935 86.800 10 1 # _refine.entry_id 4M2Z _refine.ls_d_res_high 2.8500 _refine.ls_d_res_low 29.1100 _refine.pdbx_ls_sigma_F 1.460 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 90.0700 _refine.ls_number_reflns_obs 18666 _refine.ls_number_reflns_all 20724 _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details random _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2244 _refine.ls_R_factor_R_work 0.2213 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2887 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.5900 _refine.ls_number_reflns_R_free 857 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 116.7758 _refine.solvent_model_param_bsol 87.9760 _refine.solvent_model_param_ksol 0.3520 _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 5.8512 _refine.aniso_B[2][2] 5.8512 _refine.aniso_B[3][3] -11.7024 _refine.aniso_B[1][2] -0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.3200 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.0000 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.7300 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'FOURIER SYNTHESIS' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 197.010 _refine.B_iso_min 62.760 _refine.pdbx_overall_phase_error 32.6600 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3659 _refine_hist.pdbx_number_atoms_nucleic_acid 1160 _refine_hist.pdbx_number_atoms_ligand 48 _refine_hist.number_atoms_solvent 22 _refine_hist.number_atoms_total 4889 _refine_hist.d_res_high 2.8500 _refine_hist.d_res_low 29.1100 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 5094 0.003 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 7077 0.698 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 820 0.058 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 679 0.003 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 2113 14.699 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 2.8500 3.0287 6 79.0000 2570 . 0.3119 0.3671 . 113 . 2683 2570 . 'X-RAY DIFFRACTION' 3.0287 3.2622 6 95.0000 3104 . 0.2621 0.3180 . 153 . 3257 3104 . 'X-RAY DIFFRACTION' 3.2622 3.5900 6 89.0000 2868 . 0.2836 0.3587 . 136 . 3004 2868 . 'X-RAY DIFFRACTION' 3.5900 4.1082 6 87.0000 2861 . 0.2564 0.3668 . 140 . 3001 2861 . 'X-RAY DIFFRACTION' 4.1082 5.1712 6 97.0000 3226 . 0.1779 0.2548 . 158 . 3384 3226 . 'X-RAY DIFFRACTION' 5.1712 29.1118 6 92.0000 3180 . 0.2070 0.2531 . 157 . 3337 3180 . 'X-RAY DIFFRACTION' # _struct.entry_id 4M2Z _struct.title 'Crystal structure of RNASE III complexed with double-stranded RNA and CMP (TYPE II CLEAVAGE)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4M2Z _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text 'RNase III, Hydrolase, dsRNA, RNA binding, RNA processing, HYDROLASE-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 4 ? J N N 3 ? K N N 3 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 4 ? GLY A 12 ? LEU A 4 GLY A 12 1 ? 9 HELX_P HELX_P2 2 ASP A 17 ? THR A 26 ? ASP A 17 THR A 26 1 ? 10 HELX_P HELX_P3 3 TYR A 36 ? SER A 59 ? TYR A 36 SER A 59 1 ? 24 HELX_P HELX_P4 4 ARG A 63 ? ILE A 75 ? ARG A 63 ILE A 75 1 ? 13 HELX_P HELX_P5 5 SER A 76 ? GLU A 88 ? SER A 76 GLU A 88 1 ? 13 HELX_P HELX_P6 6 LEU A 89 ? PHE A 92 ? LEU A 89 PHE A 92 5 ? 4 HELX_P HELX_P7 7 ASN A 101 ? SER A 120 ? ASN A 101 SER A 120 1 ? 20 HELX_P HELX_P8 8 ASP A 123 ? GLU A 145 ? ASP A 123 GLU A 145 1 ? 23 HELX_P HELX_P9 9 ASP A 151 ? TRP A 164 ? ASP A 151 TRP A 164 1 ? 14 HELX_P HELX_P10 10 SER A 201 ? GLU A 221 ? SER A 201 GLU A 221 1 ? 21 HELX_P HELX_P11 11 LEU B 4 ? GLY B 12 ? LEU B 4 GLY B 12 1 ? 9 HELX_P HELX_P12 12 ASP B 17 ? LEU B 25 ? ASP B 17 LEU B 25 1 ? 9 HELX_P HELX_P13 13 TYR B 36 ? SER B 59 ? TYR B 36 SER B 59 1 ? 24 HELX_P HELX_P14 14 ARG B 63 ? ILE B 75 ? ARG B 63 ILE B 75 1 ? 13 HELX_P HELX_P15 15 SER B 76 ? GLU B 88 ? SER B 76 GLU B 88 1 ? 13 HELX_P HELX_P16 16 LEU B 89 ? PHE B 92 ? LEU B 89 PHE B 92 5 ? 4 HELX_P HELX_P17 17 ASN B 101 ? SER B 120 ? ASN B 101 SER B 120 1 ? 20 HELX_P HELX_P18 18 ASP B 123 ? GLU B 145 ? ASP B 123 GLU B 145 1 ? 23 HELX_P HELX_P19 19 ASP B 151 ? TRP B 164 ? ASP B 151 TRP B 164 1 ? 14 HELX_P HELX_P20 20 SER B 201 ? LEU B 217 ? SER B 201 LEU B 217 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A ASP 44 OD2 ? ? ? 1_555 E MG . MG ? ? A ASP 44 A MG 501 1_555 ? ? ? ? ? ? ? 1.991 ? ? metalc2 metalc ? ? A GLU 110 OE1 ? ? ? 1_555 E MG . MG ? ? A GLU 110 A MG 501 1_555 ? ? ? ? ? ? ? 2.087 ? ? metalc3 metalc ? ? A GLU 110 OE2 ? ? ? 1_555 E MG . MG ? ? A GLU 110 A MG 501 1_555 ? ? ? ? ? ? ? 2.950 ? ? metalc4 metalc ? ? E MG . MG ? ? ? 1_555 M HOH . O ? ? A MG 501 A HOH 601 1_555 ? ? ? ? ? ? ? 1.989 ? ? metalc5 metalc ? ? E MG . MG ? ? ? 1_555 I C . OP1 ? ? A MG 501 C C 103 1_555 ? ? ? ? ? ? ? 1.977 ? ? metalc6 metalc ? ? E MG . MG ? ? ? 1_555 D G 27 "O3'" ? ? A MG 501 D G 28 1_555 ? ? ? ? ? ? ? 2.096 ? ? metalc7 metalc ? ? E MG . MG ? ? ? 1_555 P HOH . O ? ? A MG 501 D HOH 205 1_555 ? ? ? ? ? ? ? 2.001 ? ? metalc8 metalc ? ? M HOH . O ? ? ? 1_555 G MG . MG ? ? A HOH 606 C MG 101 1_555 ? ? ? ? ? ? ? 2.067 ? ? metalc9 metalc ? ? B ASP 44 OD2 ? ? ? 1_555 F MG . MG ? ? B ASP 44 B MG 301 1_555 ? ? ? ? ? ? ? 2.007 ? ? metalc10 metalc ? ? B ASP 44 OD1 ? ? ? 1_555 F MG . MG ? ? B ASP 44 B MG 301 1_555 ? ? ? ? ? ? ? 2.627 ? ? metalc11 metalc ? ? B GLU 110 OE2 ? ? ? 1_555 F MG . MG ? ? B GLU 110 B MG 301 1_555 ? ? ? ? ? ? ? 2.027 ? ? metalc12 metalc ? ? F MG . MG ? ? ? 1_555 N HOH . O ? ? B MG 301 B HOH 402 1_555 ? ? ? ? ? ? ? 2.026 ? ? metalc13 metalc ? ? F MG . MG ? ? ? 1_555 C G 27 "O3'" ? ? B MG 301 C G 28 1_555 ? ? ? ? ? ? ? 2.037 ? ? metalc14 metalc ? ? F MG . MG ? ? ? 1_555 L C . OP1 ? ? B MG 301 D C 103 1_555 ? ? ? ? ? ? ? 1.992 ? ? metalc15 metalc ? ? F MG . MG ? ? ? 1_555 P HOH . O ? ? B MG 301 D HOH 206 1_555 ? ? ? ? ? ? ? 2.023 ? ? metalc16 metalc ? ? N HOH . O ? ? ? 1_555 J MG . MG ? ? B HOH 403 D MG 101 1_555 ? ? ? ? ? ? ? 2.001 ? ? metalc17 metalc ? ? C A 1 OP1 ? ? ? 1_555 G MG . MG ? ? C A 2 C MG 101 1_555 ? ? ? ? ? ? ? 2.004 ? ? metalc18 metalc ? ? C A 1 OP2 ? ? ? 1_555 H MG . MG ? ? C A 2 C MG 102 1_555 ? ? ? ? ? ? ? 2.010 ? ? metalc19 metalc ? ? C A 2 OP2 ? ? ? 1_555 H MG . MG ? ? C A 3 C MG 102 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc20 metalc ? ? G MG . MG ? ? ? 1_555 O HOH . O ? ? C MG 101 C HOH 204 1_555 ? ? ? ? ? ? ? 2.143 ? ? metalc21 metalc ? ? G MG . MG ? ? ? 1_555 O HOH . O ? ? C MG 101 C HOH 205 1_555 ? ? ? ? ? ? ? 2.016 ? ? metalc22 metalc ? ? D A 1 OP1 ? ? ? 1_555 J MG . MG ? ? D A 2 D MG 101 1_555 ? ? ? ? ? ? ? 1.997 ? ? metalc23 metalc ? ? D A 1 OP2 ? ? ? 1_555 K MG . MG ? ? D A 2 D MG 102 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc24 metalc ? ? D A 2 OP2 ? ? ? 1_555 K MG . MG ? ? D A 3 D MG 102 1_555 ? ? ? ? ? ? ? 2.006 ? ? metalc25 metalc ? ? J MG . MG ? ? ? 1_555 P HOH . O ? ? D MG 101 D HOH 207 1_555 ? ? ? ? ? ? ? 2.009 ? ? metalc26 metalc ? ? J MG . MG ? ? ? 1_555 P HOH . O ? ? D MG 101 D HOH 208 1_555 ? ? ? ? ? ? ? 2.013 ? ? hydrog1 hydrog ? ? C A 1 N1 ? ? ? 1_555 C U 24 N3 ? ? C A 2 C U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C A 1 N6 ? ? ? 1_555 C U 24 O4 ? ? C A 2 C U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C A 2 N1 ? ? ? 1_555 C U 23 N3 ? ? C A 3 C U 24 1_555 ? ? ? ? ? ? 'A-U PAIR' ? ? ? hydrog4 hydrog ? ? C G 3 N1 ? ? ? 1_555 C C 22 N3 ? ? C G 4 C C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C G 3 N2 ? ? ? 1_555 C C 22 O2 ? ? C G 4 C C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C G 3 O6 ? ? ? 1_555 C C 22 N4 ? ? C G 4 C C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C G 4 N1 ? ? ? 1_555 C C 21 N3 ? ? C G 5 C C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C G 4 N2 ? ? ? 1_555 C C 21 O2 ? ? C G 5 C C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C G 4 O6 ? ? ? 1_555 C C 21 N4 ? ? C G 5 C C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C U 5 N3 ? ? ? 1_555 C G 20 O6 ? ? C U 6 C G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog11 hydrog ? ? C U 5 O2 ? ? ? 1_555 C G 20 N1 ? ? C U 6 C G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog12 hydrog ? ? C C 6 N3 ? ? ? 1_555 C G 19 N1 ? ? C C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C C 6 N4 ? ? ? 1_555 C G 19 O6 ? ? C C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C C 6 O2 ? ? ? 1_555 C G 19 N2 ? ? C C 7 C G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C A 7 N6 ? ? ? 1_555 C G 17 O6 ? ? C A 8 C G 18 1_555 ? ? ? ? ? ? 'A-G MISPAIR' ? ? ? hydrog16 hydrog ? ? C A 7 N1 ? ? ? 1_555 C U 18 N3 ? ? C A 8 C U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? C A 7 N6 ? ? ? 1_555 C U 18 O4 ? ? C A 8 C U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C U 8 N3 ? ? ? 1_555 C G 17 O6 ? ? C U 9 C G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog19 hydrog ? ? C U 8 O2 ? ? ? 1_555 C G 17 N1 ? ? C U 9 C G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog20 hydrog ? ? C U 9 N3 ? ? ? 1_555 C A 16 N1 ? ? C U 10 C A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C U 9 O4 ? ? ? 1_555 C A 16 N6 ? ? C U 10 C A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C C 10 N3 ? ? ? 1_555 C G 15 N1 ? ? C C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C C 10 N4 ? ? ? 1_555 C G 15 O6 ? ? C C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C C 10 O2 ? ? ? 1_555 C G 15 N2 ? ? C C 11 C G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C C 26 N3 ? ? ? 1_555 D G 27 N1 ? ? C C 27 D G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C C 26 N4 ? ? ? 1_555 D G 27 O6 ? ? C C 27 D G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C C 26 O2 ? ? ? 1_555 D G 27 N2 ? ? C C 27 D G 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C G 27 N1 ? ? ? 1_555 D C 26 N3 ? ? C G 28 D C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C G 27 N2 ? ? ? 1_555 D C 26 O2 ? ? C G 28 D C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C G 27 O6 ? ? ? 1_555 D C 26 N4 ? ? C G 28 D C 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? D A 1 N1 ? ? ? 1_555 D U 24 N3 ? ? D A 2 D U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? D A 1 N6 ? ? ? 1_555 D U 24 O4 ? ? D A 2 D U 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? D A 2 N1 ? ? ? 1_555 D U 23 N3 ? ? D A 3 D U 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? D A 2 N6 ? ? ? 1_555 D U 23 O4 ? ? D A 3 D U 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? D G 3 N1 ? ? ? 1_555 D C 22 N3 ? ? D G 4 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? D G 3 N2 ? ? ? 1_555 D C 22 O2 ? ? D G 4 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? D G 3 O6 ? ? ? 1_555 D C 22 N4 ? ? D G 4 D C 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? D G 4 N1 ? ? ? 1_555 D C 21 N3 ? ? D G 5 D C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? D G 4 N2 ? ? ? 1_555 D C 21 O2 ? ? D G 5 D C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? D G 4 O6 ? ? ? 1_555 D C 21 N4 ? ? D G 5 D C 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? D U 5 N3 ? ? ? 1_555 D G 20 O6 ? ? D U 6 D G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog42 hydrog ? ? D U 5 O2 ? ? ? 1_555 D G 20 N1 ? ? D U 6 D G 21 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog43 hydrog ? ? D C 6 N3 ? ? ? 1_555 D G 19 N1 ? ? D C 7 D G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? D C 6 N4 ? ? ? 1_555 D G 19 O6 ? ? D C 7 D G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? D C 6 O2 ? ? ? 1_555 D G 19 N2 ? ? D C 7 D G 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? D A 7 N1 ? ? ? 1_555 D U 18 N3 ? ? D A 8 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? D A 7 N6 ? ? ? 1_555 D U 18 O4 ? ? D A 8 D U 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? D U 8 N3 ? ? ? 1_555 D G 17 O6 ? ? D U 9 D G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog49 hydrog ? ? D U 8 O2 ? ? ? 1_555 D G 17 N1 ? ? D U 9 D G 18 1_555 ? ? ? ? ? ? TYPE_28_PAIR ? ? ? hydrog50 hydrog ? ? D U 9 N3 ? ? ? 1_555 D A 16 N1 ? ? D U 10 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? D U 9 O4 ? ? ? 1_555 D A 16 N6 ? ? D U 10 D A 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? D C 10 N3 ? ? ? 1_555 D G 15 N1 ? ? D C 11 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? D C 10 N4 ? ? ? 1_555 D G 15 O6 ? ? D C 11 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? D C 10 O2 ? ? ? 1_555 D G 15 N2 ? ? D C 11 D G 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 169 ? GLU A 176 ? GLU A 169 GLU A 176 A 2 LYS A 183 ? ILE A 190 ? LYS A 183 ILE A 190 A 3 TYR A 193 ? THR A 195 ? TYR A 193 THR A 195 B 1 GLU A 169 ? GLU A 176 ? GLU A 169 GLU A 176 B 2 LYS A 183 ? ILE A 190 ? LYS A 183 ILE A 190 B 3 GLU A 198 ? GLY A 199 ? GLU A 198 GLY A 199 C 1 GLU B 169 ? GLU B 176 ? GLU B 169 GLU B 176 C 2 LYS B 183 ? ILE B 190 ? LYS B 183 ILE B 190 C 3 TYR B 193 ? GLY B 199 ? TYR B 193 GLY B 199 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 171 ? N ARG A 171 O GLU A 187 ? O GLU A 187 A 2 3 N ILE A 190 ? N ILE A 190 O TYR A 193 ? O TYR A 193 B 1 2 N ARG A 171 ? N ARG A 171 O GLU A 187 ? O GLU A 187 B 2 3 N PHE A 184 ? N PHE A 184 O GLY A 199 ? O GLY A 199 C 1 2 N GLU B 176 ? N GLU B 176 O LYS B 183 ? O LYS B 183 C 2 3 N ILE B 190 ? N ILE B 190 O TYR B 193 ? O TYR B 193 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MG 501 ? 6 'BINDING SITE FOR RESIDUE MG A 501' AC2 Software B MG 301 ? 6 'BINDING SITE FOR RESIDUE MG B 301' AC3 Software C MG 101 ? 5 'BINDING SITE FOR RESIDUE MG C 101' AC4 Software C MG 102 ? 2 'BINDING SITE FOR RESIDUE MG C 102' AC5 Software C C 103 ? 13 'BINDING SITE FOR RESIDUE C C 103' AC6 Software D MG 101 ? 5 'BINDING SITE FOR RESIDUE MG D 101' AC7 Software D MG 102 ? 2 'BINDING SITE FOR RESIDUE MG D 102' AC8 Software D C 103 ? 14 'BINDING SITE FOR RESIDUE C D 103' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ASP A 44 ? ASP A 44 . ? 1_555 ? 2 AC1 6 GLU A 110 ? GLU A 110 . ? 1_555 ? 3 AC1 6 HOH M . ? HOH A 601 . ? 1_555 ? 4 AC1 6 C I . ? C C 103 . ? 1_555 ? 5 AC1 6 G D 27 ? G D 28 . ? 1_555 ? 6 AC1 6 HOH P . ? HOH D 205 . ? 1_555 ? 7 AC2 6 ASP B 44 ? ASP B 44 . ? 1_555 ? 8 AC2 6 GLU B 110 ? GLU B 110 . ? 1_555 ? 9 AC2 6 HOH N . ? HOH B 402 . ? 1_555 ? 10 AC2 6 G C 27 ? G C 28 . ? 1_555 ? 11 AC2 6 C L . ? C D 103 . ? 1_555 ? 12 AC2 6 HOH P . ? HOH D 206 . ? 1_555 ? 13 AC3 5 HOH M . ? HOH A 606 . ? 1_555 ? 14 AC3 5 GLU B 64 ? GLU B 64 . ? 1_555 ? 15 AC3 5 A C 1 ? A C 2 . ? 1_555 ? 16 AC3 5 HOH O . ? HOH C 204 . ? 1_555 ? 17 AC3 5 HOH O . ? HOH C 205 . ? 1_555 ? 18 AC4 2 A C 1 ? A C 2 . ? 1_555 ? 19 AC4 2 A C 2 ? A C 3 . ? 1_555 ? 20 AC5 13 GLU A 40 ? GLU A 40 . ? 1_555 ? 21 AC5 13 PHE A 41 ? PHE A 41 . ? 1_555 ? 22 AC5 13 ASP A 44 ? ASP A 44 . ? 1_555 ? 23 AC5 13 GLU A 110 ? GLU A 110 . ? 1_555 ? 24 AC5 13 MG E . ? MG A 501 . ? 1_555 ? 25 AC5 13 GLU B 64 ? GLU B 64 . ? 1_555 ? 26 AC5 13 SER B 68 ? SER B 68 . ? 1_555 ? 27 AC5 13 LYS B 71 ? LYS B 71 . ? 1_555 ? 28 AC5 13 A C 1 ? A C 2 . ? 1_555 ? 29 AC5 13 G C 25 ? G C 26 . ? 1_555 ? 30 AC5 13 C C 26 ? C C 27 . ? 1_555 ? 31 AC5 13 HOH O . ? HOH C 204 . ? 1_555 ? 32 AC5 13 G D 27 ? G D 28 . ? 1_555 ? 33 AC6 5 GLU A 64 ? GLU A 64 . ? 1_555 ? 34 AC6 5 HOH N . ? HOH B 403 . ? 1_555 ? 35 AC6 5 A D 1 ? A D 2 . ? 1_555 ? 36 AC6 5 HOH P . ? HOH D 207 . ? 1_555 ? 37 AC6 5 HOH P . ? HOH D 208 . ? 1_555 ? 38 AC7 2 A D 1 ? A D 2 . ? 1_555 ? 39 AC7 2 A D 2 ? A D 3 . ? 1_555 ? 40 AC8 14 GLU A 64 ? GLU A 64 . ? 1_555 ? 41 AC8 14 SER A 68 ? SER A 68 . ? 1_555 ? 42 AC8 14 LYS A 71 ? LYS A 71 . ? 1_555 ? 43 AC8 14 GLU B 40 ? GLU B 40 . ? 1_555 ? 44 AC8 14 PHE B 41 ? PHE B 41 . ? 1_555 ? 45 AC8 14 ASP B 44 ? ASP B 44 . ? 1_555 ? 46 AC8 14 GLU B 110 ? GLU B 110 . ? 1_555 ? 47 AC8 14 MG F . ? MG B 301 . ? 1_555 ? 48 AC8 14 G C 27 ? G C 28 . ? 1_555 ? 49 AC8 14 A D 1 ? A D 2 . ? 1_555 ? 50 AC8 14 G D 25 ? G D 26 . ? 1_555 ? 51 AC8 14 C D 26 ? C D 27 . ? 1_555 ? 52 AC8 14 HOH P . ? HOH D 206 . ? 1_555 ? 53 AC8 14 HOH P . ? HOH D 207 . ? 1_555 ? # _atom_sites.entry_id 4M2Z _atom_sites.fract_transf_matrix[1][1] 0.012326 _atom_sites.fract_transf_matrix[1][2] 0.007116 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014233 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004466 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 LEU 4 4 4 LEU LEU A . n A 1 5 GLU 5 5 5 GLU GLU A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 GLU 8 8 8 GLU GLU A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 LYS 10 10 10 LYS LYS A . n A 1 11 LEU 11 11 11 LEU LEU A . n A 1 12 GLY 12 12 12 GLY GLY A . n A 1 13 TYR 13 13 13 TYR TYR A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 PHE 15 15 15 PHE PHE A . n A 1 16 LYS 16 16 16 LYS LYS A . n A 1 17 ASP 17 17 17 ASP ASP A . n A 1 18 LYS 18 18 18 LYS LYS A . n A 1 19 SER 19 19 19 SER SER A . n A 1 20 LEU 20 20 20 LEU LEU A . n A 1 21 LEU 21 21 21 LEU LEU A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LYS 23 23 23 LYS LYS A . n A 1 24 ALA 24 24 24 ALA ALA A . n A 1 25 LEU 25 25 25 LEU LEU A . n A 1 26 THR 26 26 26 THR THR A . n A 1 27 HIS 27 27 27 HIS HIS A . n A 1 28 VAL 28 28 28 VAL VAL A . n A 1 29 SER 29 29 29 SER SER A . n A 1 30 TYR 30 30 30 TYR TYR A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 LYS 32 32 32 LYS LYS A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 HIS 35 35 35 HIS HIS A . n A 1 36 TYR 36 36 36 TYR TYR A . n A 1 37 GLU 37 37 37 GLU GLU A . n A 1 38 THR 38 38 38 THR THR A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 PHE 41 41 41 PHE PHE A . n A 1 42 LEU 42 42 42 LEU LEU A . n A 1 43 GLY 43 43 43 GLY GLY A . n A 1 44 ASP 44 44 44 ASP ASP A . n A 1 45 ALA 45 45 45 ALA ALA A . n A 1 46 LEU 46 46 46 LEU LEU A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 ASN 48 48 48 ASN ASN A . n A 1 49 PHE 49 49 49 PHE PHE A . n A 1 50 PHE 50 50 50 PHE PHE A . n A 1 51 ILE 51 51 51 ILE ILE A . n A 1 52 VAL 52 52 52 VAL VAL A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 GLN 57 57 57 GLN GLN A . n A 1 58 TYR 58 58 58 TYR TYR A . n A 1 59 SER 59 59 59 SER SER A . n A 1 60 PRO 60 60 60 PRO PRO A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LYS 62 62 62 LYS LYS A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 GLY 65 65 65 GLY GLY A . n A 1 66 PHE 66 66 66 PHE PHE A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 SER 68 68 68 SER SER A . n A 1 69 PRO 69 69 69 PRO PRO A . n A 1 70 LEU 70 70 70 LEU LEU A . n A 1 71 LYS 71 71 71 LYS LYS A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 TYR 73 73 73 TYR TYR A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ILE 75 75 75 ILE ILE A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 GLU 77 77 77 GLU GLU A . n A 1 78 GLU 78 78 78 GLU GLU A . n A 1 79 PHE 79 79 79 PHE PHE A . n A 1 80 PHE 80 80 80 PHE PHE A . n A 1 81 ASN 81 81 81 ASN ASN A . n A 1 82 LEU 82 82 82 LEU LEU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 ALA 84 84 84 ALA ALA A . n A 1 85 GLN 85 85 85 GLN GLN A . n A 1 86 LYS 86 86 86 LYS LYS A . n A 1 87 LEU 87 87 87 LEU LEU A . n A 1 88 GLU 88 88 88 GLU GLU A . n A 1 89 LEU 89 89 89 LEU LEU A . n A 1 90 HIS 90 90 90 HIS HIS A . n A 1 91 LYS 91 91 91 LYS LYS A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 ILE 93 93 93 ILE ILE A . n A 1 94 ARG 94 94 94 ARG ARG A . n A 1 95 ILE 95 95 95 ILE ILE A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 ARG 97 97 97 ARG ARG A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 LYS 99 99 99 LYS LYS A . n A 1 100 ILE 100 100 100 ILE ILE A . n A 1 101 ASN 101 101 101 ASN ASN A . n A 1 102 GLU 102 102 102 GLU GLU A . n A 1 103 THR 103 103 103 THR THR A . n A 1 104 ILE 104 104 104 ILE ILE A . n A 1 105 ILE 105 105 105 ILE ILE A . n A 1 106 GLY 106 106 106 GLY GLY A . n A 1 107 ASP 107 107 107 ASP ASP A . n A 1 108 VAL 108 108 108 VAL VAL A . n A 1 109 PHE 109 109 109 PHE PHE A . n A 1 110 GLU 110 110 110 GLU GLU A . n A 1 111 ALA 111 111 111 ALA ALA A . n A 1 112 LEU 112 112 112 LEU LEU A . n A 1 113 TRP 113 113 113 TRP TRP A . n A 1 114 ALA 114 114 114 ALA ALA A . n A 1 115 ALA 115 115 115 ALA ALA A . n A 1 116 VAL 116 116 116 VAL VAL A . n A 1 117 TYR 117 117 117 TYR TYR A . n A 1 118 ILE 118 118 118 ILE ILE A . n A 1 119 ASP 119 119 119 ASP ASP A . n A 1 120 SER 120 120 120 SER SER A . n A 1 121 GLY 121 121 121 GLY GLY A . n A 1 122 ARG 122 122 122 ARG ARG A . n A 1 123 ASP 123 123 123 ASP ASP A . n A 1 124 ALA 124 124 124 ALA ALA A . n A 1 125 ASN 125 125 125 ASN ASN A . n A 1 126 PHE 126 126 126 PHE PHE A . n A 1 127 THR 127 127 127 THR THR A . n A 1 128 ARG 128 128 128 ARG ARG A . n A 1 129 GLU 129 129 129 GLU GLU A . n A 1 130 LEU 130 130 130 LEU LEU A . n A 1 131 PHE 131 131 131 PHE PHE A . n A 1 132 TYR 132 132 132 TYR TYR A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 GLU 137 137 137 GLU GLU A . n A 1 138 ASP 138 138 138 ASP ASP A . n A 1 139 ILE 139 139 139 ILE ILE A . n A 1 140 LEU 140 140 140 LEU LEU A . n A 1 141 SER 141 141 141 SER SER A . n A 1 142 ALA 142 142 142 ALA ALA A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 LYS 144 144 144 LYS LYS A . n A 1 145 GLU 145 145 145 GLU GLU A . n A 1 146 GLY 146 146 146 GLY GLY A . n A 1 147 ARG 147 147 147 ARG ARG A . n A 1 148 VAL 148 148 148 VAL VAL A . n A 1 149 LYS 149 149 149 LYS LYS A . n A 1 150 LYS 150 150 150 LYS LYS A . n A 1 151 ASP 151 151 151 ASP ASP A . n A 1 152 TYR 152 152 152 TYR TYR A . n A 1 153 LYS 153 153 153 LYS LYS A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 LEU 156 156 156 LEU LEU A . n A 1 157 GLN 157 157 157 GLN GLN A . n A 1 158 GLU 158 158 158 GLU GLU A . n A 1 159 ILE 159 159 159 ILE ILE A . n A 1 160 THR 160 160 160 THR THR A . n A 1 161 GLN 161 161 161 GLN GLN A . n A 1 162 LYS 162 162 162 LYS LYS A . n A 1 163 ARG 163 163 163 ARG ARG A . n A 1 164 TRP 164 164 164 TRP TRP A . n A 1 165 LYS 165 165 165 LYS LYS A . n A 1 166 GLU 166 166 166 GLU GLU A . n A 1 167 ARG 167 167 167 ARG ARG A . n A 1 168 PRO 168 168 168 PRO PRO A . n A 1 169 GLU 169 169 169 GLU GLU A . n A 1 170 TYR 170 170 170 TYR TYR A . n A 1 171 ARG 171 171 171 ARG ARG A . n A 1 172 LEU 172 172 172 LEU LEU A . n A 1 173 ILE 173 173 173 ILE ILE A . n A 1 174 SER 174 174 174 SER SER A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 GLU 176 176 176 GLU GLU A . n A 1 177 GLY 177 177 177 GLY GLY A . n A 1 178 PRO 178 178 178 PRO PRO A . n A 1 179 HIS 179 179 179 HIS HIS A . n A 1 180 HIS 180 180 180 HIS HIS A . n A 1 181 LYS 181 181 181 LYS LYS A . n A 1 182 LYS 182 182 182 LYS LYS A . n A 1 183 LYS 183 183 183 LYS LYS A . n A 1 184 PHE 184 184 184 PHE PHE A . n A 1 185 ILE 185 185 185 ILE ILE A . n A 1 186 VAL 186 186 186 VAL VAL A . n A 1 187 GLU 187 187 187 GLU GLU A . n A 1 188 ALA 188 188 188 ALA ALA A . n A 1 189 LYS 189 189 189 LYS LYS A . n A 1 190 ILE 190 190 190 ILE ILE A . n A 1 191 LYS 191 191 191 LYS LYS A . n A 1 192 GLU 192 192 192 GLU GLU A . n A 1 193 TYR 193 193 193 TYR TYR A . n A 1 194 ARG 194 194 194 ARG ARG A . n A 1 195 THR 195 195 195 THR THR A . n A 1 196 LEU 196 196 196 LEU LEU A . n A 1 197 GLY 197 197 197 GLY GLY A . n A 1 198 GLU 198 198 198 GLU GLU A . n A 1 199 GLY 199 199 199 GLY GLY A . n A 1 200 LYS 200 200 200 LYS LYS A . n A 1 201 SER 201 201 201 SER SER A . n A 1 202 LYS 202 202 202 LYS LYS A . n A 1 203 LYS 203 203 203 LYS LYS A . n A 1 204 GLU 204 204 204 GLU GLU A . n A 1 205 ALA 205 205 205 ALA ALA A . n A 1 206 GLU 206 206 206 GLU GLU A . n A 1 207 GLN 207 207 207 GLN GLN A . n A 1 208 ARG 208 208 208 ARG ARG A . n A 1 209 ALA 209 209 209 ALA ALA A . n A 1 210 ALA 210 210 210 ALA ALA A . n A 1 211 GLU 211 211 211 GLU GLU A . n A 1 212 GLU 212 212 212 GLU GLU A . n A 1 213 LEU 213 213 213 LEU LEU A . n A 1 214 ILE 214 214 214 ILE ILE A . n A 1 215 LYS 215 215 215 LYS LYS A . n A 1 216 LEU 216 216 216 LEU LEU A . n A 1 217 LEU 217 217 217 LEU LEU A . n A 1 218 GLU 218 218 218 GLU GLU A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 SER 220 220 220 SER SER A . n A 1 221 GLU 221 221 221 GLU GLU A . n B 1 1 MET 1 1 ? ? ? B . n B 1 2 LYS 2 2 ? ? ? B . n B 1 3 MET 3 3 3 MET MET B . n B 1 4 LEU 4 4 4 LEU LEU B . n B 1 5 GLU 5 5 5 GLU GLU B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 LEU 7 7 7 LEU LEU B . n B 1 8 GLU 8 8 8 GLU GLU B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 LYS 10 10 10 LYS LYS B . n B 1 11 LEU 11 11 11 LEU LEU B . n B 1 12 GLY 12 12 12 GLY GLY B . n B 1 13 TYR 13 13 13 TYR TYR B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 PHE 15 15 15 PHE PHE B . n B 1 16 LYS 16 16 16 LYS LYS B . n B 1 17 ASP 17 17 17 ASP ASP B . n B 1 18 LYS 18 18 18 LYS LYS B . n B 1 19 SER 19 19 19 SER SER B . n B 1 20 LEU 20 20 20 LEU LEU B . n B 1 21 LEU 21 21 21 LEU LEU B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 LYS 23 23 23 LYS LYS B . n B 1 24 ALA 24 24 24 ALA ALA B . n B 1 25 LEU 25 25 25 LEU LEU B . n B 1 26 THR 26 26 26 THR THR B . n B 1 27 HIS 27 27 27 HIS HIS B . n B 1 28 VAL 28 28 28 VAL VAL B . n B 1 29 SER 29 29 29 SER SER B . n B 1 30 TYR 30 30 30 TYR TYR B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 LYS 32 32 32 LYS LYS B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 HIS 35 35 35 HIS HIS B . n B 1 36 TYR 36 36 36 TYR TYR B . n B 1 37 GLU 37 37 37 GLU GLU B . n B 1 38 THR 38 38 38 THR THR B . n B 1 39 LEU 39 39 39 LEU LEU B . n B 1 40 GLU 40 40 40 GLU GLU B . n B 1 41 PHE 41 41 41 PHE PHE B . n B 1 42 LEU 42 42 42 LEU LEU B . n B 1 43 GLY 43 43 43 GLY GLY B . n B 1 44 ASP 44 44 44 ASP ASP B . n B 1 45 ALA 45 45 45 ALA ALA B . n B 1 46 LEU 46 46 46 LEU LEU B . n B 1 47 VAL 47 47 47 VAL VAL B . n B 1 48 ASN 48 48 48 ASN ASN B . n B 1 49 PHE 49 49 49 PHE PHE B . n B 1 50 PHE 50 50 50 PHE PHE B . n B 1 51 ILE 51 51 51 ILE ILE B . n B 1 52 VAL 52 52 52 VAL VAL B . n B 1 53 ASP 53 53 53 ASP ASP B . n B 1 54 LEU 54 54 54 LEU LEU B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 GLN 57 57 57 GLN GLN B . n B 1 58 TYR 58 58 58 TYR TYR B . n B 1 59 SER 59 59 59 SER SER B . n B 1 60 PRO 60 60 60 PRO PRO B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 LYS 62 62 62 LYS LYS B . n B 1 63 ARG 63 63 63 ARG ARG B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 GLY 65 65 65 GLY GLY B . n B 1 66 PHE 66 66 66 PHE PHE B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 SER 68 68 68 SER SER B . n B 1 69 PRO 69 69 69 PRO PRO B . n B 1 70 LEU 70 70 70 LEU LEU B . n B 1 71 LYS 71 71 71 LYS LYS B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 TYR 73 73 73 TYR TYR B . n B 1 74 LEU 74 74 74 LEU LEU B . n B 1 75 ILE 75 75 75 ILE ILE B . n B 1 76 SER 76 76 76 SER SER B . n B 1 77 GLU 77 77 77 GLU GLU B . n B 1 78 GLU 78 78 78 GLU GLU B . n B 1 79 PHE 79 79 79 PHE PHE B . n B 1 80 PHE 80 80 80 PHE PHE B . n B 1 81 ASN 81 81 81 ASN ASN B . n B 1 82 LEU 82 82 82 LEU LEU B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 ALA 84 84 84 ALA ALA B . n B 1 85 GLN 85 85 85 GLN GLN B . n B 1 86 LYS 86 86 86 LYS LYS B . n B 1 87 LEU 87 87 87 LEU LEU B . n B 1 88 GLU 88 88 88 GLU GLU B . n B 1 89 LEU 89 89 89 LEU LEU B . n B 1 90 HIS 90 90 90 HIS HIS B . n B 1 91 LYS 91 91 91 LYS LYS B . n B 1 92 PHE 92 92 92 PHE PHE B . n B 1 93 ILE 93 93 93 ILE ILE B . n B 1 94 ARG 94 94 94 ARG ARG B . n B 1 95 ILE 95 95 95 ILE ILE B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 ARG 97 97 97 ARG ARG B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 LYS 99 99 99 LYS LYS B . n B 1 100 ILE 100 100 100 ILE ILE B . n B 1 101 ASN 101 101 101 ASN ASN B . n B 1 102 GLU 102 102 102 GLU GLU B . n B 1 103 THR 103 103 103 THR THR B . n B 1 104 ILE 104 104 104 ILE ILE B . n B 1 105 ILE 105 105 105 ILE ILE B . n B 1 106 GLY 106 106 106 GLY GLY B . n B 1 107 ASP 107 107 107 ASP ASP B . n B 1 108 VAL 108 108 108 VAL VAL B . n B 1 109 PHE 109 109 109 PHE PHE B . n B 1 110 GLU 110 110 110 GLU GLU B . n B 1 111 ALA 111 111 111 ALA ALA B . n B 1 112 LEU 112 112 112 LEU LEU B . n B 1 113 TRP 113 113 113 TRP TRP B . n B 1 114 ALA 114 114 114 ALA ALA B . n B 1 115 ALA 115 115 115 ALA ALA B . n B 1 116 VAL 116 116 116 VAL VAL B . n B 1 117 TYR 117 117 117 TYR TYR B . n B 1 118 ILE 118 118 118 ILE ILE B . n B 1 119 ASP 119 119 119 ASP ASP B . n B 1 120 SER 120 120 120 SER SER B . n B 1 121 GLY 121 121 121 GLY GLY B . n B 1 122 ARG 122 122 122 ARG ARG B . n B 1 123 ASP 123 123 123 ASP ASP B . n B 1 124 ALA 124 124 124 ALA ALA B . n B 1 125 ASN 125 125 125 ASN ASN B . n B 1 126 PHE 126 126 126 PHE PHE B . n B 1 127 THR 127 127 127 THR THR B . n B 1 128 ARG 128 128 128 ARG ARG B . n B 1 129 GLU 129 129 129 GLU GLU B . n B 1 130 LEU 130 130 130 LEU LEU B . n B 1 131 PHE 131 131 131 PHE PHE B . n B 1 132 TYR 132 132 132 TYR TYR B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 LEU 134 134 134 LEU LEU B . n B 1 135 PHE 135 135 135 PHE PHE B . n B 1 136 LYS 136 136 136 LYS LYS B . n B 1 137 GLU 137 137 137 GLU GLU B . n B 1 138 ASP 138 138 138 ASP ASP B . n B 1 139 ILE 139 139 139 ILE ILE B . n B 1 140 LEU 140 140 140 LEU LEU B . n B 1 141 SER 141 141 141 SER SER B . n B 1 142 ALA 142 142 142 ALA ALA B . n B 1 143 ILE 143 143 143 ILE ILE B . n B 1 144 LYS 144 144 144 LYS LYS B . n B 1 145 GLU 145 145 145 GLU GLU B . n B 1 146 GLY 146 146 146 GLY GLY B . n B 1 147 ARG 147 147 147 ARG ARG B . n B 1 148 VAL 148 148 148 VAL VAL B . n B 1 149 LYS 149 149 149 LYS LYS B . n B 1 150 LYS 150 150 150 LYS LYS B . n B 1 151 ASP 151 151 151 ASP ASP B . n B 1 152 TYR 152 152 152 TYR TYR B . n B 1 153 LYS 153 153 153 LYS LYS B . n B 1 154 THR 154 154 154 THR THR B . n B 1 155 ILE 155 155 155 ILE ILE B . n B 1 156 LEU 156 156 156 LEU LEU B . n B 1 157 GLN 157 157 157 GLN GLN B . n B 1 158 GLU 158 158 158 GLU GLU B . n B 1 159 ILE 159 159 159 ILE ILE B . n B 1 160 THR 160 160 160 THR THR B . n B 1 161 GLN 161 161 161 GLN GLN B . n B 1 162 LYS 162 162 162 LYS LYS B . n B 1 163 ARG 163 163 163 ARG ARG B . n B 1 164 TRP 164 164 164 TRP TRP B . n B 1 165 LYS 165 165 165 LYS LYS B . n B 1 166 GLU 166 166 166 GLU GLU B . n B 1 167 ARG 167 167 167 ARG ARG B . n B 1 168 PRO 168 168 168 PRO PRO B . n B 1 169 GLU 169 169 169 GLU GLU B . n B 1 170 TYR 170 170 170 TYR TYR B . n B 1 171 ARG 171 171 171 ARG ARG B . n B 1 172 LEU 172 172 172 LEU LEU B . n B 1 173 ILE 173 173 173 ILE ILE B . n B 1 174 SER 174 174 174 SER SER B . n B 1 175 VAL 175 175 175 VAL VAL B . n B 1 176 GLU 176 176 176 GLU GLU B . n B 1 177 GLY 177 177 177 GLY GLY B . n B 1 178 PRO 178 178 178 PRO PRO B . n B 1 179 HIS 179 179 179 HIS HIS B . n B 1 180 HIS 180 180 180 HIS HIS B . n B 1 181 LYS 181 181 181 LYS LYS B . n B 1 182 LYS 182 182 182 LYS LYS B . n B 1 183 LYS 183 183 183 LYS LYS B . n B 1 184 PHE 184 184 184 PHE PHE B . n B 1 185 ILE 185 185 185 ILE ILE B . n B 1 186 VAL 186 186 186 VAL VAL B . n B 1 187 GLU 187 187 187 GLU GLU B . n B 1 188 ALA 188 188 188 ALA ALA B . n B 1 189 LYS 189 189 189 LYS LYS B . n B 1 190 ILE 190 190 190 ILE ILE B . n B 1 191 LYS 191 191 191 LYS LYS B . n B 1 192 GLU 192 192 192 GLU GLU B . n B 1 193 TYR 193 193 193 TYR TYR B . n B 1 194 ARG 194 194 194 ARG ARG B . n B 1 195 THR 195 195 195 THR THR B . n B 1 196 LEU 196 196 196 LEU LEU B . n B 1 197 GLY 197 197 197 GLY GLY B . n B 1 198 GLU 198 198 198 GLU GLU B . n B 1 199 GLY 199 199 199 GLY GLY B . n B 1 200 LYS 200 200 200 LYS LYS B . n B 1 201 SER 201 201 201 SER SER B . n B 1 202 LYS 202 202 202 LYS LYS B . n B 1 203 LYS 203 203 203 LYS LYS B . n B 1 204 GLU 204 204 204 GLU GLU B . n B 1 205 ALA 205 205 205 ALA ALA B . n B 1 206 GLU 206 206 206 GLU GLU B . n B 1 207 GLN 207 207 207 GLN GLN B . n B 1 208 ARG 208 208 208 ARG ARG B . n B 1 209 ALA 209 209 209 ALA ALA B . n B 1 210 ALA 210 210 210 ALA ALA B . n B 1 211 GLU 211 211 211 GLU GLU B . n B 1 212 GLU 212 212 212 GLU GLU B . n B 1 213 LEU 213 213 213 LEU LEU B . n B 1 214 ILE 214 214 214 ILE ILE B . n B 1 215 LYS 215 215 215 LYS LYS B . n B 1 216 LEU 216 216 216 LEU LEU B . n B 1 217 LEU 217 217 217 LEU LEU B . n B 1 218 GLU 218 218 218 GLU GLU B . n B 1 219 GLU 219 219 219 GLU GLU B . n B 1 220 SER 220 220 220 SER SER B . n B 1 221 GLU 221 221 ? ? ? B . n C 2 1 A 1 2 2 A A C . n C 2 2 A 2 3 3 A A C . n C 2 3 G 3 4 4 G G C . n C 2 4 G 4 5 5 G G C . n C 2 5 U 5 6 6 U U C . n C 2 6 C 6 7 7 C C C . n C 2 7 A 7 8 8 A A C . n C 2 8 U 8 9 9 U U C . n C 2 9 U 9 10 10 U U C . n C 2 10 C 10 11 11 C C C . n C 2 11 G 11 12 12 G G C . n C 2 12 C 12 13 13 C C C . n C 2 13 A 13 14 14 A A C . n C 2 14 A 14 15 15 A A C . n C 2 15 G 15 16 16 G G C . n C 2 16 A 16 17 17 A A C . n C 2 17 G 17 18 18 G G C . n C 2 18 U 18 19 19 U U C . n C 2 19 G 19 20 20 G G C . n C 2 20 G 20 21 21 G G C . n C 2 21 C 21 22 22 C C C . n C 2 22 C 22 23 23 C C C . n C 2 23 U 23 24 24 U U C . n C 2 24 U 24 25 25 U U C . n C 2 25 G 25 26 26 G G C . n C 2 26 C 26 27 27 C C C . n C 2 27 G 27 28 28 G G C . n D 2 1 A 1 2 2 A A D . n D 2 2 A 2 3 3 A A D . n D 2 3 G 3 4 4 G G D . n D 2 4 G 4 5 5 G G D . n D 2 5 U 5 6 6 U U D . n D 2 6 C 6 7 7 C C D . n D 2 7 A 7 8 8 A A D . n D 2 8 U 8 9 9 U U D . n D 2 9 U 9 10 10 U U D . n D 2 10 C 10 11 11 C C D . n D 2 11 G 11 12 12 G G D . n D 2 12 C 12 13 13 C C D . n D 2 13 A 13 14 14 A A D . n D 2 14 A 14 15 15 A A D . n D 2 15 G 15 16 16 G G D . n D 2 16 A 16 17 17 A A D . n D 2 17 G 17 18 18 G G D . n D 2 18 U 18 19 19 U U D . n D 2 19 G 19 20 20 G G D . n D 2 20 G 20 21 21 G G D . n D 2 21 C 21 22 22 C C D . n D 2 22 C 22 23 23 C C D . n D 2 23 U 23 24 24 U U D . n D 2 24 U 24 25 25 U U D . n D 2 25 G 25 26 26 G G D . n D 2 26 C 26 27 27 C C D . n D 2 27 G 27 28 28 G G D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 MG 1 501 501 MG MG A . F 3 MG 1 301 504 MG MG B . G 3 MG 1 101 502 MG MG C . H 3 MG 1 102 503 MG MG C . I 4 C 1 103 507 C C C . J 3 MG 1 101 505 MG MG D . K 3 MG 1 102 506 MG MG D . L 4 C 1 103 508 C C D . M 5 HOH 1 601 1 HOH HOH A . M 5 HOH 2 602 2 HOH HOH A . M 5 HOH 3 603 3 HOH HOH A . M 5 HOH 4 604 4 HOH HOH A . M 5 HOH 5 605 5 HOH HOH A . M 5 HOH 6 606 22 HOH HOH A . N 5 HOH 1 401 6 HOH HOH B . N 5 HOH 2 402 16 HOH HOH B . N 5 HOH 3 403 21 HOH HOH B . O 5 HOH 1 201 10 HOH HOH C . O 5 HOH 2 202 12 HOH HOH C . O 5 HOH 3 203 13 HOH HOH C . O 5 HOH 4 204 18 HOH HOH C . O 5 HOH 5 205 19 HOH HOH C . P 5 HOH 1 201 7 HOH HOH D . P 5 HOH 2 202 8 HOH HOH D . P 5 HOH 3 203 9 HOH HOH D . P 5 HOH 4 204 11 HOH HOH D . P 5 HOH 5 205 15 HOH HOH D . P 5 HOH 6 206 17 HOH HOH D . P 5 HOH 7 207 20 HOH HOH D . P 5 HOH 8 208 23 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10270 ? 1 MORE -127 ? 1 'SSA (A^2)' 27020 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 101.3 ? 2 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 121.3 ? 3 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 47.6 ? 4 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? M HOH . ? A HOH 601 ? 1_555 71.6 ? 5 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? M HOH . ? A HOH 601 ? 1_555 92.7 ? 6 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? M HOH . ? A HOH 601 ? 1_555 138.4 ? 7 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OP1 ? I C . ? C C 103 ? 1_555 84.0 ? 8 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OP1 ? I C . ? C C 103 ? 1_555 120.0 ? 9 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OP1 ? I C . ? C C 103 ? 1_555 78.4 ? 10 O ? M HOH . ? A HOH 601 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 OP1 ? I C . ? C C 103 ? 1_555 142.7 ? 11 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 "O3'" ? D G 27 ? D G 28 ? 1_555 74.8 ? 12 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 "O3'" ? D G 27 ? D G 28 ? 1_555 173.1 ? 13 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 "O3'" ? D G 27 ? D G 28 ? 1_555 139.2 ? 14 O ? M HOH . ? A HOH 601 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 "O3'" ? D G 27 ? D G 28 ? 1_555 80.7 ? 15 OP1 ? I C . ? C C 103 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 "O3'" ? D G 27 ? D G 28 ? 1_555 65.7 ? 16 OD2 ? A ASP 44 ? A ASP 44 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 136.9 ? 17 OE1 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 100.6 ? 18 OE2 ? A GLU 110 ? A GLU 110 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 100.8 ? 19 O ? M HOH . ? A HOH 601 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 70.7 ? 20 OP1 ? I C . ? C C 103 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 115.4 ? 21 "O3'" ? D G 27 ? D G 28 ? 1_555 MG ? E MG . ? A MG 501 ? 1_555 O ? P HOH . ? D HOH 205 ? 1_555 79.3 ? 22 O ? M HOH . ? A HOH 606 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 OP1 ? C A 1 ? C A 2 ? 1_555 118.7 ? 23 O ? M HOH . ? A HOH 606 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 O ? O HOH . ? C HOH 204 ? 1_555 67.5 ? 24 OP1 ? C A 1 ? C A 2 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 O ? O HOH . ? C HOH 204 ? 1_555 65.3 ? 25 O ? M HOH . ? A HOH 606 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 O ? O HOH . ? C HOH 205 ? 1_555 110.3 ? 26 OP1 ? C A 1 ? C A 2 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 O ? O HOH . ? C HOH 205 ? 1_555 109.4 ? 27 O ? O HOH . ? C HOH 204 ? 1_555 MG ? G MG . ? C MG 101 ? 1_555 O ? O HOH . ? C HOH 205 ? 1_555 169.9 ? 28 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 54.4 ? 29 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 110.9 ? 30 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 73.3 ? 31 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? N HOH . ? B HOH 402 ? 1_555 110.3 ? 32 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? N HOH . ? B HOH 402 ? 1_555 59.7 ? 33 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? N HOH . ? B HOH 402 ? 1_555 66.3 ? 34 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 "O3'" ? C G 27 ? C G 28 ? 1_555 94.9 ? 35 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 "O3'" ? C G 27 ? C G 28 ? 1_555 111.1 ? 36 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 "O3'" ? C G 27 ? C G 28 ? 1_555 148.6 ? 37 O ? N HOH . ? B HOH 402 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 "O3'" ? C G 27 ? C G 28 ? 1_555 88.6 ? 38 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OP1 ? L C . ? D C 103 ? 1_555 104.6 ? 39 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OP1 ? L C . ? D C 103 ? 1_555 158.8 ? 40 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OP1 ? L C . ? D C 103 ? 1_555 117.8 ? 41 O ? N HOH . ? B HOH 402 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OP1 ? L C . ? D C 103 ? 1_555 140.2 ? 42 "O3'" ? C G 27 ? C G 28 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 OP1 ? L C . ? D C 103 ? 1_555 69.7 ? 43 OD2 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 167.2 ? 44 OD1 ? B ASP 44 ? B ASP 44 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 128.2 ? 45 OE2 ? B GLU 110 ? B GLU 110 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 80.8 ? 46 O ? N HOH . ? B HOH 402 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 68.9 ? 47 "O3'" ? C G 27 ? C G 28 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 72.4 ? 48 OP1 ? L C . ? D C 103 ? 1_555 MG ? F MG . ? B MG 301 ? 1_555 O ? P HOH . ? D HOH 206 ? 1_555 72.8 ? 49 O ? N HOH . ? B HOH 403 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 OP1 ? D A 1 ? D A 2 ? 1_555 149.4 ? 50 O ? N HOH . ? B HOH 403 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 O ? P HOH . ? D HOH 207 ? 1_555 119.9 ? 51 OP1 ? D A 1 ? D A 2 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 O ? P HOH . ? D HOH 207 ? 1_555 74.7 ? 52 O ? N HOH . ? B HOH 403 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 94.6 ? 53 OP1 ? D A 1 ? D A 2 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 92.0 ? 54 O ? P HOH . ? D HOH 207 ? 1_555 MG ? J MG . ? D MG 101 ? 1_555 O ? P HOH . ? D HOH 208 ? 1_555 132.7 ? 55 OP2 ? C A 1 ? C A 2 ? 1_555 MG ? H MG . ? C MG 102 ? 1_555 OP2 ? C A 2 ? C A 3 ? 1_555 87.7 ? 56 OP2 ? D A 1 ? D A 2 ? 1_555 MG ? K MG . ? D MG 102 ? 1_555 OP2 ? D A 2 ? D A 3 ? 1_555 100.6 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-11 2 'Structure model' 1 1 2023-08-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' audit_author 2 2 'Structure model' chem_comp_atom 3 2 'Structure model' chem_comp_bond 4 2 'Structure model' citation_author 5 2 'Structure model' database_2 6 2 'Structure model' pdbx_struct_conn_angle 7 2 'Structure model' struct_conn 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_audit_author.identifier_ORCID' 2 2 'Structure model' '_citation_author.identifier_ORCID' 3 2 'Structure model' '_database_2.pdbx_DOI' 4 2 'Structure model' '_database_2.pdbx_database_accession' 5 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 6 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 7 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 8 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 9 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 10 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 11 2 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 12 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id' 13 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_seq_id' 14 2 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 15 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 16 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 17 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 18 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 19 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 20 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 21 2 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 22 2 'Structure model' '_pdbx_struct_conn_angle.value' 23 2 'Structure model' '_struct_conn.pdbx_dist_value' 24 2 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 25 2 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 26 2 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 27 2 'Structure model' '_struct_conn.ptnr1_label_asym_id' 28 2 'Structure model' '_struct_conn.ptnr1_label_atom_id' 29 2 'Structure model' '_struct_conn.ptnr1_label_comp_id' 30 2 'Structure model' '_struct_conn.ptnr1_label_seq_id' 31 2 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 32 2 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 33 2 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 34 2 'Structure model' '_struct_conn.ptnr2_label_asym_id' 35 2 'Structure model' '_struct_conn.ptnr2_label_atom_id' 36 2 'Structure model' '_struct_conn.ptnr2_label_comp_id' 37 2 'Structure model' '_struct_conn.ptnr2_label_seq_id' 38 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 39 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 40 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALEPACK . ? program 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 2 PHENIX 1.7.3_928 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 SERGUI . ? ? ? ? 'data collection' ? ? ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 CNS . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C A 2 ? ? OP3 C A 2 ? ? 1.480 1.607 -0.127 0.012 N 2 1 P D A 2 ? ? OP3 D A 2 ? ? 1.481 1.607 -0.126 0.012 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 33 ? ? -101.54 -65.04 2 1 ARG A 163 ? ? -94.03 -66.03 3 1 LYS A 191 ? ? 52.57 -135.23 4 1 GLU A 219 ? ? -58.64 -73.37 5 1 SER A 220 ? ? -62.87 -70.71 6 1 TYR B 30 ? ? -93.24 -64.92 7 1 LYS B 96 ? ? -116.90 -78.52 8 1 ARG B 163 ? ? -91.79 -71.25 9 1 HIS B 179 ? ? -143.37 -68.74 10 1 LYS B 191 ? ? 52.49 -130.21 11 1 GLU B 218 ? ? -138.65 -64.29 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 B MET 1 ? B MET 1 3 1 Y 1 B LYS 2 ? B LYS 2 4 1 Y 1 B GLU 221 ? B GLU 221 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal A OP3 O N N 1 A P P N N 2 A OP1 O N N 3 A OP2 O N N 4 A "O5'" O N N 5 A "C5'" C N N 6 A "C4'" C N R 7 A "O4'" O N N 8 A "C3'" C N S 9 A "O3'" O N N 10 A "C2'" C N R 11 A "O2'" O N N 12 A "C1'" C N R 13 A N9 N Y N 14 A C8 C Y N 15 A N7 N Y N 16 A C5 C Y N 17 A C6 C Y N 18 A N6 N N N 19 A N1 N Y N 20 A C2 C Y N 21 A N3 N Y N 22 A C4 C Y N 23 A HOP3 H N N 24 A HOP2 H N N 25 A "H5'" H N N 26 A "H5''" H N N 27 A "H4'" H N N 28 A "H3'" H N N 29 A "HO3'" H N N 30 A "H2'" H N N 31 A "HO2'" H N N 32 A "H1'" H N N 33 A H8 H N N 34 A H61 H N N 35 A H62 H N N 36 A H2 H N N 37 ALA N N N N 38 ALA CA C N S 39 ALA C C N N 40 ALA O O N N 41 ALA CB C N N 42 ALA OXT O N N 43 ALA H H N N 44 ALA H2 H N N 45 ALA HA H N N 46 ALA HB1 H N N 47 ALA HB2 H N N 48 ALA HB3 H N N 49 ALA HXT H N N 50 ARG N N N N 51 ARG CA C N S 52 ARG C C N N 53 ARG O O N N 54 ARG CB C N N 55 ARG CG C N N 56 ARG CD C N N 57 ARG NE N N N 58 ARG CZ C N N 59 ARG NH1 N N N 60 ARG NH2 N N N 61 ARG OXT O N N 62 ARG H H N N 63 ARG H2 H N N 64 ARG HA H N N 65 ARG HB2 H N N 66 ARG HB3 H N N 67 ARG HG2 H N N 68 ARG HG3 H N N 69 ARG HD2 H N N 70 ARG HD3 H N N 71 ARG HE H N N 72 ARG HH11 H N N 73 ARG HH12 H N N 74 ARG HH21 H N N 75 ARG HH22 H N N 76 ARG HXT H N N 77 ASN N N N N 78 ASN CA C N S 79 ASN C C N N 80 ASN O O N N 81 ASN CB C N N 82 ASN CG C N N 83 ASN OD1 O N N 84 ASN ND2 N N N 85 ASN OXT O N N 86 ASN H H N N 87 ASN H2 H N N 88 ASN HA H N N 89 ASN HB2 H N N 90 ASN HB3 H N N 91 ASN HD21 H N N 92 ASN HD22 H N N 93 ASN HXT H N N 94 ASP N N N N 95 ASP CA C N S 96 ASP C C N N 97 ASP O O N N 98 ASP CB C N N 99 ASP CG C N N 100 ASP OD1 O N N 101 ASP OD2 O N N 102 ASP OXT O N N 103 ASP H H N N 104 ASP H2 H N N 105 ASP HA H N N 106 ASP HB2 H N N 107 ASP HB3 H N N 108 ASP HD2 H N N 109 ASP HXT H N N 110 C OP3 O N N 111 C P P N N 112 C OP1 O N N 113 C OP2 O N N 114 C "O5'" O N N 115 C "C5'" C N N 116 C "C4'" C N R 117 C "O4'" O N N 118 C "C3'" C N S 119 C "O3'" O N N 120 C "C2'" C N R 121 C "O2'" O N N 122 C "C1'" C N R 123 C N1 N N N 124 C C2 C N N 125 C O2 O N N 126 C N3 N N N 127 C C4 C N N 128 C N4 N N N 129 C C5 C N N 130 C C6 C N N 131 C HOP3 H N N 132 C HOP2 H N N 133 C "H5'" H N N 134 C "H5''" H N N 135 C "H4'" H N N 136 C "H3'" H N N 137 C "HO3'" H N N 138 C "H2'" H N N 139 C "HO2'" H N N 140 C "H1'" H N N 141 C H41 H N N 142 C H42 H N N 143 C H5 H N N 144 C H6 H N N 145 G OP3 O N N 146 G P P N N 147 G OP1 O N N 148 G OP2 O N N 149 G "O5'" O N N 150 G "C5'" C N N 151 G "C4'" C N R 152 G "O4'" O N N 153 G "C3'" C N S 154 G "O3'" O N N 155 G "C2'" C N R 156 G "O2'" O N N 157 G "C1'" C N R 158 G N9 N Y N 159 G C8 C Y N 160 G N7 N Y N 161 G C5 C Y N 162 G C6 C N N 163 G O6 O N N 164 G N1 N N N 165 G C2 C N N 166 G N2 N N N 167 G N3 N N N 168 G C4 C Y N 169 G HOP3 H N N 170 G HOP2 H N N 171 G "H5'" H N N 172 G "H5''" H N N 173 G "H4'" H N N 174 G "H3'" H N N 175 G "HO3'" H N N 176 G "H2'" H N N 177 G "HO2'" H N N 178 G "H1'" H N N 179 G H8 H N N 180 G H1 H N N 181 G H21 H N N 182 G H22 H N N 183 GLN N N N N 184 GLN CA C N S 185 GLN C C N N 186 GLN O O N N 187 GLN CB C N N 188 GLN CG C N N 189 GLN CD C N N 190 GLN OE1 O N N 191 GLN NE2 N N N 192 GLN OXT O N N 193 GLN H H N N 194 GLN H2 H N N 195 GLN HA H N N 196 GLN HB2 H N N 197 GLN HB3 H N N 198 GLN HG2 H N N 199 GLN HG3 H N N 200 GLN HE21 H N N 201 GLN HE22 H N N 202 GLN HXT H N N 203 GLU N N N N 204 GLU CA C N S 205 GLU C C N N 206 GLU O O N N 207 GLU CB C N N 208 GLU CG C N N 209 GLU CD C N N 210 GLU OE1 O N N 211 GLU OE2 O N N 212 GLU OXT O N N 213 GLU H H N N 214 GLU H2 H N N 215 GLU HA H N N 216 GLU HB2 H N N 217 GLU HB3 H N N 218 GLU HG2 H N N 219 GLU HG3 H N N 220 GLU HE2 H N N 221 GLU HXT H N N 222 GLY N N N N 223 GLY CA C N N 224 GLY C C N N 225 GLY O O N N 226 GLY OXT O N N 227 GLY H H N N 228 GLY H2 H N N 229 GLY HA2 H N N 230 GLY HA3 H N N 231 GLY HXT H N N 232 HIS N N N N 233 HIS CA C N S 234 HIS C C N N 235 HIS O O N N 236 HIS CB C N N 237 HIS CG C Y N 238 HIS ND1 N Y N 239 HIS CD2 C Y N 240 HIS CE1 C Y N 241 HIS NE2 N Y N 242 HIS OXT O N N 243 HIS H H N N 244 HIS H2 H N N 245 HIS HA H N N 246 HIS HB2 H N N 247 HIS HB3 H N N 248 HIS HD1 H N N 249 HIS HD2 H N N 250 HIS HE1 H N N 251 HIS HE2 H N N 252 HIS HXT H N N 253 HOH O O N N 254 HOH H1 H N N 255 HOH H2 H N N 256 ILE N N N N 257 ILE CA C N S 258 ILE C C N N 259 ILE O O N N 260 ILE CB C N S 261 ILE CG1 C N N 262 ILE CG2 C N N 263 ILE CD1 C N N 264 ILE OXT O N N 265 ILE H H N N 266 ILE H2 H N N 267 ILE HA H N N 268 ILE HB H N N 269 ILE HG12 H N N 270 ILE HG13 H N N 271 ILE HG21 H N N 272 ILE HG22 H N N 273 ILE HG23 H N N 274 ILE HD11 H N N 275 ILE HD12 H N N 276 ILE HD13 H N N 277 ILE HXT H N N 278 LEU N N N N 279 LEU CA C N S 280 LEU C C N N 281 LEU O O N N 282 LEU CB C N N 283 LEU CG C N N 284 LEU CD1 C N N 285 LEU CD2 C N N 286 LEU OXT O N N 287 LEU H H N N 288 LEU H2 H N N 289 LEU HA H N N 290 LEU HB2 H N N 291 LEU HB3 H N N 292 LEU HG H N N 293 LEU HD11 H N N 294 LEU HD12 H N N 295 LEU HD13 H N N 296 LEU HD21 H N N 297 LEU HD22 H N N 298 LEU HD23 H N N 299 LEU HXT H N N 300 LYS N N N N 301 LYS CA C N S 302 LYS C C N N 303 LYS O O N N 304 LYS CB C N N 305 LYS CG C N N 306 LYS CD C N N 307 LYS CE C N N 308 LYS NZ N N N 309 LYS OXT O N N 310 LYS H H N N 311 LYS H2 H N N 312 LYS HA H N N 313 LYS HB2 H N N 314 LYS HB3 H N N 315 LYS HG2 H N N 316 LYS HG3 H N N 317 LYS HD2 H N N 318 LYS HD3 H N N 319 LYS HE2 H N N 320 LYS HE3 H N N 321 LYS HZ1 H N N 322 LYS HZ2 H N N 323 LYS HZ3 H N N 324 LYS HXT H N N 325 MET N N N N 326 MET CA C N S 327 MET C C N N 328 MET O O N N 329 MET CB C N N 330 MET CG C N N 331 MET SD S N N 332 MET CE C N N 333 MET OXT O N N 334 MET H H N N 335 MET H2 H N N 336 MET HA H N N 337 MET HB2 H N N 338 MET HB3 H N N 339 MET HG2 H N N 340 MET HG3 H N N 341 MET HE1 H N N 342 MET HE2 H N N 343 MET HE3 H N N 344 MET HXT H N N 345 MG MG MG N N 346 PHE N N N N 347 PHE CA C N S 348 PHE C C N N 349 PHE O O N N 350 PHE CB C N N 351 PHE CG C Y N 352 PHE CD1 C Y N 353 PHE CD2 C Y N 354 PHE CE1 C Y N 355 PHE CE2 C Y N 356 PHE CZ C Y N 357 PHE OXT O N N 358 PHE H H N N 359 PHE H2 H N N 360 PHE HA H N N 361 PHE HB2 H N N 362 PHE HB3 H N N 363 PHE HD1 H N N 364 PHE HD2 H N N 365 PHE HE1 H N N 366 PHE HE2 H N N 367 PHE HZ H N N 368 PHE HXT H N N 369 PRO N N N N 370 PRO CA C N S 371 PRO C C N N 372 PRO O O N N 373 PRO CB C N N 374 PRO CG C N N 375 PRO CD C N N 376 PRO OXT O N N 377 PRO H H N N 378 PRO HA H N N 379 PRO HB2 H N N 380 PRO HB3 H N N 381 PRO HG2 H N N 382 PRO HG3 H N N 383 PRO HD2 H N N 384 PRO HD3 H N N 385 PRO HXT H N N 386 SER N N N N 387 SER CA C N S 388 SER C C N N 389 SER O O N N 390 SER CB C N N 391 SER OG O N N 392 SER OXT O N N 393 SER H H N N 394 SER H2 H N N 395 SER HA H N N 396 SER HB2 H N N 397 SER HB3 H N N 398 SER HG H N N 399 SER HXT H N N 400 THR N N N N 401 THR CA C N S 402 THR C C N N 403 THR O O N N 404 THR CB C N R 405 THR OG1 O N N 406 THR CG2 C N N 407 THR OXT O N N 408 THR H H N N 409 THR H2 H N N 410 THR HA H N N 411 THR HB H N N 412 THR HG1 H N N 413 THR HG21 H N N 414 THR HG22 H N N 415 THR HG23 H N N 416 THR HXT H N N 417 TRP N N N N 418 TRP CA C N S 419 TRP C C N N 420 TRP O O N N 421 TRP CB C N N 422 TRP CG C Y N 423 TRP CD1 C Y N 424 TRP CD2 C Y N 425 TRP NE1 N Y N 426 TRP CE2 C Y N 427 TRP CE3 C Y N 428 TRP CZ2 C Y N 429 TRP CZ3 C Y N 430 TRP CH2 C Y N 431 TRP OXT O N N 432 TRP H H N N 433 TRP H2 H N N 434 TRP HA H N N 435 TRP HB2 H N N 436 TRP HB3 H N N 437 TRP HD1 H N N 438 TRP HE1 H N N 439 TRP HE3 H N N 440 TRP HZ2 H N N 441 TRP HZ3 H N N 442 TRP HH2 H N N 443 TRP HXT H N N 444 TYR N N N N 445 TYR CA C N S 446 TYR C C N N 447 TYR O O N N 448 TYR CB C N N 449 TYR CG C Y N 450 TYR CD1 C Y N 451 TYR CD2 C Y N 452 TYR CE1 C Y N 453 TYR CE2 C Y N 454 TYR CZ C Y N 455 TYR OH O N N 456 TYR OXT O N N 457 TYR H H N N 458 TYR H2 H N N 459 TYR HA H N N 460 TYR HB2 H N N 461 TYR HB3 H N N 462 TYR HD1 H N N 463 TYR HD2 H N N 464 TYR HE1 H N N 465 TYR HE2 H N N 466 TYR HH H N N 467 TYR HXT H N N 468 U OP3 O N N 469 U P P N N 470 U OP1 O N N 471 U OP2 O N N 472 U "O5'" O N N 473 U "C5'" C N N 474 U "C4'" C N R 475 U "O4'" O N N 476 U "C3'" C N S 477 U "O3'" O N N 478 U "C2'" C N R 479 U "O2'" O N N 480 U "C1'" C N R 481 U N1 N N N 482 U C2 C N N 483 U O2 O N N 484 U N3 N N N 485 U C4 C N N 486 U O4 O N N 487 U C5 C N N 488 U C6 C N N 489 U HOP3 H N N 490 U HOP2 H N N 491 U "H5'" H N N 492 U "H5''" H N N 493 U "H4'" H N N 494 U "H3'" H N N 495 U "HO3'" H N N 496 U "H2'" H N N 497 U "HO2'" H N N 498 U "H1'" H N N 499 U H3 H N N 500 U H5 H N N 501 U H6 H N N 502 VAL N N N N 503 VAL CA C N S 504 VAL C C N N 505 VAL O O N N 506 VAL CB C N N 507 VAL CG1 C N N 508 VAL CG2 C N N 509 VAL OXT O N N 510 VAL H H N N 511 VAL H2 H N N 512 VAL HA H N N 513 VAL HB H N N 514 VAL HG11 H N N 515 VAL HG12 H N N 516 VAL HG13 H N N 517 VAL HG21 H N N 518 VAL HG22 H N N 519 VAL HG23 H N N 520 VAL HXT H N N 521 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal A OP3 P sing N N 1 A OP3 HOP3 sing N N 2 A P OP1 doub N N 3 A P OP2 sing N N 4 A P "O5'" sing N N 5 A OP2 HOP2 sing N N 6 A "O5'" "C5'" sing N N 7 A "C5'" "C4'" sing N N 8 A "C5'" "H5'" sing N N 9 A "C5'" "H5''" sing N N 10 A "C4'" "O4'" sing N N 11 A "C4'" "C3'" sing N N 12 A "C4'" "H4'" sing N N 13 A "O4'" "C1'" sing N N 14 A "C3'" "O3'" sing N N 15 A "C3'" "C2'" sing N N 16 A "C3'" "H3'" sing N N 17 A "O3'" "HO3'" sing N N 18 A "C2'" "O2'" sing N N 19 A "C2'" "C1'" sing N N 20 A "C2'" "H2'" sing N N 21 A "O2'" "HO2'" sing N N 22 A "C1'" N9 sing N N 23 A "C1'" "H1'" sing N N 24 A N9 C8 sing Y N 25 A N9 C4 sing Y N 26 A C8 N7 doub Y N 27 A C8 H8 sing N N 28 A N7 C5 sing Y N 29 A C5 C6 sing Y N 30 A C5 C4 doub Y N 31 A C6 N6 sing N N 32 A C6 N1 doub Y N 33 A N6 H61 sing N N 34 A N6 H62 sing N N 35 A N1 C2 sing Y N 36 A C2 N3 doub Y N 37 A C2 H2 sing N N 38 A N3 C4 sing Y N 39 ALA N CA sing N N 40 ALA N H sing N N 41 ALA N H2 sing N N 42 ALA CA C sing N N 43 ALA CA CB sing N N 44 ALA CA HA sing N N 45 ALA C O doub N N 46 ALA C OXT sing N N 47 ALA CB HB1 sing N N 48 ALA CB HB2 sing N N 49 ALA CB HB3 sing N N 50 ALA OXT HXT sing N N 51 ARG N CA sing N N 52 ARG N H sing N N 53 ARG N H2 sing N N 54 ARG CA C sing N N 55 ARG CA CB sing N N 56 ARG CA HA sing N N 57 ARG C O doub N N 58 ARG C OXT sing N N 59 ARG CB CG sing N N 60 ARG CB HB2 sing N N 61 ARG CB HB3 sing N N 62 ARG CG CD sing N N 63 ARG CG HG2 sing N N 64 ARG CG HG3 sing N N 65 ARG CD NE sing N N 66 ARG CD HD2 sing N N 67 ARG CD HD3 sing N N 68 ARG NE CZ sing N N 69 ARG NE HE sing N N 70 ARG CZ NH1 sing N N 71 ARG CZ NH2 doub N N 72 ARG NH1 HH11 sing N N 73 ARG NH1 HH12 sing N N 74 ARG NH2 HH21 sing N N 75 ARG NH2 HH22 sing N N 76 ARG OXT HXT sing N N 77 ASN N CA sing N N 78 ASN N H sing N N 79 ASN N H2 sing N N 80 ASN CA C sing N N 81 ASN CA CB sing N N 82 ASN CA HA sing N N 83 ASN C O doub N N 84 ASN C OXT sing N N 85 ASN CB CG sing N N 86 ASN CB HB2 sing N N 87 ASN CB HB3 sing N N 88 ASN CG OD1 doub N N 89 ASN CG ND2 sing N N 90 ASN ND2 HD21 sing N N 91 ASN ND2 HD22 sing N N 92 ASN OXT HXT sing N N 93 ASP N CA sing N N 94 ASP N H sing N N 95 ASP N H2 sing N N 96 ASP CA C sing N N 97 ASP CA CB sing N N 98 ASP CA HA sing N N 99 ASP C O doub N N 100 ASP C OXT sing N N 101 ASP CB CG sing N N 102 ASP CB HB2 sing N N 103 ASP CB HB3 sing N N 104 ASP CG OD1 doub N N 105 ASP CG OD2 sing N N 106 ASP OD2 HD2 sing N N 107 ASP OXT HXT sing N N 108 C OP3 P sing N N 109 C OP3 HOP3 sing N N 110 C P OP1 doub N N 111 C P OP2 sing N N 112 C P "O5'" sing N N 113 C OP2 HOP2 sing N N 114 C "O5'" "C5'" sing N N 115 C "C5'" "C4'" sing N N 116 C "C5'" "H5'" sing N N 117 C "C5'" "H5''" sing N N 118 C "C4'" "O4'" sing N N 119 C "C4'" "C3'" sing N N 120 C "C4'" "H4'" sing N N 121 C "O4'" "C1'" sing N N 122 C "C3'" "O3'" sing N N 123 C "C3'" "C2'" sing N N 124 C "C3'" "H3'" sing N N 125 C "O3'" "HO3'" sing N N 126 C "C2'" "O2'" sing N N 127 C "C2'" "C1'" sing N N 128 C "C2'" "H2'" sing N N 129 C "O2'" "HO2'" sing N N 130 C "C1'" N1 sing N N 131 C "C1'" "H1'" sing N N 132 C N1 C2 sing N N 133 C N1 C6 sing N N 134 C C2 O2 doub N N 135 C C2 N3 sing N N 136 C N3 C4 doub N N 137 C C4 N4 sing N N 138 C C4 C5 sing N N 139 C N4 H41 sing N N 140 C N4 H42 sing N N 141 C C5 C6 doub N N 142 C C5 H5 sing N N 143 C C6 H6 sing N N 144 G OP3 P sing N N 145 G OP3 HOP3 sing N N 146 G P OP1 doub N N 147 G P OP2 sing N N 148 G P "O5'" sing N N 149 G OP2 HOP2 sing N N 150 G "O5'" "C5'" sing N N 151 G "C5'" "C4'" sing N N 152 G "C5'" "H5'" sing N N 153 G "C5'" "H5''" sing N N 154 G "C4'" "O4'" sing N N 155 G "C4'" "C3'" sing N N 156 G "C4'" "H4'" sing N N 157 G "O4'" "C1'" sing N N 158 G "C3'" "O3'" sing N N 159 G "C3'" "C2'" sing N N 160 G "C3'" "H3'" sing N N 161 G "O3'" "HO3'" sing N N 162 G "C2'" "O2'" sing N N 163 G "C2'" "C1'" sing N N 164 G "C2'" "H2'" sing N N 165 G "O2'" "HO2'" sing N N 166 G "C1'" N9 sing N N 167 G "C1'" "H1'" sing N N 168 G N9 C8 sing Y N 169 G N9 C4 sing Y N 170 G C8 N7 doub Y N 171 G C8 H8 sing N N 172 G N7 C5 sing Y N 173 G C5 C6 sing N N 174 G C5 C4 doub Y N 175 G C6 O6 doub N N 176 G C6 N1 sing N N 177 G N1 C2 sing N N 178 G N1 H1 sing N N 179 G C2 N2 sing N N 180 G C2 N3 doub N N 181 G N2 H21 sing N N 182 G N2 H22 sing N N 183 G N3 C4 sing N N 184 GLN N CA sing N N 185 GLN N H sing N N 186 GLN N H2 sing N N 187 GLN CA C sing N N 188 GLN CA CB sing N N 189 GLN CA HA sing N N 190 GLN C O doub N N 191 GLN C OXT sing N N 192 GLN CB CG sing N N 193 GLN CB HB2 sing N N 194 GLN CB HB3 sing N N 195 GLN CG CD sing N N 196 GLN CG HG2 sing N N 197 GLN CG HG3 sing N N 198 GLN CD OE1 doub N N 199 GLN CD NE2 sing N N 200 GLN NE2 HE21 sing N N 201 GLN NE2 HE22 sing N N 202 GLN OXT HXT sing N N 203 GLU N CA sing N N 204 GLU N H sing N N 205 GLU N H2 sing N N 206 GLU CA C sing N N 207 GLU CA CB sing N N 208 GLU CA HA sing N N 209 GLU C O doub N N 210 GLU C OXT sing N N 211 GLU CB CG sing N N 212 GLU CB HB2 sing N N 213 GLU CB HB3 sing N N 214 GLU CG CD sing N N 215 GLU CG HG2 sing N N 216 GLU CG HG3 sing N N 217 GLU CD OE1 doub N N 218 GLU CD OE2 sing N N 219 GLU OE2 HE2 sing N N 220 GLU OXT HXT sing N N 221 GLY N CA sing N N 222 GLY N H sing N N 223 GLY N H2 sing N N 224 GLY CA C sing N N 225 GLY CA HA2 sing N N 226 GLY CA HA3 sing N N 227 GLY C O doub N N 228 GLY C OXT sing N N 229 GLY OXT HXT sing N N 230 HIS N CA sing N N 231 HIS N H sing N N 232 HIS N H2 sing N N 233 HIS CA C sing N N 234 HIS CA CB sing N N 235 HIS CA HA sing N N 236 HIS C O doub N N 237 HIS C OXT sing N N 238 HIS CB CG sing N N 239 HIS CB HB2 sing N N 240 HIS CB HB3 sing N N 241 HIS CG ND1 sing Y N 242 HIS CG CD2 doub Y N 243 HIS ND1 CE1 doub Y N 244 HIS ND1 HD1 sing N N 245 HIS CD2 NE2 sing Y N 246 HIS CD2 HD2 sing N N 247 HIS CE1 NE2 sing Y N 248 HIS CE1 HE1 sing N N 249 HIS NE2 HE2 sing N N 250 HIS OXT HXT sing N N 251 HOH O H1 sing N N 252 HOH O H2 sing N N 253 ILE N CA sing N N 254 ILE N H sing N N 255 ILE N H2 sing N N 256 ILE CA C sing N N 257 ILE CA CB sing N N 258 ILE CA HA sing N N 259 ILE C O doub N N 260 ILE C OXT sing N N 261 ILE CB CG1 sing N N 262 ILE CB CG2 sing N N 263 ILE CB HB sing N N 264 ILE CG1 CD1 sing N N 265 ILE CG1 HG12 sing N N 266 ILE CG1 HG13 sing N N 267 ILE CG2 HG21 sing N N 268 ILE CG2 HG22 sing N N 269 ILE CG2 HG23 sing N N 270 ILE CD1 HD11 sing N N 271 ILE CD1 HD12 sing N N 272 ILE CD1 HD13 sing N N 273 ILE OXT HXT sing N N 274 LEU N CA sing N N 275 LEU N H sing N N 276 LEU N H2 sing N N 277 LEU CA C sing N N 278 LEU CA CB sing N N 279 LEU CA HA sing N N 280 LEU C O doub N N 281 LEU C OXT sing N N 282 LEU CB CG sing N N 283 LEU CB HB2 sing N N 284 LEU CB HB3 sing N N 285 LEU CG CD1 sing N N 286 LEU CG CD2 sing N N 287 LEU CG HG sing N N 288 LEU CD1 HD11 sing N N 289 LEU CD1 HD12 sing N N 290 LEU CD1 HD13 sing N N 291 LEU CD2 HD21 sing N N 292 LEU CD2 HD22 sing N N 293 LEU CD2 HD23 sing N N 294 LEU OXT HXT sing N N 295 LYS N CA sing N N 296 LYS N H sing N N 297 LYS N H2 sing N N 298 LYS CA C sing N N 299 LYS CA CB sing N N 300 LYS CA HA sing N N 301 LYS C O doub N N 302 LYS C OXT sing N N 303 LYS CB CG sing N N 304 LYS CB HB2 sing N N 305 LYS CB HB3 sing N N 306 LYS CG CD sing N N 307 LYS CG HG2 sing N N 308 LYS CG HG3 sing N N 309 LYS CD CE sing N N 310 LYS CD HD2 sing N N 311 LYS CD HD3 sing N N 312 LYS CE NZ sing N N 313 LYS CE HE2 sing N N 314 LYS CE HE3 sing N N 315 LYS NZ HZ1 sing N N 316 LYS NZ HZ2 sing N N 317 LYS NZ HZ3 sing N N 318 LYS OXT HXT sing N N 319 MET N CA sing N N 320 MET N H sing N N 321 MET N H2 sing N N 322 MET CA C sing N N 323 MET CA CB sing N N 324 MET CA HA sing N N 325 MET C O doub N N 326 MET C OXT sing N N 327 MET CB CG sing N N 328 MET CB HB2 sing N N 329 MET CB HB3 sing N N 330 MET CG SD sing N N 331 MET CG HG2 sing N N 332 MET CG HG3 sing N N 333 MET SD CE sing N N 334 MET CE HE1 sing N N 335 MET CE HE2 sing N N 336 MET CE HE3 sing N N 337 MET OXT HXT sing N N 338 PHE N CA sing N N 339 PHE N H sing N N 340 PHE N H2 sing N N 341 PHE CA C sing N N 342 PHE CA CB sing N N 343 PHE CA HA sing N N 344 PHE C O doub N N 345 PHE C OXT sing N N 346 PHE CB CG sing N N 347 PHE CB HB2 sing N N 348 PHE CB HB3 sing N N 349 PHE CG CD1 doub Y N 350 PHE CG CD2 sing Y N 351 PHE CD1 CE1 sing Y N 352 PHE CD1 HD1 sing N N 353 PHE CD2 CE2 doub Y N 354 PHE CD2 HD2 sing N N 355 PHE CE1 CZ doub Y N 356 PHE CE1 HE1 sing N N 357 PHE CE2 CZ sing Y N 358 PHE CE2 HE2 sing N N 359 PHE CZ HZ sing N N 360 PHE OXT HXT sing N N 361 PRO N CA sing N N 362 PRO N CD sing N N 363 PRO N H sing N N 364 PRO CA C sing N N 365 PRO CA CB sing N N 366 PRO CA HA sing N N 367 PRO C O doub N N 368 PRO C OXT sing N N 369 PRO CB CG sing N N 370 PRO CB HB2 sing N N 371 PRO CB HB3 sing N N 372 PRO CG CD sing N N 373 PRO CG HG2 sing N N 374 PRO CG HG3 sing N N 375 PRO CD HD2 sing N N 376 PRO CD HD3 sing N N 377 PRO OXT HXT sing N N 378 SER N CA sing N N 379 SER N H sing N N 380 SER N H2 sing N N 381 SER CA C sing N N 382 SER CA CB sing N N 383 SER CA HA sing N N 384 SER C O doub N N 385 SER C OXT sing N N 386 SER CB OG sing N N 387 SER CB HB2 sing N N 388 SER CB HB3 sing N N 389 SER OG HG sing N N 390 SER OXT HXT sing N N 391 THR N CA sing N N 392 THR N H sing N N 393 THR N H2 sing N N 394 THR CA C sing N N 395 THR CA CB sing N N 396 THR CA HA sing N N 397 THR C O doub N N 398 THR C OXT sing N N 399 THR CB OG1 sing N N 400 THR CB CG2 sing N N 401 THR CB HB sing N N 402 THR OG1 HG1 sing N N 403 THR CG2 HG21 sing N N 404 THR CG2 HG22 sing N N 405 THR CG2 HG23 sing N N 406 THR OXT HXT sing N N 407 TRP N CA sing N N 408 TRP N H sing N N 409 TRP N H2 sing N N 410 TRP CA C sing N N 411 TRP CA CB sing N N 412 TRP CA HA sing N N 413 TRP C O doub N N 414 TRP C OXT sing N N 415 TRP CB CG sing N N 416 TRP CB HB2 sing N N 417 TRP CB HB3 sing N N 418 TRP CG CD1 doub Y N 419 TRP CG CD2 sing Y N 420 TRP CD1 NE1 sing Y N 421 TRP CD1 HD1 sing N N 422 TRP CD2 CE2 doub Y N 423 TRP CD2 CE3 sing Y N 424 TRP NE1 CE2 sing Y N 425 TRP NE1 HE1 sing N N 426 TRP CE2 CZ2 sing Y N 427 TRP CE3 CZ3 doub Y N 428 TRP CE3 HE3 sing N N 429 TRP CZ2 CH2 doub Y N 430 TRP CZ2 HZ2 sing N N 431 TRP CZ3 CH2 sing Y N 432 TRP CZ3 HZ3 sing N N 433 TRP CH2 HH2 sing N N 434 TRP OXT HXT sing N N 435 TYR N CA sing N N 436 TYR N H sing N N 437 TYR N H2 sing N N 438 TYR CA C sing N N 439 TYR CA CB sing N N 440 TYR CA HA sing N N 441 TYR C O doub N N 442 TYR C OXT sing N N 443 TYR CB CG sing N N 444 TYR CB HB2 sing N N 445 TYR CB HB3 sing N N 446 TYR CG CD1 doub Y N 447 TYR CG CD2 sing Y N 448 TYR CD1 CE1 sing Y N 449 TYR CD1 HD1 sing N N 450 TYR CD2 CE2 doub Y N 451 TYR CD2 HD2 sing N N 452 TYR CE1 CZ doub Y N 453 TYR CE1 HE1 sing N N 454 TYR CE2 CZ sing Y N 455 TYR CE2 HE2 sing N N 456 TYR CZ OH sing N N 457 TYR OH HH sing N N 458 TYR OXT HXT sing N N 459 U OP3 P sing N N 460 U OP3 HOP3 sing N N 461 U P OP1 doub N N 462 U P OP2 sing N N 463 U P "O5'" sing N N 464 U OP2 HOP2 sing N N 465 U "O5'" "C5'" sing N N 466 U "C5'" "C4'" sing N N 467 U "C5'" "H5'" sing N N 468 U "C5'" "H5''" sing N N 469 U "C4'" "O4'" sing N N 470 U "C4'" "C3'" sing N N 471 U "C4'" "H4'" sing N N 472 U "O4'" "C1'" sing N N 473 U "C3'" "O3'" sing N N 474 U "C3'" "C2'" sing N N 475 U "C3'" "H3'" sing N N 476 U "O3'" "HO3'" sing N N 477 U "C2'" "O2'" sing N N 478 U "C2'" "C1'" sing N N 479 U "C2'" "H2'" sing N N 480 U "O2'" "HO2'" sing N N 481 U "C1'" N1 sing N N 482 U "C1'" "H1'" sing N N 483 U N1 C2 sing N N 484 U N1 C6 sing N N 485 U C2 O2 doub N N 486 U C2 N3 sing N N 487 U N3 C4 sing N N 488 U N3 H3 sing N N 489 U C4 O4 doub N N 490 U C4 C5 sing N N 491 U C5 C6 doub N N 492 U C5 H5 sing N N 493 U C6 H6 sing N N 494 VAL N CA sing N N 495 VAL N H sing N N 496 VAL N H2 sing N N 497 VAL CA C sing N N 498 VAL CA CB sing N N 499 VAL CA HA sing N N 500 VAL C O doub N N 501 VAL C OXT sing N N 502 VAL CB CG1 sing N N 503 VAL CB CG2 sing N N 504 VAL CB HB sing N N 505 VAL CG1 HG11 sing N N 506 VAL CG1 HG12 sing N N 507 VAL CG1 HG13 sing N N 508 VAL CG2 HG21 sing N N 509 VAL CG2 HG22 sing N N 510 VAL CG2 HG23 sing N N 511 VAL OXT HXT sing N N 512 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4M2Z 'double helix' 4M2Z 'a-form double helix' 4M2Z 'hairpin loop' 4M2Z 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C G 15 1_555 C C 10 1_555 -0.156 -0.158 -0.291 -11.593 2.011 -0.406 1 C_G16:C11_C C 16 ? C 11 ? 19 1 1 C A 16 1_555 C U 9 1_555 0.915 -0.130 -0.086 -4.628 -5.858 5.311 2 C_A17:U10_C C 17 ? C 10 ? 20 1 1 C G 17 1_555 C U 8 1_555 -1.898 -0.549 0.627 -0.977 -12.499 4.791 3 C_G18:U9_C C 18 ? C 9 ? 28 1 1 C U 18 1_555 C A 7 1_555 -0.133 -0.054 0.278 8.235 -14.365 2.933 4 C_U19:A8_C C 19 ? C 8 ? 20 1 1 C G 19 1_555 C C 6 1_555 0.071 -0.036 -0.236 3.382 -5.522 -1.256 5 C_G20:C7_C C 20 ? C 7 ? 19 1 1 C G 20 1_555 C U 5 1_555 -1.820 -0.508 -0.241 3.625 -5.633 4.140 6 C_G21:U6_C C 21 ? C 6 ? 28 1 1 C C 21 1_555 C G 4 1_555 0.536 -0.253 -0.279 -0.075 -9.775 -0.259 7 C_C22:G5_C C 22 ? C 5 ? 19 1 1 C C 22 1_555 C G 3 1_555 -0.028 -0.376 -0.571 -5.652 -6.183 -1.959 8 C_C23:G4_C C 23 ? C 4 ? 19 1 1 C U 23 1_555 C A 2 1_555 0.303 0.294 -0.131 -3.461 -9.571 9.089 9 C_U24:A3_C C 24 ? C 3 ? ? ? 1 C U 24 1_555 C A 1 1_555 0.092 -0.066 -0.415 2.110 -10.778 -3.508 10 C_U25:A2_C C 25 ? C 2 ? 20 1 1 C C 26 1_555 D G 27 1_555 0.038 -0.090 -0.346 7.856 -12.663 1.172 11 C_C27:G28_D C 27 ? D 28 ? 19 1 1 C G 27 1_555 D C 26 1_555 -0.116 -0.012 -0.059 -1.829 -12.116 2.678 12 C_G28:C27_D C 28 ? D 27 ? 19 1 1 D A 1 1_555 D U 24 1_555 -0.084 -0.130 -0.165 5.768 -5.201 -0.949 13 D_A2:U25_D D 2 ? D 25 ? 20 1 1 D A 2 1_555 D U 23 1_555 -0.552 -0.195 -0.194 -1.307 -14.201 2.574 14 D_A3:U24_D D 3 ? D 24 ? 20 1 1 D G 3 1_555 D C 22 1_555 0.137 0.017 -0.485 2.332 -1.321 -4.369 15 D_G4:C23_D D 4 ? D 23 ? 19 1 1 D G 4 1_555 D C 21 1_555 -0.163 -0.075 -0.505 -0.177 -9.935 1.717 16 D_G5:C22_D D 5 ? D 22 ? 19 1 1 D U 5 1_555 D G 20 1_555 1.663 -0.277 -0.760 15.597 -10.212 7.433 17 D_U6:G21_D D 6 ? D 21 ? 28 1 1 D C 6 1_555 D G 19 1_555 0.493 -0.119 -0.636 6.613 -6.298 -2.295 18 D_C7:G20_D D 7 ? D 20 ? 19 1 1 D A 7 1_555 D U 18 1_555 0.009 0.008 0.252 -7.051 -17.895 1.629 19 D_A8:U19_D D 8 ? D 19 ? 20 1 1 D U 8 1_555 D G 17 1_555 2.128 -0.150 0.492 -4.565 -8.129 7.209 20 D_U9:G18_D D 9 ? D 18 ? 28 1 1 D U 9 1_555 D A 16 1_555 0.056 0.103 -0.162 2.059 -4.647 5.161 21 D_U10:A17_D D 10 ? D 17 ? 20 1 1 D C 10 1_555 D G 15 1_555 -0.440 -0.231 0.406 9.848 21.988 -6.649 22 D_C11:G16_D D 11 ? D 16 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C G 15 1_555 C C 10 1_555 C A 16 1_555 C U 9 1_555 -0.263 -1.525 3.208 -2.374 5.658 31.210 -3.761 0.070 2.905 10.391 4.359 31.792 1 CC_G16A17:U10C11_CC C 16 ? C 11 ? C 17 ? C 10 ? 1 C A 16 1_555 C U 9 1_555 C G 17 1_555 C U 8 1_555 0.221 -1.884 2.800 -6.000 10.246 22.186 -6.524 -1.792 1.666 24.499 14.347 25.129 2 CC_A17G18:U9U10_CC C 17 ? C 10 ? C 18 ? C 9 ? 1 C G 17 1_555 C U 8 1_555 C U 18 1_555 C A 7 1_555 -0.388 -1.107 2.977 1.673 4.625 39.711 -2.089 0.738 2.818 6.777 -2.452 40.002 3 CC_G18U19:A8U9_CC C 18 ? C 9 ? C 19 ? C 8 ? 1 C U 18 1_555 C A 7 1_555 C G 19 1_555 C C 6 1_555 -0.699 -1.546 3.022 0.589 17.185 33.251 -4.270 1.156 2.000 27.838 -0.954 37.323 4 CC_U19G20:C7A8_CC C 19 ? C 8 ? C 20 ? C 7 ? 1 C G 19 1_555 C C 6 1_555 C G 20 1_555 C U 5 1_555 0.335 -1.749 2.987 -5.965 11.504 25.781 -5.559 -1.734 1.924 23.952 12.419 28.805 5 CC_G20G21:U6C7_CC C 20 ? C 7 ? C 21 ? C 6 ? 1 C G 20 1_555 C U 5 1_555 C C 21 1_555 C G 4 1_555 -0.477 -1.690 3.552 0.005 3.598 40.287 -2.874 0.691 3.395 5.211 -0.007 40.441 6 CC_G21C22:G5U6_CC C 21 ? C 6 ? C 22 ? C 5 ? 1 C C 21 1_555 C G 4 1_555 C C 22 1_555 C G 3 1_555 -0.247 -1.358 3.499 2.086 11.902 29.604 -4.613 0.824 2.740 22.166 -3.885 31.924 7 CC_C22C23:G4G5_CC C 22 ? C 5 ? C 23 ? C 4 ? 1 C C 22 1_555 C G 3 1_555 C U 23 1_555 C A 2 1_555 0.854 -1.362 3.329 -1.533 10.877 30.395 -4.272 -1.793 2.652 19.946 2.812 32.275 8 CC_C23U24:A3G4_CC C 23 ? C 4 ? C 24 ? C 3 ? 1 C U 23 1_555 C A 2 1_555 C U 24 1_555 C A 1 1_555 -0.733 -1.282 3.201 1.076 4.124 32.506 -2.947 1.475 2.995 7.327 -1.912 32.777 9 CC_U24U25:A2A3_CC C 24 ? C 3 ? C 25 ? C 2 ? 1 C U 24 1_555 C A 1 1_555 C C 26 1_555 D G 27 1_555 -1.338 -3.210 6.449 -3.057 19.186 49.707 -5.827 1.139 5.046 21.885 3.487 53.143 10 CC_U25C27:G28A2_DC C 25 ? C 2 ? C 27 ? D 28 ? 1 C C 26 1_555 D G 27 1_555 C G 27 1_555 D C 26 1_555 0.332 -1.515 3.601 -0.884 12.989 31.362 -4.714 -0.713 2.764 22.835 1.555 33.895 11 CC_C27G28:C27G28_DD C 27 ? D 28 ? C 28 ? D 27 ? 1 C G 27 1_555 D C 26 1_555 D A 1 1_555 D U 24 1_555 1.463 -3.168 6.273 4.130 15.977 52.330 -5.187 -1.143 5.264 17.624 -4.556 54.695 12 CD_G28A2:U25C27_DD C 28 ? D 27 ? D 2 ? D 25 ? 1 D A 1 1_555 D U 24 1_555 D A 2 1_555 D U 23 1_555 0.309 -1.669 3.433 1.154 9.893 31.166 -4.637 -0.354 2.796 17.851 -2.083 32.681 13 DD_A2A3:U24U25_DD D 2 ? D 25 ? D 3 ? D 24 ? 1 D A 2 1_555 D U 23 1_555 D G 3 1_555 D C 22 1_555 -0.807 -1.580 3.283 -1.208 9.286 30.805 -4.413 1.254 2.732 16.994 2.211 32.164 14 DD_A3G4:C23U24_DD D 3 ? D 24 ? D 4 ? D 23 ? 1 D G 3 1_555 D C 22 1_555 D G 4 1_555 D C 21 1_555 0.256 -1.373 3.394 1.221 12.093 31.482 -4.270 -0.250 2.706 21.320 -2.153 33.691 15 DD_G4G5:C22C23_DD D 4 ? D 23 ? D 5 ? D 22 ? 1 D G 4 1_555 D C 21 1_555 D U 5 1_555 D G 20 1_555 0.480 -1.166 2.938 2.673 4.530 37.078 -2.341 -0.438 2.808 7.080 -4.178 37.436 16 DD_G5U6:G21C22_DD D 5 ? D 22 ? D 6 ? D 21 ? 1 D U 5 1_555 D G 20 1_555 D C 6 1_555 D G 19 1_555 -0.788 -1.854 3.459 1.350 13.779 27.764 -5.937 1.717 2.266 26.714 -2.616 30.964 17 DD_U6C7:G20G21_DD D 6 ? D 21 ? D 7 ? D 20 ? 1 D C 6 1_555 D G 19 1_555 D A 7 1_555 D U 18 1_555 0.738 -1.516 3.345 -0.225 19.223 29.648 -5.066 -1.249 2.016 33.500 0.392 35.218 18 DD_C7A8:U19G20_DD D 7 ? D 20 ? D 8 ? D 19 ? 1 D A 7 1_555 D U 18 1_555 D U 8 1_555 D G 17 1_555 0.365 -1.250 3.149 -0.297 4.328 41.733 -2.172 -0.538 3.008 6.055 0.415 41.948 19 DD_A8U9:G18U19_DD D 8 ? D 19 ? D 9 ? D 18 ? 1 D U 8 1_555 D G 17 1_555 D U 9 1_555 D A 16 1_555 -0.029 -1.636 2.893 6.544 8.690 22.425 -5.868 1.629 2.039 20.841 -15.696 24.894 20 DD_U9U10:A17G18_DD D 9 ? D 18 ? D 10 ? D 17 ? 1 D U 9 1_555 D A 16 1_555 D C 10 1_555 D G 15 1_555 -1.057 -2.045 3.232 -6.328 13.633 26.253 -6.367 0.896 2.129 27.350 12.694 30.185 21 DD_U10C11:G16A17_DD D 10 ? D 17 ? D 11 ? D 16 ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'MAGNESIUM ION' MG 4 "CYTIDINE-5'-MONOPHOSPHATE" C 5 water HOH #