HEADER HORMONE 07-AUG-13 4M4F TITLE RADIATION DAMAGE STUDY OF CU T6-INSULIN - 0.01 MGY COMPND MOL_ID: 1; COMPND 2 MOLECULE: INSULIN; COMPND 3 CHAIN: A, C; COMPND 4 FRAGMENT: INSULIN A CHAIN (UNP RESIDUES 85-105); COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: INSULIN; COMPND 7 CHAIN: B, D; COMPND 8 FRAGMENT: INSULIN B CHAIN (UNP RESIDUES 25-54) SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 3 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 4 ORGANISM_TAXID: 9913; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: BOS TAURUS; SOURCE 7 ORGANISM_COMMON: BOVINE,COW,DOMESTIC CATTLE,DOMESTIC COW; SOURCE 8 ORGANISM_TAXID: 9913 KEYWDS HORMONE, COPPER BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.G.FRANKAER,P.HARRIS,K.STAHL REVDAT 4 07-MAR-18 4M4F 1 REMARK REVDAT 3 15-NOV-17 4M4F 1 REMARK REVDAT 2 12-FEB-14 4M4F 1 JRNL REVDAT 1 15-JAN-14 4M4F 0 JRNL AUTH C.G.FRANKAER,S.MOSSIN,K.STAHL,P.HARRIS JRNL TITL TOWARDS ACCURATE STRUCTURAL CHARACTERIZATION OF METAL JRNL TITL 2 CENTRES IN PROTEIN CRYSTALS: THE STRUCTURES OF NI AND CU T6 JRNL TITL 3 BOVINE INSULIN DERIVATIVES. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 110 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24419384 JRNL DOI 10.1107/S1399004713029040 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 16.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 6354 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.500 REMARK 3 FREE R VALUE TEST SET COUNT : 286 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 16.2799 - 2.3934 0.97 2962 159 0.1496 0.2110 REMARK 3 2 2.3934 - 1.9000 1.00 3106 127 0.2055 0.3000 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.220 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 814 REMARK 3 ANGLE : 1.024 1095 REMARK 3 CHIRALITY : 0.075 121 REMARK 3 PLANARITY : 0.004 142 REMARK 3 DIHEDRAL : 14.719 283 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 1:8 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.7159 -11.5192 -13.3793 REMARK 3 T TENSOR REMARK 3 T11: 0.4941 T22: 0.2834 REMARK 3 T33: 0.2102 T12: 0.0082 REMARK 3 T13: -0.0439 T23: -0.0128 REMARK 3 L TENSOR REMARK 3 L11: 6.0522 L22: 2.0033 REMARK 3 L33: 6.8719 L12: 1.2238 REMARK 3 L13: -1.7849 L23: 1.1332 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: 0.7810 S13: -0.5786 REMARK 3 S21: -0.4582 S22: 0.1153 S23: -0.1593 REMARK 3 S31: 1.6199 S32: -0.1119 S33: -0.0735 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 13:19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.1022 -12.0527 -4.5345 REMARK 3 T TENSOR REMARK 3 T11: 0.1629 T22: 0.2524 REMARK 3 T33: 0.2843 T12: -0.0718 REMARK 3 T13: -0.0753 T23: -0.0324 REMARK 3 L TENSOR REMARK 3 L11: 3.9001 L22: 8.6017 REMARK 3 L33: 6.0460 L12: -5.6647 REMARK 3 L13: 4.5326 L23: -6.6629 REMARK 3 S TENSOR REMARK 3 S11: 0.2451 S12: -0.0578 S13: -0.6617 REMARK 3 S21: -0.4930 S22: -0.0703 S23: 0.5221 REMARK 3 S31: 0.5489 S32: -0.3207 S33: -0.1575 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN B AND (RESID 9:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.5700 -7.1216 -1.4645 REMARK 3 T TENSOR REMARK 3 T11: 0.0817 T22: 0.0874 REMARK 3 T33: 0.0919 T12: -0.0240 REMARK 3 T13: -0.0305 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 7.5779 L22: 6.9875 REMARK 3 L33: 7.2001 L12: 1.5607 REMARK 3 L13: -6.3587 L23: -4.8344 REMARK 3 S TENSOR REMARK 3 S11: 0.1714 S12: -0.2278 S13: 0.3505 REMARK 3 S21: 0.0297 S22: -0.1405 S23: 0.0668 REMARK 3 S31: -0.1704 S32: 0.2638 S33: -0.0457 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND (RESID 23:27 ) OR CHAIN D AND (RESID REMARK 3 23:27 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2352 -17.0580 0.1026 REMARK 3 T TENSOR REMARK 3 T11: 0.2649 T22: 0.1177 REMARK 3 T33: 0.1623 T12: -0.0639 REMARK 3 T13: -0.0629 T23: 0.0315 REMARK 3 L TENSOR REMARK 3 L11: 5.8295 L22: 2.5092 REMARK 3 L33: 1.4264 L12: -0.8770 REMARK 3 L13: -0.6049 L23: -0.8287 REMARK 3 S TENSOR REMARK 3 S11: 0.0393 S12: 0.1776 S13: -0.4633 REMARK 3 S21: -0.2402 S22: 0.1283 S23: 0.3285 REMARK 3 S31: 0.9502 S32: -0.3191 S33: -0.1424 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN C AND (RESID 1:8 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.3252 -14.3792 13.0543 REMARK 3 T TENSOR REMARK 3 T11: 0.3785 T22: 0.3615 REMARK 3 T33: 0.2360 T12: 0.1026 REMARK 3 T13: 0.0099 T23: 0.1085 REMARK 3 L TENSOR REMARK 3 L11: 3.5680 L22: 5.4566 REMARK 3 L33: 2.2693 L12: 0.9757 REMARK 3 L13: 2.7931 L23: 1.4203 REMARK 3 S TENSOR REMARK 3 S11: -0.3983 S12: -1.2397 S13: -0.5697 REMARK 3 S21: 0.9389 S22: 0.3718 S23: 0.0836 REMARK 3 S31: 0.9691 S32: 0.1318 S33: 0.0092 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN C AND (RESID 13:19 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4094 -18.1886 4.3239 REMARK 3 T TENSOR REMARK 3 T11: 0.2954 T22: 0.2449 REMARK 3 T33: 0.2788 T12: 0.0928 REMARK 3 T13: 0.0342 T23: -0.0336 REMARK 3 L TENSOR REMARK 3 L11: 1.9088 L22: 7.8065 REMARK 3 L33: 8.2103 L12: -1.7370 REMARK 3 L13: -2.3548 L23: 1.8217 REMARK 3 S TENSOR REMARK 3 S11: 0.2032 S12: -0.1836 S13: 0.4225 REMARK 3 S21: -0.0235 S22: 0.4541 S23: -0.4489 REMARK 3 S31: 0.5130 S32: 1.0638 S33: -0.5828 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN D AND (RESID 9:18 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4435 -9.4428 0.7457 REMARK 3 T TENSOR REMARK 3 T11: 0.1102 T22: 0.1092 REMARK 3 T33: 0.1325 T12: -0.0097 REMARK 3 T13: -0.0361 T23: 0.0020 REMARK 3 L TENSOR REMARK 3 L11: 7.8935 L22: 8.4562 REMARK 3 L33: 3.7597 L12: -4.7739 REMARK 3 L13: -5.3326 L23: 2.2913 REMARK 3 S TENSOR REMARK 3 S11: 0.2138 S12: 0.1500 S13: 0.2397 REMARK 3 S21: -0.1997 S22: 0.1218 S23: -0.2511 REMARK 3 S31: 0.0836 S32: -0.0850 S33: -0.3569 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M4F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 23-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081452. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.1 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : CU FINE FOCUS REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : MULTILAYERED MIRRORS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : AGILENT ATLAS CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : CRYSALISPRO REMARK 200 DATA SCALING SOFTWARE : CRYSALISPRO REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 6358 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 16.830 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.97 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.85 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05M SODIUM CITRATE, 15%(V/V) REMARK 280 ACETONE, 7.5MM COPPER(II)ACETATE, PH 7.1, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 40.56500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.42021 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 11.15633 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 40.56500 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 23.42021 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 11.15633 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 40.56500 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 23.42021 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 11.15633 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 46.84043 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 22.31267 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 46.84043 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 22.31267 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 46.84043 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 22.31267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1520 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3560 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -14.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 3580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CU CU B 101 LIES ON A SPECIAL POSITION. REMARK 375 CU CU D 101 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 222 LIES ON A SPECIAL POSITION. REMARK 375 HOH D 230 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 PHE B 1 REMARK 465 ALA B 30 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH D 219 O HOH D 229 2.03 REMARK 500 O GLN D 4 O HOH D 216 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH B 203 O HOH B 206 2555 2.00 REMARK 500 O HOH A 102 O HOH B 201 1554 2.13 REMARK 500 O HOH B 218 O HOH D 223 3555 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 9 -129.04 -115.83 REMARK 500 PRO B 28 -170.14 -69.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 101 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 10 NE2 REMARK 620 2 HOH B 203 O 162.1 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU D 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M4H RELATED DB: PDB REMARK 900 RELATED ID: 4M4I RELATED DB: PDB REMARK 900 RELATED ID: 4M4J RELATED DB: PDB REMARK 900 RELATED ID: 4M4L RELATED DB: PDB REMARK 900 RELATED ID: 4M4M RELATED DB: PDB DBREF 4M4F A 1 21 UNP P01317 INS_BOVIN 85 105 DBREF 4M4F B 1 30 UNP P01317 INS_BOVIN 25 54 DBREF 4M4F C 1 21 UNP P01317 INS_BOVIN 85 105 DBREF 4M4F D 1 30 UNP P01317 INS_BOVIN 25 54 SEQRES 1 A 21 GLY ILE VAL GLU GLN CYS CYS ALA SER VAL CYS SER LEU SEQRES 2 A 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 B 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 B 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 B 30 THR PRO LYS ALA SEQRES 1 C 21 GLY ILE VAL GLU GLN CYS CYS ALA SER VAL CYS SER LEU SEQRES 2 C 21 TYR GLN LEU GLU ASN TYR CYS ASN SEQRES 1 D 30 PHE VAL ASN GLN HIS LEU CYS GLY SER HIS LEU VAL GLU SEQRES 2 D 30 ALA LEU TYR LEU VAL CYS GLY GLU ARG GLY PHE PHE TYR SEQRES 3 D 30 THR PRO LYS ALA HET CU B 101 1 HET CU D 101 1 HETNAM CU COPPER (II) ION FORMUL 5 CU 2(CU 2+) FORMUL 7 HOH *68(H2 O) HELIX 1 1 GLY A 1 SER A 9 1 9 HELIX 2 2 SER A 12 GLU A 17 1 6 HELIX 3 3 ASN A 18 CYS A 20 5 3 HELIX 4 4 GLY B 8 GLY B 20 1 13 HELIX 5 5 GLU B 21 GLY B 23 5 3 HELIX 6 6 ILE C 2 CYS C 7 1 6 HELIX 7 7 SER C 12 GLU C 17 1 6 HELIX 8 8 ASN C 18 CYS C 20 5 3 HELIX 9 9 GLY D 8 GLY D 20 1 13 HELIX 10 10 GLU D 21 GLY D 23 5 3 SHEET 1 A 2 PHE B 24 TYR B 26 0 SHEET 2 A 2 PHE D 24 TYR D 26 -1 O PHE D 24 N TYR B 26 SSBOND 1 CYS A 6 CYS A 11 1555 1555 2.03 SSBOND 2 CYS A 7 CYS B 7 1555 1555 2.01 SSBOND 3 CYS A 20 CYS B 19 1555 1555 2.04 SSBOND 4 CYS C 6 CYS C 11 1555 1555 2.04 SSBOND 5 CYS C 7 CYS D 7 1555 1555 2.02 SSBOND 6 CYS C 20 CYS D 19 1555 1555 2.02 LINK NE2 HIS D 10 CU CU D 101 1555 1555 2.00 LINK NE2 HIS B 10 CU CU B 101 1555 1555 2.01 LINK CU CU B 101 O HOH B 203 1555 1555 1.93 SITE 1 AC1 2 HIS B 10 HOH B 203 SITE 1 AC2 2 HIS D 10 HOH D 229 CRYST1 81.130 81.130 33.469 90.00 90.00 120.00 H 3 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012326 0.007116 0.000000 0.00000 SCALE2 0.000000 0.014233 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029878 0.00000