HEADER MEMBRANE PROTEIN 08-AUG-13 4M5B TITLE CRYSTAL STRUCTURE OF AN TRUNCATED TRANSITION METAL TRANSPORTER COMPND MOL_ID: 1; COMPND 2 MOLECULE: COBALAMIN BIOSYNTHESIS PROTEIN CBIM; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 1-209; COMPND 5 SYNONYM: TTNIKM2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOANAEROBACTER TENGCONGENSIS; SOURCE 3 ORGANISM_TAXID: 273068; SOURCE 4 STRAIN: MB4; SOURCE 5 GENE: CBIM2, TTE1695; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS MEMBRANE PROTEIN, TRANSPORTER, NICKEL EXPDTA X-RAY DIFFRACTION AUTHOR Y.YU REVDAT 2 20-MAR-24 4M5B 1 REMARK SEQADV LINK REVDAT 1 26-MAR-14 4M5B 0 JRNL AUTH Y.YU,M.Z.ZHOU,F.KIRSCH,C.Q.XU,L.ZHANG,Y.WANG,Z.JIANG,N.WANG, JRNL AUTH 2 J.LI,T.EITINGER,M.J.YANG JRNL TITL PLANAR SUBSTRATE-BINDING SITE DICTATES THE SPECIFICITY OF JRNL TITL 2 ECF-TYPE NICKEL/COBALT TRANSPORTERS JRNL REF CELL RES. V. 24 267 2014 JRNL REFN ISSN 1001-0602 JRNL PMID 24366337 JRNL DOI 10.1038/CR.2013.172 REMARK 2 REMARK 2 RESOLUTION. 1.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.41 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 34877 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.4137 - 4.3058 0.98 2712 127 0.2008 0.2101 REMARK 3 2 4.3058 - 3.4195 1.00 2622 169 0.1748 0.2028 REMARK 3 3 3.4195 - 2.9878 1.00 2660 123 0.1695 0.1752 REMARK 3 4 2.9878 - 2.7148 1.00 2572 157 0.1622 0.1807 REMARK 3 5 2.7148 - 2.5204 1.00 2581 144 0.1599 0.1752 REMARK 3 6 2.5204 - 2.3718 1.00 2581 144 0.1469 0.1613 REMARK 3 7 2.3718 - 2.2531 0.99 2570 127 0.1593 0.2032 REMARK 3 8 2.2531 - 2.1551 0.99 2546 157 0.1600 0.1900 REMARK 3 9 2.1551 - 2.0721 0.99 2587 122 0.1838 0.2251 REMARK 3 10 2.0721 - 2.0006 0.98 2535 144 0.2089 0.2533 REMARK 3 11 2.0006 - 1.9381 0.97 2515 112 0.2450 0.2695 REMARK 3 12 1.9381 - 1.8827 0.94 2407 130 0.2669 0.2597 REMARK 3 13 1.8827 - 1.8332 0.86 2237 96 0.2992 0.3395 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.850 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.72 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1800 REMARK 3 ANGLE : 1.023 2390 REMARK 3 CHIRALITY : 0.069 278 REMARK 3 PLANARITY : 0.006 278 REMARK 3 DIHEDRAL : 13.659 681 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ALL REMARK 3 ORIGIN FOR THE GROUP (A): 94.3478 108.6012 17.3625 REMARK 3 T TENSOR REMARK 3 T11: 0.2819 T22: 0.2157 REMARK 3 T33: 0.2027 T12: -0.0396 REMARK 3 T13: 0.0171 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 1.1659 L22: 2.3007 REMARK 3 L33: 2.3148 L12: 0.1953 REMARK 3 L13: 0.4676 L23: 0.2514 REMARK 3 S TENSOR REMARK 3 S11: -0.0382 S12: 0.0443 S13: 0.0289 REMARK 3 S21: -0.2423 S22: 0.0152 S23: 0.0351 REMARK 3 S31: 0.1488 S32: 0.0033 S33: 0.0247 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4M5B COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 30-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1000081484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : SI 111 CHANNEL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34896 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.830 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELXS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.10 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 35% PEG 300, 0.05M GLYCINE, 0.1M REMARK 280 SODIUM CHLORIDE, PH 9.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 291.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 60.45700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 60.45700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 32.18550 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 32.18550 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 60.45700 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 32.18550 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.58000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 60.45700 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 32.18550 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.58000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 448 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 469 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A 215 REMARK 465 HIS A 216 REMARK 465 HIS A 217 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 213 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 214 CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 HEZ A 313 O HOH A 462 1.87 REMARK 500 NZ LYS A 132 O HOH A 468 2.06 REMARK 500 O6 HEZ A 305 O HOH A 466 2.08 REMARK 500 OE1 GLU A 5 O HOH A 440 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 64 -95.43 -111.22 REMARK 500 PHE A 115 -60.88 -127.58 REMARK 500 TYR A 174 -129.75 -125.11 REMARK 500 HIS A 212 -17.13 81.38 REMARK 500 HIS A 213 -31.81 -162.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 HEZ A 315 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 324 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 MET A 1 N REMARK 620 2 HIS A 2 N 78.2 REMARK 620 3 HIS A 2 ND1 172.0 93.9 REMARK 620 4 HIS A 67 NE2 94.0 171.9 93.9 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 313 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 314 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 315 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 316 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 317 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 318 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 319 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEZ A 320 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 324 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M58 RELATED DB: PDB REMARK 900 RELATED ID: 4M5C RELATED DB: PDB DBREF 4M5B A 1 209 UNP Q8R9C0 Q8R9C0_THETN 1 209 SEQADV 4M5B LEU A 210 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B GLU A 211 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 212 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 213 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 214 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 215 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 216 UNP Q8R9C0 EXPRESSION TAG SEQADV 4M5B HIS A 217 UNP Q8R9C0 EXPRESSION TAG SEQRES 1 A 217 MET HIS ILE PRO GLU GLY TYR LEU SER PRO GLN THR CYS SEQRES 2 A 217 ALA VAL MET GLY ALA ALA MET VAL PRO VAL LEU THR VAL SEQRES 3 A 217 ALA ALA LYS LYS VAL ASN LYS SER PHE ASP LYS LYS ASP SEQRES 4 A 217 VAL PRO ALA MET ALA ILE GLY SER ALA PHE ALA PHE THR SEQRES 5 A 217 ILE MET MET PHE ASN VAL PRO ILE PRO GLY GLY THR THR SEQRES 6 A 217 ALA HIS ALA ILE GLY ALA THR LEU LEU ALA THR THR LEU SEQRES 7 A 217 GLY PRO TRP ALA ALA SER ILE SER LEU THR LEU ALA LEU SEQRES 8 A 217 PHE ILE GLN ALA LEU LEU PHE GLY ASP GLY GLY ILE LEU SEQRES 9 A 217 ALA LEU GLY ALA ASN SER PHE ASN MET ALA PHE ILE ALA SEQRES 10 A 217 PRO PHE VAL GLY TYR GLY ILE TYR ARG LEU MET LEU SER SEQRES 11 A 217 LEU LYS LEU ASN LYS VAL LEU SER SER ALA ILE GLY GLY SEQRES 12 A 217 TYR VAL GLY ILE ASN ALA ALA ALA LEU ALA THR ALA ILE SEQRES 13 A 217 GLU LEU GLY LEU GLN PRO LEU LEU PHE HIS THR ALA ASN SEQRES 14 A 217 GLY THR PRO LEU TYR PHE PRO TYR GLY LEU ASN VAL ALA SEQRES 15 A 217 ILE PRO ALA MET MET PHE ALA HIS LEU THR VAL ALA GLY SEQRES 16 A 217 ILE VAL GLU ALA VAL ILE THR GLY LEU VAL VAL TYR TYR SEQRES 17 A 217 LEU LEU GLU HIS HIS HIS HIS HIS HIS HET HEZ A 301 8 HET HEZ A 302 8 HET HEZ A 303 8 HET HEZ A 304 8 HET HEZ A 305 8 HET HEZ A 306 8 HET HEZ A 307 8 HET HEZ A 308 8 HET HEZ A 309 8 HET HEZ A 310 8 HET HEZ A 311 8 HET HEZ A 312 8 HET HEZ A 313 8 HET HEZ A 314 8 HET HEZ A 315 5 HET HEZ A 316 8 HET HEZ A 317 8 HET HEZ A 318 8 HET HEZ A 319 8 HET HEZ A 320 8 HET HEZ A 321 8 HET HEZ A 322 8 HET HEZ A 323 8 HET NI A 324 1 HETNAM HEZ HEXANE-1,6-DIOL HETNAM NI NICKEL (II) ION FORMUL 2 HEZ 23(C6 H14 O2) FORMUL 25 NI NI 2+ FORMUL 26 HOH *87(H2 O) HELIX 1 1 SER A 9 PHE A 35 1 27 HELIX 2 2 ASP A 36 LYS A 38 5 3 HELIX 3 3 ASP A 39 MET A 55 1 17 HELIX 4 4 GLY A 70 GLY A 79 1 10 HELIX 5 5 GLY A 79 GLY A 99 1 21 HELIX 6 6 ALA A 105 PHE A 115 1 11 HELIX 7 7 PHE A 115 LEU A 131 1 17 HELIX 8 8 ASN A 134 PHE A 165 1 32 HELIX 9 9 GLY A 178 VAL A 193 1 16 HELIX 10 10 VAL A 193 HIS A 212 1 20 SHEET 1 A 2 VAL A 58 PRO A 59 0 SHEET 2 A 2 THR A 65 ALA A 66 -1 O ALA A 66 N VAL A 58 LINK N MET A 1 NI NI A 324 1555 1555 2.35 LINK N HIS A 2 NI NI A 324 1555 1555 2.22 LINK ND1 HIS A 2 NI NI A 324 1555 1555 2.33 LINK NE2 HIS A 67 NI NI A 324 1555 1555 2.29 SITE 1 AC1 1 GLU A 157 SITE 1 AC2 2 TYR A 144 HOH A 466 SITE 1 AC3 1 LEU A 204 SITE 1 AC4 1 HOH A 461 SITE 1 AC5 4 LYS A 37 PRO A 41 LEU A 96 GLY A 99 SITE 1 AC6 4 TYR A 7 PRO A 176 HOH A 438 HOH A 470 SITE 1 AC7 3 PHE A 49 THR A 77 LEU A 78 SITE 1 AC8 3 ILE A 116 PHE A 119 HOH A 462 SITE 1 AC9 1 HEZ A 315 SITE 1 BC1 1 HEZ A 314 SITE 1 BC2 3 PRO A 10 ALA A 14 LEU A 104 SITE 1 BC3 1 HEZ A 318 SITE 1 BC4 3 LEU A 96 HEZ A 317 HOH A 484 SITE 1 BC5 3 PRO A 162 HIS A 166 GLY A 170 SITE 1 BC6 5 PRO A 61 VAL A 181 ALA A 185 HOH A 447 SITE 2 BC6 5 HOH A 453 SITE 1 BC7 4 MET A 1 HIS A 2 THR A 65 HIS A 67 CRYST1 64.371 103.160 120.914 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015535 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008270 0.00000