data_4M5S # _entry.id 4M5S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4M5S RCSB RCSB081501 WWPDB D_1000081501 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4M5T _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4M5S _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-08-08 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Laganowsky, A.' 1 'Cascio, D.' 2 'Sawaya, M.R.' 3 'Eisenberg, D.' 4 # _citation.id primary _citation.title 'The structured core domain of alpha B-crystallin can prevent amyloid fibrillation and associated toxicity.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first E1562 _citation.page_last E1570 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24711386 _citation.pdbx_database_id_DOI 10.1073/pnas.1322673111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hochberg, G.K.' 1 primary 'Ecroyd, H.' 2 primary 'Liu, C.' 3 primary 'Cox, D.' 4 primary 'Cascio, D.' 5 primary 'Sawaya, M.R.' 6 primary 'Collier, M.P.' 7 primary 'Stroud, J.' 8 primary 'Carver, J.A.' 9 primary 'Baldwin, A.J.' 10 primary 'Robinson, C.V.' 11 primary 'Eisenberg, D.S.' 12 primary 'Benesch, J.L.' 13 primary 'Laganowsky, A.' 14 # _cell.length_a 35.380 _cell.length_b 47.860 _cell.length_c 122.840 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4M5S _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.entry_id 4M5S _symmetry.Int_Tables_number 23 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Alpha-crystallin B chain' 9957.241 1 ? ? 'core domain (UNP residues 68-153)' ? 2 polymer man 'Alpha-crystallin B chain' 1173.320 1 ? ? 'C-terminal peptide (UNP residues 156-164)' ? 3 non-polymer syn 'SUCCINIC ACID' 118.088 1 ? ? ? ? 4 water nat water 18.015 70 ? ? ? ? # loop_ _entity_name_com.entity_id _entity_name_com.name 1 'Alpha(B)-crystallin, Heat shock protein beta-5, HspB5, Renal carcinoma antigen NY-REN-27, Rosenthal fiber component' 2 'Alpha(B)-crystallin, Heat shock protein beta-5, HspB5, Renal carcinoma antigen NY-REN-27, Rosenthal fiber component' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVN GPRKQVS ; ;GMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVN GPRKQVS ; A ? 2 'polypeptide(L)' no no GERTIPITRE GERTIPITRE B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MET n 1 3 ARG n 1 4 LEU n 1 5 GLU n 1 6 LYS n 1 7 ASP n 1 8 ARG n 1 9 PHE n 1 10 SER n 1 11 VAL n 1 12 ASN n 1 13 LEU n 1 14 ASP n 1 15 VAL n 1 16 LYS n 1 17 HIS n 1 18 PHE n 1 19 SER n 1 20 PRO n 1 21 GLU n 1 22 GLU n 1 23 LEU n 1 24 LYS n 1 25 VAL n 1 26 LYS n 1 27 VAL n 1 28 LEU n 1 29 GLY n 1 30 ASP n 1 31 VAL n 1 32 ILE n 1 33 GLU n 1 34 VAL n 1 35 HIS n 1 36 GLY n 1 37 LYS n 1 38 HIS n 1 39 GLU n 1 40 GLU n 1 41 ARG n 1 42 GLN n 1 43 ASP n 1 44 GLU n 1 45 HIS n 1 46 GLY n 1 47 PHE n 1 48 ILE n 1 49 SER n 1 50 ARG n 1 51 GLU n 1 52 PHE n 1 53 HIS n 1 54 ARG n 1 55 LYS n 1 56 TYR n 1 57 ARG n 1 58 ILE n 1 59 PRO n 1 60 ALA n 1 61 ASP n 1 62 VAL n 1 63 ASP n 1 64 PRO n 1 65 LEU n 1 66 THR n 1 67 ILE n 1 68 THR n 1 69 SER n 1 70 SER n 1 71 LEU n 1 72 SER n 1 73 SER n 1 74 ASP n 1 75 GLY n 1 76 VAL n 1 77 LEU n 1 78 THR n 1 79 VAL n 1 80 ASN n 1 81 GLY n 1 82 PRO n 1 83 ARG n 1 84 LYS n 1 85 GLN n 1 86 VAL n 1 87 SER n 2 1 GLY n 2 2 GLU n 2 3 ARG n 2 4 THR n 2 5 ILE n 2 6 PRO n 2 7 ILE n 2 8 THR n 2 9 ARG n 2 10 GLU n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? human ? 'CRYA2, CRYAB' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3) Rosetta 2' ? ? ? ? ? ? ? plasmid ? ? ? pET28 ? ? 2 1 sample ? ? ? human ? 'CRYA2, CRYAB' ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 'Escherichia coli' 469008 ? ? ? ? ? ? 'BL21(DE3)' ? ? ? ? ? ? ? plasmid ? ? ? pET15-MBP ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP CRYAB_HUMAN P02511 1 ;MRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKYRIPADVDPLTITSSLSSDGVLTVNG PRKQVS ; 68 ? 2 UNP CRYAB_HUMAN P02511 2 ERTIPITRE 156 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4M5S A 2 ? 87 ? P02511 68 ? 153 ? 68 153 2 2 4M5S B 2 ? 10 ? P02511 156 ? 164 ? 156 164 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4M5S GLY A 1 ? UNP P02511 ? ? 'EXPRESSION TAG' 67 1 2 4M5S GLY B 1 ? UNP P02511 ? ? 'EXPRESSION TAG' 155 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SIN non-polymer . 'SUCCINIC ACID' ? 'C4 H6 O4' 118.088 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4M5S _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 47.34 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.temp 298 _exptl_crystal_grow.pdbx_details '0.1 M SPG, pH 6.0, 25% PEG1500, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2010-12-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Cryo-Cooled double crystal Si(111)' _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9794 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength_list 0.9794 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 4M5S _reflns.d_resolution_high 1.370 _reflns.number_obs 21884 _reflns.pdbx_Rmerge_I_obs 0.042 _reflns.pdbx_netI_over_sigmaI 25.13 _reflns.percent_possible_obs 97.5 _reflns.B_iso_Wilson_estimate 15.640 _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 19.569 _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.370 1.410 7360 ? 1558 0.486 3.330 ? ? ? ? ? 96.0 1 1 1.410 1.440 12480 ? 1529 0.485 4.710 ? ? ? ? ? 97.0 2 1 1.440 1.490 12432 ? 1531 0.368 6.270 ? ? ? ? ? 97.1 3 1 1.490 1.530 11866 ? 1458 0.265 8.470 ? ? ? ? ? 97.4 4 1 1.530 1.580 11480 ? 1413 0.186 11.260 ? ? ? ? ? 97.6 5 1 1.580 1.640 11216 ? 1380 0.149 13.740 ? ? ? ? ? 97.7 6 1 1.640 1.700 11110 ? 1366 0.121 16.440 ? ? ? ? ? 98.3 7 1 1.700 1.770 10393 ? 1290 0.094 20.000 ? ? ? ? ? 98.5 8 1 1.770 1.850 10183 ? 1262 0.069 26.000 ? ? ? ? ? 98.1 9 1 1.850 1.940 9438 ? 1181 0.052 32.720 ? ? ? ? ? 98.7 10 1 1.940 2.040 9016 ? 1136 0.043 37.630 ? ? ? ? ? 98.9 11 1 2.040 2.170 8544 ? 1094 0.040 40.920 ? ? ? ? ? 98.8 12 1 2.170 2.320 7859 ? 1022 0.037 44.030 ? ? ? ? ? 98.9 13 1 2.320 2.500 7325 ? 963 0.036 45.560 ? ? ? ? ? 99.4 14 1 2.500 2.740 6759 ? 898 0.036 47.820 ? ? ? ? ? 99.6 15 1 2.740 3.060 5977 ? 811 0.031 50.020 ? ? ? ? ? 99.8 16 1 3.060 3.540 5436 ? 722 0.030 52.870 ? ? ? ? ? 98.9 17 1 3.540 4.330 4137 ? 596 0.030 51.270 ? ? ? ? ? 96.0 18 1 4.330 6.130 2850 ? 443 0.027 49.380 ? ? ? ? ? 89.0 19 1 6.130 ? 1289 ? 231 0.031 45.230 ? ? ? ? ? 76.5 20 1 # _refine.entry_id 4M5S _refine.ls_d_res_high 1.370 _refine.ls_d_res_low 19.569 _refine.pdbx_ls_sigma_F 1.990 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.57 _refine.ls_number_reflns_obs 21882 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method ? _refine.pdbx_R_Free_selection_details ? _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1579 _refine.ls_R_factor_R_work 0.1563 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1874 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 1095 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 24.1899 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.1200 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8864 _refine.B_iso_max 77.510 _refine.B_iso_min 8.130 _refine.pdbx_overall_phase_error 17.9200 _refine.occupancy_max 1.000 _refine.occupancy_min 0.240 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 775 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 8 _refine_hist.number_atoms_solvent 70 _refine_hist.number_atoms_total 853 _refine_hist.d_res_high 1.370 _refine_hist.d_res_low 19.569 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 850 0.016 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 1148 1.640 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 126 0.135 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 152 0.008 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 341 15.965 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 1.3700 1.4323 8 96.0 2519 . 0.1743 0.2392 . 133 . 2652 . . 'X-RAY DIFFRACTION' 1.4323 1.5078 8 97.0 2538 . 0.1399 0.2060 . 134 . 2672 . . 'X-RAY DIFFRACTION' 1.5078 1.6023 8 98.0 2565 . 0.1183 0.1519 . 135 . 2700 . . 'X-RAY DIFFRACTION' 1.6023 1.7259 8 98.0 2588 . 0.1188 0.1764 . 136 . 2724 . . 'X-RAY DIFFRACTION' 1.7259 1.8995 8 98.0 2607 . 0.1215 0.1648 . 137 . 2744 . . 'X-RAY DIFFRACTION' 1.8995 2.1740 8 99.0 2620 . 0.1295 0.1644 . 138 . 2758 . . 'X-RAY DIFFRACTION' 2.1740 2.7378 8 99.0 2681 . 0.1643 0.1912 . 141 . 2822 . . 'X-RAY DIFFRACTION' 2.7378 19.5706 8 95.0 2669 . 0.1816 0.1992 . 141 . 2810 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4M5S _struct.title 'Human alphaB crystallin core domain in complex with C-terminal peptide' _struct.pdbx_descriptor 'Alpha-crystallin B chain' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4M5S _struct_keywords.text 'small heat shock protein, amyloid, CHAPERONE' _struct_keywords.pdbx_keywords CHAPERONE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 19 ? GLU A 21 ? SER A 85 GLU A 87 5 ? 3 HELX_P HELX_P2 2 ASP A 63 ? ILE A 67 ? ASP A 129 ILE A 133 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 2 ? LEU A 4 ? MET A 68 LEU A 70 A 2 ARG A 8 ? ASP A 14 ? ARG A 74 ASP A 80 A 3 VAL A 76 ? PRO A 82 ? VAL A 142 PRO A 148 A 4 THR A 68 ? LEU A 71 ? THR A 134 LEU A 137 A 5 ARG B 3 ? THR B 4 ? ARG B 157 THR B 158 B 1 GLY A 46 ? ARG A 57 ? GLY A 112 ARG A 123 B 2 VAL A 31 ? ASP A 43 ? VAL A 97 ASP A 109 B 3 LEU A 23 ? LEU A 28 ? LEU A 89 LEU A 94 B 4 ILE B 7 ? THR B 8 ? ILE B 161 THR B 162 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 3 ? N ARG A 69 O SER A 10 ? O SER A 76 A 2 3 N LEU A 13 ? N LEU A 79 O LEU A 77 ? O LEU A 143 A 3 4 O THR A 78 ? O THR A 144 N SER A 70 ? N SER A 136 A 4 5 N LEU A 71 ? N LEU A 137 O ARG B 3 ? O ARG B 157 B 1 2 O ARG A 50 ? O ARG A 116 N HIS A 38 ? N HIS A 104 B 2 3 O GLU A 33 ? O GLU A 99 N LYS A 26 ? N LYS A 92 B 3 4 N VAL A 25 ? N VAL A 91 O THR B 8 ? O THR B 162 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE SIN A 201' AC2 Software ? ? ? ? 34 'BINDING SITE FOR CHAIN B OF ALPHA-CRYSTALLIN B CHAIN' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 HIS A 17 ? HIS A 83 . ? 1_555 ? 2 AC1 4 HIS A 17 ? HIS A 83 . ? 3_555 ? 3 AC1 4 ARG A 50 ? ARG A 116 . ? 3_555 ? 4 AC1 4 ARG A 50 ? ARG A 116 . ? 1_555 ? 5 AC2 34 ARG A 3 ? ARG A 69 . ? 2_555 ? 6 AC2 34 PRO A 20 ? PRO A 86 . ? 1_555 ? 7 AC2 34 VAL A 25 ? VAL A 91 . ? 1_555 ? 8 AC2 34 LYS A 26 ? LYS A 92 . ? 1_555 ? 9 AC2 34 VAL A 27 ? VAL A 93 . ? 1_555 ? 10 AC2 34 LEU A 28 ? LEU A 94 . ? 1_555 ? 11 AC2 34 LYS A 55 ? LYS A 121 . ? 2_565 ? 12 AC2 34 PRO A 64 ? PRO A 130 . ? 1_555 ? 13 AC2 34 LEU A 65 ? LEU A 131 . ? 1_555 ? 14 AC2 34 ILE A 67 ? ILE A 133 . ? 1_555 ? 15 AC2 34 SER A 69 ? SER A 135 . ? 1_555 ? 16 AC2 34 SER A 70 ? SER A 136 . ? 1_555 ? 17 AC2 34 LEU A 71 ? LEU A 137 . ? 1_555 ? 18 AC2 34 SER A 72 ? SER A 138 . ? 1_555 ? 19 AC2 34 ARG A 83 ? ARG A 149 . ? 8_555 ? 20 AC2 34 LYS A 84 ? LYS A 150 . ? 8_555 ? 21 AC2 34 GLN A 85 ? GLN A 151 . ? 8_555 ? 22 AC2 34 VAL A 86 ? VAL A 152 . ? 8_555 ? 23 AC2 34 HOH D . ? HOH A 305 . ? 8_555 ? 24 AC2 34 HOH D . ? HOH A 307 . ? 1_555 ? 25 AC2 34 HOH D . ? HOH A 332 . ? 2_555 ? 26 AC2 34 HOH D . ? HOH A 342 . ? 2_565 ? 27 AC2 34 GLY B 1 ? GLY B 155 . ? 1_555 ? 28 AC2 34 HOH E . ? HOH B 201 . ? 1_555 ? 29 AC2 34 HOH E . ? HOH B 202 . ? 1_555 ? 30 AC2 34 HOH E . ? HOH B 203 . ? 1_555 ? 31 AC2 34 HOH E . ? HOH B 204 . ? 1_555 ? 32 AC2 34 HOH E . ? HOH B 205 . ? 1_555 ? 33 AC2 34 HOH E . ? HOH B 206 . ? 1_555 ? 34 AC2 34 HOH E . ? HOH B 207 . ? 1_555 ? 35 AC2 34 HOH E . ? HOH B 208 . ? 1_555 ? 36 AC2 34 HOH E . ? HOH B 209 . ? 1_555 ? 37 AC2 34 HOH E . ? HOH B 210 . ? 1_555 ? 38 AC2 34 HOH E . ? HOH B 212 . ? 1_555 ? # _atom_sites.entry_id 4M5S _atom_sites.fract_transf_matrix[1][1] 0.028265 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020894 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008141 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 67 67 GLY GLY A . n A 1 2 MET 2 68 68 MET MET A . n A 1 3 ARG 3 69 69 ARG ARG A . n A 1 4 LEU 4 70 70 LEU LEU A . n A 1 5 GLU 5 71 71 GLU GLU A . n A 1 6 LYS 6 72 72 LYS LYS A . n A 1 7 ASP 7 73 73 ASP ASP A . n A 1 8 ARG 8 74 74 ARG ARG A . n A 1 9 PHE 9 75 75 PHE PHE A . n A 1 10 SER 10 76 76 SER SER A . n A 1 11 VAL 11 77 77 VAL VAL A . n A 1 12 ASN 12 78 78 ASN ASN A . n A 1 13 LEU 13 79 79 LEU LEU A . n A 1 14 ASP 14 80 80 ASP ASP A . n A 1 15 VAL 15 81 81 VAL VAL A . n A 1 16 LYS 16 82 82 LYS LYS A . n A 1 17 HIS 17 83 83 HIS HIS A . n A 1 18 PHE 18 84 84 PHE PHE A . n A 1 19 SER 19 85 85 SER SER A . n A 1 20 PRO 20 86 86 PRO PRO A . n A 1 21 GLU 21 87 87 GLU GLU A . n A 1 22 GLU 22 88 88 GLU GLU A . n A 1 23 LEU 23 89 89 LEU LEU A . n A 1 24 LYS 24 90 90 LYS LYS A . n A 1 25 VAL 25 91 91 VAL VAL A . n A 1 26 LYS 26 92 92 LYS LYS A . n A 1 27 VAL 27 93 93 VAL VAL A . n A 1 28 LEU 28 94 94 LEU LEU A . n A 1 29 GLY 29 95 95 GLY GLY A . n A 1 30 ASP 30 96 96 ASP ASP A . n A 1 31 VAL 31 97 97 VAL VAL A . n A 1 32 ILE 32 98 98 ILE ILE A . n A 1 33 GLU 33 99 99 GLU GLU A . n A 1 34 VAL 34 100 100 VAL VAL A . n A 1 35 HIS 35 101 101 HIS HIS A . n A 1 36 GLY 36 102 102 GLY GLY A . n A 1 37 LYS 37 103 103 LYS LYS A . n A 1 38 HIS 38 104 104 HIS HIS A . n A 1 39 GLU 39 105 105 GLU GLU A . n A 1 40 GLU 40 106 106 GLU GLU A . n A 1 41 ARG 41 107 107 ARG ARG A . n A 1 42 GLN 42 108 108 GLN GLN A . n A 1 43 ASP 43 109 109 ASP ASP A . n A 1 44 GLU 44 110 110 GLU GLU A . n A 1 45 HIS 45 111 111 HIS HIS A . n A 1 46 GLY 46 112 112 GLY GLY A . n A 1 47 PHE 47 113 113 PHE PHE A . n A 1 48 ILE 48 114 114 ILE ILE A . n A 1 49 SER 49 115 115 SER SER A . n A 1 50 ARG 50 116 116 ARG ARG A . n A 1 51 GLU 51 117 117 GLU GLU A . n A 1 52 PHE 52 118 118 PHE PHE A . n A 1 53 HIS 53 119 119 HIS HIS A . n A 1 54 ARG 54 120 120 ARG ARG A . n A 1 55 LYS 55 121 121 LYS LYS A . n A 1 56 TYR 56 122 122 TYR TYR A . n A 1 57 ARG 57 123 123 ARG ARG A . n A 1 58 ILE 58 124 124 ILE ILE A . n A 1 59 PRO 59 125 125 PRO PRO A . n A 1 60 ALA 60 126 126 ALA ALA A . n A 1 61 ASP 61 127 127 ASP ASP A . n A 1 62 VAL 62 128 128 VAL VAL A . n A 1 63 ASP 63 129 129 ASP ASP A . n A 1 64 PRO 64 130 130 PRO PRO A . n A 1 65 LEU 65 131 131 LEU LEU A . n A 1 66 THR 66 132 132 THR THR A . n A 1 67 ILE 67 133 133 ILE ILE A . n A 1 68 THR 68 134 134 THR THR A . n A 1 69 SER 69 135 135 SER SER A . n A 1 70 SER 70 136 136 SER SER A . n A 1 71 LEU 71 137 137 LEU LEU A . n A 1 72 SER 72 138 138 SER SER A . n A 1 73 SER 73 139 139 SER SER A . n A 1 74 ASP 74 140 140 ASP ASP A . n A 1 75 GLY 75 141 141 GLY GLY A . n A 1 76 VAL 76 142 142 VAL VAL A . n A 1 77 LEU 77 143 143 LEU LEU A . n A 1 78 THR 78 144 144 THR THR A . n A 1 79 VAL 79 145 145 VAL VAL A . n A 1 80 ASN 80 146 146 ASN ASN A . n A 1 81 GLY 81 147 147 GLY GLY A . n A 1 82 PRO 82 148 148 PRO PRO A . n A 1 83 ARG 83 149 149 ARG ARG A . n A 1 84 LYS 84 150 150 LYS LYS A . n A 1 85 GLN 85 151 151 GLN GLN A . n A 1 86 VAL 86 152 152 VAL VAL A . n A 1 87 SER 87 153 153 SER SER A . n B 2 1 GLY 1 155 155 GLY GLY B . n B 2 2 GLU 2 156 156 GLU GLU B . n B 2 3 ARG 3 157 157 ARG ARG B . n B 2 4 THR 4 158 158 THR THR B . n B 2 5 ILE 5 159 159 ILE ILE B . n B 2 6 PRO 6 160 160 PRO PRO B . n B 2 7 ILE 7 161 161 ILE ILE B . n B 2 8 THR 8 162 162 THR THR B . n B 2 9 ARG 9 163 163 ARG ARG B . n B 2 10 GLU 10 164 164 GLU GLU B . n # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1,2 A,B,C,D,E 2 1 A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 1160 ? 2 MORE -4 ? 2 'SSA (A^2)' 6970 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 3_555 -x,y,-z -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-04-09 2 'Structure model' 1 1 2014-05-14 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 2 PHENIX 1.8.1_1168 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 3 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 4 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 5 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 ND2 A ASN 78 ? A O A HOH 354 ? ? 2.13 2 1 NE2 A HIS 83 ? ? O1 A SIN 201 ? ? 2.13 3 1 O A HOH 352 ? ? O B HOH 211 ? ? 2.14 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NE2 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HIS _pdbx_validate_symm_contact.auth_seq_id_1 83 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O4 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 SIN _pdbx_validate_symm_contact.auth_seq_id_2 201 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 3_555 _pdbx_validate_symm_contact.dist 2.14 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 B _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 157 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 A _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 B _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 157 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 A _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 B _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 157 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 A _pdbx_validate_rmsd_angle.angle_value 123.67 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation 3.37 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLU 110 ? CG ? A GLU 44 CG 2 1 Y 1 A GLU 110 ? CD ? A GLU 44 CD 3 1 Y 1 A GLU 110 ? OE1 ? A GLU 44 OE1 4 1 Y 1 A GLU 110 ? OE2 ? A GLU 44 OE2 5 1 Y 1 B GLU 164 ? CD ? B GLU 10 CD 6 1 Y 1 B GLU 164 ? OE1 ? B GLU 10 OE1 7 1 Y 1 B GLU 164 ? OE2 ? B GLU 10 OE2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 'SUCCINIC ACID' SIN 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 SIN 1 201 1 SIN SIN A . D 4 HOH 1 301 2 HOH HOH A . D 4 HOH 2 302 4 HOH HOH A . D 4 HOH 3 303 5 HOH HOH A . D 4 HOH 4 304 6 HOH HOH A . D 4 HOH 5 305 7 HOH HOH A . D 4 HOH 6 306 8 HOH HOH A . D 4 HOH 7 307 9 HOH HOH A . D 4 HOH 8 308 12 HOH HOH A . D 4 HOH 9 309 13 HOH HOH A . D 4 HOH 10 310 14 HOH HOH A . D 4 HOH 11 311 16 HOH HOH A . D 4 HOH 12 312 17 HOH HOH A . D 4 HOH 13 313 19 HOH HOH A . D 4 HOH 14 314 21 HOH HOH A . D 4 HOH 15 315 24 HOH HOH A . D 4 HOH 16 316 25 HOH HOH A . D 4 HOH 17 317 26 HOH HOH A . D 4 HOH 18 318 27 HOH HOH A . D 4 HOH 19 319 31 HOH HOH A . D 4 HOH 20 320 34 HOH HOH A . D 4 HOH 21 321 35 HOH HOH A . D 4 HOH 22 322 36 HOH HOH A . D 4 HOH 23 323 38 HOH HOH A . D 4 HOH 24 324 39 HOH HOH A . D 4 HOH 25 325 40 HOH HOH A . D 4 HOH 26 326 41 HOH HOH A . D 4 HOH 27 327 43 HOH HOH A . D 4 HOH 28 328 46 HOH HOH A . D 4 HOH 29 329 47 HOH HOH A . D 4 HOH 30 330 50 HOH HOH A . D 4 HOH 31 331 54 HOH HOH A . D 4 HOH 32 332 58 HOH HOH A . D 4 HOH 33 333 59 HOH HOH A . D 4 HOH 34 334 62 HOH HOH A . D 4 HOH 35 335 63 HOH HOH A . D 4 HOH 36 336 64 HOH HOH A . D 4 HOH 37 337 65 HOH HOH A . D 4 HOH 38 338 66 HOH HOH A . D 4 HOH 39 339 69 HOH HOH A . D 4 HOH 40 340 70 HOH HOH A . D 4 HOH 41 341 71 HOH HOH A . D 4 HOH 42 342 73 HOH HOH A . D 4 HOH 43 343 74 HOH HOH A . D 4 HOH 44 344 78 HOH HOH A . D 4 HOH 45 345 79 HOH HOH A . D 4 HOH 46 346 81 HOH HOH A . D 4 HOH 47 347 83 HOH HOH A . D 4 HOH 48 348 84 HOH HOH A . D 4 HOH 49 349 86 HOH HOH A . D 4 HOH 50 350 89 HOH HOH A . D 4 HOH 51 351 90 HOH HOH A . D 4 HOH 52 352 92 HOH HOH A . D 4 HOH 53 353 94 HOH HOH A . D 4 HOH 54 354 96 HOH HOH A . D 4 HOH 55 355 97 HOH HOH A . D 4 HOH 56 356 98 HOH HOH A . D 4 HOH 57 357 99 HOH HOH A . D 4 HOH 58 358 100 HOH HOH A . E 4 HOH 1 201 1 HOH HOH B . E 4 HOH 2 202 3 HOH HOH B . E 4 HOH 3 203 11 HOH HOH B . E 4 HOH 4 204 18 HOH HOH B . E 4 HOH 5 205 20 HOH HOH B . E 4 HOH 6 206 22 HOH HOH B . E 4 HOH 7 207 45 HOH HOH B . E 4 HOH 8 208 48 HOH HOH B . E 4 HOH 9 209 51 HOH HOH B . E 4 HOH 10 210 87 HOH HOH B . E 4 HOH 11 211 91 HOH HOH B . E 4 HOH 12 212 95 HOH HOH B . #