data_4M88 # _entry.id 4M88 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4M88 RCSB RCSB081589 WWPDB D_1000081589 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC111314 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4M88 _pdbx_database_status.recvd_initial_deposition_date 2013-08-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, R.' 1 'Endres, M.' 2 'Joachimiak, A.' 3 'Midwest Center for Structural Genomics' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal structure of extracellular ligand-binding receptor from Verminephrobacter eiseniae ef01-2' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Wu, R.' 1 primary 'Endres, M.' 2 primary 'Joachimiak, A.' 3 primary 'Midwest Center for Structural Genomics' 4 # _cell.entry_id 4M88 _cell.length_a 36.076 _cell.length_b 95.810 _cell.length_c 50.300 _cell.angle_alpha 90.00 _cell.angle_beta 111.56 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4M88 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Extracellular ligand-binding receptor' 37798.770 1 ? ? 'SUBSTRATE BINDING PROTEIN (AMINO ACID)' ? 2 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 3 water nat water 18.015 100 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'ABC TRANSPORTER, SUBSTRATE BINDING PROTEIN (AMINO ACID)' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNAQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGEGFAEQFPKA(MSE)EKKPLALI SP(MSE)GSAAIKR(MSE)LDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQ(MSE)LG (MSE)SKLATLYQDLPTGTSG(MSE)AVVQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIV AGIAALRKADVTQPLFVLSYVSAAQIVKVVGVAGARGVGIVQAFPDPNDK(MSE)LPVQREFQAA(MSE)KEAFPQ (MSE)QEYTEFQLEGYLSARTVGEALKHPKNTGLSAANLAATLST(MSE)GEIDIGGFHLDFSKGNAGSRYVNIGVIGRD GQVYY ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAQIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGEGFAEQFPKAMEKKPLALISPMG SAAIKRMLDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQMLGMSKLATLYQDLPTGTSGMAV VQEAVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAALRKADVTQPLFVLSYVSAAQIVK VVGVAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAFPQMQEYTEFQLEGYLSARTVGEALKHPKNTGLSAANLAATLS TMGEIDIGGFHLDFSKGNAGSRYVNIGVIGRDGQVYY ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC111314 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 GLN n 1 5 ILE n 1 6 VAL n 1 7 LEU n 1 8 GLY n 1 9 GLN n 1 10 ILE n 1 11 GLY n 1 12 PRO n 1 13 PHE n 1 14 THR n 1 15 GLY n 1 16 PRO n 1 17 LEU n 1 18 ALA n 1 19 ALA n 1 20 ASP n 1 21 ALA n 1 22 ALA n 1 23 GLY n 1 24 LEU n 1 25 ASN n 1 26 GLN n 1 27 GLY n 1 28 ILE n 1 29 LYS n 1 30 ALA n 1 31 TYR n 1 32 LEU n 1 33 ALA n 1 34 GLN n 1 35 ALA n 1 36 ASN n 1 37 LYS n 1 38 ALA n 1 39 GLY n 1 40 GLY n 1 41 ILE n 1 42 ARG n 1 43 GLY n 1 44 GLN n 1 45 LYS n 1 46 LEU n 1 47 THR n 1 48 LEU n 1 49 PHE n 1 50 GLU n 1 51 ALA n 1 52 ASP n 1 53 ASP n 1 54 ARG n 1 55 PHE n 1 56 SER n 1 57 GLY n 1 58 GLU n 1 59 GLY n 1 60 PHE n 1 61 ALA n 1 62 GLU n 1 63 GLN n 1 64 PHE n 1 65 PRO n 1 66 LYS n 1 67 ALA n 1 68 MSE n 1 69 GLU n 1 70 LYS n 1 71 LYS n 1 72 PRO n 1 73 LEU n 1 74 ALA n 1 75 LEU n 1 76 ILE n 1 77 SER n 1 78 PRO n 1 79 MSE n 1 80 GLY n 1 81 SER n 1 82 ALA n 1 83 ALA n 1 84 ILE n 1 85 LYS n 1 86 ARG n 1 87 MSE n 1 88 LEU n 1 89 ASP n 1 90 ASP n 1 91 LYS n 1 92 LEU n 1 93 LEU n 1 94 ASP n 1 95 THR n 1 96 ALA n 1 97 PRO n 1 98 VAL n 1 99 VAL n 1 100 VAL n 1 101 VAL n 1 102 ASN n 1 103 GLY n 1 104 VAL n 1 105 PRO n 1 106 GLY n 1 107 ALA n 1 108 GLU n 1 109 SER n 1 110 LEU n 1 111 ARG n 1 112 THR n 1 113 PRO n 1 114 GLY n 1 115 HIS n 1 116 PRO n 1 117 LYS n 1 118 PHE n 1 119 PHE n 1 120 HIS n 1 121 VAL n 1 122 ARG n 1 123 ALA n 1 124 GLY n 1 125 ASP n 1 126 LYS n 1 127 GLN n 1 128 GLU n 1 129 ILE n 1 130 GLU n 1 131 GLU n 1 132 ILE n 1 133 VAL n 1 134 SER n 1 135 HIS n 1 136 ALA n 1 137 GLN n 1 138 MSE n 1 139 LEU n 1 140 GLY n 1 141 MSE n 1 142 SER n 1 143 LYS n 1 144 LEU n 1 145 ALA n 1 146 THR n 1 147 LEU n 1 148 TYR n 1 149 GLN n 1 150 ASP n 1 151 LEU n 1 152 PRO n 1 153 THR n 1 154 GLY n 1 155 THR n 1 156 SER n 1 157 GLY n 1 158 MSE n 1 159 ALA n 1 160 VAL n 1 161 VAL n 1 162 GLN n 1 163 GLU n 1 164 ALA n 1 165 VAL n 1 166 LYS n 1 167 THR n 1 168 VAL n 1 169 PRO n 1 170 GLY n 1 171 GLY n 1 172 LYS n 1 173 ILE n 1 174 GLU n 1 175 LEU n 1 176 ASN n 1 177 GLY n 1 178 VAL n 1 179 LYS n 1 180 SER n 1 181 GLY n 1 182 PRO n 1 183 ASP n 1 184 ALA n 1 185 ALA n 1 186 ALA n 1 187 LEU n 1 188 ALA n 1 189 ALA n 1 190 ALA n 1 191 ALA n 1 192 ARG n 1 193 GLN n 1 194 ILE n 1 195 ALA n 1 196 ALA n 1 197 LEU n 1 198 GLY n 1 199 ALA n 1 200 GLN n 1 201 GLY n 1 202 VAL n 1 203 LEU n 1 204 VAL n 1 205 ILE n 1 206 GLY n 1 207 PRO n 1 208 PRO n 1 209 PRO n 1 210 PHE n 1 211 ILE n 1 212 VAL n 1 213 ALA n 1 214 GLY n 1 215 ILE n 1 216 ALA n 1 217 ALA n 1 218 LEU n 1 219 ARG n 1 220 LYS n 1 221 ALA n 1 222 ASP n 1 223 VAL n 1 224 THR n 1 225 GLN n 1 226 PRO n 1 227 LEU n 1 228 PHE n 1 229 VAL n 1 230 LEU n 1 231 SER n 1 232 TYR n 1 233 VAL n 1 234 SER n 1 235 ALA n 1 236 ALA n 1 237 GLN n 1 238 ILE n 1 239 VAL n 1 240 LYS n 1 241 VAL n 1 242 VAL n 1 243 GLY n 1 244 VAL n 1 245 ALA n 1 246 GLY n 1 247 ALA n 1 248 ARG n 1 249 GLY n 1 250 VAL n 1 251 GLY n 1 252 ILE n 1 253 VAL n 1 254 GLN n 1 255 ALA n 1 256 PHE n 1 257 PRO n 1 258 ASP n 1 259 PRO n 1 260 ASN n 1 261 ASP n 1 262 LYS n 1 263 MSE n 1 264 LEU n 1 265 PRO n 1 266 VAL n 1 267 GLN n 1 268 ARG n 1 269 GLU n 1 270 PHE n 1 271 GLN n 1 272 ALA n 1 273 ALA n 1 274 MSE n 1 275 LYS n 1 276 GLU n 1 277 ALA n 1 278 PHE n 1 279 PRO n 1 280 GLN n 1 281 MSE n 1 282 GLN n 1 283 GLU n 1 284 TYR n 1 285 THR n 1 286 GLU n 1 287 PHE n 1 288 GLN n 1 289 LEU n 1 290 GLU n 1 291 GLY n 1 292 TYR n 1 293 LEU n 1 294 SER n 1 295 ALA n 1 296 ARG n 1 297 THR n 1 298 VAL n 1 299 GLY n 1 300 GLU n 1 301 ALA n 1 302 LEU n 1 303 LYS n 1 304 HIS n 1 305 PRO n 1 306 LYS n 1 307 ASN n 1 308 THR n 1 309 GLY n 1 310 LEU n 1 311 SER n 1 312 ALA n 1 313 ALA n 1 314 ASN n 1 315 LEU n 1 316 ALA n 1 317 ALA n 1 318 THR n 1 319 LEU n 1 320 SER n 1 321 THR n 1 322 MSE n 1 323 GLY n 1 324 GLU n 1 325 ILE n 1 326 ASP n 1 327 ILE n 1 328 GLY n 1 329 GLY n 1 330 PHE n 1 331 HIS n 1 332 LEU n 1 333 ASP n 1 334 PHE n 1 335 SER n 1 336 LYS n 1 337 GLY n 1 338 ASN n 1 339 ALA n 1 340 GLY n 1 341 SER n 1 342 ARG n 1 343 TYR n 1 344 VAL n 1 345 ASN n 1 346 ILE n 1 347 GLY n 1 348 VAL n 1 349 ILE n 1 350 GLY n 1 351 ARG n 1 352 ASP n 1 353 GLY n 1 354 GLN n 1 355 VAL n 1 356 TYR n 1 357 TYR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Veis_2660 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain EF01-2 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Verminephrobacter eiseniae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 391735 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)MAGIC' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PMCSG73 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A1WL96_VEREI _struct_ref.pdbx_db_accession A1WL96 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;QIVLGQIGPFTGPLAADAAGLNQGIKAYLAQANKAGGIRGQKLTLFEADDRFSGEGFAEQFPKAMEKKPLALISPMGSAA IKRMLDDKLLDTAPVVVVNGVPGAESLRTPGHPKFFHVRAGDKQEIEEIVSHAQMLGMSKLATLYQDLPTGTSGMAVVQE AVKTVPGGKIELNGVKSGPDAAALAAAARQIAALGAQGVLVIGPPPFIVAGIAALRKADVTQPLFVLSYVSAAQIVKVVG VAGARGVGIVQAFPDPNDKMLPVQREFQAAMKEAFPQMQEYTEFQLEGYLSARTVGEALKHPKNTGLSAANLAATLSTMG EIDIGGFHLDFSKGNAGSRYVNIGVIGRDGQVYY ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4M88 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 357 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A1WL96 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 379 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 354 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4M88 SER A 1 ? UNP A1WL96 ? ? 'EXPRESSION TAG' -2 1 1 4M88 ASN A 2 ? UNP A1WL96 ? ? 'EXPRESSION TAG' -1 2 1 4M88 ALA A 3 ? UNP A1WL96 ? ? 'EXPRESSION TAG' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4M88 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details '0.2 M Lithium Sulfate, 0.1 M Sodium Acetate:Acetic Acid pH 4.5, 30% (w/v) PEG 8000, VAPOR DIFFUSION, SITTING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-04-21 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111, channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97897 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength 0.97897 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 1.76 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 12.8 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4M88 _reflns.B_iso_Wilson_estimate 18.7 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rsym_value 0.034 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 31127 _reflns.d_resolution_low 50 _reflns.pdbx_redundancy 2.8 _reflns.number_obs 30220 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.76 _reflns_shell.d_res_low 1.79 _reflns_shell.percent_possible_all 98.4 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.643 _reflns_shell.meanI_over_sigI_obs 2.43 _reflns_shell.pdbx_redundancy 2.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1561 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.07 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details ? _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4M88 _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.17 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values MLHL _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1738 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1530 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.38 _refine.ls_percent_reflns_obs 96.18 _refine.ls_R_factor_R_work 0.1720 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.762 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 31.666 _refine.pdbx_overall_phase_error 20.51 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.2088 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 30180 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2610 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 24 _refine_hist.number_atoms_solvent 100 _refine_hist.number_atoms_total 2734 _refine_hist.d_res_high 1.762 _refine_hist.d_res_low 31.666 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 2679 ? 'X-RAY DIFFRACTION' f_angle_d 1.103 ? ? 3619 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 13.105 ? ? 986 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.070 ? ? 407 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 477 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.7620 1.8189 1968 0.2086 73.00 0.2805 . . 99 . . 2067 . 'X-RAY DIFFRACTION' . 1.8189 1.8839 2429 0.2010 90.00 0.2617 . . 140 . . 2569 . 'X-RAY DIFFRACTION' . 1.8839 1.9593 2642 0.1974 98.00 0.2637 . . 147 . . 2789 . 'X-RAY DIFFRACTION' . 1.9593 2.0485 2682 0.1777 99.00 0.2314 . . 146 . . 2828 . 'X-RAY DIFFRACTION' . 2.0485 2.1565 2672 0.1760 99.00 0.2145 . . 160 . . 2832 . 'X-RAY DIFFRACTION' . 2.1565 2.2915 2699 0.1661 99.00 0.2073 . . 136 . . 2835 . 'X-RAY DIFFRACTION' . 2.2915 2.4684 2678 0.1673 100.00 0.2243 . . 146 . . 2824 . 'X-RAY DIFFRACTION' . 2.4684 2.7167 2706 0.1727 100.00 0.2153 . . 140 . . 2846 . 'X-RAY DIFFRACTION' . 2.7167 3.1095 2726 0.1707 100.00 0.2332 . . 138 . . 2864 . 'X-RAY DIFFRACTION' . 3.1095 3.9165 2711 0.1601 100.00 0.1994 . . 147 . . 2858 . 'X-RAY DIFFRACTION' . 3.9165 31.6708 2737 0.1692 99.00 0.1612 . . 131 . . 2868 . 'X-RAY DIFFRACTION' # _struct.entry_id 4M88 _struct.title 'Crystal structure of extracellular ligand-binding receptor from Verminephrobacter eiseniae ef01-2' _struct.pdbx_descriptor 'Extracellular ligand-binding receptor' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'TRANSPORT PROTEIN' _struct_keywords.text ;STRUCTURAL GENOMICS, PSI-BIOLOGY, MIDWEST CENTER FOR STRUCTURAL GENOMI, Midwest Center for Structural Genomics, MCSG, ABA-sanwich, solute binding protein, amino acid, extracellular, TRANSPORT PROTEIN ; _struct_keywords.entry_id 4M88 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LEU A 17 ? ALA A 38 ? LEU A 14 ALA A 35 1 ? 22 HELX_P HELX_P2 2 SER A 56 ? GLU A 69 ? SER A 53 GLU A 66 1 ? 14 HELX_P HELX_P3 3 GLY A 80 ? ASP A 90 ? GLY A 77 ASP A 87 1 ? 11 HELX_P HELX_P4 4 ALA A 107 ? THR A 112 ? ALA A 104 THR A 109 1 ? 6 HELX_P HELX_P5 5 GLY A 124 ? LEU A 139 ? GLY A 121 LEU A 136 1 ? 16 HELX_P HELX_P6 6 LEU A 151 ? THR A 167 ? LEU A 148 THR A 164 1 ? 17 HELX_P HELX_P7 7 ASP A 183 ? ALA A 196 ? ASP A 180 ALA A 193 1 ? 14 HELX_P HELX_P8 8 PRO A 207 ? ALA A 221 ? PRO A 204 ALA A 218 1 ? 15 HELX_P HELX_P9 9 SER A 234 ? ARG A 248 ? SER A 231 ARG A 245 1 ? 15 HELX_P HELX_P10 10 LEU A 264 ? PHE A 278 ? LEU A 261 PHE A 275 1 ? 15 HELX_P HELX_P11 11 THR A 285 ? HIS A 304 ? THR A 282 HIS A 301 1 ? 20 HELX_P HELX_P12 12 SER A 311 ? MSE A 322 ? SER A 308 MSE A 319 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 67 C ? ? ? 1_555 A MSE 68 N ? ? A ALA 64 A MSE 65 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 68 C ? ? ? 1_555 A GLU 69 N ? ? A MSE 65 A GLU 66 1_555 ? ? ? ? ? ? ? 1.331 ? covale3 covale ? ? A PRO 78 C ? ? ? 1_555 A MSE 79 N ? ? A PRO 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.327 ? covale4 covale ? ? A MSE 79 C ? ? ? 1_555 A GLY 80 N ? ? A MSE 76 A GLY 77 1_555 ? ? ? ? ? ? ? 1.330 ? covale5 covale ? ? A ARG 86 C ? ? ? 1_555 A MSE 87 N ? ? A ARG 83 A MSE 84 1_555 ? ? ? ? ? ? ? 1.332 ? covale6 covale ? ? A MSE 87 C ? ? ? 1_555 A LEU 88 N ? ? A MSE 84 A LEU 85 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A GLN 137 C ? ? ? 1_555 A MSE 138 N ? ? A GLN 134 A MSE 135 1_555 ? ? ? ? ? ? ? 1.329 ? covale8 covale ? ? A MSE 138 C ? ? ? 1_555 A LEU 139 N ? ? A MSE 135 A LEU 136 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? A GLY 140 C ? ? ? 1_555 A MSE 141 N ? ? A GLY 137 A MSE 138 1_555 ? ? ? ? ? ? ? 1.327 ? covale10 covale ? ? A MSE 141 C ? ? ? 1_555 A SER 142 N ? ? A MSE 138 A SER 139 1_555 ? ? ? ? ? ? ? 1.331 ? covale11 covale ? ? A GLY 157 C ? ? ? 1_555 A MSE 158 N ? ? A GLY 154 A MSE 155 1_555 ? ? ? ? ? ? ? 1.329 ? covale12 covale ? ? A MSE 158 C ? ? ? 1_555 A ALA 159 N ? ? A MSE 155 A ALA 156 1_555 ? ? ? ? ? ? ? 1.328 ? covale13 covale ? ? A LYS 262 C ? ? ? 1_555 A MSE 263 N ? ? A LYS 259 A MSE 260 1_555 ? ? ? ? ? ? ? 1.327 ? covale14 covale ? ? A MSE 263 C ? ? ? 1_555 A LEU 264 N ? ? A MSE 260 A LEU 261 1_555 ? ? ? ? ? ? ? 1.329 ? covale15 covale ? ? A ALA 273 C ? ? ? 1_555 A MSE 274 N ? ? A ALA 270 A MSE 271 1_555 ? ? ? ? ? ? ? 1.331 ? covale16 covale ? ? A MSE 274 C ? ? ? 1_555 A LYS 275 N ? ? A MSE 271 A LYS 272 1_555 ? ? ? ? ? ? ? 1.339 ? covale17 covale ? ? A GLN 280 C ? ? ? 1_555 A MSE 281 N ? ? A GLN 277 A MSE 278 1_555 ? ? ? ? ? ? ? 1.327 ? covale18 covale ? ? A MSE 281 C ? ? ? 1_555 A GLN 282 N ? ? A MSE 278 A GLN 279 1_555 ? ? ? ? ? ? ? 1.328 ? covale19 covale ? ? A THR 321 C ? ? ? 1_555 A MSE 322 N ? ? A THR 318 A MSE 319 1_555 ? ? ? ? ? ? ? 1.330 ? covale20 covale ? ? A MSE 322 C ? ? ? 1_555 A GLY 323 N ? ? A MSE 319 A GLY 320 1_555 ? ? ? ? ? ? ? 1.328 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 VAL 104 A . ? VAL 101 A PRO 105 A ? PRO 102 A 1 5.22 2 THR 112 A . ? THR 109 A PRO 113 A ? PRO 110 A 1 4.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 7 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? parallel A 4 5 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 45 ? ASP A 52 ? LYS A 42 ASP A 49 A 2 GLN A 4 ? GLY A 11 ? GLN A 1 GLY A 8 A 3 ALA A 74 ? ILE A 76 ? ALA A 71 ILE A 73 A 4 VAL A 99 ? VAL A 101 ? VAL A 96 VAL A 98 A 5 PHE A 118 ? PHE A 119 ? PHE A 115 PHE A 116 B 1 GLU A 174 ? SER A 180 ? GLU A 171 SER A 177 B 2 LYS A 143 ? GLN A 149 ? LYS A 140 GLN A 146 B 3 GLY A 201 ? ILE A 205 ? GLY A 198 ILE A 202 B 4 LEU A 227 ? VAL A 229 ? LEU A 224 VAL A 226 B 5 VAL A 250 ? GLN A 254 ? VAL A 247 GLN A 251 B 6 ASN A 345 ? ILE A 349 ? ASN A 342 ILE A 346 B 7 VAL A 355 ? TYR A 356 ? VAL A 352 TYR A 353 C 1 ILE A 325 ? ILE A 327 ? ILE A 322 ILE A 324 C 2 PHE A 330 ? LEU A 332 ? PHE A 327 LEU A 329 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O THR A 47 ? O THR A 44 N ILE A 5 ? N ILE A 2 A 2 3 N GLY A 8 ? N GLY A 5 O ILE A 76 ? O ILE A 73 A 3 4 N LEU A 75 ? N LEU A 72 O VAL A 101 ? O VAL A 98 A 4 5 N VAL A 100 ? N VAL A 97 O PHE A 119 ? O PHE A 116 B 1 2 O VAL A 178 ? O VAL A 175 N THR A 146 ? N THR A 143 B 2 3 N LEU A 147 ? N LEU A 144 O LEU A 203 ? O LEU A 200 B 3 4 N VAL A 202 ? N VAL A 199 O PHE A 228 ? O PHE A 225 B 4 5 N LEU A 227 ? N LEU A 224 O GLY A 251 ? O GLY A 248 B 5 6 N GLN A 254 ? N GLN A 251 O ASN A 345 ? O ASN A 342 B 6 7 N VAL A 348 ? N VAL A 345 O TYR A 356 ? O TYR A 353 C 1 2 N ILE A 327 ? N ILE A 324 O PHE A 330 ? O PHE A 327 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL A 401' AC2 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE GOL A 402' AC3 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL A 403' AC4 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 404' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLU A 324 ? GLU A 321 . ? 1_555 ? 2 AC1 6 GLY A 340 ? GLY A 337 . ? 1_555 ? 3 AC1 6 SER A 341 ? SER A 338 . ? 1_555 ? 4 AC1 6 ARG A 342 ? ARG A 339 . ? 1_555 ? 5 AC1 6 TYR A 343 ? TYR A 340 . ? 1_555 ? 6 AC1 6 HOH F . ? HOH A 522 . ? 1_555 ? 7 AC2 10 PRO A 105 ? PRO A 102 . ? 1_555 ? 8 AC2 10 ASP A 125 ? ASP A 122 . ? 1_555 ? 9 AC2 10 THR A 153 ? THR A 150 . ? 1_555 ? 10 AC2 10 GLY A 154 ? GLY A 151 . ? 1_555 ? 11 AC2 10 ILE A 205 ? ILE A 202 . ? 1_555 ? 12 AC2 10 GLY A 206 ? GLY A 203 . ? 1_555 ? 13 AC2 10 LEU A 230 ? LEU A 227 . ? 1_555 ? 14 AC2 10 TYR A 232 ? TYR A 229 . ? 1_555 ? 15 AC2 10 HOH F . ? HOH A 506 . ? 1_555 ? 16 AC2 10 HOH F . ? HOH A 518 . ? 1_555 ? 17 AC3 8 SER A 234 ? SER A 231 . ? 1_555 ? 18 AC3 8 ALA A 235 ? ALA A 232 . ? 1_555 ? 19 AC3 8 ALA A 236 ? ALA A 233 . ? 1_555 ? 20 AC3 8 ASP A 258 ? ASP A 255 . ? 1_555 ? 21 AC3 8 ASN A 260 ? ASN A 257 . ? 1_555 ? 22 AC3 8 GLU A 283 ? GLU A 280 . ? 1_555 ? 23 AC3 8 GLU A 286 ? GLU A 283 . ? 1_555 ? 24 AC3 8 HOH F . ? HOH A 580 . ? 1_555 ? 25 AC4 5 THR A 167 ? THR A 164 . ? 1_655 ? 26 AC4 5 PRO A 182 ? PRO A 179 . ? 1_555 ? 27 AC4 5 PRO A 209 ? PRO A 206 . ? 1_555 ? 28 AC4 5 PHE A 210 ? PHE A 207 . ? 1_555 ? 29 AC4 5 HOH F . ? HOH A 593 . ? 1_555 ? # _database_PDB_matrix.entry_id 4M88 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4M88 _atom_sites.fract_transf_matrix[1][1] 0.027719 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.010954 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010437 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.021377 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 ASN 2 -1 ? ? ? A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 GLN 4 1 26 GLN GLN A . n A 1 5 ILE 5 2 27 ILE ILE A . n A 1 6 VAL 6 3 28 VAL VAL A . n A 1 7 LEU 7 4 29 LEU LEU A . n A 1 8 GLY 8 5 30 GLY GLY A . n A 1 9 GLN 9 6 31 GLN GLN A . n A 1 10 ILE 10 7 32 ILE ILE A . n A 1 11 GLY 11 8 33 GLY GLY A . n A 1 12 PRO 12 9 34 PRO PRO A . n A 1 13 PHE 13 10 35 PHE PHE A . n A 1 14 THR 14 11 36 THR THR A . n A 1 15 GLY 15 12 37 GLY GLY A . n A 1 16 PRO 16 13 38 PRO PRO A . n A 1 17 LEU 17 14 39 LEU LEU A . n A 1 18 ALA 18 15 40 ALA ALA A . n A 1 19 ALA 19 16 41 ALA ALA A . n A 1 20 ASP 20 17 42 ASP ASP A . n A 1 21 ALA 21 18 43 ALA ALA A . n A 1 22 ALA 22 19 44 ALA ALA A . n A 1 23 GLY 23 20 45 GLY GLY A . n A 1 24 LEU 24 21 46 LEU LEU A . n A 1 25 ASN 25 22 47 ASN ASN A . n A 1 26 GLN 26 23 48 GLN GLN A . n A 1 27 GLY 27 24 49 GLY GLY A . n A 1 28 ILE 28 25 50 ILE ILE A . n A 1 29 LYS 29 26 51 LYS LYS A . n A 1 30 ALA 30 27 52 ALA ALA A . n A 1 31 TYR 31 28 53 TYR TYR A . n A 1 32 LEU 32 29 54 LEU LEU A . n A 1 33 ALA 33 30 55 ALA ALA A . n A 1 34 GLN 34 31 56 GLN GLN A . n A 1 35 ALA 35 32 57 ALA ALA A . n A 1 36 ASN 36 33 58 ASN ASN A . n A 1 37 LYS 37 34 59 LYS LYS A . n A 1 38 ALA 38 35 60 ALA ALA A . n A 1 39 GLY 39 36 61 GLY GLY A . n A 1 40 GLY 40 37 62 GLY GLY A . n A 1 41 ILE 41 38 63 ILE ILE A . n A 1 42 ARG 42 39 64 ARG ARG A . n A 1 43 GLY 43 40 65 GLY GLY A . n A 1 44 GLN 44 41 66 GLN GLN A . n A 1 45 LYS 45 42 67 LYS LYS A . n A 1 46 LEU 46 43 68 LEU LEU A . n A 1 47 THR 47 44 69 THR THR A . n A 1 48 LEU 48 45 70 LEU LEU A . n A 1 49 PHE 49 46 71 PHE PHE A . n A 1 50 GLU 50 47 72 GLU GLU A . n A 1 51 ALA 51 48 73 ALA ALA A . n A 1 52 ASP 52 49 74 ASP ASP A . n A 1 53 ASP 53 50 75 ASP ASP A . n A 1 54 ARG 54 51 76 ARG ARG A . n A 1 55 PHE 55 52 77 PHE PHE A . n A 1 56 SER 56 53 78 SER SER A . n A 1 57 GLY 57 54 79 GLY GLY A . n A 1 58 GLU 58 55 80 GLU GLU A . n A 1 59 GLY 59 56 81 GLY GLY A . n A 1 60 PHE 60 57 82 PHE PHE A . n A 1 61 ALA 61 58 83 ALA ALA A . n A 1 62 GLU 62 59 84 GLU GLU A . n A 1 63 GLN 63 60 85 GLN GLN A . n A 1 64 PHE 64 61 86 PHE PHE A . n A 1 65 PRO 65 62 87 PRO PRO A . n A 1 66 LYS 66 63 88 LYS LYS A . n A 1 67 ALA 67 64 89 ALA ALA A . n A 1 68 MSE 68 65 90 MSE MSE A . n A 1 69 GLU 69 66 91 GLU GLU A . n A 1 70 LYS 70 67 92 LYS LYS A . n A 1 71 LYS 71 68 93 LYS LYS A . n A 1 72 PRO 72 69 94 PRO PRO A . n A 1 73 LEU 73 70 95 LEU LEU A . n A 1 74 ALA 74 71 96 ALA ALA A . n A 1 75 LEU 75 72 97 LEU LEU A . n A 1 76 ILE 76 73 98 ILE ILE A . n A 1 77 SER 77 74 99 SER SER A . n A 1 78 PRO 78 75 100 PRO PRO A . n A 1 79 MSE 79 76 101 MSE MSE A . n A 1 80 GLY 80 77 102 GLY GLY A . n A 1 81 SER 81 78 103 SER SER A . n A 1 82 ALA 82 79 104 ALA ALA A . n A 1 83 ALA 83 80 105 ALA ALA A . n A 1 84 ILE 84 81 106 ILE ILE A . n A 1 85 LYS 85 82 107 LYS LYS A . n A 1 86 ARG 86 83 108 ARG ARG A . n A 1 87 MSE 87 84 109 MSE MSE A . n A 1 88 LEU 88 85 110 LEU LEU A . n A 1 89 ASP 89 86 111 ASP ASP A . n A 1 90 ASP 90 87 112 ASP ASP A . n A 1 91 LYS 91 88 113 LYS LYS A . n A 1 92 LEU 92 89 114 LEU LEU A . n A 1 93 LEU 93 90 115 LEU LEU A . n A 1 94 ASP 94 91 116 ASP ASP A . n A 1 95 THR 95 92 117 THR THR A . n A 1 96 ALA 96 93 118 ALA ALA A . n A 1 97 PRO 97 94 119 PRO PRO A . n A 1 98 VAL 98 95 120 VAL VAL A . n A 1 99 VAL 99 96 121 VAL VAL A . n A 1 100 VAL 100 97 122 VAL VAL A . n A 1 101 VAL 101 98 123 VAL VAL A . n A 1 102 ASN 102 99 124 ASN ASN A . n A 1 103 GLY 103 100 125 GLY GLY A . n A 1 104 VAL 104 101 126 VAL VAL A . n A 1 105 PRO 105 102 127 PRO PRO A . n A 1 106 GLY 106 103 128 GLY GLY A . n A 1 107 ALA 107 104 129 ALA ALA A . n A 1 108 GLU 108 105 130 GLU GLU A . n A 1 109 SER 109 106 131 SER SER A . n A 1 110 LEU 110 107 132 LEU LEU A . n A 1 111 ARG 111 108 133 ARG ARG A . n A 1 112 THR 112 109 134 THR THR A . n A 1 113 PRO 113 110 136 PRO PRO A . n A 1 114 GLY 114 111 136 GLY GLY A . n A 1 115 HIS 115 112 137 HIS HIS A . n A 1 116 PRO 116 113 138 PRO PRO A . n A 1 117 LYS 117 114 139 LYS LYS A . n A 1 118 PHE 118 115 140 PHE PHE A . n A 1 119 PHE 119 116 141 PHE PHE A . n A 1 120 HIS 120 117 142 HIS HIS A . n A 1 121 VAL 121 118 143 VAL VAL A . n A 1 122 ARG 122 119 144 ARG ARG A . n A 1 123 ALA 123 120 145 ALA ALA A . n A 1 124 GLY 124 121 146 GLY GLY A . n A 1 125 ASP 125 122 147 ASP ASP A . n A 1 126 LYS 126 123 148 LYS LYS A . n A 1 127 GLN 127 124 149 GLN GLN A . n A 1 128 GLU 128 125 150 GLU GLU A . n A 1 129 ILE 129 126 151 ILE ILE A . n A 1 130 GLU 130 127 152 GLU GLU A . n A 1 131 GLU 131 128 153 GLU GLU A . n A 1 132 ILE 132 129 154 ILE ILE A . n A 1 133 VAL 133 130 155 VAL VAL A . n A 1 134 SER 134 131 156 SER SER A . n A 1 135 HIS 135 132 157 HIS HIS A . n A 1 136 ALA 136 133 158 ALA ALA A . n A 1 137 GLN 137 134 159 GLN GLN A . n A 1 138 MSE 138 135 160 MSE MSE A . n A 1 139 LEU 139 136 161 LEU LEU A . n A 1 140 GLY 140 137 162 GLY GLY A . n A 1 141 MSE 141 138 163 MSE MSE A . n A 1 142 SER 142 139 164 SER SER A . n A 1 143 LYS 143 140 165 LYS LYS A . n A 1 144 LEU 144 141 166 LEU LEU A . n A 1 145 ALA 145 142 167 ALA ALA A . n A 1 146 THR 146 143 168 THR THR A . n A 1 147 LEU 147 144 169 LEU LEU A . n A 1 148 TYR 148 145 170 TYR TYR A . n A 1 149 GLN 149 146 171 GLN GLN A . n A 1 150 ASP 150 147 172 ASP ASP A . n A 1 151 LEU 151 148 173 LEU LEU A . n A 1 152 PRO 152 149 174 PRO PRO A . n A 1 153 THR 153 150 175 THR THR A . n A 1 154 GLY 154 151 176 GLY GLY A . n A 1 155 THR 155 152 177 THR THR A . n A 1 156 SER 156 153 178 SER SER A . n A 1 157 GLY 157 154 179 GLY GLY A . n A 1 158 MSE 158 155 180 MSE MSE A . n A 1 159 ALA 159 156 181 ALA ALA A . n A 1 160 VAL 160 157 182 VAL VAL A . n A 1 161 VAL 161 158 183 VAL VAL A . n A 1 162 GLN 162 159 184 GLN GLN A . n A 1 163 GLU 163 160 185 GLU GLU A . n A 1 164 ALA 164 161 186 ALA ALA A . n A 1 165 VAL 165 162 187 VAL VAL A . n A 1 166 LYS 166 163 188 LYS LYS A . n A 1 167 THR 167 164 189 THR THR A . n A 1 168 VAL 168 165 190 VAL VAL A . n A 1 169 PRO 169 166 191 PRO PRO A . n A 1 170 GLY 170 167 192 GLY GLY A . n A 1 171 GLY 171 168 193 GLY GLY A . n A 1 172 LYS 172 169 194 LYS LYS A . n A 1 173 ILE 173 170 195 ILE ILE A . n A 1 174 GLU 174 171 196 GLU GLU A . n A 1 175 LEU 175 172 197 LEU LEU A . n A 1 176 ASN 176 173 198 ASN ASN A . n A 1 177 GLY 177 174 199 GLY GLY A . n A 1 178 VAL 178 175 200 VAL VAL A . n A 1 179 LYS 179 176 201 LYS LYS A . n A 1 180 SER 180 177 202 SER SER A . n A 1 181 GLY 181 178 203 GLY GLY A . n A 1 182 PRO 182 179 204 PRO PRO A . n A 1 183 ASP 183 180 205 ASP ASP A . n A 1 184 ALA 184 181 206 ALA ALA A . n A 1 185 ALA 185 182 207 ALA ALA A . n A 1 186 ALA 186 183 208 ALA ALA A . n A 1 187 LEU 187 184 209 LEU LEU A . n A 1 188 ALA 188 185 210 ALA ALA A . n A 1 189 ALA 189 186 211 ALA ALA A . n A 1 190 ALA 190 187 212 ALA ALA A . n A 1 191 ALA 191 188 213 ALA ALA A . n A 1 192 ARG 192 189 214 ARG ARG A . n A 1 193 GLN 193 190 215 GLN GLN A . n A 1 194 ILE 194 191 216 ILE ILE A . n A 1 195 ALA 195 192 217 ALA ALA A . n A 1 196 ALA 196 193 218 ALA ALA A . n A 1 197 LEU 197 194 219 LEU LEU A . n A 1 198 GLY 198 195 220 GLY GLY A . n A 1 199 ALA 199 196 221 ALA ALA A . n A 1 200 GLN 200 197 222 GLN GLN A . n A 1 201 GLY 201 198 223 GLY GLY A . n A 1 202 VAL 202 199 224 VAL VAL A . n A 1 203 LEU 203 200 225 LEU LEU A . n A 1 204 VAL 204 201 226 VAL VAL A . n A 1 205 ILE 205 202 227 ILE ILE A . n A 1 206 GLY 206 203 228 GLY GLY A . n A 1 207 PRO 207 204 229 PRO PRO A . n A 1 208 PRO 208 205 230 PRO PRO A . n A 1 209 PRO 209 206 231 PRO PRO A . n A 1 210 PHE 210 207 232 PHE PHE A . n A 1 211 ILE 211 208 233 ILE ILE A . n A 1 212 VAL 212 209 234 VAL VAL A . n A 1 213 ALA 213 210 235 ALA ALA A . n A 1 214 GLY 214 211 236 GLY GLY A . n A 1 215 ILE 215 212 237 ILE ILE A . n A 1 216 ALA 216 213 238 ALA ALA A . n A 1 217 ALA 217 214 239 ALA ALA A . n A 1 218 LEU 218 215 240 LEU LEU A . n A 1 219 ARG 219 216 241 ARG ARG A . n A 1 220 LYS 220 217 242 LYS LYS A . n A 1 221 ALA 221 218 243 ALA ALA A . n A 1 222 ASP 222 219 244 ASP ASP A . n A 1 223 VAL 223 220 245 VAL VAL A . n A 1 224 THR 224 221 246 THR THR A . n A 1 225 GLN 225 222 247 GLN GLN A . n A 1 226 PRO 226 223 248 PRO PRO A . n A 1 227 LEU 227 224 249 LEU LEU A . n A 1 228 PHE 228 225 250 PHE PHE A . n A 1 229 VAL 229 226 251 VAL VAL A . n A 1 230 LEU 230 227 252 LEU LEU A . n A 1 231 SER 231 228 253 SER SER A . n A 1 232 TYR 232 229 254 TYR TYR A . n A 1 233 VAL 233 230 255 VAL VAL A . n A 1 234 SER 234 231 256 SER SER A . n A 1 235 ALA 235 232 257 ALA ALA A . n A 1 236 ALA 236 233 258 ALA ALA A . n A 1 237 GLN 237 234 259 GLN GLN A . n A 1 238 ILE 238 235 260 ILE ILE A . n A 1 239 VAL 239 236 261 VAL VAL A . n A 1 240 LYS 240 237 262 LYS LYS A . n A 1 241 VAL 241 238 263 VAL VAL A . n A 1 242 VAL 242 239 264 VAL VAL A . n A 1 243 GLY 243 240 265 GLY GLY A . n A 1 244 VAL 244 241 266 VAL VAL A . n A 1 245 ALA 245 242 267 ALA ALA A . n A 1 246 GLY 246 243 268 GLY GLY A . n A 1 247 ALA 247 244 269 ALA ALA A . n A 1 248 ARG 248 245 270 ARG ARG A . n A 1 249 GLY 249 246 271 GLY GLY A . n A 1 250 VAL 250 247 272 VAL VAL A . n A 1 251 GLY 251 248 273 GLY GLY A . n A 1 252 ILE 252 249 274 ILE ILE A . n A 1 253 VAL 253 250 275 VAL VAL A . n A 1 254 GLN 254 251 276 GLN GLN A . n A 1 255 ALA 255 252 277 ALA ALA A . n A 1 256 PHE 256 253 278 PHE PHE A . n A 1 257 PRO 257 254 279 PRO PRO A . n A 1 258 ASP 258 255 280 ASP ASP A . n A 1 259 PRO 259 256 281 PRO PRO A . n A 1 260 ASN 260 257 282 ASN ASN A . n A 1 261 ASP 261 258 283 ASP ASP A . n A 1 262 LYS 262 259 284 LYS LYS A . n A 1 263 MSE 263 260 285 MSE MSE A . n A 1 264 LEU 264 261 286 LEU LEU A . n A 1 265 PRO 265 262 287 PRO PRO A . n A 1 266 VAL 266 263 288 VAL VAL A . n A 1 267 GLN 267 264 289 GLN GLN A . n A 1 268 ARG 268 265 290 ARG ARG A . n A 1 269 GLU 269 266 291 GLU GLU A . n A 1 270 PHE 270 267 292 PHE PHE A . n A 1 271 GLN 271 268 293 GLN GLN A . n A 1 272 ALA 272 269 294 ALA ALA A . n A 1 273 ALA 273 270 295 ALA ALA A . n A 1 274 MSE 274 271 296 MSE MSE A . n A 1 275 LYS 275 272 297 LYS LYS A . n A 1 276 GLU 276 273 298 GLU GLU A . n A 1 277 ALA 277 274 299 ALA ALA A . n A 1 278 PHE 278 275 300 PHE PHE A . n A 1 279 PRO 279 276 301 PRO PRO A . n A 1 280 GLN 280 277 302 GLN GLN A . n A 1 281 MSE 281 278 303 MSE MSE A . n A 1 282 GLN 282 279 304 GLN GLN A . n A 1 283 GLU 283 280 305 GLU GLU A . n A 1 284 TYR 284 281 306 TYR TYR A . n A 1 285 THR 285 282 307 THR THR A . n A 1 286 GLU 286 283 308 GLU GLU A . n A 1 287 PHE 287 284 309 PHE PHE A . n A 1 288 GLN 288 285 310 GLN GLN A . n A 1 289 LEU 289 286 311 LEU LEU A . n A 1 290 GLU 290 287 312 GLU GLU A . n A 1 291 GLY 291 288 313 GLY GLY A . n A 1 292 TYR 292 289 314 TYR TYR A . n A 1 293 LEU 293 290 315 LEU LEU A . n A 1 294 SER 294 291 316 SER SER A . n A 1 295 ALA 295 292 317 ALA ALA A . n A 1 296 ARG 296 293 318 ARG ARG A . n A 1 297 THR 297 294 319 THR THR A . n A 1 298 VAL 298 295 320 VAL VAL A . n A 1 299 GLY 299 296 321 GLY GLY A . n A 1 300 GLU 300 297 322 GLU GLU A . n A 1 301 ALA 301 298 323 ALA ALA A . n A 1 302 LEU 302 299 324 LEU LEU A . n A 1 303 LYS 303 300 325 LYS LYS A . n A 1 304 HIS 304 301 326 HIS HIS A . n A 1 305 PRO 305 302 327 PRO PRO A . n A 1 306 LYS 306 303 328 LYS LYS A . n A 1 307 ASN 307 304 329 ASN ASN A . n A 1 308 THR 308 305 330 THR THR A . n A 1 309 GLY 309 306 331 GLY GLY A . n A 1 310 LEU 310 307 332 LEU LEU A . n A 1 311 SER 311 308 333 SER SER A . n A 1 312 ALA 312 309 334 ALA ALA A . n A 1 313 ALA 313 310 335 ALA ALA A . n A 1 314 ASN 314 311 336 ASN ASN A . n A 1 315 LEU 315 312 337 LEU LEU A . n A 1 316 ALA 316 313 338 ALA ALA A . n A 1 317 ALA 317 314 339 ALA ALA A . n A 1 318 THR 318 315 340 THR THR A . n A 1 319 LEU 319 316 341 LEU LEU A . n A 1 320 SER 320 317 342 SER SER A . n A 1 321 THR 321 318 343 THR THR A . n A 1 322 MSE 322 319 344 MSE MSE A . n A 1 323 GLY 323 320 345 GLY GLY A . n A 1 324 GLU 324 321 346 GLU GLU A . n A 1 325 ILE 325 322 347 ILE ILE A . n A 1 326 ASP 326 323 348 ASP ASP A . n A 1 327 ILE 327 324 349 ILE ILE A . n A 1 328 GLY 328 325 350 GLY GLY A . n A 1 329 GLY 329 326 351 GLY GLY A . n A 1 330 PHE 330 327 352 PHE PHE A . n A 1 331 HIS 331 328 353 HIS HIS A . n A 1 332 LEU 332 329 354 LEU LEU A . n A 1 333 ASP 333 330 355 ASP ASP A . n A 1 334 PHE 334 331 356 PHE PHE A . n A 1 335 SER 335 332 357 SER SER A . n A 1 336 LYS 336 333 358 LYS LYS A . n A 1 337 GLY 337 334 359 GLY GLY A . n A 1 338 ASN 338 335 360 ASN ASN A . n A 1 339 ALA 339 336 361 ALA ALA A . n A 1 340 GLY 340 337 362 GLY GLY A . n A 1 341 SER 341 338 363 SER SER A . n A 1 342 ARG 342 339 364 ARG ARG A . n A 1 343 TYR 343 340 365 TYR TYR A . n A 1 344 VAL 344 341 366 VAL VAL A . n A 1 345 ASN 345 342 367 ASN ASN A . n A 1 346 ILE 346 343 368 ILE ILE A . n A 1 347 GLY 347 344 369 GLY GLY A . n A 1 348 VAL 348 345 370 VAL VAL A . n A 1 349 ILE 349 346 371 ILE ILE A . n A 1 350 GLY 350 347 372 GLY GLY A . n A 1 351 ARG 351 348 373 ARG ARG A . n A 1 352 ASP 352 349 374 ASP ASP A . n A 1 353 GLY 353 350 375 GLY GLY A . n A 1 354 GLN 354 351 376 GLN GLN A . n A 1 355 VAL 355 352 377 VAL VAL A . n A 1 356 TYR 356 353 378 TYR TYR A . n A 1 357 TYR 357 354 379 TYR TYR A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 401 1 GOL GOL A . C 2 GOL 1 402 2 GOL GOL A . D 2 GOL 1 403 3 GOL GOL A . E 2 GOL 1 404 4 GOL GOL A . F 3 HOH 1 501 2 HOH HOH A . F 3 HOH 2 502 4 HOH HOH A . F 3 HOH 3 503 5 HOH HOH A . F 3 HOH 4 504 6 HOH HOH A . F 3 HOH 5 505 7 HOH HOH A . F 3 HOH 6 506 8 HOH HOH A . F 3 HOH 7 507 9 HOH HOH A . F 3 HOH 8 508 10 HOH HOH A . F 3 HOH 9 509 11 HOH HOH A . F 3 HOH 10 510 12 HOH HOH A . F 3 HOH 11 511 13 HOH HOH A . F 3 HOH 12 512 14 HOH HOH A . F 3 HOH 13 513 15 HOH HOH A . F 3 HOH 14 514 16 HOH HOH A . F 3 HOH 15 515 17 HOH HOH A . F 3 HOH 16 516 18 HOH HOH A . F 3 HOH 17 517 19 HOH HOH A . F 3 HOH 18 518 20 HOH HOH A . F 3 HOH 19 519 21 HOH HOH A . F 3 HOH 20 520 22 HOH HOH A . F 3 HOH 21 521 23 HOH HOH A . F 3 HOH 22 522 24 HOH HOH A . F 3 HOH 23 523 25 HOH HOH A . F 3 HOH 24 524 26 HOH HOH A . F 3 HOH 25 525 27 HOH HOH A . F 3 HOH 26 526 28 HOH HOH A . F 3 HOH 27 527 29 HOH HOH A . F 3 HOH 28 528 30 HOH HOH A . F 3 HOH 29 529 31 HOH HOH A . F 3 HOH 30 530 32 HOH HOH A . F 3 HOH 31 531 33 HOH HOH A . F 3 HOH 32 532 34 HOH HOH A . F 3 HOH 33 533 35 HOH HOH A . F 3 HOH 34 534 36 HOH HOH A . F 3 HOH 35 535 37 HOH HOH A . F 3 HOH 36 536 38 HOH HOH A . F 3 HOH 37 537 39 HOH HOH A . F 3 HOH 38 538 40 HOH HOH A . F 3 HOH 39 539 41 HOH HOH A . F 3 HOH 40 540 42 HOH HOH A . F 3 HOH 41 541 43 HOH HOH A . F 3 HOH 42 542 45 HOH HOH A . F 3 HOH 43 543 46 HOH HOH A . F 3 HOH 44 544 47 HOH HOH A . F 3 HOH 45 545 48 HOH HOH A . F 3 HOH 46 546 49 HOH HOH A . F 3 HOH 47 547 50 HOH HOH A . F 3 HOH 48 548 51 HOH HOH A . F 3 HOH 49 549 52 HOH HOH A . F 3 HOH 50 550 53 HOH HOH A . F 3 HOH 51 551 54 HOH HOH A . F 3 HOH 52 552 55 HOH HOH A . F 3 HOH 53 553 56 HOH HOH A . F 3 HOH 54 554 57 HOH HOH A . F 3 HOH 55 555 58 HOH HOH A . F 3 HOH 56 556 59 HOH HOH A . F 3 HOH 57 557 60 HOH HOH A . F 3 HOH 58 558 61 HOH HOH A . F 3 HOH 59 559 62 HOH HOH A . F 3 HOH 60 560 63 HOH HOH A . F 3 HOH 61 561 64 HOH HOH A . F 3 HOH 62 562 65 HOH HOH A . F 3 HOH 63 563 66 HOH HOH A . F 3 HOH 64 564 67 HOH HOH A . F 3 HOH 65 565 68 HOH HOH A . F 3 HOH 66 566 69 HOH HOH A . F 3 HOH 67 567 70 HOH HOH A . F 3 HOH 68 568 71 HOH HOH A . F 3 HOH 69 569 72 HOH HOH A . F 3 HOH 70 570 73 HOH HOH A . F 3 HOH 71 571 74 HOH HOH A . F 3 HOH 72 572 75 HOH HOH A . F 3 HOH 73 573 76 HOH HOH A . F 3 HOH 74 574 77 HOH HOH A . F 3 HOH 75 575 78 HOH HOH A . F 3 HOH 76 576 79 HOH HOH A . F 3 HOH 77 577 80 HOH HOH A . F 3 HOH 78 578 81 HOH HOH A . F 3 HOH 79 579 82 HOH HOH A . F 3 HOH 80 580 83 HOH HOH A . F 3 HOH 81 581 84 HOH HOH A . F 3 HOH 82 582 86 HOH HOH A . F 3 HOH 83 583 87 HOH HOH A . F 3 HOH 84 584 88 HOH HOH A . F 3 HOH 85 585 89 HOH HOH A . F 3 HOH 86 586 90 HOH HOH A . F 3 HOH 87 587 91 HOH HOH A . F 3 HOH 88 588 92 HOH HOH A . F 3 HOH 89 589 93 HOH HOH A . F 3 HOH 90 590 94 HOH HOH A . F 3 HOH 91 591 95 HOH HOH A . F 3 HOH 92 592 96 HOH HOH A . F 3 HOH 93 593 98 HOH HOH A . F 3 HOH 94 594 99 HOH HOH A . F 3 HOH 95 595 100 HOH HOH A . F 3 HOH 96 596 101 HOH HOH A . F 3 HOH 97 597 102 HOH HOH A . F 3 HOH 98 598 103 HOH HOH A . F 3 HOH 99 599 104 HOH HOH A . F 3 HOH 100 600 105 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 65 ? MET SELENOMETHIONINE 2 A MSE 79 A MSE 76 ? MET SELENOMETHIONINE 3 A MSE 87 A MSE 84 ? MET SELENOMETHIONINE 4 A MSE 138 A MSE 135 ? MET SELENOMETHIONINE 5 A MSE 141 A MSE 138 ? MET SELENOMETHIONINE 6 A MSE 158 A MSE 155 ? MET SELENOMETHIONINE 7 A MSE 263 A MSE 260 ? MET SELENOMETHIONINE 8 A MSE 274 A MSE 271 ? MET SELENOMETHIONINE 9 A MSE 281 A MSE 278 ? MET SELENOMETHIONINE 10 A MSE 322 A MSE 319 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 1 1 2013-12-04 3 'Structure model' 1 2 2013-12-18 4 'Structure model' 1 3 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 3 'Structure model' 'Structure summary' 3 4 'Structure model' 'Database references' # _pdbx_audit_revision_category.ordinal 1 _pdbx_audit_revision_category.revision_ordinal 4 _pdbx_audit_revision_category.data_content_type 'Structure model' _pdbx_audit_revision_category.category citation_author # _pdbx_audit_revision_item.ordinal 1 _pdbx_audit_revision_item.revision_ordinal 4 _pdbx_audit_revision_item.data_content_type 'Structure model' _pdbx_audit_revision_item.item '_citation_author.name' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 18.0685 12.3089 12.5701 0.0813 0.0923 0.1117 0.0002 0.0207 -0.0094 1.7242 3.8021 2.4186 0.5585 0.3215 0.8552 -0.0565 -0.0569 -0.0243 -0.2563 0.0644 -0.0201 -0.0942 0.2022 -0.0066 'X-RAY DIFFRACTION' 2 ? refined 6.3794 26.7626 17.8855 0.1208 0.1485 0.1531 0.0016 -0.0064 0.0103 0.4827 0.8402 2.4988 -0.3341 -0.4556 1.0929 0.0066 -0.0127 0.0598 -0.0631 -0.0076 -0.0075 -0.1210 0.0144 -0.0077 'X-RAY DIFFRACTION' 3 ? refined 9.1233 32.4959 37.0629 0.1093 0.0746 0.1047 -0.0043 0.0091 -0.0017 2.9456 2.0538 2.0204 -0.4493 0.4119 -0.3526 -0.0903 0.0772 0.1315 0.0750 0.0337 -0.0264 -0.0312 -0.0115 0.0565 'X-RAY DIFFRACTION' 4 ? refined 13.3886 9.7046 31.0032 0.1485 0.1418 0.1584 0.0123 -0.0207 0.0211 0.4060 2.1076 2.7654 -0.1051 0.2051 1.5052 0.0116 -0.0624 -0.1289 0.2071 0.0909 -0.1221 0.2383 0.1561 -0.0956 'X-RAY DIFFRACTION' 5 ? refined 5.1375 8.8661 10.1140 0.1130 0.0890 0.1505 -0.0038 -0.0130 0.0047 2.2026 0.7565 3.4459 -0.0984 1.7745 -0.4602 0.0974 -0.0461 -0.1270 -0.1075 0.0018 0.1219 0.0627 -0.2323 -0.1166 'X-RAY DIFFRACTION' 6 ? refined 0.7525 12.6782 25.7391 0.0949 0.1512 0.1530 -0.0215 -0.0064 0.0246 1.0528 0.4469 4.9422 0.0014 1.4170 0.4196 0.1727 -0.0320 -0.1371 0.0135 0.0727 0.0219 0.2227 -0.4446 -0.2235 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 26 through 78 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 79 through 188 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 189 through 256 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 257 through 307 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 308 through 343 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 344 through 379 ) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-3000 'data collection' . ? 1 MLPHARE phasing . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 99 ? ? 75.58 155.59 2 1 LEU A 307 ? ? -118.50 52.30 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A ASN -1 ? A ASN 2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 water HOH #