data_4M8B # _entry.id 4M8B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4M8B pdb_00004m8b 10.2210/pdb4m8b/pdb NDB NA2687 ? ? RCSB RCSB081592 ? ? WWPDB D_1000081592 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-25 2 'Structure model' 1 1 2014-07-02 3 'Structure model' 1 2 2014-07-23 4 'Structure model' 1 3 2014-08-20 5 'Structure model' 1 4 2024-02-28 6 'Structure model' 1 5 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Data collection' 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Derived calculations' 7 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif 5 5 'Structure model' struct_site 6 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' 4 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4M8B _pdbx_database_status.recvd_initial_deposition_date 2013-08-13 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Rosenberg, O.S.' 1 'Lohse, M.L.' 2 'Stroud, R.M.' 3 'Johnson, A.D.' 4 # _citation.id primary _citation.title 'Structure of a new DNA-binding domain which regulates pathogenesis in a wide variety of fungi.' _citation.journal_abbrev Proc.Natl.Acad.Sci.USA _citation.journal_volume 111 _citation.page_first 10404 _citation.page_last 10410 _citation.year 2014 _citation.journal_id_ASTM PNASA6 _citation.country US _citation.journal_id_ISSN 0027-8424 _citation.journal_id_CSD 0040 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24994900 _citation.pdbx_database_id_DOI 10.1073/pnas.1410110111 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lohse, M.B.' 1 ? primary 'Rosenberg, O.S.' 2 ? primary 'Cox, J.S.' 3 ? primary 'Stroud, R.M.' 4 ? primary 'Finer-Moore, J.S.' 5 ? primary 'Johnson, A.D.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Chain A of dsDNA containing the cis-regulatory element' 6196.987 1 ? ? 'UNP residues 6-201' ? 2 polymer syn 'Chain B of dsDNA containing the cis-regulatory element' 6072.946 1 ? ? ? ? 3 polymer man YHR177W 23404.328 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 water nat water 18.015 92 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DC)(DG)(DT)(DT)(DA)(DG)(DT)(DG)(DT)(DT)(DT)(DA)(DC)(DG)(DC)(DG)(DG)' GCGCGTTAGTGTTTACGCGG A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DC)(DG)(DT)(DA)(DA)(DA)(DC)(DA)(DC)(DT)(DA)(DA)(DC)(DG)(DC)(DG)(DC)(DC)' CGCGTAAACACTAACGCGCC B ? 3 'polypeptide(L)' no no ;GPSSPGPTCYGYIDDEQDLALVFQGVFNGNLRCIERRPYDAEKVELVNPGNIFVFNEEKSGIKRWTDGFSWSPSRISGKF LVYREYNRLGSTHDLPLHNVPEYNIFERAHRKYFYTGLLKKTFSLKFNMDPTDSTKLETFHLIAYYTEKDIHQGSLRRPS ENPFFHKFRPSQKLLDALQKVAVGNGRSNPSKNNERGRTKAH ; ;GPSSPGPTCYGYIDDEQDLALVFQGVFNGNLRCIERRPYDAEKVELVNPGNIFVFNEEKSGIKRWTDGFSWSPSRISGKF LVYREYNRLGSTHDLPLHNVPEYNIFERAHRKYFYTGLLKKTFSLKFNMDPTDSTKLETFHLIAYYTEKDIHQGSLRRPS ENPFFHKFRPSQKLLDALQKVAVGNGRSNPSKNNERGRTKAH ; R ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 DG n 1 2 DC n 1 3 DG n 1 4 DC n 1 5 DG n 1 6 DT n 1 7 DT n 1 8 DA n 1 9 DG n 1 10 DT n 1 11 DG n 1 12 DT n 1 13 DT n 1 14 DT n 1 15 DA n 1 16 DC n 1 17 DG n 1 18 DC n 1 19 DG n 1 20 DG n 2 1 DC n 2 2 DG n 2 3 DC n 2 4 DG n 2 5 DT n 2 6 DA n 2 7 DA n 2 8 DA n 2 9 DC n 2 10 DA n 2 11 DC n 2 12 DT n 2 13 DA n 2 14 DA n 2 15 DC n 2 16 DG n 2 17 DC n 2 18 DG n 2 19 DC n 2 20 DC n 3 1 GLY n 3 2 PRO n 3 3 SER n 3 4 SER n 3 5 PRO n 3 6 GLY n 3 7 PRO n 3 8 THR n 3 9 CYS n 3 10 TYR n 3 11 GLY n 3 12 TYR n 3 13 ILE n 3 14 ASP n 3 15 ASP n 3 16 GLU n 3 17 GLN n 3 18 ASP n 3 19 LEU n 3 20 ALA n 3 21 LEU n 3 22 VAL n 3 23 PHE n 3 24 GLN n 3 25 GLY n 3 26 VAL n 3 27 PHE n 3 28 ASN n 3 29 GLY n 3 30 ASN n 3 31 LEU n 3 32 ARG n 3 33 CYS n 3 34 ILE n 3 35 GLU n 3 36 ARG n 3 37 ARG n 3 38 PRO n 3 39 TYR n 3 40 ASP n 3 41 ALA n 3 42 GLU n 3 43 LYS n 3 44 VAL n 3 45 GLU n 3 46 LEU n 3 47 VAL n 3 48 ASN n 3 49 PRO n 3 50 GLY n 3 51 ASN n 3 52 ILE n 3 53 PHE n 3 54 VAL n 3 55 PHE n 3 56 ASN n 3 57 GLU n 3 58 GLU n 3 59 LYS n 3 60 SER n 3 61 GLY n 3 62 ILE n 3 63 LYS n 3 64 ARG n 3 65 TRP n 3 66 THR n 3 67 ASP n 3 68 GLY n 3 69 PHE n 3 70 SER n 3 71 TRP n 3 72 SER n 3 73 PRO n 3 74 SER n 3 75 ARG n 3 76 ILE n 3 77 SER n 3 78 GLY n 3 79 LYS n 3 80 PHE n 3 81 LEU n 3 82 VAL n 3 83 TYR n 3 84 ARG n 3 85 GLU n 3 86 TYR n 3 87 ASN n 3 88 ARG n 3 89 LEU n 3 90 GLY n 3 91 SER n 3 92 THR n 3 93 HIS n 3 94 ASP n 3 95 LEU n 3 96 PRO n 3 97 LEU n 3 98 HIS n 3 99 ASN n 3 100 VAL n 3 101 PRO n 3 102 GLU n 3 103 TYR n 3 104 ASN n 3 105 ILE n 3 106 PHE n 3 107 GLU n 3 108 ARG n 3 109 ALA n 3 110 HIS n 3 111 ARG n 3 112 LYS n 3 113 TYR n 3 114 PHE n 3 115 TYR n 3 116 THR n 3 117 GLY n 3 118 LEU n 3 119 LEU n 3 120 LYS n 3 121 LYS n 3 122 THR n 3 123 PHE n 3 124 SER n 3 125 LEU n 3 126 LYS n 3 127 PHE n 3 128 ASN n 3 129 MET n 3 130 ASP n 3 131 PRO n 3 132 THR n 3 133 ASP n 3 134 SER n 3 135 THR n 3 136 LYS n 3 137 LEU n 3 138 GLU n 3 139 THR n 3 140 PHE n 3 141 HIS n 3 142 LEU n 3 143 ILE n 3 144 ALA n 3 145 TYR n 3 146 TYR n 3 147 THR n 3 148 GLU n 3 149 LYS n 3 150 ASP n 3 151 ILE n 3 152 HIS n 3 153 GLN n 3 154 GLY n 3 155 SER n 3 156 LEU n 3 157 ARG n 3 158 ARG n 3 159 PRO n 3 160 SER n 3 161 GLU n 3 162 ASN n 3 163 PRO n 3 164 PHE n 3 165 PHE n 3 166 HIS n 3 167 LYS n 3 168 PHE n 3 169 ARG n 3 170 PRO n 3 171 SER n 3 172 GLN n 3 173 LYS n 3 174 LEU n 3 175 LEU n 3 176 ASP n 3 177 ALA n 3 178 LEU n 3 179 GLN n 3 180 LYS n 3 181 VAL n 3 182 ALA n 3 183 VAL n 3 184 GLY n 3 185 ASN n 3 186 GLY n 3 187 ARG n 3 188 SER n 3 189 ASN n 3 190 PRO n 3 191 SER n 3 192 LYS n 3 193 ASN n 3 194 ASN n 3 195 GLU n 3 196 ARG n 3 197 GLY n 3 198 ARG n 3 199 THR n 3 200 LYS n 3 201 ALA n 3 202 HIS n # _entity_src_gen.entity_id 3 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;Baker's yeast ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'YHR177W, Yhr177wp' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain S288c _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details 'a pET21 based vector with an N-terminal 8-his tag followed by a 3C protease cleavage site' _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Saccharomyces cerevisiae' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 559292 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Bl21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type pET _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name H3C _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 1 1 sample ? ? ? ? ? 'DNA synthesis through standard methods and annealing of double stranded DNA.' 2 1 sample ? ? ? ? ? 'DNA synthesis through standard methods and annealing of double stranded DNA.' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 DG 1 1 1 DG DG A . n A 1 2 DC 2 2 2 DC DC A . n A 1 3 DG 3 3 3 DG DG A . n A 1 4 DC 4 4 4 DC DC A . n A 1 5 DG 5 5 5 DG DG A . n A 1 6 DT 6 6 6 DT DT A . n A 1 7 DT 7 7 7 DT DT A . n A 1 8 DA 8 8 8 DA DA A . n A 1 9 DG 9 9 9 DG DG A . n A 1 10 DT 10 10 10 DT DT A . n A 1 11 DG 11 11 11 DG DG A . n A 1 12 DT 12 12 12 DT DT A . n A 1 13 DT 13 13 13 DT DT A . n A 1 14 DT 14 14 14 DT DT A . n A 1 15 DA 15 15 15 DA DA A . n A 1 16 DC 16 16 16 DC DC A . n A 1 17 DG 17 17 17 DG DG A . n A 1 18 DC 18 18 18 DC DC A . n A 1 19 DG 19 19 19 DG DG A . n A 1 20 DG 20 20 20 DG DG A . n B 2 1 DC 1 2 2 DC DC B . n B 2 2 DG 2 3 3 DG DG B . n B 2 3 DC 3 4 4 DC DC B . n B 2 4 DG 4 5 5 DG DG B . n B 2 5 DT 5 6 6 DT DT B . n B 2 6 DA 6 7 7 DA DA B . n B 2 7 DA 7 8 8 DA DA B . n B 2 8 DA 8 9 9 DA DA B . n B 2 9 DC 9 10 10 DC DC B . n B 2 10 DA 10 11 11 DA DA B . n B 2 11 DC 11 12 12 DC DC B . n B 2 12 DT 12 13 13 DT DT B . n B 2 13 DA 13 14 14 DA DA B . n B 2 14 DA 14 15 15 DA DA B . n B 2 15 DC 15 16 16 DC DC B . n B 2 16 DG 16 17 17 DG DG B . n B 2 17 DC 17 18 18 DC DC B . n B 2 18 DG 18 19 19 DG DG B . n B 2 19 DC 19 20 20 DC DC B . n B 2 20 DC 20 21 21 DC DC B . n C 3 1 GLY 1 -1 ? ? ? R . n C 3 2 PRO 2 0 ? ? ? R . n C 3 3 SER 3 1 1 SER SER R . n C 3 4 SER 4 2 2 SER SER R . n C 3 5 PRO 5 3 3 PRO PRO R . n C 3 6 GLY 6 4 4 GLY GLY R . n C 3 7 PRO 7 5 5 PRO PRO R . n C 3 8 THR 8 6 6 THR THR R . n C 3 9 CYS 9 7 7 CYS CYS R . n C 3 10 TYR 10 8 8 TYR TYR R . n C 3 11 GLY 11 9 9 GLY GLY R . n C 3 12 TYR 12 10 10 TYR TYR R . n C 3 13 ILE 13 11 11 ILE ILE R . n C 3 14 ASP 14 12 12 ASP ASP R . n C 3 15 ASP 15 13 13 ASP ASP R . n C 3 16 GLU 16 14 14 GLU GLU R . n C 3 17 GLN 17 15 15 GLN GLN R . n C 3 18 ASP 18 16 16 ASP ASP R . n C 3 19 LEU 19 17 17 LEU LEU R . n C 3 20 ALA 20 18 18 ALA ALA R . n C 3 21 LEU 21 19 19 LEU LEU R . n C 3 22 VAL 22 20 20 VAL VAL R . n C 3 23 PHE 23 21 21 PHE PHE R . n C 3 24 GLN 24 22 22 GLN GLN R . n C 3 25 GLY 25 23 23 GLY GLY R . n C 3 26 VAL 26 24 24 VAL VAL R . n C 3 27 PHE 27 25 25 PHE PHE R . n C 3 28 ASN 28 26 26 ASN ASN R . n C 3 29 GLY 29 27 27 GLY GLY R . n C 3 30 ASN 30 28 28 ASN ASN R . n C 3 31 LEU 31 29 29 LEU LEU R . n C 3 32 ARG 32 30 30 ARG ARG R . n C 3 33 CYS 33 31 31 CYS CYS R . n C 3 34 ILE 34 32 32 ILE ILE R . n C 3 35 GLU 35 33 33 GLU GLU R . n C 3 36 ARG 36 34 34 ARG ARG R . n C 3 37 ARG 37 35 35 ARG ARG R . n C 3 38 PRO 38 36 36 PRO PRO R . n C 3 39 TYR 39 37 37 TYR TYR R . n C 3 40 ASP 40 38 38 ASP ASP R . n C 3 41 ALA 41 39 39 ALA ALA R . n C 3 42 GLU 42 40 40 GLU GLU R . n C 3 43 LYS 43 41 41 LYS LYS R . n C 3 44 VAL 44 42 42 VAL VAL R . n C 3 45 GLU 45 43 43 GLU GLU R . n C 3 46 LEU 46 44 44 LEU LEU R . n C 3 47 VAL 47 45 45 VAL VAL R . n C 3 48 ASN 48 46 46 ASN ASN R . n C 3 49 PRO 49 47 47 PRO PRO R . n C 3 50 GLY 50 48 48 GLY GLY R . n C 3 51 ASN 51 49 49 ASN ASN R . n C 3 52 ILE 52 50 50 ILE ILE R . n C 3 53 PHE 53 51 51 PHE PHE R . n C 3 54 VAL 54 52 52 VAL VAL R . n C 3 55 PHE 55 53 53 PHE PHE R . n C 3 56 ASN 56 54 54 ASN ASN R . n C 3 57 GLU 57 55 55 GLU GLU R . n C 3 58 GLU 58 56 56 GLU GLU R . n C 3 59 LYS 59 57 57 LYS LYS R . n C 3 60 SER 60 58 58 SER SER R . n C 3 61 GLY 61 59 59 GLY GLY R . n C 3 62 ILE 62 60 60 ILE ILE R . n C 3 63 LYS 63 61 61 LYS LYS R . n C 3 64 ARG 64 62 62 ARG ARG R . n C 3 65 TRP 65 63 63 TRP TRP R . n C 3 66 THR 66 64 64 THR THR R . n C 3 67 ASP 67 65 65 ASP ASP R . n C 3 68 GLY 68 66 66 GLY GLY R . n C 3 69 PHE 69 67 67 PHE PHE R . n C 3 70 SER 70 68 68 SER SER R . n C 3 71 TRP 71 69 69 TRP TRP R . n C 3 72 SER 72 70 70 SER SER R . n C 3 73 PRO 73 71 71 PRO PRO R . n C 3 74 SER 74 72 72 SER SER R . n C 3 75 ARG 75 73 73 ARG ARG R . n C 3 76 ILE 76 74 74 ILE ILE R . n C 3 77 SER 77 75 75 SER SER R . n C 3 78 GLY 78 76 76 GLY GLY R . n C 3 79 LYS 79 77 77 LYS LYS R . n C 3 80 PHE 80 78 78 PHE PHE R . n C 3 81 LEU 81 79 79 LEU LEU R . n C 3 82 VAL 82 80 80 VAL VAL R . n C 3 83 TYR 83 81 81 TYR TYR R . n C 3 84 ARG 84 82 82 ARG ARG R . n C 3 85 GLU 85 83 83 GLU GLU R . n C 3 86 TYR 86 84 84 TYR TYR R . n C 3 87 ASN 87 85 85 ASN ASN R . n C 3 88 ARG 88 86 86 ARG ARG R . n C 3 89 LEU 89 87 87 LEU LEU R . n C 3 90 GLY 90 88 88 GLY GLY R . n C 3 91 SER 91 89 89 SER SER R . n C 3 92 THR 92 90 ? ? ? R . n C 3 93 HIS 93 91 ? ? ? R . n C 3 94 ASP 94 92 ? ? ? R . n C 3 95 LEU 95 93 ? ? ? R . n C 3 96 PRO 96 94 ? ? ? R . n C 3 97 LEU 97 95 ? ? ? R . n C 3 98 HIS 98 96 96 HIS HIS R . n C 3 99 ASN 99 97 97 ASN ASN R . n C 3 100 VAL 100 98 98 VAL VAL R . n C 3 101 PRO 101 99 99 PRO PRO R . n C 3 102 GLU 102 100 100 GLU GLU R . n C 3 103 TYR 103 101 101 TYR TYR R . n C 3 104 ASN 104 102 102 ASN ASN R . n C 3 105 ILE 105 103 103 ILE ILE R . n C 3 106 PHE 106 104 104 PHE PHE R . n C 3 107 GLU 107 105 105 GLU GLU R . n C 3 108 ARG 108 106 106 ARG ARG R . n C 3 109 ALA 109 107 107 ALA ALA R . n C 3 110 HIS 110 108 108 HIS HIS R . n C 3 111 ARG 111 109 109 ARG ARG R . n C 3 112 LYS 112 110 110 LYS LYS R . n C 3 113 TYR 113 111 111 TYR TYR R . n C 3 114 PHE 114 112 112 PHE PHE R . n C 3 115 TYR 115 113 113 TYR TYR R . n C 3 116 THR 116 114 114 THR THR R . n C 3 117 GLY 117 115 115 GLY GLY R . n C 3 118 LEU 118 116 116 LEU LEU R . n C 3 119 LEU 119 117 117 LEU LEU R . n C 3 120 LYS 120 118 118 LYS LYS R . n C 3 121 LYS 121 119 119 LYS LYS R . n C 3 122 THR 122 120 120 THR THR R . n C 3 123 PHE 123 121 121 PHE PHE R . n C 3 124 SER 124 122 122 SER SER R . n C 3 125 LEU 125 123 123 LEU LEU R . n C 3 126 LYS 126 124 124 LYS LYS R . n C 3 127 PHE 127 125 125 PHE PHE R . n C 3 128 ASN 128 126 126 ASN ASN R . n C 3 129 MET 129 127 127 MET MET R . n C 3 130 ASP 130 128 ? ? ? R . n C 3 131 PRO 131 129 ? ? ? R . n C 3 132 THR 132 130 130 THR THR R . n C 3 133 ASP 133 131 131 ASP ASP R . n C 3 134 SER 134 132 132 SER SER R . n C 3 135 THR 135 133 133 THR THR R . n C 3 136 LYS 136 134 134 LYS LYS R . n C 3 137 LEU 137 135 135 LEU LEU R . n C 3 138 GLU 138 136 136 GLU GLU R . n C 3 139 THR 139 137 137 THR THR R . n C 3 140 PHE 140 138 138 PHE PHE R . n C 3 141 HIS 141 139 139 HIS HIS R . n C 3 142 LEU 142 140 140 LEU LEU R . n C 3 143 ILE 143 141 141 ILE ILE R . n C 3 144 ALA 144 142 142 ALA ALA R . n C 3 145 TYR 145 143 143 TYR TYR R . n C 3 146 TYR 146 144 144 TYR TYR R . n C 3 147 THR 147 145 145 THR THR R . n C 3 148 GLU 148 146 146 GLU GLU R . n C 3 149 LYS 149 147 147 LYS LYS R . n C 3 150 ASP 150 148 148 ASP ASP R . n C 3 151 ILE 151 149 149 ILE ILE R . n C 3 152 HIS 152 150 150 HIS HIS R . n C 3 153 GLN 153 151 151 GLN GLN R . n C 3 154 GLY 154 152 152 GLY GLY R . n C 3 155 SER 155 153 153 SER SER R . n C 3 156 LEU 156 154 154 LEU LEU R . n C 3 157 ARG 157 155 155 ARG ARG R . n C 3 158 ARG 158 156 156 ARG ARG R . n C 3 159 PRO 159 157 157 PRO PRO R . n C 3 160 SER 160 158 158 SER SER R . n C 3 161 GLU 161 159 159 GLU GLU R . n C 3 162 ASN 162 160 160 ASN ASN R . n C 3 163 PRO 163 161 161 PRO PRO R . n C 3 164 PHE 164 162 162 PHE PHE R . n C 3 165 PHE 165 163 163 PHE PHE R . n C 3 166 HIS 166 164 164 HIS HIS R . n C 3 167 LYS 167 165 165 LYS LYS R . n C 3 168 PHE 168 166 166 PHE PHE R . n C 3 169 ARG 169 167 167 ARG ARG R . n C 3 170 PRO 170 168 168 PRO PRO R . n C 3 171 SER 171 169 169 SER SER R . n C 3 172 GLN 172 170 170 GLN GLN R . n C 3 173 LYS 173 171 171 LYS LYS R . n C 3 174 LEU 174 172 172 LEU LEU R . n C 3 175 LEU 175 173 173 LEU LEU R . n C 3 176 ASP 176 174 174 ASP ASP R . n C 3 177 ALA 177 175 175 ALA ALA R . n C 3 178 LEU 178 176 176 LEU LEU R . n C 3 179 GLN 179 177 177 GLN GLN R . n C 3 180 LYS 180 178 178 LYS LYS R . n C 3 181 VAL 181 179 179 VAL VAL R . n C 3 182 ALA 182 180 180 ALA ALA R . n C 3 183 VAL 183 181 181 VAL VAL R . n C 3 184 GLY 184 182 182 GLY GLY R . n C 3 185 ASN 185 183 183 ASN ASN R . n C 3 186 GLY 186 184 184 GLY GLY R . n C 3 187 ARG 187 185 185 ARG ARG R . n C 3 188 SER 188 186 186 SER SER R . n C 3 189 ASN 189 187 187 ASN ASN R . n C 3 190 PRO 190 188 188 PRO PRO R . n C 3 191 SER 191 189 189 SER SER R . n C 3 192 LYS 192 190 ? ? ? R . n C 3 193 ASN 193 191 ? ? ? R . n C 3 194 ASN 194 192 ? ? ? R . n C 3 195 GLU 195 193 ? ? ? R . n C 3 196 ARG 196 194 ? ? ? R . n C 3 197 GLY 197 195 ? ? ? R . n C 3 198 ARG 198 196 ? ? ? R . n C 3 199 THR 199 197 ? ? ? R . n C 3 200 LYS 200 198 ? ? ? R . n C 3 201 ALA 201 199 ? ? ? R . n C 3 202 HIS 202 200 ? ? ? R . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 301 21 EDO EDO R . E 5 HOH 1 101 22 HOH HOH A . E 5 HOH 2 102 23 HOH HOH A . E 5 HOH 3 103 25 HOH HOH A . E 5 HOH 4 104 26 HOH HOH A . E 5 HOH 5 105 27 HOH HOH A . E 5 HOH 6 106 28 HOH HOH A . E 5 HOH 7 107 29 HOH HOH A . E 5 HOH 8 108 31 HOH HOH A . E 5 HOH 9 109 32 HOH HOH A . E 5 HOH 10 110 33 HOH HOH A . E 5 HOH 11 111 34 HOH HOH A . E 5 HOH 12 112 35 HOH HOH A . E 5 HOH 13 113 36 HOH HOH A . E 5 HOH 14 114 37 HOH HOH A . E 5 HOH 15 115 38 HOH HOH A . E 5 HOH 16 116 25 HOH HOH A . E 5 HOH 17 117 199 HOH HOH A . E 5 HOH 18 118 2 HOH HOH A . F 5 HOH 1 101 22 HOH HOH B . F 5 HOH 2 102 24 HOH HOH B . F 5 HOH 3 103 26 HOH HOH B . F 5 HOH 4 104 27 HOH HOH B . F 5 HOH 5 105 28 HOH HOH B . F 5 HOH 6 106 29 HOH HOH B . F 5 HOH 7 107 31 HOH HOH B . F 5 HOH 8 108 33 HOH HOH B . F 5 HOH 9 109 35 HOH HOH B . F 5 HOH 10 110 36 HOH HOH B . F 5 HOH 11 111 37 HOH HOH B . F 5 HOH 12 112 38 HOH HOH B . F 5 HOH 13 113 39 HOH HOH B . F 5 HOH 14 114 201 HOH HOH B . F 5 HOH 15 115 202 HOH HOH B . F 5 HOH 16 116 205 HOH HOH B . G 5 HOH 1 401 24 HOH HOH R . G 5 HOH 2 402 30 HOH HOH R . G 5 HOH 3 403 30 HOH HOH R . G 5 HOH 4 404 190 HOH HOH R . G 5 HOH 5 405 191 HOH HOH R . G 5 HOH 6 406 192 HOH HOH R . G 5 HOH 7 407 193 HOH HOH R . G 5 HOH 8 408 194 HOH HOH R . G 5 HOH 9 409 196 HOH HOH R . G 5 HOH 10 410 197 HOH HOH R . G 5 HOH 11 411 198 HOH HOH R . G 5 HOH 12 412 200 HOH HOH R . G 5 HOH 13 413 203 HOH HOH R . G 5 HOH 14 414 204 HOH HOH R . G 5 HOH 15 415 206 HOH HOH R . G 5 HOH 16 416 207 HOH HOH R . G 5 HOH 17 417 208 HOH HOH R . G 5 HOH 18 418 209 HOH HOH R . G 5 HOH 19 419 210 HOH HOH R . G 5 HOH 20 420 211 HOH HOH R . G 5 HOH 21 421 212 HOH HOH R . G 5 HOH 22 422 213 HOH HOH R . G 5 HOH 23 423 214 HOH HOH R . G 5 HOH 24 424 215 HOH HOH R . G 5 HOH 25 425 216 HOH HOH R . G 5 HOH 26 426 217 HOH HOH R . G 5 HOH 27 427 218 HOH HOH R . G 5 HOH 28 428 219 HOH HOH R . G 5 HOH 29 429 220 HOH HOH R . G 5 HOH 30 430 221 HOH HOH R . G 5 HOH 31 431 222 HOH HOH R . G 5 HOH 32 432 223 HOH HOH R . G 5 HOH 33 433 224 HOH HOH R . G 5 HOH 34 434 225 HOH HOH R . G 5 HOH 35 435 227 HOH HOH R . G 5 HOH 36 436 228 HOH HOH R . G 5 HOH 37 437 229 HOH HOH R . G 5 HOH 38 438 230 HOH HOH R . G 5 HOH 39 439 231 HOH HOH R . G 5 HOH 40 440 232 HOH HOH R . G 5 HOH 41 441 233 HOH HOH R . G 5 HOH 42 442 234 HOH HOH R . G 5 HOH 43 443 235 HOH HOH R . G 5 HOH 44 444 236 HOH HOH R . G 5 HOH 45 445 237 HOH HOH R . G 5 HOH 46 446 238 HOH HOH R . G 5 HOH 47 447 239 HOH HOH R . G 5 HOH 48 448 240 HOH HOH R . G 5 HOH 49 449 241 HOH HOH R . G 5 HOH 50 450 242 HOH HOH R . G 5 HOH 51 451 244 HOH HOH R . G 5 HOH 52 452 246 HOH HOH R . G 5 HOH 53 453 247 HOH HOH R . G 5 HOH 54 454 248 HOH HOH R . G 5 HOH 55 455 250 HOH HOH R . G 5 HOH 56 456 1 HOH HOH R . G 5 HOH 57 457 3 HOH HOH R . G 5 HOH 58 458 4 HOH HOH R . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 R ARG 109 ? CG ? C ARG 111 CG 2 1 Y 1 R ARG 109 ? CD ? C ARG 111 CD 3 1 Y 1 R ARG 109 ? NE ? C ARG 111 NE 4 1 Y 1 R ARG 109 ? CZ ? C ARG 111 CZ 5 1 Y 1 R ARG 109 ? NH1 ? C ARG 111 NH1 6 1 Y 1 R ARG 109 ? NH2 ? C ARG 111 NH2 # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 SOLVE phasing . ? 2 PHENIX refinement . ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # _cell.entry_id 4M8B _cell.length_a 90.293 _cell.length_b 103.401 _cell.length_c 73.178 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4M8B _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4M8B _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.79 _exptl_crystal.density_percent_sol 74.31 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details ;2 uL drops were a 1 to 1 mixture of protein with a well solution of 9 mM Calcium chloride, 10 mM Spermine, 50 mM Sodium cacodylate pH 7, 4.5% Isopropanol, 3.5% Ethylene glycol. Cryoprotection involved a 4 to 6 mixture of 25% Glucose/Ethylene Glycol and well solution., VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 80 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2013-01-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.115869 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ALS BEAMLINE 8.3.1' _diffrn_source.pdbx_synchrotron_site ALS _diffrn_source.pdbx_synchrotron_beamline 8.3.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.115869 # _reflns.entry_id 4M8B _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 68.012 _reflns.d_resolution_high 2.610 _reflns.number_obs 19969 _reflns.number_all 19969 _reflns.percent_possible_obs 93.600 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.057 _reflns.pdbx_netI_over_sigmaI 9.700 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.600 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.610 _reflns_shell.d_res_low 2.750 _reflns_shell.percent_possible_all 87.900 _reflns_shell.Rmerge_I_obs 0.512 _reflns_shell.pdbx_Rsym_value 0.512 _reflns_shell.meanI_over_sigI_obs 1.500 _reflns_shell.pdbx_redundancy 3.400 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2684 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4M8B _refine.ls_number_reflns_obs 18341 _refine.ls_number_reflns_all 19835 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 38.25 _refine.ls_d_res_high 2.61 _refine.ls_percent_reflns_obs ? _refine.ls_R_factor_obs ? _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1977 _refine.ls_R_factor_R_free 0.2354 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free ? _refine.ls_number_reflns_R_free 2159 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'The starting model was a poor initial model built from MAD phases of a SeMet derivative.' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1484 _refine_hist.pdbx_number_atoms_nucleic_acid 817 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 92 _refine_hist.number_atoms_total 2397 _refine_hist.d_res_high 2.61 _refine_hist.d_res_low 38.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id fhenix_bonds 0.003 ? ? ? ? 'X-RAY DIFFRACTION' fhenix_angles 0.897 ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used ? _refine_ls_shell.d_res_high 2.610 _refine_ls_shell.d_res_low 2.6753 _refine_ls_shell.number_reflns_R_work ? _refine_ls_shell.R_factor_R_work 0.3228 _refine_ls_shell.percent_reflns_obs 85.9 _refine_ls_shell.R_factor_R_free 0.3682 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 130 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1168 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4M8B _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4M8B _struct.title 'Fungal Protein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4M8B _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'WOPR fungal-pathogenesis transcription, WOPR domain, transcription factor, TRANSCRIPTION, TRANSCRIPTION-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP YHX7_YEAST P38867 3 ;PTCYGYIDDEQDLALVFQGVFNGNLRCIERRPYDAEKVELVNPGNIFVFNEEKSGIKRWTDGFSWSPSRISGKFLVYREY NRLGSTHDLPLHNVPEYNIFERAHRKYFYTGLLKKTFSLKFNMDPTDSTKLETFHLIAYYTEKDIHQGSLRRPSENPFFH KFRPSQKLLDALQKVAVGNGRSNPSKNNERGRTKAH ; 6 ? 2 PDB 4M8B 4M8B 1 GCGCGTTAGTGTTTACGCGG ? ? 3 PDB 4M8B 4M8B 2 CGCGTAAACACTAACGCGCC ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4M8B R 7 ? 202 ? P38867 6 ? 201 ? 5 200 2 2 4M8B A 1 ? 20 ? 4M8B 1 ? 20 ? 1 20 3 3 4M8B B 1 ? 20 ? 4M8B 2 ? 21 ? 2 21 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4M8B GLY R 1 ? UNP P38867 ? ? 'expression tag' -1 1 1 4M8B PRO R 2 ? UNP P38867 ? ? 'expression tag' 0 2 1 4M8B SER R 3 ? UNP P38867 ? ? 'expression tag' 1 3 1 4M8B SER R 4 ? UNP P38867 ? ? 'expression tag' 2 4 1 4M8B PRO R 5 ? UNP P38867 ? ? 'expression tag' 3 5 1 4M8B GLY R 6 ? UNP P38867 ? ? 'expression tag' 4 6 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4330 ? 1 MORE -19 ? 1 'SSA (A^2)' 16080 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP C 15 ? ASN C 28 ? ASP R 13 ASN R 26 1 ? 14 HELX_P HELX_P2 2 TYR C 39 ? VAL C 47 ? TYR R 37 VAL R 45 1 ? 9 HELX_P HELX_P3 3 GLU C 57 ? GLY C 61 ? GLU R 55 GLY R 59 1 ? 5 HELX_P HELX_P4 4 GLU C 148 ? GLY C 154 ? GLU R 146 GLY R 152 1 ? 7 HELX_P HELX_P5 5 ARG C 158 ? ARG C 169 ? ARG R 156 ARG R 167 5 ? 12 HELX_P HELX_P6 6 SER C 171 ? LYS C 180 ? SER R 169 LYS R 178 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? A DG 1 N1 ? ? ? 1_555 B DC 19 N3 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? A DG 1 N2 ? ? ? 1_555 B DC 19 O2 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? A DG 1 O6 ? ? ? 1_555 B DC 19 N4 ? ? A DG 1 B DC 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? A DC 2 N3 ? ? ? 1_555 B DG 18 N1 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? A DC 2 N4 ? ? ? 1_555 B DG 18 O6 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? A DC 2 O2 ? ? ? 1_555 B DG 18 N2 ? ? A DC 2 B DG 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? A DG 3 N1 ? ? ? 1_555 B DC 17 N3 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? A DG 3 N2 ? ? ? 1_555 B DC 17 O2 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? A DG 3 O6 ? ? ? 1_555 B DC 17 N4 ? ? A DG 3 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? A DC 4 N3 ? ? ? 1_555 B DG 16 N1 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? A DC 4 N4 ? ? ? 1_555 B DG 16 O6 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? A DC 4 O2 ? ? ? 1_555 B DG 16 N2 ? ? A DC 4 B DG 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? A DG 5 N1 ? ? ? 1_555 B DC 15 N3 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? A DG 5 N2 ? ? ? 1_555 B DC 15 O2 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? A DG 5 O6 ? ? ? 1_555 B DC 15 N4 ? ? A DG 5 B DC 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? A DT 6 N3 ? ? ? 1_555 B DA 14 N1 ? ? A DT 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? A DT 6 O4 ? ? ? 1_555 B DA 14 N6 ? ? A DT 6 B DA 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? A DT 7 N3 ? ? ? 1_555 B DA 13 N1 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? A DT 7 O4 ? ? ? 1_555 B DA 13 N6 ? ? A DT 7 B DA 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? A DA 8 N1 ? ? ? 1_555 B DT 12 N3 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? A DA 8 N6 ? ? ? 1_555 B DT 12 O4 ? ? A DA 8 B DT 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? A DG 9 N1 ? ? ? 1_555 B DC 11 N3 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? A DG 9 N2 ? ? ? 1_555 B DC 11 O2 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? A DG 9 O6 ? ? ? 1_555 B DC 11 N4 ? ? A DG 9 B DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? A DT 10 N3 ? ? ? 1_555 B DA 10 N1 ? ? A DT 10 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? A DT 10 O4 ? ? ? 1_555 B DA 10 N6 ? ? A DT 10 B DA 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? A DG 11 N1 ? ? ? 1_555 B DC 9 N3 ? ? A DG 11 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? A DG 11 N2 ? ? ? 1_555 B DC 9 O2 ? ? A DG 11 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? A DG 11 O6 ? ? ? 1_555 B DC 9 N4 ? ? A DG 11 B DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? A DT 12 N3 ? ? ? 1_555 B DA 8 N1 ? ? A DT 12 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? A DT 12 O4 ? ? ? 1_555 B DA 8 N6 ? ? A DT 12 B DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? A DT 13 N3 ? ? ? 1_555 B DA 7 N1 ? ? A DT 13 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? A DT 13 O4 ? ? ? 1_555 B DA 7 N6 ? ? A DT 13 B DA 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? A DT 14 N3 ? ? ? 1_555 B DA 6 N1 ? ? A DT 14 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? A DT 14 O4 ? ? ? 1_555 B DA 6 N6 ? ? A DT 14 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? A DA 15 N1 ? ? ? 1_555 B DT 5 N3 ? ? A DA 15 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? A DA 15 N6 ? ? ? 1_555 B DT 5 O4 ? ? A DA 15 B DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? A DC 16 N3 ? ? ? 1_555 B DG 4 N1 ? ? A DC 16 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? A DC 16 N4 ? ? ? 1_555 B DG 4 O6 ? ? A DC 16 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? A DC 16 O2 ? ? ? 1_555 B DG 4 N2 ? ? A DC 16 B DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? A DG 17 N1 ? ? ? 1_555 B DC 3 N3 ? ? A DG 17 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? A DG 17 N2 ? ? ? 1_555 B DC 3 O2 ? ? A DG 17 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? A DG 17 O6 ? ? ? 1_555 B DC 3 N4 ? ? A DG 17 B DC 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? A DC 18 N3 ? ? ? 1_555 B DG 2 N1 ? ? A DC 18 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? A DC 18 N4 ? ? ? 1_555 B DG 2 O6 ? ? A DC 18 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? A DC 18 O2 ? ? ? 1_555 B DG 2 N2 ? ? A DC 18 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? A DG 19 N1 ? ? ? 1_555 B DC 1 N3 ? ? A DG 19 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? A DG 19 N2 ? ? ? 1_555 B DC 1 O2 ? ? A DG 19 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? A DG 19 O6 ? ? ? 1_555 B DC 1 N4 ? ? A DG 19 B DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 90 C . ? GLY 88 R SER 91 C ? SER 89 R 1 0.88 2 ALA 109 C . ? ALA 107 R HIS 110 C ? HIS 108 R 1 3.90 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 CYS C 9 ? TYR C 10 ? CYS R 7 TYR R 8 A 2 ASN C 51 ? ASN C 56 ? ASN R 49 ASN R 54 A 3 LEU C 137 ? THR C 147 ? LEU R 135 THR R 145 A 4 TYR C 113 ? ASN C 128 ? TYR R 111 ASN R 126 A 5 PHE C 80 ? ARG C 88 ? PHE R 78 ARG R 86 A 6 ARG C 75 ? SER C 77 ? ARG R 73 SER R 75 B 1 CYS C 9 ? TYR C 10 ? CYS R 7 TYR R 8 B 2 ASN C 51 ? ASN C 56 ? ASN R 49 ASN R 54 B 3 LEU C 137 ? THR C 147 ? LEU R 135 THR R 145 B 4 TYR C 113 ? ASN C 128 ? TYR R 111 ASN R 126 B 5 ILE C 105 ? PHE C 106 ? ILE R 103 PHE R 104 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N CYS C 9 ? N CYS R 7 O ILE C 52 ? O ILE R 50 A 2 3 N PHE C 53 ? N PHE R 51 O ILE C 143 ? O ILE R 141 A 3 4 O TYR C 146 ? O TYR R 144 N LEU C 119 ? N LEU R 117 A 4 5 O PHE C 114 ? O PHE R 112 N ASN C 87 ? N ASN R 85 A 5 6 O VAL C 82 ? O VAL R 80 N ARG C 75 ? N ARG R 73 B 1 2 N CYS C 9 ? N CYS R 7 O ILE C 52 ? O ILE R 50 B 2 3 N PHE C 53 ? N PHE R 51 O ILE C 143 ? O ILE R 141 B 3 4 O TYR C 146 ? O TYR R 144 N LEU C 119 ? N LEU R 117 B 4 5 O TYR C 113 ? O TYR R 111 N PHE C 106 ? N PHE R 104 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id R _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE EDO R 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 DT A 10 ? DT A 10 . ? 1_555 ? 2 AC1 5 DG A 11 ? DG A 11 . ? 1_555 ? 3 AC1 5 PHE C 123 ? PHE R 121 . ? 1_555 ? 4 AC1 5 SER C 124 ? SER R 122 . ? 1_555 ? 5 AC1 5 HIS C 141 ? HIS R 139 . ? 1_555 ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 R _pdbx_validate_close_contact.auth_comp_id_1 MET _pdbx_validate_close_contact.auth_seq_id_1 127 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 N _pdbx_validate_close_contact.auth_asym_id_2 R _pdbx_validate_close_contact.auth_comp_id_2 THR _pdbx_validate_close_contact.auth_seq_id_2 130 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.00 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 DG _pdbx_validate_rmsd_bond.auth_seq_id_1 5 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 P _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 DT _pdbx_validate_rmsd_bond.auth_seq_id_2 6 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.527 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.080 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag Y # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" A DC 4 ? ? "C1'" A DC 4 ? ? N1 A DC 4 ? ? 110.72 108.30 2.42 0.30 N 2 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? "C2'" A DT 10 ? ? 100.97 105.90 -4.93 0.80 N 3 1 "O4'" A DT 10 ? ? "C1'" A DT 10 ? ? N1 A DT 10 ? ? 110.11 108.30 1.81 0.30 N 4 1 "O4'" A DT 14 ? ? "C1'" A DT 14 ? ? N1 A DT 14 ? ? 110.29 108.30 1.99 0.30 N 5 1 "O4'" A DG 20 ? ? "C1'" A DG 20 ? ? N9 A DG 20 ? ? 110.59 108.30 2.29 0.30 N 6 1 "O4'" B DG 17 ? ? "C1'" B DG 17 ? ? N9 B DG 17 ? ? 110.84 108.30 2.54 0.30 N 7 1 "O4'" B DC 18 ? ? "C1'" B DC 18 ? ? N1 B DC 18 ? ? 110.14 108.30 1.84 0.30 N 8 1 "O4'" B DC 20 ? ? "C1'" B DC 20 ? ? N1 B DC 20 ? ? 110.76 108.30 2.46 0.30 N 9 1 N R SER 2 ? ? CA R SER 2 ? ? C R SER 2 ? ? 130.44 111.00 19.44 2.70 N 10 1 C R SER 2 ? ? N R PRO 3 ? ? CD R PRO 3 ? ? 141.39 128.40 12.99 2.10 Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO R 99 ? ? -48.37 150.21 2 1 SER R 132 ? ? 72.98 -155.55 3 1 THR R 133 ? ? -140.47 37.72 4 1 ASN R 187 ? ? -161.46 74.52 # _pdbx_validate_peptide_omega.id 1 _pdbx_validate_peptide_omega.PDB_model_num 1 _pdbx_validate_peptide_omega.auth_comp_id_1 SER _pdbx_validate_peptide_omega.auth_asym_id_1 R _pdbx_validate_peptide_omega.auth_seq_id_1 1 _pdbx_validate_peptide_omega.PDB_ins_code_1 ? _pdbx_validate_peptide_omega.label_alt_id_1 ? _pdbx_validate_peptide_omega.auth_comp_id_2 SER _pdbx_validate_peptide_omega.auth_asym_id_2 R _pdbx_validate_peptide_omega.auth_seq_id_2 2 _pdbx_validate_peptide_omega.PDB_ins_code_2 ? _pdbx_validate_peptide_omega.label_alt_id_2 ? _pdbx_validate_peptide_omega.omega -148.78 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 R GLY -1 ? C GLY 1 2 1 Y 1 R PRO 0 ? C PRO 2 3 1 Y 1 R THR 90 ? C THR 92 4 1 Y 1 R HIS 91 ? C HIS 93 5 1 Y 1 R ASP 92 ? C ASP 94 6 1 Y 1 R LEU 93 ? C LEU 95 7 1 Y 1 R PRO 94 ? C PRO 96 8 1 Y 1 R LEU 95 ? C LEU 97 9 1 Y 1 R ASP 128 ? C ASP 130 10 1 Y 1 R PRO 129 ? C PRO 131 11 1 Y 1 R LYS 190 ? C LYS 192 12 1 Y 1 R ASN 191 ? C ASN 193 13 1 Y 1 R ASN 192 ? C ASN 194 14 1 Y 1 R GLU 193 ? C GLU 195 15 1 Y 1 R ARG 194 ? C ARG 196 16 1 Y 1 R GLY 195 ? C GLY 197 17 1 Y 1 R ARG 196 ? C ARG 198 18 1 Y 1 R THR 197 ? C THR 199 19 1 Y 1 R LYS 198 ? C LYS 200 20 1 Y 1 R ALA 199 ? C ALA 201 21 1 Y 1 R HIS 200 ? C HIS 202 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 EDO C1 C N N 231 EDO O1 O N N 232 EDO C2 C N N 233 EDO O2 O N N 234 EDO H11 H N N 235 EDO H12 H N N 236 EDO HO1 H N N 237 EDO H21 H N N 238 EDO H22 H N N 239 EDO HO2 H N N 240 GLN N N N N 241 GLN CA C N S 242 GLN C C N N 243 GLN O O N N 244 GLN CB C N N 245 GLN CG C N N 246 GLN CD C N N 247 GLN OE1 O N N 248 GLN NE2 N N N 249 GLN OXT O N N 250 GLN H H N N 251 GLN H2 H N N 252 GLN HA H N N 253 GLN HB2 H N N 254 GLN HB3 H N N 255 GLN HG2 H N N 256 GLN HG3 H N N 257 GLN HE21 H N N 258 GLN HE22 H N N 259 GLN HXT H N N 260 GLU N N N N 261 GLU CA C N S 262 GLU C C N N 263 GLU O O N N 264 GLU CB C N N 265 GLU CG C N N 266 GLU CD C N N 267 GLU OE1 O N N 268 GLU OE2 O N N 269 GLU OXT O N N 270 GLU H H N N 271 GLU H2 H N N 272 GLU HA H N N 273 GLU HB2 H N N 274 GLU HB3 H N N 275 GLU HG2 H N N 276 GLU HG3 H N N 277 GLU HE2 H N N 278 GLU HXT H N N 279 GLY N N N N 280 GLY CA C N N 281 GLY C C N N 282 GLY O O N N 283 GLY OXT O N N 284 GLY H H N N 285 GLY H2 H N N 286 GLY HA2 H N N 287 GLY HA3 H N N 288 GLY HXT H N N 289 HIS N N N N 290 HIS CA C N S 291 HIS C C N N 292 HIS O O N N 293 HIS CB C N N 294 HIS CG C Y N 295 HIS ND1 N Y N 296 HIS CD2 C Y N 297 HIS CE1 C Y N 298 HIS NE2 N Y N 299 HIS OXT O N N 300 HIS H H N N 301 HIS H2 H N N 302 HIS HA H N N 303 HIS HB2 H N N 304 HIS HB3 H N N 305 HIS HD1 H N N 306 HIS HD2 H N N 307 HIS HE1 H N N 308 HIS HE2 H N N 309 HIS HXT H N N 310 HOH O O N N 311 HOH H1 H N N 312 HOH H2 H N N 313 ILE N N N N 314 ILE CA C N S 315 ILE C C N N 316 ILE O O N N 317 ILE CB C N S 318 ILE CG1 C N N 319 ILE CG2 C N N 320 ILE CD1 C N N 321 ILE OXT O N N 322 ILE H H N N 323 ILE H2 H N N 324 ILE HA H N N 325 ILE HB H N N 326 ILE HG12 H N N 327 ILE HG13 H N N 328 ILE HG21 H N N 329 ILE HG22 H N N 330 ILE HG23 H N N 331 ILE HD11 H N N 332 ILE HD12 H N N 333 ILE HD13 H N N 334 ILE HXT H N N 335 LEU N N N N 336 LEU CA C N S 337 LEU C C N N 338 LEU O O N N 339 LEU CB C N N 340 LEU CG C N N 341 LEU CD1 C N N 342 LEU CD2 C N N 343 LEU OXT O N N 344 LEU H H N N 345 LEU H2 H N N 346 LEU HA H N N 347 LEU HB2 H N N 348 LEU HB3 H N N 349 LEU HG H N N 350 LEU HD11 H N N 351 LEU HD12 H N N 352 LEU HD13 H N N 353 LEU HD21 H N N 354 LEU HD22 H N N 355 LEU HD23 H N N 356 LEU HXT H N N 357 LYS N N N N 358 LYS CA C N S 359 LYS C C N N 360 LYS O O N N 361 LYS CB C N N 362 LYS CG C N N 363 LYS CD C N N 364 LYS CE C N N 365 LYS NZ N N N 366 LYS OXT O N N 367 LYS H H N N 368 LYS H2 H N N 369 LYS HA H N N 370 LYS HB2 H N N 371 LYS HB3 H N N 372 LYS HG2 H N N 373 LYS HG3 H N N 374 LYS HD2 H N N 375 LYS HD3 H N N 376 LYS HE2 H N N 377 LYS HE3 H N N 378 LYS HZ1 H N N 379 LYS HZ2 H N N 380 LYS HZ3 H N N 381 LYS HXT H N N 382 MET N N N N 383 MET CA C N S 384 MET C C N N 385 MET O O N N 386 MET CB C N N 387 MET CG C N N 388 MET SD S N N 389 MET CE C N N 390 MET OXT O N N 391 MET H H N N 392 MET H2 H N N 393 MET HA H N N 394 MET HB2 H N N 395 MET HB3 H N N 396 MET HG2 H N N 397 MET HG3 H N N 398 MET HE1 H N N 399 MET HE2 H N N 400 MET HE3 H N N 401 MET HXT H N N 402 PHE N N N N 403 PHE CA C N S 404 PHE C C N N 405 PHE O O N N 406 PHE CB C N N 407 PHE CG C Y N 408 PHE CD1 C Y N 409 PHE CD2 C Y N 410 PHE CE1 C Y N 411 PHE CE2 C Y N 412 PHE CZ C Y N 413 PHE OXT O N N 414 PHE H H N N 415 PHE H2 H N N 416 PHE HA H N N 417 PHE HB2 H N N 418 PHE HB3 H N N 419 PHE HD1 H N N 420 PHE HD2 H N N 421 PHE HE1 H N N 422 PHE HE2 H N N 423 PHE HZ H N N 424 PHE HXT H N N 425 PRO N N N N 426 PRO CA C N S 427 PRO C C N N 428 PRO O O N N 429 PRO CB C N N 430 PRO CG C N N 431 PRO CD C N N 432 PRO OXT O N N 433 PRO H H N N 434 PRO HA H N N 435 PRO HB2 H N N 436 PRO HB3 H N N 437 PRO HG2 H N N 438 PRO HG3 H N N 439 PRO HD2 H N N 440 PRO HD3 H N N 441 PRO HXT H N N 442 SER N N N N 443 SER CA C N S 444 SER C C N N 445 SER O O N N 446 SER CB C N N 447 SER OG O N N 448 SER OXT O N N 449 SER H H N N 450 SER H2 H N N 451 SER HA H N N 452 SER HB2 H N N 453 SER HB3 H N N 454 SER HG H N N 455 SER HXT H N N 456 THR N N N N 457 THR CA C N S 458 THR C C N N 459 THR O O N N 460 THR CB C N R 461 THR OG1 O N N 462 THR CG2 C N N 463 THR OXT O N N 464 THR H H N N 465 THR H2 H N N 466 THR HA H N N 467 THR HB H N N 468 THR HG1 H N N 469 THR HG21 H N N 470 THR HG22 H N N 471 THR HG23 H N N 472 THR HXT H N N 473 TRP N N N N 474 TRP CA C N S 475 TRP C C N N 476 TRP O O N N 477 TRP CB C N N 478 TRP CG C Y N 479 TRP CD1 C Y N 480 TRP CD2 C Y N 481 TRP NE1 N Y N 482 TRP CE2 C Y N 483 TRP CE3 C Y N 484 TRP CZ2 C Y N 485 TRP CZ3 C Y N 486 TRP CH2 C Y N 487 TRP OXT O N N 488 TRP H H N N 489 TRP H2 H N N 490 TRP HA H N N 491 TRP HB2 H N N 492 TRP HB3 H N N 493 TRP HD1 H N N 494 TRP HE1 H N N 495 TRP HE3 H N N 496 TRP HZ2 H N N 497 TRP HZ3 H N N 498 TRP HH2 H N N 499 TRP HXT H N N 500 TYR N N N N 501 TYR CA C N S 502 TYR C C N N 503 TYR O O N N 504 TYR CB C N N 505 TYR CG C Y N 506 TYR CD1 C Y N 507 TYR CD2 C Y N 508 TYR CE1 C Y N 509 TYR CE2 C Y N 510 TYR CZ C Y N 511 TYR OH O N N 512 TYR OXT O N N 513 TYR H H N N 514 TYR H2 H N N 515 TYR HA H N N 516 TYR HB2 H N N 517 TYR HB3 H N N 518 TYR HD1 H N N 519 TYR HD2 H N N 520 TYR HE1 H N N 521 TYR HE2 H N N 522 TYR HH H N N 523 TYR HXT H N N 524 VAL N N N N 525 VAL CA C N S 526 VAL C C N N 527 VAL O O N N 528 VAL CB C N N 529 VAL CG1 C N N 530 VAL CG2 C N N 531 VAL OXT O N N 532 VAL H H N N 533 VAL H2 H N N 534 VAL HA H N N 535 VAL HB H N N 536 VAL HG11 H N N 537 VAL HG12 H N N 538 VAL HG13 H N N 539 VAL HG21 H N N 540 VAL HG22 H N N 541 VAL HG23 H N N 542 VAL HXT H N N 543 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 EDO C1 O1 sing N N 232 EDO C1 C2 sing N N 233 EDO C1 H11 sing N N 234 EDO C1 H12 sing N N 235 EDO O1 HO1 sing N N 236 EDO C2 O2 sing N N 237 EDO C2 H21 sing N N 238 EDO C2 H22 sing N N 239 EDO O2 HO2 sing N N 240 GLN N CA sing N N 241 GLN N H sing N N 242 GLN N H2 sing N N 243 GLN CA C sing N N 244 GLN CA CB sing N N 245 GLN CA HA sing N N 246 GLN C O doub N N 247 GLN C OXT sing N N 248 GLN CB CG sing N N 249 GLN CB HB2 sing N N 250 GLN CB HB3 sing N N 251 GLN CG CD sing N N 252 GLN CG HG2 sing N N 253 GLN CG HG3 sing N N 254 GLN CD OE1 doub N N 255 GLN CD NE2 sing N N 256 GLN NE2 HE21 sing N N 257 GLN NE2 HE22 sing N N 258 GLN OXT HXT sing N N 259 GLU N CA sing N N 260 GLU N H sing N N 261 GLU N H2 sing N N 262 GLU CA C sing N N 263 GLU CA CB sing N N 264 GLU CA HA sing N N 265 GLU C O doub N N 266 GLU C OXT sing N N 267 GLU CB CG sing N N 268 GLU CB HB2 sing N N 269 GLU CB HB3 sing N N 270 GLU CG CD sing N N 271 GLU CG HG2 sing N N 272 GLU CG HG3 sing N N 273 GLU CD OE1 doub N N 274 GLU CD OE2 sing N N 275 GLU OE2 HE2 sing N N 276 GLU OXT HXT sing N N 277 GLY N CA sing N N 278 GLY N H sing N N 279 GLY N H2 sing N N 280 GLY CA C sing N N 281 GLY CA HA2 sing N N 282 GLY CA HA3 sing N N 283 GLY C O doub N N 284 GLY C OXT sing N N 285 GLY OXT HXT sing N N 286 HIS N CA sing N N 287 HIS N H sing N N 288 HIS N H2 sing N N 289 HIS CA C sing N N 290 HIS CA CB sing N N 291 HIS CA HA sing N N 292 HIS C O doub N N 293 HIS C OXT sing N N 294 HIS CB CG sing N N 295 HIS CB HB2 sing N N 296 HIS CB HB3 sing N N 297 HIS CG ND1 sing Y N 298 HIS CG CD2 doub Y N 299 HIS ND1 CE1 doub Y N 300 HIS ND1 HD1 sing N N 301 HIS CD2 NE2 sing Y N 302 HIS CD2 HD2 sing N N 303 HIS CE1 NE2 sing Y N 304 HIS CE1 HE1 sing N N 305 HIS NE2 HE2 sing N N 306 HIS OXT HXT sing N N 307 HOH O H1 sing N N 308 HOH O H2 sing N N 309 ILE N CA sing N N 310 ILE N H sing N N 311 ILE N H2 sing N N 312 ILE CA C sing N N 313 ILE CA CB sing N N 314 ILE CA HA sing N N 315 ILE C O doub N N 316 ILE C OXT sing N N 317 ILE CB CG1 sing N N 318 ILE CB CG2 sing N N 319 ILE CB HB sing N N 320 ILE CG1 CD1 sing N N 321 ILE CG1 HG12 sing N N 322 ILE CG1 HG13 sing N N 323 ILE CG2 HG21 sing N N 324 ILE CG2 HG22 sing N N 325 ILE CG2 HG23 sing N N 326 ILE CD1 HD11 sing N N 327 ILE CD1 HD12 sing N N 328 ILE CD1 HD13 sing N N 329 ILE OXT HXT sing N N 330 LEU N CA sing N N 331 LEU N H sing N N 332 LEU N H2 sing N N 333 LEU CA C sing N N 334 LEU CA CB sing N N 335 LEU CA HA sing N N 336 LEU C O doub N N 337 LEU C OXT sing N N 338 LEU CB CG sing N N 339 LEU CB HB2 sing N N 340 LEU CB HB3 sing N N 341 LEU CG CD1 sing N N 342 LEU CG CD2 sing N N 343 LEU CG HG sing N N 344 LEU CD1 HD11 sing N N 345 LEU CD1 HD12 sing N N 346 LEU CD1 HD13 sing N N 347 LEU CD2 HD21 sing N N 348 LEU CD2 HD22 sing N N 349 LEU CD2 HD23 sing N N 350 LEU OXT HXT sing N N 351 LYS N CA sing N N 352 LYS N H sing N N 353 LYS N H2 sing N N 354 LYS CA C sing N N 355 LYS CA CB sing N N 356 LYS CA HA sing N N 357 LYS C O doub N N 358 LYS C OXT sing N N 359 LYS CB CG sing N N 360 LYS CB HB2 sing N N 361 LYS CB HB3 sing N N 362 LYS CG CD sing N N 363 LYS CG HG2 sing N N 364 LYS CG HG3 sing N N 365 LYS CD CE sing N N 366 LYS CD HD2 sing N N 367 LYS CD HD3 sing N N 368 LYS CE NZ sing N N 369 LYS CE HE2 sing N N 370 LYS CE HE3 sing N N 371 LYS NZ HZ1 sing N N 372 LYS NZ HZ2 sing N N 373 LYS NZ HZ3 sing N N 374 LYS OXT HXT sing N N 375 MET N CA sing N N 376 MET N H sing N N 377 MET N H2 sing N N 378 MET CA C sing N N 379 MET CA CB sing N N 380 MET CA HA sing N N 381 MET C O doub N N 382 MET C OXT sing N N 383 MET CB CG sing N N 384 MET CB HB2 sing N N 385 MET CB HB3 sing N N 386 MET CG SD sing N N 387 MET CG HG2 sing N N 388 MET CG HG3 sing N N 389 MET SD CE sing N N 390 MET CE HE1 sing N N 391 MET CE HE2 sing N N 392 MET CE HE3 sing N N 393 MET OXT HXT sing N N 394 PHE N CA sing N N 395 PHE N H sing N N 396 PHE N H2 sing N N 397 PHE CA C sing N N 398 PHE CA CB sing N N 399 PHE CA HA sing N N 400 PHE C O doub N N 401 PHE C OXT sing N N 402 PHE CB CG sing N N 403 PHE CB HB2 sing N N 404 PHE CB HB3 sing N N 405 PHE CG CD1 doub Y N 406 PHE CG CD2 sing Y N 407 PHE CD1 CE1 sing Y N 408 PHE CD1 HD1 sing N N 409 PHE CD2 CE2 doub Y N 410 PHE CD2 HD2 sing N N 411 PHE CE1 CZ doub Y N 412 PHE CE1 HE1 sing N N 413 PHE CE2 CZ sing Y N 414 PHE CE2 HE2 sing N N 415 PHE CZ HZ sing N N 416 PHE OXT HXT sing N N 417 PRO N CA sing N N 418 PRO N CD sing N N 419 PRO N H sing N N 420 PRO CA C sing N N 421 PRO CA CB sing N N 422 PRO CA HA sing N N 423 PRO C O doub N N 424 PRO C OXT sing N N 425 PRO CB CG sing N N 426 PRO CB HB2 sing N N 427 PRO CB HB3 sing N N 428 PRO CG CD sing N N 429 PRO CG HG2 sing N N 430 PRO CG HG3 sing N N 431 PRO CD HD2 sing N N 432 PRO CD HD3 sing N N 433 PRO OXT HXT sing N N 434 SER N CA sing N N 435 SER N H sing N N 436 SER N H2 sing N N 437 SER CA C sing N N 438 SER CA CB sing N N 439 SER CA HA sing N N 440 SER C O doub N N 441 SER C OXT sing N N 442 SER CB OG sing N N 443 SER CB HB2 sing N N 444 SER CB HB3 sing N N 445 SER OG HG sing N N 446 SER OXT HXT sing N N 447 THR N CA sing N N 448 THR N H sing N N 449 THR N H2 sing N N 450 THR CA C sing N N 451 THR CA CB sing N N 452 THR CA HA sing N N 453 THR C O doub N N 454 THR C OXT sing N N 455 THR CB OG1 sing N N 456 THR CB CG2 sing N N 457 THR CB HB sing N N 458 THR OG1 HG1 sing N N 459 THR CG2 HG21 sing N N 460 THR CG2 HG22 sing N N 461 THR CG2 HG23 sing N N 462 THR OXT HXT sing N N 463 TRP N CA sing N N 464 TRP N H sing N N 465 TRP N H2 sing N N 466 TRP CA C sing N N 467 TRP CA CB sing N N 468 TRP CA HA sing N N 469 TRP C O doub N N 470 TRP C OXT sing N N 471 TRP CB CG sing N N 472 TRP CB HB2 sing N N 473 TRP CB HB3 sing N N 474 TRP CG CD1 doub Y N 475 TRP CG CD2 sing Y N 476 TRP CD1 NE1 sing Y N 477 TRP CD1 HD1 sing N N 478 TRP CD2 CE2 doub Y N 479 TRP CD2 CE3 sing Y N 480 TRP NE1 CE2 sing Y N 481 TRP NE1 HE1 sing N N 482 TRP CE2 CZ2 sing Y N 483 TRP CE3 CZ3 doub Y N 484 TRP CE3 HE3 sing N N 485 TRP CZ2 CH2 doub Y N 486 TRP CZ2 HZ2 sing N N 487 TRP CZ3 CH2 sing Y N 488 TRP CZ3 HZ3 sing N N 489 TRP CH2 HH2 sing N N 490 TRP OXT HXT sing N N 491 TYR N CA sing N N 492 TYR N H sing N N 493 TYR N H2 sing N N 494 TYR CA C sing N N 495 TYR CA CB sing N N 496 TYR CA HA sing N N 497 TYR C O doub N N 498 TYR C OXT sing N N 499 TYR CB CG sing N N 500 TYR CB HB2 sing N N 501 TYR CB HB3 sing N N 502 TYR CG CD1 doub Y N 503 TYR CG CD2 sing Y N 504 TYR CD1 CE1 sing Y N 505 TYR CD1 HD1 sing N N 506 TYR CD2 CE2 doub Y N 507 TYR CD2 HD2 sing N N 508 TYR CE1 CZ doub Y N 509 TYR CE1 HE1 sing N N 510 TYR CE2 CZ sing Y N 511 TYR CE2 HE2 sing N N 512 TYR CZ OH sing N N 513 TYR OH HH sing N N 514 TYR OXT HXT sing N N 515 VAL N CA sing N N 516 VAL N H sing N N 517 VAL N H2 sing N N 518 VAL CA C sing N N 519 VAL CA CB sing N N 520 VAL CA HA sing N N 521 VAL C O doub N N 522 VAL C OXT sing N N 523 VAL CB CG1 sing N N 524 VAL CB CG2 sing N N 525 VAL CB HB sing N N 526 VAL CG1 HG11 sing N N 527 VAL CG1 HG12 sing N N 528 VAL CG1 HG13 sing N N 529 VAL CG2 HG21 sing N N 530 VAL CG2 HG22 sing N N 531 VAL CG2 HG23 sing N N 532 VAL OXT HXT sing N N 533 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4M8B 'double helix' 4M8B 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 A DG 1 1_555 B DC 19 1_555 0.150 -0.101 -0.168 -18.540 -8.398 -0.585 1 A_DG1:DC20_B A 1 ? B 20 ? 19 1 1 A DC 2 1_555 B DG 18 1_555 -0.274 -0.237 0.249 -3.972 -8.249 0.042 2 A_DC2:DG19_B A 2 ? B 19 ? 19 1 1 A DG 3 1_555 B DC 17 1_555 0.467 -0.212 0.467 4.894 -9.105 -2.307 3 A_DG3:DC18_B A 3 ? B 18 ? 19 1 1 A DC 4 1_555 B DG 16 1_555 -0.188 -0.299 0.073 -1.208 -6.285 -1.007 4 A_DC4:DG17_B A 4 ? B 17 ? 19 1 1 A DG 5 1_555 B DC 15 1_555 0.397 0.079 0.230 3.584 -12.845 -2.931 5 A_DG5:DC16_B A 5 ? B 16 ? 19 1 1 A DT 6 1_555 B DA 14 1_555 -0.355 -0.337 0.293 -3.522 -20.446 -4.704 6 A_DT6:DA15_B A 6 ? B 15 ? 20 1 1 A DT 7 1_555 B DA 13 1_555 -0.518 -0.500 0.365 -9.075 -26.455 -9.702 7 A_DT7:DA14_B A 7 ? B 14 ? 20 1 1 A DA 8 1_555 B DT 12 1_555 0.073 -0.146 -0.295 -12.255 -6.519 12.017 8 A_DA8:DT13_B A 8 ? B 13 ? 20 1 1 A DG 9 1_555 B DC 11 1_555 -0.052 0.131 0.054 -2.302 -11.607 8.382 9 A_DG9:DC12_B A 9 ? B 12 ? 19 1 1 A DT 10 1_555 B DA 10 1_555 -1.794 0.019 0.018 4.085 -9.394 -0.174 10 A_DT10:DA11_B A 10 ? B 11 ? 20 1 1 A DG 11 1_555 B DC 9 1_555 0.691 -0.150 0.407 3.788 -14.572 -7.067 11 A_DG11:DC10_B A 11 ? B 10 ? 19 1 1 A DT 12 1_555 B DA 8 1_555 -0.254 -0.461 0.134 2.577 -12.275 -1.568 12 A_DT12:DA9_B A 12 ? B 9 ? 20 1 1 A DT 13 1_555 B DA 7 1_555 0.025 -0.470 0.346 -2.598 -18.758 -7.026 13 A_DT13:DA8_B A 13 ? B 8 ? 20 1 1 A DT 14 1_555 B DA 6 1_555 -0.460 -0.171 0.333 -1.964 -8.449 -3.072 14 A_DT14:DA7_B A 14 ? B 7 ? 20 1 1 A DA 15 1_555 B DT 5 1_555 0.144 -0.155 0.369 2.228 -8.756 -2.798 15 A_DA15:DT6_B A 15 ? B 6 ? 20 1 1 A DC 16 1_555 B DG 4 1_555 -0.636 -0.155 0.191 -6.442 -6.181 -2.232 16 A_DC16:DG5_B A 16 ? B 5 ? 19 1 1 A DG 17 1_555 B DC 3 1_555 0.435 -0.003 0.042 -6.486 -5.436 4.517 17 A_DG17:DC4_B A 17 ? B 4 ? 19 1 1 A DC 18 1_555 B DG 2 1_555 0.042 -0.157 0.232 -1.793 -4.842 2.069 18 A_DC18:DG3_B A 18 ? B 3 ? 19 1 1 A DG 19 1_555 B DC 1 1_555 0.034 -0.220 0.508 0.119 -16.291 -1.709 19 A_DG19:DC2_B A 19 ? B 2 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 A DG 1 1_555 B DC 19 1_555 A DC 2 1_555 B DG 18 1_555 -0.765 -0.629 2.968 -1.727 4.210 27.314 -2.233 1.222 2.882 8.837 3.626 27.683 1 AA_DG1DC2:DG19DC20_BB A 1 ? B 20 ? A 2 ? B 19 ? 1 A DC 2 1_555 B DG 18 1_555 A DG 3 1_555 B DC 17 1_555 -0.356 0.305 3.174 -2.280 2.776 39.401 0.132 0.264 3.202 4.107 3.373 39.558 2 AA_DC2DG3:DC18DG19_BB A 2 ? B 19 ? A 3 ? B 18 ? 1 A DG 3 1_555 B DC 17 1_555 A DC 4 1_555 B DG 16 1_555 0.499 -0.247 3.445 5.121 1.749 30.277 -0.831 0.127 3.461 3.316 -9.707 30.745 3 AA_DG3DC4:DG17DC18_BB A 3 ? B 18 ? A 4 ? B 17 ? 1 A DC 4 1_555 B DG 16 1_555 A DG 5 1_555 B DC 15 1_555 -0.613 0.569 3.343 -3.059 2.569 37.652 0.536 0.539 3.410 3.967 4.723 37.855 4 AA_DC4DG5:DC16DG17_BB A 4 ? B 17 ? A 5 ? B 16 ? 1 A DG 5 1_555 B DC 15 1_555 A DT 6 1_555 B DA 14 1_555 -0.391 -1.044 3.351 1.028 -4.055 32.912 -1.120 0.865 3.438 -7.120 -1.806 33.170 5 AA_DG5DT6:DA15DC16_BB A 5 ? B 16 ? A 6 ? B 15 ? 1 A DT 6 1_555 B DA 14 1_555 A DT 7 1_555 B DA 13 1_555 -0.466 -0.526 3.309 -1.265 -1.394 34.286 -0.669 0.588 3.342 -2.363 2.144 34.336 6 AA_DT6DT7:DA14DA15_BB A 6 ? B 15 ? A 7 ? B 14 ? 1 A DT 7 1_555 B DA 13 1_555 A DA 8 1_555 B DT 12 1_555 1.660 1.214 3.535 6.173 -9.502 47.078 2.280 -1.509 3.422 -11.699 -7.599 48.347 7 AA_DT7DA8:DT13DA14_BB A 7 ? B 14 ? A 8 ? B 13 ? 1 A DA 8 1_555 B DT 12 1_555 A DG 9 1_555 B DC 11 1_555 -1.470 0.646 3.183 -4.464 8.122 31.154 -0.312 1.823 3.412 14.719 8.089 32.471 8 AA_DA8DG9:DC12DT13_BB A 8 ? B 13 ? A 9 ? B 12 ? 1 A DG 9 1_555 B DC 11 1_555 A DT 10 1_555 B DA 10 1_555 -0.036 -0.850 3.177 -1.441 1.448 22.140 -2.730 -0.431 3.111 3.760 3.742 22.233 9 AA_DG9DT10:DA11DC12_BB A 9 ? B 12 ? A 10 ? B 11 ? 1 A DT 10 1_555 B DA 10 1_555 A DG 11 1_555 B DC 9 1_555 0.856 0.062 3.384 -2.901 -1.315 39.603 0.248 -1.606 3.312 -1.938 4.274 39.726 10 AA_DT10DG11:DC10DA11_BB A 10 ? B 11 ? A 11 ? B 10 ? 1 A DG 11 1_555 B DC 9 1_555 A DT 12 1_555 B DA 8 1_555 -0.277 -1.008 3.328 5.287 -5.210 33.560 -0.863 1.326 3.361 -8.887 -9.020 34.348 11 AA_DG11DT12:DA9DC10_BB A 11 ? B 10 ? A 12 ? B 9 ? 1 A DT 12 1_555 B DA 8 1_555 A DT 13 1_555 B DA 7 1_555 0.164 -0.682 3.312 1.296 -5.700 42.057 -0.347 -0.092 3.375 -7.897 -1.796 42.443 12 AA_DT12DT13:DA8DA9_BB A 12 ? B 9 ? A 13 ? B 8 ? 1 A DT 13 1_555 B DA 7 1_555 A DT 14 1_555 B DA 6 1_555 0.919 -0.552 3.154 3.471 -5.840 32.564 0.006 -1.029 3.279 -10.275 -6.107 33.246 13 AA_DT13DT14:DA7DA8_BB A 13 ? B 8 ? A 14 ? B 7 ? 1 A DT 14 1_555 B DA 6 1_555 A DA 15 1_555 B DT 5 1_555 -0.113 -0.938 2.994 -0.807 0.667 33.380 -1.732 0.074 2.977 1.161 1.405 33.396 14 AA_DT14DA15:DT6DA7_BB A 14 ? B 7 ? A 15 ? B 6 ? 1 A DA 15 1_555 B DT 5 1_555 A DC 16 1_555 B DG 4 1_555 -0.102 -1.690 3.375 -0.021 -0.594 32.387 -2.921 0.178 3.404 -1.066 0.039 32.392 15 AA_DA15DC16:DG5DT6_BB A 15 ? B 6 ? A 16 ? B 5 ? 1 A DC 16 1_555 B DG 4 1_555 A DG 17 1_555 B DC 3 1_555 -0.328 -0.614 3.244 -1.576 8.487 35.476 -2.126 0.312 3.034 13.679 2.540 36.479 16 AA_DC16DG17:DC4DG5_BB A 16 ? B 5 ? A 17 ? B 4 ? 1 A DG 17 1_555 B DC 3 1_555 A DC 18 1_555 B DG 2 1_555 -0.403 -0.736 3.106 -1.328 4.367 26.064 -2.691 0.552 2.962 9.590 2.917 26.454 17 AA_DG17DC18:DG3DC4_BB A 17 ? B 4 ? A 18 ? B 3 ? 1 A DC 18 1_555 B DG 2 1_555 A DG 19 1_555 B DC 1 1_555 -0.999 0.702 3.380 -3.944 -2.710 38.118 1.419 1.006 3.407 -4.130 6.010 38.406 18 AA_DC18DG19:DC2DG3_BB A 18 ? B 3 ? A 19 ? B 2 ? # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'The starting model was a poor initial model built from MAD phases of a SeMet derivative.' # _atom_sites.entry_id 4M8B _atom_sites.fract_transf_matrix[1][1] 0.011075 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009671 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013665 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_