data_4MDE # _entry.id 4MDE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.387 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4MDE pdb_00004mde 10.2210/pdb4mde/pdb NDB NA2693 ? ? RCSB RCSB081770 ? ? WWPDB D_1000081770 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-06 2 'Structure model' 1 1 2014-02-12 3 'Structure model' 1 2 2024-02-28 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_struct_conn_angle 5 3 'Structure model' struct_conn 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id' 4 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id' 11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.value' 18 3 'Structure model' '_struct_conn.pdbx_dist_value' 19 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 22 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 23 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 25 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 26 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 27 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 28 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 29 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 30 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 31 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 32 3 'Structure model' '_struct_conn.ptnr2_label_seq_id' 33 3 'Structure model' '_struct_ref_seq_dif.details' 34 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 35 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 36 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MDE _pdbx_database_status.recvd_initial_deposition_date 2013-08-22 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4JSY . unspecified PDB 4JT2 . unspecified PDB 4JT4 . unspecified PDB 4JST . unspecified PDB 4GP6 . unspecified PDB 4GP7 . unspecified PDB 4MDF . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Shuman, S.' 1 'Das, U.' 2 'Wang, L.K.' 3 'Smith, P.' 4 'Jacewicz, A.' 5 # _citation.id primary _citation.title ;Structures of bacterial polynucleotide kinase in a Michaelis complex with GTP*Mg2+ and 5'-OH oligonucleotide and a product complex with GDP*Mg2+ and 5'-PO4 oligonucleotide reveal a mechanism of general acid-base catalysis and the determinants of phosphoacceptor recognition. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 42 _citation.page_first 1152 _citation.page_last 1161 _citation.year 2014 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24150947 _citation.pdbx_database_id_DOI 10.1093/nar/gkt936 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Das, U.' 1 ? primary 'Wang, L.K.' 2 ? primary 'Smith, P.' 3 ? primary 'Jacewicz, A.' 4 ? primary 'Shuman, S.' 5 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Metallophosphoesterase 19487.328 2 ? 'D38N, L137M' ? ? 2 polymer syn ;DNA (5'-D(P*CP*CP*TP*GP*T)-3') ; 1470.998 2 ? ? ? ? 3 non-polymer syn "GUANOSINE-5'-DIPHOSPHATE" 443.201 2 ? ? ? ? 4 non-polymer syn 'MAGNESIUM ION' 24.305 2 ? ? ? ? 5 water nat water 18.015 440 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;SMKLTIPELSLVVLIGSSGSGKSTFAKKHFKPTEVISSNFCRGLVSDDENDQTVTGAAFDVLHYIVSKRLQLGKLTVVDA TNVQESARKPLIEIAKDYHCFPVAVVFNLPEKVCQERNKNRTDRQVEEYVIRKHTQQMKKSIKGLQREGFRYVYILNSPE EVEEVVFERQP ; ;SMKLTIPELSLVVLIGSSGSGKSTFAKKHFKPTEVISSNFCRGLVSDDENDQTVTGAAFDVLHYIVSKRLQLGKLTVVDA TNVQESARKPLIEIAKDYHCFPVAVVFNLPEKVCQERNKNRTDRQVEEYVIRKHTQQMKKSIKGLQREGFRYVYILNSPE EVEEVVFERQP ; A,B ? 2 polydeoxyribonucleotide no no '(DC)(DC)(DT)(DG)(DT)' CCTGT C,D ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 "GUANOSINE-5'-DIPHOSPHATE" GDP 4 'MAGNESIUM ION' MG 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 LYS n 1 4 LEU n 1 5 THR n 1 6 ILE n 1 7 PRO n 1 8 GLU n 1 9 LEU n 1 10 SER n 1 11 LEU n 1 12 VAL n 1 13 VAL n 1 14 LEU n 1 15 ILE n 1 16 GLY n 1 17 SER n 1 18 SER n 1 19 GLY n 1 20 SER n 1 21 GLY n 1 22 LYS n 1 23 SER n 1 24 THR n 1 25 PHE n 1 26 ALA n 1 27 LYS n 1 28 LYS n 1 29 HIS n 1 30 PHE n 1 31 LYS n 1 32 PRO n 1 33 THR n 1 34 GLU n 1 35 VAL n 1 36 ILE n 1 37 SER n 1 38 SER n 1 39 ASN n 1 40 PHE n 1 41 CYS n 1 42 ARG n 1 43 GLY n 1 44 LEU n 1 45 VAL n 1 46 SER n 1 47 ASP n 1 48 ASP n 1 49 GLU n 1 50 ASN n 1 51 ASP n 1 52 GLN n 1 53 THR n 1 54 VAL n 1 55 THR n 1 56 GLY n 1 57 ALA n 1 58 ALA n 1 59 PHE n 1 60 ASP n 1 61 VAL n 1 62 LEU n 1 63 HIS n 1 64 TYR n 1 65 ILE n 1 66 VAL n 1 67 SER n 1 68 LYS n 1 69 ARG n 1 70 LEU n 1 71 GLN n 1 72 LEU n 1 73 GLY n 1 74 LYS n 1 75 LEU n 1 76 THR n 1 77 VAL n 1 78 VAL n 1 79 ASP n 1 80 ALA n 1 81 THR n 1 82 ASN n 1 83 VAL n 1 84 GLN n 1 85 GLU n 1 86 SER n 1 87 ALA n 1 88 ARG n 1 89 LYS n 1 90 PRO n 1 91 LEU n 1 92 ILE n 1 93 GLU n 1 94 ILE n 1 95 ALA n 1 96 LYS n 1 97 ASP n 1 98 TYR n 1 99 HIS n 1 100 CYS n 1 101 PHE n 1 102 PRO n 1 103 VAL n 1 104 ALA n 1 105 VAL n 1 106 VAL n 1 107 PHE n 1 108 ASN n 1 109 LEU n 1 110 PRO n 1 111 GLU n 1 112 LYS n 1 113 VAL n 1 114 CYS n 1 115 GLN n 1 116 GLU n 1 117 ARG n 1 118 ASN n 1 119 LYS n 1 120 ASN n 1 121 ARG n 1 122 THR n 1 123 ASP n 1 124 ARG n 1 125 GLN n 1 126 VAL n 1 127 GLU n 1 128 GLU n 1 129 TYR n 1 130 VAL n 1 131 ILE n 1 132 ARG n 1 133 LYS n 1 134 HIS n 1 135 THR n 1 136 GLN n 1 137 GLN n 1 138 MET n 1 139 LYS n 1 140 LYS n 1 141 SER n 1 142 ILE n 1 143 LYS n 1 144 GLY n 1 145 LEU n 1 146 GLN n 1 147 ARG n 1 148 GLU n 1 149 GLY n 1 150 PHE n 1 151 ARG n 1 152 TYR n 1 153 VAL n 1 154 TYR n 1 155 ILE n 1 156 LEU n 1 157 ASN n 1 158 SER n 1 159 PRO n 1 160 GLU n 1 161 GLU n 1 162 VAL n 1 163 GLU n 1 164 GLU n 1 165 VAL n 1 166 VAL n 1 167 PHE n 1 168 GLU n 1 169 ARG n 1 170 GLN n 1 171 PRO n 2 1 DC n 2 2 DC n 2 3 DT n 2 4 DG n 2 5 DT n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene Cthe_2768 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 27405 / DSM 1237' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium thermocellum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 203119 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Obtained from commercial synthetic source' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GDP 'RNA linking' n "GUANOSINE-5'-DIPHOSPHATE" ? 'C10 H15 N5 O11 P2' 443.201 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 0 SER SER A . n A 1 2 MET 2 1 1 MET MET A . n A 1 3 LYS 3 2 2 LYS LYS A . n A 1 4 LEU 4 3 3 LEU LEU A . n A 1 5 THR 5 4 4 THR THR A . n A 1 6 ILE 6 5 5 ILE ILE A . n A 1 7 PRO 7 6 6 PRO PRO A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 LEU 11 10 10 LEU LEU A . n A 1 12 VAL 12 11 11 VAL VAL A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ILE 15 14 14 ILE ILE A . n A 1 16 GLY 16 15 15 GLY GLY A . n A 1 17 SER 17 16 16 SER SER A . n A 1 18 SER 18 17 17 SER SER A . n A 1 19 GLY 19 18 18 GLY GLY A . n A 1 20 SER 20 19 19 SER SER A . n A 1 21 GLY 21 20 20 GLY GLY A . n A 1 22 LYS 22 21 21 LYS LYS A . n A 1 23 SER 23 22 22 SER SER A . n A 1 24 THR 24 23 23 THR THR A . n A 1 25 PHE 25 24 24 PHE PHE A . n A 1 26 ALA 26 25 25 ALA ALA A . n A 1 27 LYS 27 26 26 LYS LYS A . n A 1 28 LYS 28 27 27 LYS LYS A . n A 1 29 HIS 29 28 28 HIS HIS A . n A 1 30 PHE 30 29 29 PHE PHE A . n A 1 31 LYS 31 30 30 LYS LYS A . n A 1 32 PRO 32 31 31 PRO PRO A . n A 1 33 THR 33 32 32 THR THR A . n A 1 34 GLU 34 33 33 GLU GLU A . n A 1 35 VAL 35 34 34 VAL VAL A . n A 1 36 ILE 36 35 35 ILE ILE A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 SER 38 37 37 SER SER A . n A 1 39 ASN 39 38 38 ASN ASN A . n A 1 40 PHE 40 39 39 PHE PHE A . n A 1 41 CYS 41 40 40 CYS CYS A . n A 1 42 ARG 42 41 41 ARG ARG A . n A 1 43 GLY 43 42 42 GLY GLY A . n A 1 44 LEU 44 43 43 LEU LEU A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 SER 46 45 45 SER SER A . n A 1 47 ASP 47 46 46 ASP ASP A . n A 1 48 ASP 48 47 47 ASP ASP A . n A 1 49 GLU 49 48 48 GLU GLU A . n A 1 50 ASN 50 49 49 ASN ASN A . n A 1 51 ASP 51 50 50 ASP ASP A . n A 1 52 GLN 52 51 51 GLN GLN A . n A 1 53 THR 53 52 52 THR THR A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 THR 55 54 54 THR THR A . n A 1 56 GLY 56 55 55 GLY GLY A . n A 1 57 ALA 57 56 56 ALA ALA A . n A 1 58 ALA 58 57 57 ALA ALA A . n A 1 59 PHE 59 58 58 PHE PHE A . n A 1 60 ASP 60 59 59 ASP ASP A . n A 1 61 VAL 61 60 60 VAL VAL A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 HIS 63 62 62 HIS HIS A . n A 1 64 TYR 64 63 63 TYR TYR A . n A 1 65 ILE 65 64 64 ILE ILE A . n A 1 66 VAL 66 65 65 VAL VAL A . n A 1 67 SER 67 66 66 SER SER A . n A 1 68 LYS 68 67 67 LYS LYS A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 LEU 70 69 69 LEU LEU A . n A 1 71 GLN 71 70 70 GLN GLN A . n A 1 72 LEU 72 71 71 LEU LEU A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 LYS 74 73 73 LYS LYS A . n A 1 75 LEU 75 74 74 LEU LEU A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 VAL 77 76 76 VAL VAL A . n A 1 78 VAL 78 77 77 VAL VAL A . n A 1 79 ASP 79 78 78 ASP ASP A . n A 1 80 ALA 80 79 79 ALA ALA A . n A 1 81 THR 81 80 80 THR THR A . n A 1 82 ASN 82 81 81 ASN ASN A . n A 1 83 VAL 83 82 82 VAL VAL A . n A 1 84 GLN 84 83 83 GLN GLN A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 ALA 87 86 86 ALA ALA A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 LYS 89 88 88 LYS LYS A . n A 1 90 PRO 90 89 89 PRO PRO A . n A 1 91 LEU 91 90 90 LEU LEU A . n A 1 92 ILE 92 91 91 ILE ILE A . n A 1 93 GLU 93 92 92 GLU GLU A . n A 1 94 ILE 94 93 93 ILE ILE A . n A 1 95 ALA 95 94 94 ALA ALA A . n A 1 96 LYS 96 95 95 LYS LYS A . n A 1 97 ASP 97 96 96 ASP ASP A . n A 1 98 TYR 98 97 97 TYR TYR A . n A 1 99 HIS 99 98 98 HIS HIS A . n A 1 100 CYS 100 99 99 CYS CYS A . n A 1 101 PHE 101 100 100 PHE PHE A . n A 1 102 PRO 102 101 101 PRO PRO A . n A 1 103 VAL 103 102 102 VAL VAL A . n A 1 104 ALA 104 103 103 ALA ALA A . n A 1 105 VAL 105 104 104 VAL VAL A . n A 1 106 VAL 106 105 105 VAL VAL A . n A 1 107 PHE 107 106 106 PHE PHE A . n A 1 108 ASN 108 107 107 ASN ASN A . n A 1 109 LEU 109 108 108 LEU LEU A . n A 1 110 PRO 110 109 109 PRO PRO A . n A 1 111 GLU 111 110 110 GLU GLU A . n A 1 112 LYS 112 111 111 LYS LYS A . n A 1 113 VAL 113 112 112 VAL VAL A . n A 1 114 CYS 114 113 113 CYS CYS A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 GLU 116 115 115 GLU GLU A . n A 1 117 ARG 117 116 116 ARG ARG A . n A 1 118 ASN 118 117 117 ASN ASN A . n A 1 119 LYS 119 118 118 LYS LYS A . n A 1 120 ASN 120 119 119 ASN ASN A . n A 1 121 ARG 121 120 120 ARG ARG A . n A 1 122 THR 122 121 121 THR THR A . n A 1 123 ASP 123 122 122 ASP ASP A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 GLN 125 124 124 GLN GLN A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 GLU 127 126 126 GLU GLU A . n A 1 128 GLU 128 127 127 GLU GLU A . n A 1 129 TYR 129 128 128 TYR TYR A . n A 1 130 VAL 130 129 129 VAL VAL A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 LYS 133 132 132 LYS LYS A . n A 1 134 HIS 134 133 133 HIS HIS A . n A 1 135 THR 135 134 134 THR THR A . n A 1 136 GLN 136 135 135 GLN GLN A . n A 1 137 GLN 137 136 136 GLN GLN A . n A 1 138 MET 138 137 137 MET MET A . n A 1 139 LYS 139 138 138 LYS LYS A . n A 1 140 LYS 140 139 139 LYS LYS A . n A 1 141 SER 141 140 140 SER SER A . n A 1 142 ILE 142 141 141 ILE ILE A . n A 1 143 LYS 143 142 142 LYS LYS A . n A 1 144 GLY 144 143 143 GLY GLY A . n A 1 145 LEU 145 144 144 LEU LEU A . n A 1 146 GLN 146 145 145 GLN GLN A . n A 1 147 ARG 147 146 146 ARG ARG A . n A 1 148 GLU 148 147 147 GLU GLU A . n A 1 149 GLY 149 148 148 GLY GLY A . n A 1 150 PHE 150 149 149 PHE PHE A . n A 1 151 ARG 151 150 150 ARG ARG A . n A 1 152 TYR 152 151 151 TYR TYR A . n A 1 153 VAL 153 152 152 VAL VAL A . n A 1 154 TYR 154 153 153 TYR TYR A . n A 1 155 ILE 155 154 154 ILE ILE A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 ASN 157 156 156 ASN ASN A . n A 1 158 SER 158 157 157 SER SER A . n A 1 159 PRO 159 158 158 PRO PRO A . n A 1 160 GLU 160 159 159 GLU GLU A . n A 1 161 GLU 161 160 160 GLU GLU A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 GLU 163 162 162 GLU GLU A . n A 1 164 GLU 164 163 163 GLU GLU A . n A 1 165 VAL 165 164 164 VAL VAL A . n A 1 166 VAL 166 165 165 VAL VAL A . n A 1 167 PHE 167 166 166 PHE PHE A . n A 1 168 GLU 168 167 167 GLU GLU A . n A 1 169 ARG 169 168 168 ARG ARG A . n A 1 170 GLN 170 169 169 GLN GLN A . n A 1 171 PRO 171 170 170 PRO PRO A . n B 1 1 SER 1 0 0 SER SER B . n B 1 2 MET 2 1 1 MET MET B . n B 1 3 LYS 3 2 2 LYS LYS B . n B 1 4 LEU 4 3 3 LEU LEU B . n B 1 5 THR 5 4 4 THR THR B . n B 1 6 ILE 6 5 5 ILE ILE B . n B 1 7 PRO 7 6 6 PRO PRO B . n B 1 8 GLU 8 7 7 GLU GLU B . n B 1 9 LEU 9 8 8 LEU LEU B . n B 1 10 SER 10 9 9 SER SER B . n B 1 11 LEU 11 10 10 LEU LEU B . n B 1 12 VAL 12 11 11 VAL VAL B . n B 1 13 VAL 13 12 12 VAL VAL B . n B 1 14 LEU 14 13 13 LEU LEU B . n B 1 15 ILE 15 14 14 ILE ILE B . n B 1 16 GLY 16 15 15 GLY GLY B . n B 1 17 SER 17 16 16 SER SER B . n B 1 18 SER 18 17 17 SER SER B . n B 1 19 GLY 19 18 18 GLY GLY B . n B 1 20 SER 20 19 19 SER SER B . n B 1 21 GLY 21 20 20 GLY GLY B . n B 1 22 LYS 22 21 21 LYS LYS B . n B 1 23 SER 23 22 22 SER SER B . n B 1 24 THR 24 23 23 THR THR B . n B 1 25 PHE 25 24 24 PHE PHE B . n B 1 26 ALA 26 25 25 ALA ALA B . n B 1 27 LYS 27 26 26 LYS LYS B . n B 1 28 LYS 28 27 27 LYS LYS B . n B 1 29 HIS 29 28 28 HIS HIS B . n B 1 30 PHE 30 29 29 PHE PHE B . n B 1 31 LYS 31 30 30 LYS LYS B . n B 1 32 PRO 32 31 31 PRO PRO B . n B 1 33 THR 33 32 32 THR THR B . n B 1 34 GLU 34 33 33 GLU GLU B . n B 1 35 VAL 35 34 34 VAL VAL B . n B 1 36 ILE 36 35 35 ILE ILE B . n B 1 37 SER 37 36 36 SER SER B . n B 1 38 SER 38 37 37 SER SER B . n B 1 39 ASN 39 38 38 ASN ASN B . n B 1 40 PHE 40 39 39 PHE PHE B . n B 1 41 CYS 41 40 40 CYS CYS B . n B 1 42 ARG 42 41 41 ARG ARG B . n B 1 43 GLY 43 42 42 GLY GLY B . n B 1 44 LEU 44 43 43 LEU LEU B . n B 1 45 VAL 45 44 44 VAL VAL B . n B 1 46 SER 46 45 45 SER SER B . n B 1 47 ASP 47 46 46 ASP ASP B . n B 1 48 ASP 48 47 47 ASP ASP B . n B 1 49 GLU 49 48 48 GLU GLU B . n B 1 50 ASN 50 49 49 ASN ASN B . n B 1 51 ASP 51 50 50 ASP ASP B . n B 1 52 GLN 52 51 51 GLN GLN B . n B 1 53 THR 53 52 52 THR THR B . n B 1 54 VAL 54 53 53 VAL VAL B . n B 1 55 THR 55 54 54 THR THR B . n B 1 56 GLY 56 55 55 GLY GLY B . n B 1 57 ALA 57 56 56 ALA ALA B . n B 1 58 ALA 58 57 57 ALA ALA B . n B 1 59 PHE 59 58 58 PHE PHE B . n B 1 60 ASP 60 59 59 ASP ASP B . n B 1 61 VAL 61 60 60 VAL VAL B . n B 1 62 LEU 62 61 61 LEU LEU B . n B 1 63 HIS 63 62 62 HIS HIS B . n B 1 64 TYR 64 63 63 TYR TYR B . n B 1 65 ILE 65 64 64 ILE ILE B . n B 1 66 VAL 66 65 65 VAL VAL B . n B 1 67 SER 67 66 66 SER SER B . n B 1 68 LYS 68 67 67 LYS LYS B . n B 1 69 ARG 69 68 68 ARG ARG B . n B 1 70 LEU 70 69 69 LEU LEU B . n B 1 71 GLN 71 70 70 GLN GLN B . n B 1 72 LEU 72 71 71 LEU LEU B . n B 1 73 GLY 73 72 72 GLY GLY B . n B 1 74 LYS 74 73 73 LYS LYS B . n B 1 75 LEU 75 74 74 LEU LEU B . n B 1 76 THR 76 75 75 THR THR B . n B 1 77 VAL 77 76 76 VAL VAL B . n B 1 78 VAL 78 77 77 VAL VAL B . n B 1 79 ASP 79 78 78 ASP ASP B . n B 1 80 ALA 80 79 79 ALA ALA B . n B 1 81 THR 81 80 80 THR THR B . n B 1 82 ASN 82 81 81 ASN ASN B . n B 1 83 VAL 83 82 82 VAL VAL B . n B 1 84 GLN 84 83 83 GLN GLN B . n B 1 85 GLU 85 84 84 GLU GLU B . n B 1 86 SER 86 85 85 SER SER B . n B 1 87 ALA 87 86 86 ALA ALA B . n B 1 88 ARG 88 87 87 ARG ARG B . n B 1 89 LYS 89 88 88 LYS LYS B . n B 1 90 PRO 90 89 89 PRO PRO B . n B 1 91 LEU 91 90 90 LEU LEU B . n B 1 92 ILE 92 91 91 ILE ILE B . n B 1 93 GLU 93 92 92 GLU GLU B . n B 1 94 ILE 94 93 93 ILE ILE B . n B 1 95 ALA 95 94 94 ALA ALA B . n B 1 96 LYS 96 95 95 LYS LYS B . n B 1 97 ASP 97 96 96 ASP ASP B . n B 1 98 TYR 98 97 97 TYR TYR B . n B 1 99 HIS 99 98 98 HIS HIS B . n B 1 100 CYS 100 99 99 CYS CYS B . n B 1 101 PHE 101 100 100 PHE PHE B . n B 1 102 PRO 102 101 101 PRO PRO B . n B 1 103 VAL 103 102 102 VAL VAL B . n B 1 104 ALA 104 103 103 ALA ALA B . n B 1 105 VAL 105 104 104 VAL VAL B . n B 1 106 VAL 106 105 105 VAL VAL B . n B 1 107 PHE 107 106 106 PHE PHE B . n B 1 108 ASN 108 107 107 ASN ASN B . n B 1 109 LEU 109 108 108 LEU LEU B . n B 1 110 PRO 110 109 109 PRO PRO B . n B 1 111 GLU 111 110 110 GLU GLU B . n B 1 112 LYS 112 111 111 LYS LYS B . n B 1 113 VAL 113 112 112 VAL VAL B . n B 1 114 CYS 114 113 113 CYS CYS B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 GLU 116 115 115 GLU GLU B . n B 1 117 ARG 117 116 116 ARG ARG B . n B 1 118 ASN 118 117 117 ASN ASN B . n B 1 119 LYS 119 118 118 LYS LYS B . n B 1 120 ASN 120 119 119 ASN ASN B . n B 1 121 ARG 121 120 120 ARG ARG B . n B 1 122 THR 122 121 121 THR THR B . n B 1 123 ASP 123 122 122 ASP ASP B . n B 1 124 ARG 124 123 123 ARG ARG B . n B 1 125 GLN 125 124 124 GLN GLN B . n B 1 126 VAL 126 125 125 VAL VAL B . n B 1 127 GLU 127 126 126 GLU GLU B . n B 1 128 GLU 128 127 127 GLU GLU B . n B 1 129 TYR 129 128 128 TYR TYR B . n B 1 130 VAL 130 129 129 VAL VAL B . n B 1 131 ILE 131 130 130 ILE ILE B . n B 1 132 ARG 132 131 131 ARG ARG B . n B 1 133 LYS 133 132 132 LYS LYS B . n B 1 134 HIS 134 133 133 HIS HIS B . n B 1 135 THR 135 134 134 THR THR B . n B 1 136 GLN 136 135 135 GLN GLN B . n B 1 137 GLN 137 136 136 GLN GLN B . n B 1 138 MET 138 137 137 MET MET B . n B 1 139 LYS 139 138 138 LYS LYS B . n B 1 140 LYS 140 139 139 LYS LYS B . n B 1 141 SER 141 140 140 SER SER B . n B 1 142 ILE 142 141 141 ILE ILE B . n B 1 143 LYS 143 142 142 LYS LYS B . n B 1 144 GLY 144 143 143 GLY GLY B . n B 1 145 LEU 145 144 144 LEU LEU B . n B 1 146 GLN 146 145 145 GLN GLN B . n B 1 147 ARG 147 146 146 ARG ARG B . n B 1 148 GLU 148 147 147 GLU GLU B . n B 1 149 GLY 149 148 148 GLY GLY B . n B 1 150 PHE 150 149 149 PHE PHE B . n B 1 151 ARG 151 150 150 ARG ARG B . n B 1 152 TYR 152 151 151 TYR TYR B . n B 1 153 VAL 153 152 152 VAL VAL B . n B 1 154 TYR 154 153 153 TYR TYR B . n B 1 155 ILE 155 154 154 ILE ILE B . n B 1 156 LEU 156 155 155 LEU LEU B . n B 1 157 ASN 157 156 156 ASN ASN B . n B 1 158 SER 158 157 157 SER SER B . n B 1 159 PRO 159 158 158 PRO PRO B . n B 1 160 GLU 160 159 159 GLU GLU B . n B 1 161 GLU 161 160 160 GLU GLU B . n B 1 162 VAL 162 161 161 VAL VAL B . n B 1 163 GLU 163 162 162 GLU GLU B . n B 1 164 GLU 164 163 163 GLU GLU B . n B 1 165 VAL 165 164 164 VAL VAL B . n B 1 166 VAL 166 165 165 VAL VAL B . n B 1 167 PHE 167 166 166 PHE PHE B . n B 1 168 GLU 168 167 167 GLU GLU B . n B 1 169 ARG 169 168 168 ARG ARG B . n B 1 170 GLN 170 169 169 GLN GLN B . n B 1 171 PRO 171 170 170 PRO PRO B . n C 2 1 DC 1 1 1 DC DC C . n C 2 2 DC 2 2 2 DC DC C . n C 2 3 DT 3 3 3 DT DT C . n C 2 4 DG 4 4 4 DG DG C . n C 2 5 DT 5 5 5 DT DT C . n D 2 1 DC 1 1 1 DC DC D . n D 2 2 DC 2 2 2 DC DC D . n D 2 3 DT 3 3 3 DT DT D . n D 2 4 DG 4 4 4 DG DG D . n D 2 5 DT 5 5 5 DT DT D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 GDP 1 1001 1001 GDP GDP A . F 4 MG 1 1002 1002 MG MG A . G 3 GDP 1 1001 1001 GDP GDP B . H 4 MG 1 1002 1002 MG MG B . I 5 HOH 1 1101 1 HOH HOH A . I 5 HOH 2 1102 2 HOH HOH A . I 5 HOH 3 1103 3 HOH HOH A . I 5 HOH 4 1104 7 HOH HOH A . I 5 HOH 5 1105 8 HOH HOH A . I 5 HOH 6 1106 9 HOH HOH A . I 5 HOH 7 1107 11 HOH HOH A . I 5 HOH 8 1108 12 HOH HOH A . I 5 HOH 9 1109 13 HOH HOH A . I 5 HOH 10 1110 14 HOH HOH A . I 5 HOH 11 1111 15 HOH HOH A . I 5 HOH 12 1112 16 HOH HOH A . I 5 HOH 13 1113 18 HOH HOH A . I 5 HOH 14 1114 19 HOH HOH A . I 5 HOH 15 1115 24 HOH HOH A . I 5 HOH 16 1116 25 HOH HOH A . I 5 HOH 17 1117 26 HOH HOH A . I 5 HOH 18 1118 27 HOH HOH A . I 5 HOH 19 1119 28 HOH HOH A . I 5 HOH 20 1120 29 HOH HOH A . I 5 HOH 21 1121 30 HOH HOH A . I 5 HOH 22 1122 39 HOH HOH A . I 5 HOH 23 1123 40 HOH HOH A . I 5 HOH 24 1124 44 HOH HOH A . I 5 HOH 25 1125 45 HOH HOH A . I 5 HOH 26 1126 46 HOH HOH A . I 5 HOH 27 1127 48 HOH HOH A . I 5 HOH 28 1128 52 HOH HOH A . I 5 HOH 29 1129 56 HOH HOH A . I 5 HOH 30 1130 59 HOH HOH A . I 5 HOH 31 1131 60 HOH HOH A . I 5 HOH 32 1132 63 HOH HOH A . I 5 HOH 33 1133 65 HOH HOH A . I 5 HOH 34 1134 66 HOH HOH A . I 5 HOH 35 1135 67 HOH HOH A . I 5 HOH 36 1136 69 HOH HOH A . I 5 HOH 37 1137 70 HOH HOH A . I 5 HOH 38 1138 71 HOH HOH A . I 5 HOH 39 1139 72 HOH HOH A . I 5 HOH 40 1140 73 HOH HOH A . I 5 HOH 41 1141 75 HOH HOH A . I 5 HOH 42 1142 76 HOH HOH A . I 5 HOH 43 1143 78 HOH HOH A . I 5 HOH 44 1144 86 HOH HOH A . I 5 HOH 45 1145 87 HOH HOH A . I 5 HOH 46 1146 89 HOH HOH A . I 5 HOH 47 1147 91 HOH HOH A . I 5 HOH 48 1148 98 HOH HOH A . I 5 HOH 49 1149 99 HOH HOH A . I 5 HOH 50 1150 103 HOH HOH A . I 5 HOH 51 1151 104 HOH HOH A . I 5 HOH 52 1152 106 HOH HOH A . I 5 HOH 53 1153 107 HOH HOH A . I 5 HOH 54 1154 108 HOH HOH A . I 5 HOH 55 1155 109 HOH HOH A . I 5 HOH 56 1156 110 HOH HOH A . I 5 HOH 57 1157 111 HOH HOH A . I 5 HOH 58 1158 114 HOH HOH A . I 5 HOH 59 1159 116 HOH HOH A . I 5 HOH 60 1160 117 HOH HOH A . I 5 HOH 61 1161 121 HOH HOH A . I 5 HOH 62 1162 122 HOH HOH A . I 5 HOH 63 1163 123 HOH HOH A . I 5 HOH 64 1164 127 HOH HOH A . I 5 HOH 65 1165 134 HOH HOH A . I 5 HOH 66 1166 137 HOH HOH A . I 5 HOH 67 1167 139 HOH HOH A . I 5 HOH 68 1168 141 HOH HOH A . I 5 HOH 69 1169 142 HOH HOH A . I 5 HOH 70 1170 145 HOH HOH A . I 5 HOH 71 1171 147 HOH HOH A . I 5 HOH 72 1172 149 HOH HOH A . I 5 HOH 73 1173 151 HOH HOH A . I 5 HOH 74 1174 153 HOH HOH A . I 5 HOH 75 1175 157 HOH HOH A . I 5 HOH 76 1176 158 HOH HOH A . I 5 HOH 77 1177 159 HOH HOH A . I 5 HOH 78 1178 160 HOH HOH A . I 5 HOH 79 1179 161 HOH HOH A . I 5 HOH 80 1180 163 HOH HOH A . I 5 HOH 81 1181 164 HOH HOH A . I 5 HOH 82 1182 168 HOH HOH A . I 5 HOH 83 1183 172 HOH HOH A . I 5 HOH 84 1184 174 HOH HOH A . I 5 HOH 85 1185 178 HOH HOH A . I 5 HOH 86 1186 181 HOH HOH A . I 5 HOH 87 1187 182 HOH HOH A . I 5 HOH 88 1188 185 HOH HOH A . I 5 HOH 89 1189 186 HOH HOH A . I 5 HOH 90 1190 189 HOH HOH A . I 5 HOH 91 1191 190 HOH HOH A . I 5 HOH 92 1192 193 HOH HOH A . I 5 HOH 93 1193 195 HOH HOH A . I 5 HOH 94 1194 198 HOH HOH A . I 5 HOH 95 1195 200 HOH HOH A . I 5 HOH 96 1196 201 HOH HOH A . I 5 HOH 97 1197 202 HOH HOH A . I 5 HOH 98 1198 203 HOH HOH A . I 5 HOH 99 1199 204 HOH HOH A . I 5 HOH 100 1200 205 HOH HOH A . I 5 HOH 101 1201 209 HOH HOH A . I 5 HOH 102 1202 211 HOH HOH A . I 5 HOH 103 1203 212 HOH HOH A . I 5 HOH 104 1204 218 HOH HOH A . I 5 HOH 105 1205 219 HOH HOH A . I 5 HOH 106 1206 222 HOH HOH A . I 5 HOH 107 1207 223 HOH HOH A . I 5 HOH 108 1208 224 HOH HOH A . I 5 HOH 109 1209 226 HOH HOH A . I 5 HOH 110 1210 227 HOH HOH A . I 5 HOH 111 1211 228 HOH HOH A . I 5 HOH 112 1212 230 HOH HOH A . I 5 HOH 113 1213 238 HOH HOH A . I 5 HOH 114 1214 240 HOH HOH A . I 5 HOH 115 1215 241 HOH HOH A . I 5 HOH 116 1216 242 HOH HOH A . I 5 HOH 117 1217 244 HOH HOH A . I 5 HOH 118 1218 247 HOH HOH A . I 5 HOH 119 1219 249 HOH HOH A . I 5 HOH 120 1220 251 HOH HOH A . I 5 HOH 121 1221 252 HOH HOH A . I 5 HOH 122 1222 256 HOH HOH A . I 5 HOH 123 1223 257 HOH HOH A . I 5 HOH 124 1224 260 HOH HOH A . I 5 HOH 125 1225 262 HOH HOH A . I 5 HOH 126 1226 263 HOH HOH A . I 5 HOH 127 1227 269 HOH HOH A . I 5 HOH 128 1228 270 HOH HOH A . I 5 HOH 129 1229 271 HOH HOH A . I 5 HOH 130 1230 273 HOH HOH A . I 5 HOH 131 1231 275 HOH HOH A . I 5 HOH 132 1232 276 HOH HOH A . I 5 HOH 133 1233 277 HOH HOH A . I 5 HOH 134 1234 278 HOH HOH A . I 5 HOH 135 1235 279 HOH HOH A . I 5 HOH 136 1236 282 HOH HOH A . I 5 HOH 137 1237 283 HOH HOH A . I 5 HOH 138 1238 284 HOH HOH A . I 5 HOH 139 1239 285 HOH HOH A . I 5 HOH 140 1240 286 HOH HOH A . I 5 HOH 141 1241 289 HOH HOH A . I 5 HOH 142 1242 291 HOH HOH A . I 5 HOH 143 1243 292 HOH HOH A . I 5 HOH 144 1244 293 HOH HOH A . I 5 HOH 145 1245 298 HOH HOH A . I 5 HOH 146 1246 308 HOH HOH A . I 5 HOH 147 1247 309 HOH HOH A . I 5 HOH 148 1248 314 HOH HOH A . I 5 HOH 149 1249 315 HOH HOH A . I 5 HOH 150 1250 316 HOH HOH A . I 5 HOH 151 1251 317 HOH HOH A . I 5 HOH 152 1252 321 HOH HOH A . I 5 HOH 153 1253 323 HOH HOH A . I 5 HOH 154 1254 328 HOH HOH A . I 5 HOH 155 1255 329 HOH HOH A . I 5 HOH 156 1256 334 HOH HOH A . I 5 HOH 157 1257 337 HOH HOH A . I 5 HOH 158 1258 341 HOH HOH A . I 5 HOH 159 1259 342 HOH HOH A . I 5 HOH 160 1260 345 HOH HOH A . I 5 HOH 161 1261 347 HOH HOH A . I 5 HOH 162 1262 348 HOH HOH A . I 5 HOH 163 1263 349 HOH HOH A . I 5 HOH 164 1264 352 HOH HOH A . I 5 HOH 165 1265 354 HOH HOH A . I 5 HOH 166 1266 356 HOH HOH A . I 5 HOH 167 1267 358 HOH HOH A . I 5 HOH 168 1268 359 HOH HOH A . I 5 HOH 169 1269 361 HOH HOH A . I 5 HOH 170 1270 365 HOH HOH A . I 5 HOH 171 1271 367 HOH HOH A . I 5 HOH 172 1272 368 HOH HOH A . I 5 HOH 173 1273 371 HOH HOH A . I 5 HOH 174 1274 378 HOH HOH A . I 5 HOH 175 1275 380 HOH HOH A . I 5 HOH 176 1276 382 HOH HOH A . I 5 HOH 177 1277 383 HOH HOH A . I 5 HOH 178 1278 384 HOH HOH A . I 5 HOH 179 1279 387 HOH HOH A . I 5 HOH 180 1280 388 HOH HOH A . I 5 HOH 181 1281 391 HOH HOH A . I 5 HOH 182 1282 394 HOH HOH A . I 5 HOH 183 1283 395 HOH HOH A . I 5 HOH 184 1284 403 HOH HOH A . I 5 HOH 185 1285 404 HOH HOH A . I 5 HOH 186 1286 405 HOH HOH A . I 5 HOH 187 1287 406 HOH HOH A . I 5 HOH 188 1288 408 HOH HOH A . I 5 HOH 189 1289 409 HOH HOH A . I 5 HOH 190 1290 411 HOH HOH A . I 5 HOH 191 1291 412 HOH HOH A . I 5 HOH 192 1292 414 HOH HOH A . I 5 HOH 193 1293 417 HOH HOH A . I 5 HOH 194 1294 418 HOH HOH A . I 5 HOH 195 1295 419 HOH HOH A . I 5 HOH 196 1296 420 HOH HOH A . I 5 HOH 197 1297 421 HOH HOH A . I 5 HOH 198 1298 425 HOH HOH A . I 5 HOH 199 1299 429 HOH HOH A . I 5 HOH 200 1300 430 HOH HOH A . I 5 HOH 201 1301 437 HOH HOH A . I 5 HOH 202 1302 440 HOH HOH A . J 5 HOH 1 1101 4 HOH HOH B . J 5 HOH 2 1102 5 HOH HOH B . J 5 HOH 3 1103 6 HOH HOH B . J 5 HOH 4 1104 10 HOH HOH B . J 5 HOH 5 1105 21 HOH HOH B . J 5 HOH 6 1106 23 HOH HOH B . J 5 HOH 7 1107 31 HOH HOH B . J 5 HOH 8 1108 32 HOH HOH B . J 5 HOH 9 1109 35 HOH HOH B . J 5 HOH 10 1110 37 HOH HOH B . J 5 HOH 11 1111 38 HOH HOH B . J 5 HOH 12 1112 41 HOH HOH B . J 5 HOH 13 1113 42 HOH HOH B . J 5 HOH 14 1114 43 HOH HOH B . J 5 HOH 15 1115 47 HOH HOH B . J 5 HOH 16 1116 49 HOH HOH B . J 5 HOH 17 1117 50 HOH HOH B . J 5 HOH 18 1118 51 HOH HOH B . J 5 HOH 19 1119 54 HOH HOH B . J 5 HOH 20 1120 55 HOH HOH B . J 5 HOH 21 1121 57 HOH HOH B . J 5 HOH 22 1122 58 HOH HOH B . J 5 HOH 23 1123 62 HOH HOH B . J 5 HOH 24 1124 64 HOH HOH B . J 5 HOH 25 1125 68 HOH HOH B . J 5 HOH 26 1126 74 HOH HOH B . J 5 HOH 27 1127 77 HOH HOH B . J 5 HOH 28 1128 79 HOH HOH B . J 5 HOH 29 1129 80 HOH HOH B . J 5 HOH 30 1130 81 HOH HOH B . J 5 HOH 31 1131 82 HOH HOH B . J 5 HOH 32 1132 83 HOH HOH B . J 5 HOH 33 1133 84 HOH HOH B . J 5 HOH 34 1134 85 HOH HOH B . J 5 HOH 35 1135 88 HOH HOH B . J 5 HOH 36 1136 90 HOH HOH B . J 5 HOH 37 1137 92 HOH HOH B . J 5 HOH 38 1138 93 HOH HOH B . J 5 HOH 39 1139 95 HOH HOH B . J 5 HOH 40 1140 96 HOH HOH B . J 5 HOH 41 1141 97 HOH HOH B . J 5 HOH 42 1142 100 HOH HOH B . J 5 HOH 43 1143 101 HOH HOH B . J 5 HOH 44 1144 102 HOH HOH B . J 5 HOH 45 1145 112 HOH HOH B . J 5 HOH 46 1146 115 HOH HOH B . J 5 HOH 47 1147 118 HOH HOH B . J 5 HOH 48 1148 119 HOH HOH B . J 5 HOH 49 1149 120 HOH HOH B . J 5 HOH 50 1150 125 HOH HOH B . J 5 HOH 51 1151 126 HOH HOH B . J 5 HOH 52 1152 128 HOH HOH B . J 5 HOH 53 1153 129 HOH HOH B . J 5 HOH 54 1154 130 HOH HOH B . J 5 HOH 55 1155 131 HOH HOH B . J 5 HOH 56 1156 132 HOH HOH B . J 5 HOH 57 1157 135 HOH HOH B . J 5 HOH 58 1158 138 HOH HOH B . J 5 HOH 59 1159 143 HOH HOH B . J 5 HOH 60 1160 144 HOH HOH B . J 5 HOH 61 1161 148 HOH HOH B . J 5 HOH 62 1162 150 HOH HOH B . J 5 HOH 63 1163 154 HOH HOH B . J 5 HOH 64 1164 155 HOH HOH B . J 5 HOH 65 1165 156 HOH HOH B . J 5 HOH 66 1166 162 HOH HOH B . J 5 HOH 67 1167 167 HOH HOH B . J 5 HOH 68 1168 169 HOH HOH B . J 5 HOH 69 1169 175 HOH HOH B . J 5 HOH 70 1170 176 HOH HOH B . J 5 HOH 71 1171 177 HOH HOH B . J 5 HOH 72 1172 179 HOH HOH B . J 5 HOH 73 1173 180 HOH HOH B . J 5 HOH 74 1174 183 HOH HOH B . J 5 HOH 75 1175 184 HOH HOH B . J 5 HOH 76 1176 187 HOH HOH B . J 5 HOH 77 1177 191 HOH HOH B . J 5 HOH 78 1178 192 HOH HOH B . J 5 HOH 79 1179 196 HOH HOH B . J 5 HOH 80 1180 197 HOH HOH B . J 5 HOH 81 1181 199 HOH HOH B . J 5 HOH 82 1182 208 HOH HOH B . J 5 HOH 83 1183 210 HOH HOH B . J 5 HOH 84 1184 214 HOH HOH B . J 5 HOH 85 1185 215 HOH HOH B . J 5 HOH 86 1186 216 HOH HOH B . J 5 HOH 87 1187 217 HOH HOH B . J 5 HOH 88 1188 220 HOH HOH B . J 5 HOH 89 1189 225 HOH HOH B . J 5 HOH 90 1190 229 HOH HOH B . J 5 HOH 91 1191 231 HOH HOH B . J 5 HOH 92 1192 232 HOH HOH B . J 5 HOH 93 1193 233 HOH HOH B . J 5 HOH 94 1194 234 HOH HOH B . J 5 HOH 95 1195 235 HOH HOH B . J 5 HOH 96 1196 236 HOH HOH B . J 5 HOH 97 1197 237 HOH HOH B . J 5 HOH 98 1198 243 HOH HOH B . J 5 HOH 99 1199 245 HOH HOH B . J 5 HOH 100 1200 246 HOH HOH B . J 5 HOH 101 1201 248 HOH HOH B . J 5 HOH 102 1202 250 HOH HOH B . J 5 HOH 103 1203 253 HOH HOH B . J 5 HOH 104 1204 254 HOH HOH B . J 5 HOH 105 1205 255 HOH HOH B . J 5 HOH 106 1206 261 HOH HOH B . J 5 HOH 107 1207 264 HOH HOH B . J 5 HOH 108 1208 265 HOH HOH B . J 5 HOH 109 1209 266 HOH HOH B . J 5 HOH 110 1210 267 HOH HOH B . J 5 HOH 111 1211 268 HOH HOH B . J 5 HOH 112 1212 274 HOH HOH B . J 5 HOH 113 1213 280 HOH HOH B . J 5 HOH 114 1214 281 HOH HOH B . J 5 HOH 115 1215 287 HOH HOH B . J 5 HOH 116 1216 288 HOH HOH B . J 5 HOH 117 1217 290 HOH HOH B . J 5 HOH 118 1218 294 HOH HOH B . J 5 HOH 119 1219 296 HOH HOH B . J 5 HOH 120 1220 297 HOH HOH B . J 5 HOH 121 1221 299 HOH HOH B . J 5 HOH 122 1222 300 HOH HOH B . J 5 HOH 123 1223 301 HOH HOH B . J 5 HOH 124 1224 302 HOH HOH B . J 5 HOH 125 1225 303 HOH HOH B . J 5 HOH 126 1226 304 HOH HOH B . J 5 HOH 127 1227 305 HOH HOH B . J 5 HOH 128 1228 306 HOH HOH B . J 5 HOH 129 1229 313 HOH HOH B . J 5 HOH 130 1230 318 HOH HOH B . J 5 HOH 131 1231 319 HOH HOH B . J 5 HOH 132 1232 320 HOH HOH B . J 5 HOH 133 1233 322 HOH HOH B . J 5 HOH 134 1234 324 HOH HOH B . J 5 HOH 135 1235 325 HOH HOH B . J 5 HOH 136 1236 326 HOH HOH B . J 5 HOH 137 1237 327 HOH HOH B . J 5 HOH 138 1238 330 HOH HOH B . J 5 HOH 139 1239 331 HOH HOH B . J 5 HOH 140 1240 332 HOH HOH B . J 5 HOH 141 1241 333 HOH HOH B . J 5 HOH 142 1242 335 HOH HOH B . J 5 HOH 143 1243 336 HOH HOH B . J 5 HOH 144 1244 340 HOH HOH B . J 5 HOH 145 1245 343 HOH HOH B . J 5 HOH 146 1246 346 HOH HOH B . J 5 HOH 147 1247 350 HOH HOH B . J 5 HOH 148 1248 351 HOH HOH B . J 5 HOH 149 1249 353 HOH HOH B . J 5 HOH 150 1250 357 HOH HOH B . J 5 HOH 151 1251 363 HOH HOH B . J 5 HOH 152 1252 366 HOH HOH B . J 5 HOH 153 1253 369 HOH HOH B . J 5 HOH 154 1254 370 HOH HOH B . J 5 HOH 155 1255 372 HOH HOH B . J 5 HOH 156 1256 373 HOH HOH B . J 5 HOH 157 1257 375 HOH HOH B . J 5 HOH 158 1258 377 HOH HOH B . J 5 HOH 159 1259 379 HOH HOH B . J 5 HOH 160 1260 386 HOH HOH B . J 5 HOH 161 1261 389 HOH HOH B . J 5 HOH 162 1262 393 HOH HOH B . J 5 HOH 163 1263 396 HOH HOH B . J 5 HOH 164 1264 397 HOH HOH B . J 5 HOH 165 1265 398 HOH HOH B . J 5 HOH 166 1266 399 HOH HOH B . J 5 HOH 167 1267 400 HOH HOH B . J 5 HOH 168 1268 401 HOH HOH B . J 5 HOH 169 1269 402 HOH HOH B . J 5 HOH 170 1270 407 HOH HOH B . J 5 HOH 171 1271 410 HOH HOH B . J 5 HOH 172 1272 415 HOH HOH B . J 5 HOH 173 1273 422 HOH HOH B . J 5 HOH 174 1274 423 HOH HOH B . J 5 HOH 175 1275 424 HOH HOH B . J 5 HOH 176 1276 426 HOH HOH B . J 5 HOH 177 1277 427 HOH HOH B . J 5 HOH 178 1278 431 HOH HOH B . J 5 HOH 179 1279 432 HOH HOH B . J 5 HOH 180 1280 433 HOH HOH B . J 5 HOH 181 1281 434 HOH HOH B . K 5 HOH 1 101 17 HOH HOH C . K 5 HOH 2 102 20 HOH HOH C . K 5 HOH 3 103 33 HOH HOH C . K 5 HOH 4 104 36 HOH HOH C . K 5 HOH 5 105 94 HOH HOH C . K 5 HOH 6 106 113 HOH HOH C . K 5 HOH 7 107 133 HOH HOH C . K 5 HOH 8 108 136 HOH HOH C . K 5 HOH 9 109 140 HOH HOH C . K 5 HOH 10 110 146 HOH HOH C . K 5 HOH 11 111 165 HOH HOH C . K 5 HOH 12 112 166 HOH HOH C . K 5 HOH 13 113 171 HOH HOH C . K 5 HOH 14 114 194 HOH HOH C . K 5 HOH 15 115 206 HOH HOH C . K 5 HOH 16 116 207 HOH HOH C . K 5 HOH 17 117 295 HOH HOH C . K 5 HOH 18 118 310 HOH HOH C . K 5 HOH 19 119 311 HOH HOH C . K 5 HOH 20 120 312 HOH HOH C . K 5 HOH 21 121 338 HOH HOH C . K 5 HOH 22 122 374 HOH HOH C . K 5 HOH 23 123 381 HOH HOH C . K 5 HOH 24 124 385 HOH HOH C . K 5 HOH 25 125 390 HOH HOH C . K 5 HOH 26 126 392 HOH HOH C . K 5 HOH 27 127 413 HOH HOH C . K 5 HOH 28 128 435 HOH HOH C . K 5 HOH 29 129 436 HOH HOH C . K 5 HOH 30 130 439 HOH HOH C . L 5 HOH 1 101 22 HOH HOH D . L 5 HOH 2 102 34 HOH HOH D . L 5 HOH 3 103 53 HOH HOH D . L 5 HOH 4 104 61 HOH HOH D . L 5 HOH 5 105 105 HOH HOH D . L 5 HOH 6 106 124 HOH HOH D . L 5 HOH 7 107 152 HOH HOH D . L 5 HOH 8 108 170 HOH HOH D . L 5 HOH 9 109 173 HOH HOH D . L 5 HOH 10 110 188 HOH HOH D . L 5 HOH 11 111 213 HOH HOH D . L 5 HOH 12 112 221 HOH HOH D . L 5 HOH 13 113 239 HOH HOH D . L 5 HOH 14 114 258 HOH HOH D . L 5 HOH 15 115 259 HOH HOH D . L 5 HOH 16 116 272 HOH HOH D . L 5 HOH 17 117 307 HOH HOH D . L 5 HOH 18 118 339 HOH HOH D . L 5 HOH 19 119 344 HOH HOH D . L 5 HOH 20 120 355 HOH HOH D . L 5 HOH 21 121 360 HOH HOH D . L 5 HOH 22 122 362 HOH HOH D . L 5 HOH 23 123 364 HOH HOH D . L 5 HOH 24 124 376 HOH HOH D . L 5 HOH 25 125 416 HOH HOH D . L 5 HOH 26 126 428 HOH HOH D . L 5 HOH 27 127 438 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHENIX phasing . ? 6 # _cell.entry_id 4MDE _cell.length_a 54.440 _cell.length_b 73.120 _cell.length_c 119.040 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MDE _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4MDE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_percent_sol 56.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5.0 _exptl_crystal_grow.pdbx_details ;100 mM sodium citrate, pH 5.0, 2 mM guanosine diphosphate, 100mM magnesium chloride,18-24% PEG 6000,1.1 mM short DNA strand , VAPOR DIFFUSION, HANGING DROP, temperature 298.0K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 130 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-08-14 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X25' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X25 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.1 # _reflns.entry_id 4MDE _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F -999 _reflns.d_resolution_low 46.2 _reflns.d_resolution_high 1.8 _reflns.number_obs 43723 _reflns.number_all 44706 _reflns.percent_possible_obs 97.8 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.8 _reflns_shell.d_res_low 1.9 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4MDE _refine.ls_number_reflns_obs 43651 _refine.ls_number_reflns_all 44862 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.995 _refine.ls_d_res_high 1.800 _refine.ls_percent_reflns_obs 97.33 _refine.ls_R_factor_obs 0.1675 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1644 _refine.ls_R_factor_R_free 0.2056 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 7.88 _refine.ls_number_reflns_R_free 3439 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'molecular refinement' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details '8% of data chosen at random' _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.18 _refine.pdbx_overall_phase_error 22.19 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2738 _refine_hist.pdbx_number_atoms_nucleic_acid 202 _refine_hist.pdbx_number_atoms_ligand 58 _refine_hist.number_atoms_solvent 440 _refine_hist.number_atoms_total 3438 _refine_hist.d_res_high 1.800 _refine_hist.d_res_low 40.995 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 3089 ? 'X-RAY DIFFRACTION' f_angle_d 1.084 ? ? 4226 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.352 ? ? 1206 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.071 ? ? 481 ? 'X-RAY DIFFRACTION' f_plane_restr 0.004 ? ? 503 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.8000 1.8247 1642 0.2228 98.00 0.2708 . . 123 . . . . 'X-RAY DIFFRACTION' . 1.8247 1.8507 1562 0.2063 98.00 0.2732 . . 144 . . . . 'X-RAY DIFFRACTION' . 1.8507 1.8784 1565 0.1925 97.00 0.2308 . . 146 . . . . 'X-RAY DIFFRACTION' . 1.8784 1.9077 1539 0.1795 97.00 0.2035 . . 148 . . . . 'X-RAY DIFFRACTION' . 1.9077 1.9390 1620 0.1759 98.00 0.2408 . . 127 . . . . 'X-RAY DIFFRACTION' . 1.9390 1.9724 1616 0.1712 98.00 0.2471 . . 113 . . . . 'X-RAY DIFFRACTION' . 1.9724 2.0083 1587 0.1746 98.00 0.2242 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.0083 2.0469 1562 0.1687 96.00 0.2305 . . 138 . . . . 'X-RAY DIFFRACTION' . 2.0469 2.0887 1619 0.1586 98.00 0.1952 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.0887 2.1341 1564 0.1582 98.00 0.2156 . . 142 . . . . 'X-RAY DIFFRACTION' . 2.1341 2.1838 1601 0.1563 97.00 0.2082 . . 135 . . . . 'X-RAY DIFFRACTION' . 2.1838 2.2384 1588 0.1632 98.00 0.2155 . . 136 . . . . 'X-RAY DIFFRACTION' . 2.2384 2.2989 1578 0.1600 96.00 0.2374 . . 140 . . . . 'X-RAY DIFFRACTION' . 2.2989 2.3665 1621 0.1625 98.00 0.2292 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.3665 2.4429 1607 0.1653 98.00 0.2350 . . 119 . . . . 'X-RAY DIFFRACTION' . 2.4429 2.5302 1600 0.1668 97.00 0.2327 . . 151 . . . . 'X-RAY DIFFRACTION' . 2.5302 2.6315 1633 0.1755 99.00 0.2114 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.6315 2.7512 1592 0.1628 98.00 0.2185 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.7512 2.8962 1626 0.1668 98.00 0.1884 . . 149 . . . . 'X-RAY DIFFRACTION' . 2.8962 3.0776 1618 0.1651 98.00 0.1901 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.0776 3.3152 1663 0.1679 99.00 0.1853 . . 132 . . . . 'X-RAY DIFFRACTION' . 3.3152 3.6486 1676 0.1611 99.00 0.1945 . . 139 . . . . 'X-RAY DIFFRACTION' . 3.6486 4.1761 1637 0.1466 98.00 0.1792 . . 139 . . . . 'X-RAY DIFFRACTION' . 4.1761 5.2597 1637 0.1432 96.00 0.1736 . . 137 . . . . 'X-RAY DIFFRACTION' . 5.2597 41.0060 1659 0.1788 92.00 0.2136 . . 147 . . . . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4MDE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4MDE _struct.title 'Structure of bacterial polynucleotide kinase product complex bound to GDP and DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MDE _struct_keywords.pdbx_keywords TRANSFERASE/DNA _struct_keywords.text 'RNA repair, P-loop phosphotransferase, transferase, HYDROLASE-DNA complex, TRANSFERASE-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 3 ? H N N 4 ? I N N 5 ? J N N 5 ? K N N 5 ? L N N 5 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP A3DJ38_CLOTH A3DJ38 1 ;MKLTIPELSLVVLIGSSGSGKSTFAKKHFKPTEVISSDFCRGLVSDDENDQTVTGAAFDVLHYIVSKRLQLGKLTVVDAT NVQESARKPLIEIAKDYHCFPVAVVFNLPEKVCQERNKNRTDRQVEEYVIRKHTQQLKKSIKGLQREGFRYVYILNSPEE VEEVVFERQP ; 1 ? 2 PDB 4MDE 4MDE 2 CCTGT ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4MDE A 2 ? 171 ? A3DJ38 1 ? 170 ? 1 170 2 1 4MDE B 2 ? 171 ? A3DJ38 1 ? 170 ? 1 170 3 2 4MDE C 1 ? 5 ? 4MDE 1 ? 5 ? 1 5 4 2 4MDE D 1 ? 5 ? 4MDE 1 ? 5 ? 1 5 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MDE SER A 1 ? UNP A3DJ38 ? ? 'expression tag' 0 1 1 4MDE ASN A 39 ? UNP A3DJ38 ASP 38 'engineered mutation' 38 2 1 4MDE MET A 138 ? UNP A3DJ38 LEU 137 'engineered mutation' 137 3 2 4MDE SER B 1 ? UNP A3DJ38 ? ? 'expression tag' 0 4 2 4MDE ASN B 39 ? UNP A3DJ38 ASP 38 'engineered mutation' 38 5 2 4MDE MET B 138 ? UNP A3DJ38 LEU 137 'engineered mutation' 137 6 # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? tetrameric 4 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 6280 ? 2 MORE -62 ? 2 'SSA (A^2)' 16540 ? # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D,E,F,G,H,I,J,K,L 2 1 A,C,E,F,I,K 2 2 B,D,G,H,J,L # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_455 -x-1/2,-y,z+1/2 -1.0000000000 0.0000000000 0.0000000000 -27.2200000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 59.5200000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 21 ? PHE A 30 ? GLY A 20 PHE A 29 1 ? 10 HELX_P HELX_P2 2 LYS A 31 ? THR A 33 ? LYS A 30 THR A 32 5 ? 3 HELX_P HELX_P3 3 SER A 38 ? ASP A 47 ? SER A 37 ASP A 46 1 ? 10 HELX_P HELX_P4 4 ASP A 51 ? THR A 53 ? ASP A 50 THR A 52 5 ? 3 HELX_P HELX_P5 5 VAL A 54 ? LEU A 72 ? VAL A 53 LEU A 71 1 ? 19 HELX_P HELX_P6 6 GLN A 84 ? TYR A 98 ? GLN A 83 TYR A 97 1 ? 15 HELX_P HELX_P7 7 PRO A 110 ? ASN A 120 ? PRO A 109 ASN A 119 1 ? 11 HELX_P HELX_P8 8 GLU A 127 ? ILE A 142 ? GLU A 126 ILE A 141 1 ? 16 HELX_P HELX_P9 9 GLY A 144 ? GLY A 149 ? GLY A 143 GLY A 148 1 ? 6 HELX_P HELX_P10 10 SER A 158 ? GLU A 164 ? SER A 157 GLU A 163 1 ? 7 HELX_P HELX_P11 11 GLY B 21 ? PHE B 30 ? GLY B 20 PHE B 29 1 ? 10 HELX_P HELX_P12 12 LYS B 31 ? THR B 33 ? LYS B 30 THR B 32 5 ? 3 HELX_P HELX_P13 13 SER B 38 ? ASP B 47 ? SER B 37 ASP B 46 1 ? 10 HELX_P HELX_P14 14 ASP B 51 ? THR B 53 ? ASP B 50 THR B 52 5 ? 3 HELX_P HELX_P15 15 VAL B 54 ? LEU B 72 ? VAL B 53 LEU B 71 1 ? 19 HELX_P HELX_P16 16 GLN B 84 ? TYR B 98 ? GLN B 83 TYR B 97 1 ? 15 HELX_P HELX_P17 17 PRO B 110 ? ARG B 121 ? PRO B 109 ARG B 120 1 ? 12 HELX_P HELX_P18 18 GLU B 127 ? ILE B 142 ? GLU B 126 ILE B 141 1 ? 16 HELX_P HELX_P19 19 GLY B 144 ? GLY B 149 ? GLY B 143 GLY B 148 1 ? 6 HELX_P HELX_P20 20 SER B 158 ? GLU B 164 ? SER B 157 GLU B 163 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A SER 23 OG ? ? ? 1_555 F MG . MG ? ? A SER 22 A MG 1002 1_555 ? ? ? ? ? ? ? 2.126 ? ? metalc2 metalc ? ? E GDP . O1B ? ? ? 1_555 F MG . MG ? ? A GDP 1001 A MG 1002 1_555 ? ? ? ? ? ? ? 2.008 ? ? metalc3 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1002 A HOH 1101 1_555 ? ? ? ? ? ? ? 2.173 ? ? metalc4 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1002 A HOH 1102 1_555 ? ? ? ? ? ? ? 2.207 ? ? metalc5 metalc ? ? F MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1002 A HOH 1103 1_555 ? ? ? ? ? ? ? 2.113 ? ? metalc6 metalc ? ? F MG . MG ? ? ? 1_555 C DC 1 OP3 ? ? A MG 1002 C DC 1 1_555 ? ? ? ? ? ? ? 2.095 ? ? metalc7 metalc ? ? B SER 23 OG ? ? ? 1_555 H MG . MG ? ? B SER 22 B MG 1002 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc8 metalc ? ? G GDP . O1B ? ? ? 1_555 H MG . MG ? ? B GDP 1001 B MG 1002 1_555 ? ? ? ? ? ? ? 2.080 ? ? metalc9 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 1002 B HOH 1101 1_555 ? ? ? ? ? ? ? 2.091 ? ? metalc10 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 1002 B HOH 1102 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc11 metalc ? ? H MG . MG ? ? ? 1_555 J HOH . O ? ? B MG 1002 B HOH 1103 1_555 ? ? ? ? ? ? ? 2.093 ? ? metalc12 metalc ? ? H MG . MG ? ? ? 1_555 D DC 1 OP1 ? ? B MG 1002 D DC 1 1_555 ? ? ? ? ? ? ? 2.059 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O1B ? E GDP . ? A GDP 1001 ? 1_555 93.1 ? 2 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1101 ? 1_555 90.0 ? 3 O1B ? E GDP . ? A GDP 1001 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1101 ? 1_555 88.8 ? 4 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1102 ? 1_555 80.4 ? 5 O1B ? E GDP . ? A GDP 1001 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1102 ? 1_555 173.0 ? 6 O ? I HOH . ? A HOH 1101 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1102 ? 1_555 88.6 ? 7 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1103 ? 1_555 85.8 ? 8 O1B ? E GDP . ? A GDP 1001 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1103 ? 1_555 93.1 ? 9 O ? I HOH . ? A HOH 1101 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1103 ? 1_555 175.5 ? 10 O ? I HOH . ? A HOH 1102 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 O ? I HOH . ? A HOH 1103 ? 1_555 89.0 ? 11 OG ? A SER 23 ? A SER 22 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 OP3 ? C DC 1 ? C DC 1 ? 1_555 167.5 ? 12 O1B ? E GDP . ? A GDP 1001 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 OP3 ? C DC 1 ? C DC 1 ? 1_555 97.2 ? 13 O ? I HOH . ? A HOH 1101 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 OP3 ? C DC 1 ? C DC 1 ? 1_555 97.3 ? 14 O ? I HOH . ? A HOH 1102 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 OP3 ? C DC 1 ? C DC 1 ? 1_555 89.5 ? 15 O ? I HOH . ? A HOH 1103 ? 1_555 MG ? F MG . ? A MG 1002 ? 1_555 OP3 ? C DC 1 ? C DC 1 ? 1_555 86.6 ? 16 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O1B ? G GDP . ? B GDP 1001 ? 1_555 91.2 ? 17 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1101 ? 1_555 89.8 ? 18 O1B ? G GDP . ? B GDP 1001 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1101 ? 1_555 88.2 ? 19 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1102 ? 1_555 83.8 ? 20 O1B ? G GDP . ? B GDP 1001 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1102 ? 1_555 174.4 ? 21 O ? J HOH . ? B HOH 1101 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1102 ? 1_555 89.2 ? 22 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1103 ? 1_555 84.8 ? 23 O1B ? G GDP . ? B GDP 1001 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1103 ? 1_555 94.2 ? 24 O ? J HOH . ? B HOH 1101 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1103 ? 1_555 174.2 ? 25 O ? J HOH . ? B HOH 1102 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 O ? J HOH . ? B HOH 1103 ? 1_555 88.0 ? 26 OG ? B SER 23 ? B SER 22 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 OP1 ? D DC 1 ? D DC 1 ? 1_555 172.1 ? 27 O1B ? G GDP . ? B GDP 1001 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 OP1 ? D DC 1 ? D DC 1 ? 1_555 96.3 ? 28 O ? J HOH . ? B HOH 1101 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 OP1 ? D DC 1 ? D DC 1 ? 1_555 92.8 ? 29 O ? J HOH . ? B HOH 1102 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 OP1 ? D DC 1 ? D DC 1 ? 1_555 88.7 ? 30 O ? J HOH . ? B HOH 1103 ? 1_555 MG ? H MG . ? B MG 1002 ? 1_555 OP1 ? D DC 1 ? D DC 1 ? 1_555 92.2 ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? C ? 2 ? D ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? parallel B 4 5 ? parallel C 1 2 ? parallel D 1 2 ? parallel D 2 3 ? parallel D 3 4 ? parallel D 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 MET A 2 ? PRO A 7 ? MET A 1 PRO A 6 A 2 VAL A 165 ? GLN A 170 ? VAL A 164 GLN A 169 B 1 VAL A 35 ? SER A 37 ? VAL A 34 SER A 36 B 2 THR A 76 ? ASP A 79 ? THR A 75 ASP A 78 B 3 SER A 10 ? ILE A 15 ? SER A 9 ILE A 14 B 4 PHE A 101 ? PHE A 107 ? PHE A 100 PHE A 106 B 5 TYR A 152 ? LEU A 156 ? TYR A 151 LEU A 155 C 1 MET B 2 ? PRO B 7 ? MET B 1 PRO B 6 C 2 VAL B 165 ? GLN B 170 ? VAL B 164 GLN B 169 D 1 VAL B 35 ? SER B 37 ? VAL B 34 SER B 36 D 2 THR B 76 ? ASP B 79 ? THR B 75 ASP B 78 D 3 SER B 10 ? ILE B 15 ? SER B 9 ILE B 14 D 4 PHE B 101 ? PHE B 107 ? PHE B 100 PHE B 106 D 5 TYR B 152 ? LEU B 156 ? TYR B 151 LEU B 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 4 ? N LEU A 3 O VAL A 166 ? O VAL A 165 B 1 2 N ILE A 36 ? N ILE A 35 O VAL A 77 ? O VAL A 76 B 2 3 O VAL A 78 ? O VAL A 77 N VAL A 12 ? N VAL A 11 B 3 4 N VAL A 13 ? N VAL A 12 O VAL A 103 ? O VAL A 102 B 4 5 N VAL A 106 ? N VAL A 105 O TYR A 154 ? O TYR A 153 C 1 2 N LEU B 4 ? N LEU B 3 O VAL B 166 ? O VAL B 165 D 1 2 N ILE B 36 ? N ILE B 35 O VAL B 77 ? O VAL B 76 D 2 3 O VAL B 78 ? O VAL B 77 N VAL B 12 ? N VAL B 11 D 3 4 N VAL B 13 ? N VAL B 12 O VAL B 103 ? O VAL B 102 D 4 5 N VAL B 106 ? N VAL B 105 O TYR B 154 ? O TYR B 153 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GDP 1001 ? 20 'BINDING SITE FOR RESIDUE GDP A 1001' AC2 Software A MG 1002 ? 7 'BINDING SITE FOR RESIDUE MG A 1002' AC3 Software B GDP 1001 ? 18 'BINDING SITE FOR RESIDUE GDP B 1001' AC4 Software B MG 1002 ? 7 'BINDING SITE FOR RESIDUE MG B 1002' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 20 SER A 17 ? SER A 16 . ? 1_555 ? 2 AC1 20 GLY A 19 ? GLY A 18 . ? 1_555 ? 3 AC1 20 SER A 20 ? SER A 19 . ? 1_555 ? 4 AC1 20 GLY A 21 ? GLY A 20 . ? 1_555 ? 5 AC1 20 LYS A 22 ? LYS A 21 . ? 1_555 ? 6 AC1 20 SER A 23 ? SER A 22 . ? 1_555 ? 7 AC1 20 THR A 24 ? THR A 23 . ? 1_555 ? 8 AC1 20 ARG A 117 ? ARG A 116 . ? 1_555 ? 9 AC1 20 ARG A 121 ? ARG A 120 . ? 1_555 ? 10 AC1 20 ARG A 124 ? ARG A 123 . ? 1_555 ? 11 AC1 20 MG F . ? MG A 1002 . ? 1_555 ? 12 AC1 20 HOH I . ? HOH A 1101 . ? 1_555 ? 13 AC1 20 HOH I . ? HOH A 1103 . ? 1_555 ? 14 AC1 20 HOH I . ? HOH A 1184 . ? 1_555 ? 15 AC1 20 HOH I . ? HOH A 1191 . ? 1_555 ? 16 AC1 20 HOH I . ? HOH A 1214 . ? 1_555 ? 17 AC1 20 HOH I . ? HOH A 1226 . ? 1_555 ? 18 AC1 20 HOH I . ? HOH A 1259 . ? 1_555 ? 19 AC1 20 LYS B 119 ? LYS B 118 . ? 3_444 ? 20 AC1 20 DC C 1 ? DC C 1 . ? 1_555 ? 21 AC2 7 SER A 23 ? SER A 22 . ? 1_555 ? 22 AC2 7 ARG A 124 ? ARG A 123 . ? 1_555 ? 23 AC2 7 GDP E . ? GDP A 1001 . ? 1_555 ? 24 AC2 7 HOH I . ? HOH A 1101 . ? 1_555 ? 25 AC2 7 HOH I . ? HOH A 1102 . ? 1_555 ? 26 AC2 7 HOH I . ? HOH A 1103 . ? 1_555 ? 27 AC2 7 DC C 1 ? DC C 1 . ? 1_555 ? 28 AC3 18 SER B 17 ? SER B 16 . ? 1_555 ? 29 AC3 18 GLY B 19 ? GLY B 18 . ? 1_555 ? 30 AC3 18 SER B 20 ? SER B 19 . ? 1_555 ? 31 AC3 18 GLY B 21 ? GLY B 20 . ? 1_555 ? 32 AC3 18 LYS B 22 ? LYS B 21 . ? 1_555 ? 33 AC3 18 SER B 23 ? SER B 22 . ? 1_555 ? 34 AC3 18 THR B 24 ? THR B 23 . ? 1_555 ? 35 AC3 18 ARG B 117 ? ARG B 116 . ? 1_555 ? 36 AC3 18 ARG B 121 ? ARG B 120 . ? 1_555 ? 37 AC3 18 MG H . ? MG B 1002 . ? 1_555 ? 38 AC3 18 HOH J . ? HOH B 1101 . ? 1_555 ? 39 AC3 18 HOH J . ? HOH B 1103 . ? 1_555 ? 40 AC3 18 HOH J . ? HOH B 1149 . ? 1_555 ? 41 AC3 18 HOH J . ? HOH B 1189 . ? 1_555 ? 42 AC3 18 HOH J . ? HOH B 1200 . ? 1_555 ? 43 AC3 18 HOH J . ? HOH B 1222 . ? 1_555 ? 44 AC3 18 HOH J . ? HOH B 1248 . ? 1_555 ? 45 AC3 18 DC D 1 ? DC D 1 . ? 1_555 ? 46 AC4 7 SER B 23 ? SER B 22 . ? 1_555 ? 47 AC4 7 ARG B 124 ? ARG B 123 . ? 1_555 ? 48 AC4 7 GDP G . ? GDP B 1001 . ? 1_555 ? 49 AC4 7 HOH J . ? HOH B 1101 . ? 1_555 ? 50 AC4 7 HOH J . ? HOH B 1102 . ? 1_555 ? 51 AC4 7 HOH J . ? HOH B 1103 . ? 1_555 ? 52 AC4 7 DC D 1 ? DC D 1 . ? 1_555 ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O B HOH 1198 ? ? O B HOH 1228 ? ? 2.16 2 1 O A HOH 1241 ? ? O A HOH 1266 ? ? 2.17 3 1 O A HOH 1196 ? ? O A HOH 1251 ? ? 2.18 4 1 O A HOH 1221 ? ? O A HOH 1231 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 P C DC 1 ? ? OP3 C DC 1 ? ? 1.474 1.607 -0.133 0.012 N 2 1 P D DC 1 ? ? OP3 D DC 1 ? ? 1.487 1.607 -0.120 0.012 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 "O4'" _pdbx_validate_rmsd_angle.auth_asym_id_1 D _pdbx_validate_rmsd_angle.auth_comp_id_1 DC _pdbx_validate_rmsd_angle.auth_seq_id_1 1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 "C1'" _pdbx_validate_rmsd_angle.auth_asym_id_2 D _pdbx_validate_rmsd_angle.auth_comp_id_2 DC _pdbx_validate_rmsd_angle.auth_seq_id_2 1 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 N1 _pdbx_validate_rmsd_angle.auth_asym_id_3 D _pdbx_validate_rmsd_angle.auth_comp_id_3 DC _pdbx_validate_rmsd_angle.auth_seq_id_3 1 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 110.40 _pdbx_validate_rmsd_angle.angle_target_value 108.30 _pdbx_validate_rmsd_angle.angle_deviation 2.10 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.30 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 46 ? ? 76.40 -6.53 2 1 ASP A 122 ? ? -112.97 -145.79 3 1 ASP B 46 ? ? 77.08 -8.48 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DC OP3 O N N 88 DC P P N N 89 DC OP1 O N N 90 DC OP2 O N N 91 DC "O5'" O N N 92 DC "C5'" C N N 93 DC "C4'" C N R 94 DC "O4'" O N N 95 DC "C3'" C N S 96 DC "O3'" O N N 97 DC "C2'" C N N 98 DC "C1'" C N R 99 DC N1 N N N 100 DC C2 C N N 101 DC O2 O N N 102 DC N3 N N N 103 DC C4 C N N 104 DC N4 N N N 105 DC C5 C N N 106 DC C6 C N N 107 DC HOP3 H N N 108 DC HOP2 H N N 109 DC "H5'" H N N 110 DC "H5''" H N N 111 DC "H4'" H N N 112 DC "H3'" H N N 113 DC "HO3'" H N N 114 DC "H2'" H N N 115 DC "H2''" H N N 116 DC "H1'" H N N 117 DC H41 H N N 118 DC H42 H N N 119 DC H5 H N N 120 DC H6 H N N 121 DG OP3 O N N 122 DG P P N N 123 DG OP1 O N N 124 DG OP2 O N N 125 DG "O5'" O N N 126 DG "C5'" C N N 127 DG "C4'" C N R 128 DG "O4'" O N N 129 DG "C3'" C N S 130 DG "O3'" O N N 131 DG "C2'" C N N 132 DG "C1'" C N R 133 DG N9 N Y N 134 DG C8 C Y N 135 DG N7 N Y N 136 DG C5 C Y N 137 DG C6 C N N 138 DG O6 O N N 139 DG N1 N N N 140 DG C2 C N N 141 DG N2 N N N 142 DG N3 N N N 143 DG C4 C Y N 144 DG HOP3 H N N 145 DG HOP2 H N N 146 DG "H5'" H N N 147 DG "H5''" H N N 148 DG "H4'" H N N 149 DG "H3'" H N N 150 DG "HO3'" H N N 151 DG "H2'" H N N 152 DG "H2''" H N N 153 DG "H1'" H N N 154 DG H8 H N N 155 DG H1 H N N 156 DG H21 H N N 157 DG H22 H N N 158 DT OP3 O N N 159 DT P P N N 160 DT OP1 O N N 161 DT OP2 O N N 162 DT "O5'" O N N 163 DT "C5'" C N N 164 DT "C4'" C N R 165 DT "O4'" O N N 166 DT "C3'" C N S 167 DT "O3'" O N N 168 DT "C2'" C N N 169 DT "C1'" C N R 170 DT N1 N N N 171 DT C2 C N N 172 DT O2 O N N 173 DT N3 N N N 174 DT C4 C N N 175 DT O4 O N N 176 DT C5 C N N 177 DT C7 C N N 178 DT C6 C N N 179 DT HOP3 H N N 180 DT HOP2 H N N 181 DT "H5'" H N N 182 DT "H5''" H N N 183 DT "H4'" H N N 184 DT "H3'" H N N 185 DT "HO3'" H N N 186 DT "H2'" H N N 187 DT "H2''" H N N 188 DT "H1'" H N N 189 DT H3 H N N 190 DT H71 H N N 191 DT H72 H N N 192 DT H73 H N N 193 DT H6 H N N 194 GDP PB P N N 195 GDP O1B O N N 196 GDP O2B O N N 197 GDP O3B O N N 198 GDP O3A O N N 199 GDP PA P N N 200 GDP O1A O N N 201 GDP O2A O N N 202 GDP "O5'" O N N 203 GDP "C5'" C N N 204 GDP "C4'" C N R 205 GDP "O4'" O N N 206 GDP "C3'" C N S 207 GDP "O3'" O N N 208 GDP "C2'" C N R 209 GDP "O2'" O N N 210 GDP "C1'" C N R 211 GDP N9 N Y N 212 GDP C8 C Y N 213 GDP N7 N Y N 214 GDP C5 C Y N 215 GDP C6 C N N 216 GDP O6 O N N 217 GDP N1 N N N 218 GDP C2 C N N 219 GDP N2 N N N 220 GDP N3 N N N 221 GDP C4 C Y N 222 GDP HOB2 H N N 223 GDP HOB3 H N N 224 GDP HOA2 H N N 225 GDP "H5'" H N N 226 GDP "H5''" H N N 227 GDP "H4'" H N N 228 GDP "H3'" H N N 229 GDP "HO3'" H N N 230 GDP "H2'" H N N 231 GDP "HO2'" H N N 232 GDP "H1'" H N N 233 GDP H8 H N N 234 GDP HN1 H N N 235 GDP HN21 H N N 236 GDP HN22 H N N 237 GLN N N N N 238 GLN CA C N S 239 GLN C C N N 240 GLN O O N N 241 GLN CB C N N 242 GLN CG C N N 243 GLN CD C N N 244 GLN OE1 O N N 245 GLN NE2 N N N 246 GLN OXT O N N 247 GLN H H N N 248 GLN H2 H N N 249 GLN HA H N N 250 GLN HB2 H N N 251 GLN HB3 H N N 252 GLN HG2 H N N 253 GLN HG3 H N N 254 GLN HE21 H N N 255 GLN HE22 H N N 256 GLN HXT H N N 257 GLU N N N N 258 GLU CA C N S 259 GLU C C N N 260 GLU O O N N 261 GLU CB C N N 262 GLU CG C N N 263 GLU CD C N N 264 GLU OE1 O N N 265 GLU OE2 O N N 266 GLU OXT O N N 267 GLU H H N N 268 GLU H2 H N N 269 GLU HA H N N 270 GLU HB2 H N N 271 GLU HB3 H N N 272 GLU HG2 H N N 273 GLU HG3 H N N 274 GLU HE2 H N N 275 GLU HXT H N N 276 GLY N N N N 277 GLY CA C N N 278 GLY C C N N 279 GLY O O N N 280 GLY OXT O N N 281 GLY H H N N 282 GLY H2 H N N 283 GLY HA2 H N N 284 GLY HA3 H N N 285 GLY HXT H N N 286 HIS N N N N 287 HIS CA C N S 288 HIS C C N N 289 HIS O O N N 290 HIS CB C N N 291 HIS CG C Y N 292 HIS ND1 N Y N 293 HIS CD2 C Y N 294 HIS CE1 C Y N 295 HIS NE2 N Y N 296 HIS OXT O N N 297 HIS H H N N 298 HIS H2 H N N 299 HIS HA H N N 300 HIS HB2 H N N 301 HIS HB3 H N N 302 HIS HD1 H N N 303 HIS HD2 H N N 304 HIS HE1 H N N 305 HIS HE2 H N N 306 HIS HXT H N N 307 HOH O O N N 308 HOH H1 H N N 309 HOH H2 H N N 310 ILE N N N N 311 ILE CA C N S 312 ILE C C N N 313 ILE O O N N 314 ILE CB C N S 315 ILE CG1 C N N 316 ILE CG2 C N N 317 ILE CD1 C N N 318 ILE OXT O N N 319 ILE H H N N 320 ILE H2 H N N 321 ILE HA H N N 322 ILE HB H N N 323 ILE HG12 H N N 324 ILE HG13 H N N 325 ILE HG21 H N N 326 ILE HG22 H N N 327 ILE HG23 H N N 328 ILE HD11 H N N 329 ILE HD12 H N N 330 ILE HD13 H N N 331 ILE HXT H N N 332 LEU N N N N 333 LEU CA C N S 334 LEU C C N N 335 LEU O O N N 336 LEU CB C N N 337 LEU CG C N N 338 LEU CD1 C N N 339 LEU CD2 C N N 340 LEU OXT O N N 341 LEU H H N N 342 LEU H2 H N N 343 LEU HA H N N 344 LEU HB2 H N N 345 LEU HB3 H N N 346 LEU HG H N N 347 LEU HD11 H N N 348 LEU HD12 H N N 349 LEU HD13 H N N 350 LEU HD21 H N N 351 LEU HD22 H N N 352 LEU HD23 H N N 353 LEU HXT H N N 354 LYS N N N N 355 LYS CA C N S 356 LYS C C N N 357 LYS O O N N 358 LYS CB C N N 359 LYS CG C N N 360 LYS CD C N N 361 LYS CE C N N 362 LYS NZ N N N 363 LYS OXT O N N 364 LYS H H N N 365 LYS H2 H N N 366 LYS HA H N N 367 LYS HB2 H N N 368 LYS HB3 H N N 369 LYS HG2 H N N 370 LYS HG3 H N N 371 LYS HD2 H N N 372 LYS HD3 H N N 373 LYS HE2 H N N 374 LYS HE3 H N N 375 LYS HZ1 H N N 376 LYS HZ2 H N N 377 LYS HZ3 H N N 378 LYS HXT H N N 379 MET N N N N 380 MET CA C N S 381 MET C C N N 382 MET O O N N 383 MET CB C N N 384 MET CG C N N 385 MET SD S N N 386 MET CE C N N 387 MET OXT O N N 388 MET H H N N 389 MET H2 H N N 390 MET HA H N N 391 MET HB2 H N N 392 MET HB3 H N N 393 MET HG2 H N N 394 MET HG3 H N N 395 MET HE1 H N N 396 MET HE2 H N N 397 MET HE3 H N N 398 MET HXT H N N 399 MG MG MG N N 400 PHE N N N N 401 PHE CA C N S 402 PHE C C N N 403 PHE O O N N 404 PHE CB C N N 405 PHE CG C Y N 406 PHE CD1 C Y N 407 PHE CD2 C Y N 408 PHE CE1 C Y N 409 PHE CE2 C Y N 410 PHE CZ C Y N 411 PHE OXT O N N 412 PHE H H N N 413 PHE H2 H N N 414 PHE HA H N N 415 PHE HB2 H N N 416 PHE HB3 H N N 417 PHE HD1 H N N 418 PHE HD2 H N N 419 PHE HE1 H N N 420 PHE HE2 H N N 421 PHE HZ H N N 422 PHE HXT H N N 423 PRO N N N N 424 PRO CA C N S 425 PRO C C N N 426 PRO O O N N 427 PRO CB C N N 428 PRO CG C N N 429 PRO CD C N N 430 PRO OXT O N N 431 PRO H H N N 432 PRO HA H N N 433 PRO HB2 H N N 434 PRO HB3 H N N 435 PRO HG2 H N N 436 PRO HG3 H N N 437 PRO HD2 H N N 438 PRO HD3 H N N 439 PRO HXT H N N 440 SER N N N N 441 SER CA C N S 442 SER C C N N 443 SER O O N N 444 SER CB C N N 445 SER OG O N N 446 SER OXT O N N 447 SER H H N N 448 SER H2 H N N 449 SER HA H N N 450 SER HB2 H N N 451 SER HB3 H N N 452 SER HG H N N 453 SER HXT H N N 454 THR N N N N 455 THR CA C N S 456 THR C C N N 457 THR O O N N 458 THR CB C N R 459 THR OG1 O N N 460 THR CG2 C N N 461 THR OXT O N N 462 THR H H N N 463 THR H2 H N N 464 THR HA H N N 465 THR HB H N N 466 THR HG1 H N N 467 THR HG21 H N N 468 THR HG22 H N N 469 THR HG23 H N N 470 THR HXT H N N 471 TYR N N N N 472 TYR CA C N S 473 TYR C C N N 474 TYR O O N N 475 TYR CB C N N 476 TYR CG C Y N 477 TYR CD1 C Y N 478 TYR CD2 C Y N 479 TYR CE1 C Y N 480 TYR CE2 C Y N 481 TYR CZ C Y N 482 TYR OH O N N 483 TYR OXT O N N 484 TYR H H N N 485 TYR H2 H N N 486 TYR HA H N N 487 TYR HB2 H N N 488 TYR HB3 H N N 489 TYR HD1 H N N 490 TYR HD2 H N N 491 TYR HE1 H N N 492 TYR HE2 H N N 493 TYR HH H N N 494 TYR HXT H N N 495 VAL N N N N 496 VAL CA C N S 497 VAL C C N N 498 VAL O O N N 499 VAL CB C N N 500 VAL CG1 C N N 501 VAL CG2 C N N 502 VAL OXT O N N 503 VAL H H N N 504 VAL H2 H N N 505 VAL HA H N N 506 VAL HB H N N 507 VAL HG11 H N N 508 VAL HG12 H N N 509 VAL HG13 H N N 510 VAL HG21 H N N 511 VAL HG22 H N N 512 VAL HG23 H N N 513 VAL HXT H N N 514 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DC OP3 P sing N N 83 DC OP3 HOP3 sing N N 84 DC P OP1 doub N N 85 DC P OP2 sing N N 86 DC P "O5'" sing N N 87 DC OP2 HOP2 sing N N 88 DC "O5'" "C5'" sing N N 89 DC "C5'" "C4'" sing N N 90 DC "C5'" "H5'" sing N N 91 DC "C5'" "H5''" sing N N 92 DC "C4'" "O4'" sing N N 93 DC "C4'" "C3'" sing N N 94 DC "C4'" "H4'" sing N N 95 DC "O4'" "C1'" sing N N 96 DC "C3'" "O3'" sing N N 97 DC "C3'" "C2'" sing N N 98 DC "C3'" "H3'" sing N N 99 DC "O3'" "HO3'" sing N N 100 DC "C2'" "C1'" sing N N 101 DC "C2'" "H2'" sing N N 102 DC "C2'" "H2''" sing N N 103 DC "C1'" N1 sing N N 104 DC "C1'" "H1'" sing N N 105 DC N1 C2 sing N N 106 DC N1 C6 sing N N 107 DC C2 O2 doub N N 108 DC C2 N3 sing N N 109 DC N3 C4 doub N N 110 DC C4 N4 sing N N 111 DC C4 C5 sing N N 112 DC N4 H41 sing N N 113 DC N4 H42 sing N N 114 DC C5 C6 doub N N 115 DC C5 H5 sing N N 116 DC C6 H6 sing N N 117 DG OP3 P sing N N 118 DG OP3 HOP3 sing N N 119 DG P OP1 doub N N 120 DG P OP2 sing N N 121 DG P "O5'" sing N N 122 DG OP2 HOP2 sing N N 123 DG "O5'" "C5'" sing N N 124 DG "C5'" "C4'" sing N N 125 DG "C5'" "H5'" sing N N 126 DG "C5'" "H5''" sing N N 127 DG "C4'" "O4'" sing N N 128 DG "C4'" "C3'" sing N N 129 DG "C4'" "H4'" sing N N 130 DG "O4'" "C1'" sing N N 131 DG "C3'" "O3'" sing N N 132 DG "C3'" "C2'" sing N N 133 DG "C3'" "H3'" sing N N 134 DG "O3'" "HO3'" sing N N 135 DG "C2'" "C1'" sing N N 136 DG "C2'" "H2'" sing N N 137 DG "C2'" "H2''" sing N N 138 DG "C1'" N9 sing N N 139 DG "C1'" "H1'" sing N N 140 DG N9 C8 sing Y N 141 DG N9 C4 sing Y N 142 DG C8 N7 doub Y N 143 DG C8 H8 sing N N 144 DG N7 C5 sing Y N 145 DG C5 C6 sing N N 146 DG C5 C4 doub Y N 147 DG C6 O6 doub N N 148 DG C6 N1 sing N N 149 DG N1 C2 sing N N 150 DG N1 H1 sing N N 151 DG C2 N2 sing N N 152 DG C2 N3 doub N N 153 DG N2 H21 sing N N 154 DG N2 H22 sing N N 155 DG N3 C4 sing N N 156 DT OP3 P sing N N 157 DT OP3 HOP3 sing N N 158 DT P OP1 doub N N 159 DT P OP2 sing N N 160 DT P "O5'" sing N N 161 DT OP2 HOP2 sing N N 162 DT "O5'" "C5'" sing N N 163 DT "C5'" "C4'" sing N N 164 DT "C5'" "H5'" sing N N 165 DT "C5'" "H5''" sing N N 166 DT "C4'" "O4'" sing N N 167 DT "C4'" "C3'" sing N N 168 DT "C4'" "H4'" sing N N 169 DT "O4'" "C1'" sing N N 170 DT "C3'" "O3'" sing N N 171 DT "C3'" "C2'" sing N N 172 DT "C3'" "H3'" sing N N 173 DT "O3'" "HO3'" sing N N 174 DT "C2'" "C1'" sing N N 175 DT "C2'" "H2'" sing N N 176 DT "C2'" "H2''" sing N N 177 DT "C1'" N1 sing N N 178 DT "C1'" "H1'" sing N N 179 DT N1 C2 sing N N 180 DT N1 C6 sing N N 181 DT C2 O2 doub N N 182 DT C2 N3 sing N N 183 DT N3 C4 sing N N 184 DT N3 H3 sing N N 185 DT C4 O4 doub N N 186 DT C4 C5 sing N N 187 DT C5 C7 sing N N 188 DT C5 C6 doub N N 189 DT C7 H71 sing N N 190 DT C7 H72 sing N N 191 DT C7 H73 sing N N 192 DT C6 H6 sing N N 193 GDP PB O1B doub N N 194 GDP PB O2B sing N N 195 GDP PB O3B sing N N 196 GDP PB O3A sing N N 197 GDP O2B HOB2 sing N N 198 GDP O3B HOB3 sing N N 199 GDP O3A PA sing N N 200 GDP PA O1A doub N N 201 GDP PA O2A sing N N 202 GDP PA "O5'" sing N N 203 GDP O2A HOA2 sing N N 204 GDP "O5'" "C5'" sing N N 205 GDP "C5'" "C4'" sing N N 206 GDP "C5'" "H5'" sing N N 207 GDP "C5'" "H5''" sing N N 208 GDP "C4'" "O4'" sing N N 209 GDP "C4'" "C3'" sing N N 210 GDP "C4'" "H4'" sing N N 211 GDP "O4'" "C1'" sing N N 212 GDP "C3'" "O3'" sing N N 213 GDP "C3'" "C2'" sing N N 214 GDP "C3'" "H3'" sing N N 215 GDP "O3'" "HO3'" sing N N 216 GDP "C2'" "O2'" sing N N 217 GDP "C2'" "C1'" sing N N 218 GDP "C2'" "H2'" sing N N 219 GDP "O2'" "HO2'" sing N N 220 GDP "C1'" N9 sing N N 221 GDP "C1'" "H1'" sing N N 222 GDP N9 C8 sing Y N 223 GDP N9 C4 sing Y N 224 GDP C8 N7 doub Y N 225 GDP C8 H8 sing N N 226 GDP N7 C5 sing Y N 227 GDP C5 C6 sing N N 228 GDP C5 C4 doub Y N 229 GDP C6 O6 doub N N 230 GDP C6 N1 sing N N 231 GDP N1 C2 sing N N 232 GDP N1 HN1 sing N N 233 GDP C2 N2 sing N N 234 GDP C2 N3 doub N N 235 GDP N2 HN21 sing N N 236 GDP N2 HN22 sing N N 237 GDP N3 C4 sing N N 238 GLN N CA sing N N 239 GLN N H sing N N 240 GLN N H2 sing N N 241 GLN CA C sing N N 242 GLN CA CB sing N N 243 GLN CA HA sing N N 244 GLN C O doub N N 245 GLN C OXT sing N N 246 GLN CB CG sing N N 247 GLN CB HB2 sing N N 248 GLN CB HB3 sing N N 249 GLN CG CD sing N N 250 GLN CG HG2 sing N N 251 GLN CG HG3 sing N N 252 GLN CD OE1 doub N N 253 GLN CD NE2 sing N N 254 GLN NE2 HE21 sing N N 255 GLN NE2 HE22 sing N N 256 GLN OXT HXT sing N N 257 GLU N CA sing N N 258 GLU N H sing N N 259 GLU N H2 sing N N 260 GLU CA C sing N N 261 GLU CA CB sing N N 262 GLU CA HA sing N N 263 GLU C O doub N N 264 GLU C OXT sing N N 265 GLU CB CG sing N N 266 GLU CB HB2 sing N N 267 GLU CB HB3 sing N N 268 GLU CG CD sing N N 269 GLU CG HG2 sing N N 270 GLU CG HG3 sing N N 271 GLU CD OE1 doub N N 272 GLU CD OE2 sing N N 273 GLU OE2 HE2 sing N N 274 GLU OXT HXT sing N N 275 GLY N CA sing N N 276 GLY N H sing N N 277 GLY N H2 sing N N 278 GLY CA C sing N N 279 GLY CA HA2 sing N N 280 GLY CA HA3 sing N N 281 GLY C O doub N N 282 GLY C OXT sing N N 283 GLY OXT HXT sing N N 284 HIS N CA sing N N 285 HIS N H sing N N 286 HIS N H2 sing N N 287 HIS CA C sing N N 288 HIS CA CB sing N N 289 HIS CA HA sing N N 290 HIS C O doub N N 291 HIS C OXT sing N N 292 HIS CB CG sing N N 293 HIS CB HB2 sing N N 294 HIS CB HB3 sing N N 295 HIS CG ND1 sing Y N 296 HIS CG CD2 doub Y N 297 HIS ND1 CE1 doub Y N 298 HIS ND1 HD1 sing N N 299 HIS CD2 NE2 sing Y N 300 HIS CD2 HD2 sing N N 301 HIS CE1 NE2 sing Y N 302 HIS CE1 HE1 sing N N 303 HIS NE2 HE2 sing N N 304 HIS OXT HXT sing N N 305 HOH O H1 sing N N 306 HOH O H2 sing N N 307 ILE N CA sing N N 308 ILE N H sing N N 309 ILE N H2 sing N N 310 ILE CA C sing N N 311 ILE CA CB sing N N 312 ILE CA HA sing N N 313 ILE C O doub N N 314 ILE C OXT sing N N 315 ILE CB CG1 sing N N 316 ILE CB CG2 sing N N 317 ILE CB HB sing N N 318 ILE CG1 CD1 sing N N 319 ILE CG1 HG12 sing N N 320 ILE CG1 HG13 sing N N 321 ILE CG2 HG21 sing N N 322 ILE CG2 HG22 sing N N 323 ILE CG2 HG23 sing N N 324 ILE CD1 HD11 sing N N 325 ILE CD1 HD12 sing N N 326 ILE CD1 HD13 sing N N 327 ILE OXT HXT sing N N 328 LEU N CA sing N N 329 LEU N H sing N N 330 LEU N H2 sing N N 331 LEU CA C sing N N 332 LEU CA CB sing N N 333 LEU CA HA sing N N 334 LEU C O doub N N 335 LEU C OXT sing N N 336 LEU CB CG sing N N 337 LEU CB HB2 sing N N 338 LEU CB HB3 sing N N 339 LEU CG CD1 sing N N 340 LEU CG CD2 sing N N 341 LEU CG HG sing N N 342 LEU CD1 HD11 sing N N 343 LEU CD1 HD12 sing N N 344 LEU CD1 HD13 sing N N 345 LEU CD2 HD21 sing N N 346 LEU CD2 HD22 sing N N 347 LEU CD2 HD23 sing N N 348 LEU OXT HXT sing N N 349 LYS N CA sing N N 350 LYS N H sing N N 351 LYS N H2 sing N N 352 LYS CA C sing N N 353 LYS CA CB sing N N 354 LYS CA HA sing N N 355 LYS C O doub N N 356 LYS C OXT sing N N 357 LYS CB CG sing N N 358 LYS CB HB2 sing N N 359 LYS CB HB3 sing N N 360 LYS CG CD sing N N 361 LYS CG HG2 sing N N 362 LYS CG HG3 sing N N 363 LYS CD CE sing N N 364 LYS CD HD2 sing N N 365 LYS CD HD3 sing N N 366 LYS CE NZ sing N N 367 LYS CE HE2 sing N N 368 LYS CE HE3 sing N N 369 LYS NZ HZ1 sing N N 370 LYS NZ HZ2 sing N N 371 LYS NZ HZ3 sing N N 372 LYS OXT HXT sing N N 373 MET N CA sing N N 374 MET N H sing N N 375 MET N H2 sing N N 376 MET CA C sing N N 377 MET CA CB sing N N 378 MET CA HA sing N N 379 MET C O doub N N 380 MET C OXT sing N N 381 MET CB CG sing N N 382 MET CB HB2 sing N N 383 MET CB HB3 sing N N 384 MET CG SD sing N N 385 MET CG HG2 sing N N 386 MET CG HG3 sing N N 387 MET SD CE sing N N 388 MET CE HE1 sing N N 389 MET CE HE2 sing N N 390 MET CE HE3 sing N N 391 MET OXT HXT sing N N 392 PHE N CA sing N N 393 PHE N H sing N N 394 PHE N H2 sing N N 395 PHE CA C sing N N 396 PHE CA CB sing N N 397 PHE CA HA sing N N 398 PHE C O doub N N 399 PHE C OXT sing N N 400 PHE CB CG sing N N 401 PHE CB HB2 sing N N 402 PHE CB HB3 sing N N 403 PHE CG CD1 doub Y N 404 PHE CG CD2 sing Y N 405 PHE CD1 CE1 sing Y N 406 PHE CD1 HD1 sing N N 407 PHE CD2 CE2 doub Y N 408 PHE CD2 HD2 sing N N 409 PHE CE1 CZ doub Y N 410 PHE CE1 HE1 sing N N 411 PHE CE2 CZ sing Y N 412 PHE CE2 HE2 sing N N 413 PHE CZ HZ sing N N 414 PHE OXT HXT sing N N 415 PRO N CA sing N N 416 PRO N CD sing N N 417 PRO N H sing N N 418 PRO CA C sing N N 419 PRO CA CB sing N N 420 PRO CA HA sing N N 421 PRO C O doub N N 422 PRO C OXT sing N N 423 PRO CB CG sing N N 424 PRO CB HB2 sing N N 425 PRO CB HB3 sing N N 426 PRO CG CD sing N N 427 PRO CG HG2 sing N N 428 PRO CG HG3 sing N N 429 PRO CD HD2 sing N N 430 PRO CD HD3 sing N N 431 PRO OXT HXT sing N N 432 SER N CA sing N N 433 SER N H sing N N 434 SER N H2 sing N N 435 SER CA C sing N N 436 SER CA CB sing N N 437 SER CA HA sing N N 438 SER C O doub N N 439 SER C OXT sing N N 440 SER CB OG sing N N 441 SER CB HB2 sing N N 442 SER CB HB3 sing N N 443 SER OG HG sing N N 444 SER OXT HXT sing N N 445 THR N CA sing N N 446 THR N H sing N N 447 THR N H2 sing N N 448 THR CA C sing N N 449 THR CA CB sing N N 450 THR CA HA sing N N 451 THR C O doub N N 452 THR C OXT sing N N 453 THR CB OG1 sing N N 454 THR CB CG2 sing N N 455 THR CB HB sing N N 456 THR OG1 HG1 sing N N 457 THR CG2 HG21 sing N N 458 THR CG2 HG22 sing N N 459 THR CG2 HG23 sing N N 460 THR OXT HXT sing N N 461 TYR N CA sing N N 462 TYR N H sing N N 463 TYR N H2 sing N N 464 TYR CA C sing N N 465 TYR CA CB sing N N 466 TYR CA HA sing N N 467 TYR C O doub N N 468 TYR C OXT sing N N 469 TYR CB CG sing N N 470 TYR CB HB2 sing N N 471 TYR CB HB3 sing N N 472 TYR CG CD1 doub Y N 473 TYR CG CD2 sing Y N 474 TYR CD1 CE1 sing Y N 475 TYR CD1 HD1 sing N N 476 TYR CD2 CE2 doub Y N 477 TYR CD2 HD2 sing N N 478 TYR CE1 CZ doub Y N 479 TYR CE1 HE1 sing N N 480 TYR CE2 CZ sing Y N 481 TYR CE2 HE2 sing N N 482 TYR CZ OH sing N N 483 TYR OH HH sing N N 484 TYR OXT HXT sing N N 485 VAL N CA sing N N 486 VAL N H sing N N 487 VAL N H2 sing N N 488 VAL CA C sing N N 489 VAL CA CB sing N N 490 VAL CA HA sing N N 491 VAL C O doub N N 492 VAL C OXT sing N N 493 VAL CB CG1 sing N N 494 VAL CB CG2 sing N N 495 VAL CB HB sing N N 496 VAL CG1 HG11 sing N N 497 VAL CG1 HG12 sing N N 498 VAL CG1 HG13 sing N N 499 VAL CG2 HG21 sing N N 500 VAL CG2 HG22 sing N N 501 VAL CG2 HG23 sing N N 502 VAL OXT HXT sing N N 503 # _atom_sites.entry_id 4MDE _atom_sites.fract_transf_matrix[1][1] 0.018369 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013676 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.008401 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_