data_4ME9 # _entry.id 4ME9 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ME9 pdb_00004me9 10.2210/pdb4me9/pdb RCSB RCSB081800 ? ? WWPDB D_1000081800 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-399377 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4ME9 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-08-25 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a transcriptional regulator, TetR family (BCE_2991) from Bacillus cereus ATCC 10987 at 2.50 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4ME9 _cell.length_a 73.540 _cell.length_b 73.540 _cell.length_c 96.280 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4ME9 _symmetry.Int_Tables_number 76 _symmetry.space_group_name_H-M 'P 41' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Transcriptional regulator, TetR family' 22017.357 2 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 3 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 4 water nat water 18.015 88 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;G(MSE)AKNKQEDIFDAA(MSE)QLFAERGYDGTTIP(MSE)IAEKAKVGAGTIYRYFENKEALVNSLFSKS(MSE)LQL SE(MSE)IKTDFPVEANIREQFSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFF(MSE)NIIEDGIV KGLLRPLPPVALIIIVYQPLEKLIKVIATGQLEYSKELVKELEESSWNAIRII ; _entity_poly.pdbx_seq_one_letter_code_can ;GMAKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSMLQLSEMIKTDFPVEANIRE QFSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFFMNIIEDGIVKGLLRPLPPVALIIIVYQPLEKLI KVIATGQLEYSKELVKELEESSWNAIRII ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier JCSG-399377 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 MSE n 1 3 ALA n 1 4 LYS n 1 5 ASN n 1 6 LYS n 1 7 GLN n 1 8 GLU n 1 9 ASP n 1 10 ILE n 1 11 PHE n 1 12 ASP n 1 13 ALA n 1 14 ALA n 1 15 MSE n 1 16 GLN n 1 17 LEU n 1 18 PHE n 1 19 ALA n 1 20 GLU n 1 21 ARG n 1 22 GLY n 1 23 TYR n 1 24 ASP n 1 25 GLY n 1 26 THR n 1 27 THR n 1 28 ILE n 1 29 PRO n 1 30 MSE n 1 31 ILE n 1 32 ALA n 1 33 GLU n 1 34 LYS n 1 35 ALA n 1 36 LYS n 1 37 VAL n 1 38 GLY n 1 39 ALA n 1 40 GLY n 1 41 THR n 1 42 ILE n 1 43 TYR n 1 44 ARG n 1 45 TYR n 1 46 PHE n 1 47 GLU n 1 48 ASN n 1 49 LYS n 1 50 GLU n 1 51 ALA n 1 52 LEU n 1 53 VAL n 1 54 ASN n 1 55 SER n 1 56 LEU n 1 57 PHE n 1 58 SER n 1 59 LYS n 1 60 SER n 1 61 MSE n 1 62 LEU n 1 63 GLN n 1 64 LEU n 1 65 SER n 1 66 GLU n 1 67 MSE n 1 68 ILE n 1 69 LYS n 1 70 THR n 1 71 ASP n 1 72 PHE n 1 73 PRO n 1 74 VAL n 1 75 GLU n 1 76 ALA n 1 77 ASN n 1 78 ILE n 1 79 ARG n 1 80 GLU n 1 81 GLN n 1 82 PHE n 1 83 SER n 1 84 HIS n 1 85 THR n 1 86 TYR n 1 87 ASN n 1 88 ARG n 1 89 LEU n 1 90 PHE n 1 91 GLU n 1 92 PHE n 1 93 ALA n 1 94 ARG n 1 95 ASN n 1 96 ASN n 1 97 VAL n 1 98 ASP n 1 99 ALA n 1 100 PHE n 1 101 LEU n 1 102 PHE n 1 103 THR n 1 104 ASN n 1 105 SER n 1 106 HIS n 1 107 CYS n 1 108 ASP n 1 109 SER n 1 110 TYR n 1 111 PHE n 1 112 LEU n 1 113 ASP n 1 114 GLU n 1 115 GLN n 1 116 SER n 1 117 LYS n 1 118 LYS n 1 119 ILE n 1 120 PHE n 1 121 ASP n 1 122 ASP n 1 123 PHE n 1 124 ILE n 1 125 GLY n 1 126 PHE n 1 127 PHE n 1 128 MSE n 1 129 ASN n 1 130 ILE n 1 131 ILE n 1 132 GLU n 1 133 ASP n 1 134 GLY n 1 135 ILE n 1 136 VAL n 1 137 LYS n 1 138 GLY n 1 139 LEU n 1 140 LEU n 1 141 ARG n 1 142 PRO n 1 143 LEU n 1 144 PRO n 1 145 PRO n 1 146 VAL n 1 147 ALA n 1 148 LEU n 1 149 ILE n 1 150 ILE n 1 151 ILE n 1 152 VAL n 1 153 TYR n 1 154 GLN n 1 155 PRO n 1 156 LEU n 1 157 GLU n 1 158 LYS n 1 159 LEU n 1 160 ILE n 1 161 LYS n 1 162 VAL n 1 163 ILE n 1 164 ALA n 1 165 THR n 1 166 GLY n 1 167 GLN n 1 168 LEU n 1 169 GLU n 1 170 TYR n 1 171 SER n 1 172 LYS n 1 173 GLU n 1 174 LEU n 1 175 VAL n 1 176 LYS n 1 177 GLU n 1 178 LEU n 1 179 GLU n 1 180 GLU n 1 181 SER n 1 182 SER n 1 183 TRP n 1 184 ASN n 1 185 ALA n 1 186 ILE n 1 187 ARG n 1 188 ILE n 1 189 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BCE_2991, NP_979294.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 10987' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus cereus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 222523 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain HK100 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q736B0_BACC1 _struct_ref.pdbx_db_accession Q736B0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MAKNKQEDIFDAAMQLFAERGYDGTTIPMIAEKAKVGAGTIYRYFENKEALVNSLFSKSMLQLSEMIKTDFPVEANIREQ FSHTYNRLFEFARNNVDAFLFTNSHCDSYFLDEQSKKIFDDFIGFFMNIIEDGIVKGLLRPLPPVALIIIVYQPLEKLIK VIATGQLEYSKELVKELEESSWNAIRII ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ME9 A 2 ? 189 ? Q736B0 1 ? 188 ? 1 188 2 1 4ME9 B 2 ? 189 ? Q736B0 1 ? 188 ? 1 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ME9 GLY A 1 ? UNP Q736B0 ? ? 'expression tag' 0 1 2 4ME9 GLY B 1 ? UNP Q736B0 ? ? 'expression tag' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4ME9 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.96 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 58.39 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details '0.4M KH2PO4, 1.6M NaH2PO4, 0.1M Phosphate Citrate pH 4.2, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH 4.2 # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-05-22 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97917 1.0 2 0.91837 1.0 3 0.97845 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength_list 0.97917,0.91837,0.97845 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.50 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 9.000 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs ? _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4ME9 _reflns.B_iso_Wilson_estimate ? _reflns.percent_possible_obs 98.400 _reflns.pdbx_Rsym_value 0.106 _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all 17497 _reflns.d_resolution_low 26.002 _reflns.pdbx_redundancy 3.600 _reflns.number_obs 17497 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.500 2.570 ? 4683 ? 0.850 1.6 0.850 ? 3.600 ? 1300 99.000 1 1 2.570 2.640 ? 4547 ? 0.660 2.0 0.660 ? 3.600 ? 1265 99.400 2 1 2.640 2.710 ? 4177 ? 0.545 2.4 0.545 ? 3.500 ? 1201 98.300 3 1 2.710 2.800 ? 3584 ? 0.465 2.6 0.465 ? 3.000 ? 1191 97.100 4 1 2.800 2.890 ? 3980 ? 0.348 3.5 0.348 ? 3.400 ? 1171 98.600 5 1 2.890 2.990 ? 4230 ? 0.292 4.4 0.292 ? 3.800 ? 1104 99.600 6 1 2.990 3.100 ? 4108 ? 0.235 5.4 0.235 ? 3.800 ? 1091 99.700 7 1 3.100 3.230 ? 3975 ? 0.194 6.4 0.194 ? 3.800 ? 1059 99.200 8 1 3.230 3.370 ? 3645 ? 0.147 7.9 0.147 ? 3.700 ? 982 98.700 9 1 3.370 3.540 ? 3532 ? 0.096 11.2 0.096 ? 3.700 ? 955 98.600 10 1 3.540 3.730 ? 3250 ? 0.088 12.2 0.088 ? 3.600 ? 902 98.400 11 1 3.730 3.950 ? 2761 ? 0.075 13.3 0.075 ? 3.300 ? 833 96.600 12 1 3.950 4.230 ? 2291 ? 0.058 14.7 0.058 ? 3.000 ? 767 94.400 13 1 4.230 4.560 ? 2925 ? 0.049 20.5 0.049 ? 3.800 ? 768 99.400 14 1 4.560 5.000 ? 2620 ? 0.051 19.4 0.051 ? 3.800 ? 693 99.700 15 1 5.000 5.590 ? 2416 ? 0.057 18.3 0.057 ? 3.800 ? 638 99.600 16 1 5.590 6.460 ? 1953 ? 0.065 15.3 0.065 ? 3.500 ? 559 98.000 17 1 6.460 7.910 ? 1431 ? 0.061 17.0 0.061 ? 3.200 ? 453 95.000 18 1 7.910 11.180 ? 1374 ? 0.039 28.0 0.039 ? 3.700 ? 367 98.500 19 1 11.180 26.002 ? 776 ? 0.040 29.1 0.040 ? 3.900 ? 198 92.100 20 1 # _refine.ls_percent_reflns_R_free 5.1200 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4ME9 _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML ? _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values ? _refine.aniso_B[3][3] 5.1243 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] -2.5621 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.2072 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii ? _refine.correlation_coeff_Fo_to_Fc 0.9246 _refine.ls_number_reflns_R_free 894 _refine.correlation_coeff_Fo_to_Fc_free 0.8967 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 98.2400 _refine.ls_R_factor_R_work 0.2054 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.5000 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 19.380 _refine.occupancy_min 0.500 _refine.B_iso_mean 55.7874 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] -2.5621 _refine.B_iso_max 153.270 _refine.ls_d_res_low 26.002 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details ? _refine.aniso_B[1][2] 0.0000 _refine.ls_R_factor_R_free 0.2430 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 17458 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. ZERO OCCUPANCY HYDROGENS WERE INCLUDED DURING REFINEMENT TO IMPROVE THE ANTI-BUMPING RESTRAINTS. 2. ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B FACTORS. ANISOU RECORDS CONTAIN SUM OF TLS AND RESIDUAL U FACTORS. 3. WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. 4. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 5. CHLORIDE (CL) AND PHOSPHATE (PO4) MOLECULE FROM THE PURIFICATION AND CRYSTALLIZATION SOLUTION ARE MODELED. 6. NCS RESTRAINTS WERE APPLIED DURING REFINEMENT USING LSSR (-AUTONCS) IN BUSTER. 7. MAD PHASE RESTRAINTS WERE USED DURING REFINEMENT. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4ME9 _refine_analyze.Luzzati_coordinate_error_obs 0.365 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2947 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 88 _refine_hist.number_atoms_total 3041 _refine_hist.d_res_high 2.5000 _refine_hist.d_res_low 26.002 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 1667 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 84 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 856 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 5928 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd 0 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 413 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 6311 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 5928 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 10721 0.930 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 2.670 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 3.040 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.5000 _refine_ls_shell.d_res_low 2.6500 _refine_ls_shell.pdbx_total_number_of_bins_used 9 _refine_ls_shell.percent_reflns_obs 98.2400 _refine_ls_shell.number_reflns_R_work 2668 _refine_ls_shell.R_factor_all 0.2149 _refine_ls_shell.R_factor_R_work 0.2126 _refine_ls_shell.R_factor_R_free 0.2540 _refine_ls_shell.percent_reflns_R_free 5.4200 _refine_ls_shell.number_reflns_R_free 153 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2821 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4ME9 _struct.title 'Crystal structure of a transcriptional regulator, TetR family (BCE_2991) from Bacillus cereus ATCC 10987 at 2.50 A resolution' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords 'Transcription regulator' _struct_keywords.text ;TetR_N domain, PF00440 family, tetracyclin repressor-like, C-terminal domain fold, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, TRANSCRIPTION DNA BINDING PROTEIN, Transcription regulator ; _struct_keywords.entry_id 4ME9 # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 4 ? F N N 4 ? # _struct_biol.id 1 _struct_biol.details 'CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A DIMER AS THE SIGNIFICANT OLIGOMERIZATION STATE.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 LYS A 6 ? GLY A 22 ? LYS A 5 GLY A 21 1 ? 17 HELX_P HELX_P2 2 THR A 27 ? LYS A 36 ? THR A 26 LYS A 35 1 ? 10 HELX_P HELX_P3 3 GLY A 38 ? PHE A 46 ? GLY A 37 PHE A 45 1 ? 9 HELX_P HELX_P4 4 ASN A 48 ? THR A 70 ? ASN A 47 THR A 69 1 ? 23 HELX_P HELX_P5 5 ASN A 77 ? ASN A 96 ? ASN A 76 ASN A 95 1 ? 20 HELX_P HELX_P6 6 ASN A 96 ? HIS A 106 ? ASN A 95 HIS A 105 1 ? 11 HELX_P HELX_P7 7 ASP A 113 ? LYS A 137 ? ASP A 112 LYS A 136 1 ? 25 HELX_P HELX_P8 8 PRO A 144 ? THR A 165 ? PRO A 143 THR A 164 1 ? 22 HELX_P HELX_P9 9 SER A 171 ? ARG A 187 ? SER A 170 ARG A 186 1 ? 17 HELX_P HELX_P10 10 ASN B 5 ? GLY B 22 ? ASN B 4 GLY B 21 1 ? 18 HELX_P HELX_P11 11 THR B 27 ? LYS B 36 ? THR B 26 LYS B 35 1 ? 10 HELX_P HELX_P12 12 GLY B 38 ? PHE B 46 ? GLY B 37 PHE B 45 1 ? 9 HELX_P HELX_P13 13 ASN B 48 ? THR B 70 ? ASN B 47 THR B 69 1 ? 23 HELX_P HELX_P14 14 ASN B 77 ? ASN B 96 ? ASN B 76 ASN B 95 1 ? 20 HELX_P HELX_P15 15 ASN B 96 ? HIS B 106 ? ASN B 95 HIS B 105 1 ? 11 HELX_P HELX_P16 16 ASP B 113 ? LYS B 137 ? ASP B 112 LYS B 136 1 ? 25 HELX_P HELX_P17 17 PRO B 144 ? THR B 165 ? PRO B 143 THR B 164 1 ? 22 HELX_P HELX_P18 18 SER B 171 ? ARG B 187 ? SER B 170 ARG B 186 1 ? 17 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A MSE 2 C ? ? ? 1_555 A ALA 3 N ? ? A MSE 1 A ALA 2 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale2 covale both ? A ALA 14 C ? ? ? 1_555 A MSE 15 N ? ? A ALA 13 A MSE 14 1_555 ? ? ? ? ? ? ? 1.333 ? ? covale3 covale both ? A MSE 15 C ? ? ? 1_555 A GLN 16 N ? ? A MSE 14 A GLN 15 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale4 covale both ? A PRO 29 C ? ? ? 1_555 A MSE 30 N ? ? A PRO 28 A MSE 29 1_555 ? ? ? ? ? ? ? 1.349 ? ? covale5 covale both ? A MSE 30 C ? ? ? 1_555 A ILE 31 N ? ? A MSE 29 A ILE 30 1_555 ? ? ? ? ? ? ? 1.352 ? ? covale6 covale both ? A SER 60 C ? ? ? 1_555 A MSE 61 N ? ? A SER 59 A MSE 60 1_555 ? ? ? ? ? ? ? 1.346 ? ? covale7 covale both ? A MSE 61 C ? ? ? 1_555 A LEU 62 N ? ? A MSE 60 A LEU 61 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale8 covale both ? A GLU 66 C ? ? ? 1_555 A MSE 67 N ? ? A GLU 65 A MSE 66 1_555 ? ? ? ? ? ? ? 1.325 ? ? covale9 covale both ? A MSE 67 C ? ? ? 1_555 A ILE 68 N ? ? A MSE 66 A ILE 67 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale10 covale both ? A PHE 127 C ? ? ? 1_555 A MSE 128 N ? ? A PHE 126 A MSE 127 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale11 covale both ? A MSE 128 C ? ? ? 1_555 A ASN 129 N ? ? A MSE 127 A ASN 128 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale12 covale both ? B ALA 14 C ? ? ? 1_555 B MSE 15 N ? ? B ALA 13 B MSE 14 1_555 ? ? ? ? ? ? ? 1.351 ? ? covale13 covale both ? B MSE 15 C ? ? ? 1_555 B GLN 16 N ? ? B MSE 14 B GLN 15 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale14 covale both ? B PRO 29 C ? ? ? 1_555 B MSE 30 N ? ? B PRO 28 B MSE 29 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale15 covale both ? B MSE 30 C ? ? ? 1_555 B ILE 31 N ? ? B MSE 29 B ILE 30 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale16 covale both ? B SER 60 C ? ? ? 1_555 B MSE 61 N ? ? B SER 59 B MSE 60 1_555 ? ? ? ? ? ? ? 1.342 ? ? covale17 covale both ? B MSE 61 C ? ? ? 1_555 B LEU 62 N ? ? B MSE 60 B LEU 61 1_555 ? ? ? ? ? ? ? 1.323 ? ? covale18 covale both ? B GLU 66 C ? ? ? 1_555 B MSE 67 N ? ? B GLU 65 B MSE 66 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale19 covale both ? B MSE 67 C ? ? ? 1_555 B ILE 68 N ? ? B MSE 66 B ILE 67 1_555 ? ? ? ? ? ? ? 1.322 ? ? covale20 covale both ? B PHE 127 C ? ? ? 1_555 B MSE 128 N ? ? B PHE 126 B MSE 127 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale21 covale both ? B MSE 128 C ? ? ? 1_555 B ASN 129 N ? ? B MSE 127 B ASN 128 1_555 ? ? ? ? ? ? ? 1.339 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 1 'BINDING SITE FOR RESIDUE CL A 201' AC2 Software B PO4 200 ? 5 'BINDING SITE FOR RESIDUE PO4 B 200' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 1 HIS A 106 ? HIS A 105 . ? 1_555 ? 2 AC2 5 GLN A 154 ? GLN A 153 . ? 1_555 ? 3 AC2 5 GLU A 157 ? GLU A 156 . ? 1_555 ? 4 AC2 5 GLN B 154 ? GLN B 153 . ? 1_555 ? 5 AC2 5 GLU B 157 ? GLU B 156 . ? 1_555 ? 6 AC2 5 LYS B 161 ? LYS B 160 . ? 1_555 ? # _atom_sites.entry_id 4ME9 _atom_sites.fract_transf_matrix[1][1] 0.013598 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013598 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010386 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 MSE 2 1 1 MSE MSE A . n A 1 3 ALA 3 2 2 ALA ALA A . n A 1 4 LYS 4 3 3 LYS LYS A . n A 1 5 ASN 5 4 4 ASN ASN A . n A 1 6 LYS 6 5 5 LYS LYS A . n A 1 7 GLN 7 6 6 GLN GLN A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 ASP 9 8 8 ASP ASP A . n A 1 10 ILE 10 9 9 ILE ILE A . n A 1 11 PHE 11 10 10 PHE PHE A . n A 1 12 ASP 12 11 11 ASP ASP A . n A 1 13 ALA 13 12 12 ALA ALA A . n A 1 14 ALA 14 13 13 ALA ALA A . n A 1 15 MSE 15 14 14 MSE MSE A . n A 1 16 GLN 16 15 15 GLN GLN A . n A 1 17 LEU 17 16 16 LEU LEU A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 ALA 19 18 18 ALA ALA A . n A 1 20 GLU 20 19 19 GLU GLU A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 GLY 22 21 21 GLY GLY A . n A 1 23 TYR 23 22 22 TYR TYR A . n A 1 24 ASP 24 23 23 ASP ASP A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 THR 26 25 25 THR THR A . n A 1 27 THR 27 26 26 THR THR A . n A 1 28 ILE 28 27 27 ILE ILE A . n A 1 29 PRO 29 28 28 PRO PRO A . n A 1 30 MSE 30 29 29 MSE MSE A . n A 1 31 ILE 31 30 30 ILE ILE A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 GLU 33 32 32 GLU GLU A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 ALA 35 34 34 ALA ALA A . n A 1 36 LYS 36 35 35 LYS LYS A . n A 1 37 VAL 37 36 36 VAL VAL A . n A 1 38 GLY 38 37 37 GLY GLY A . n A 1 39 ALA 39 38 38 ALA ALA A . n A 1 40 GLY 40 39 39 GLY GLY A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 ILE 42 41 41 ILE ILE A . n A 1 43 TYR 43 42 42 TYR TYR A . n A 1 44 ARG 44 43 43 ARG ARG A . n A 1 45 TYR 45 44 44 TYR TYR A . n A 1 46 PHE 46 45 45 PHE PHE A . n A 1 47 GLU 47 46 46 GLU GLU A . n A 1 48 ASN 48 47 47 ASN ASN A . n A 1 49 LYS 49 48 48 LYS LYS A . n A 1 50 GLU 50 49 49 GLU GLU A . n A 1 51 ALA 51 50 50 ALA ALA A . n A 1 52 LEU 52 51 51 LEU LEU A . n A 1 53 VAL 53 52 52 VAL VAL A . n A 1 54 ASN 54 53 53 ASN ASN A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 PHE 57 56 56 PHE PHE A . n A 1 58 SER 58 57 57 SER SER A . n A 1 59 LYS 59 58 58 LYS LYS A . n A 1 60 SER 60 59 59 SER SER A . n A 1 61 MSE 61 60 60 MSE MSE A . n A 1 62 LEU 62 61 61 LEU LEU A . n A 1 63 GLN 63 62 62 GLN GLN A . n A 1 64 LEU 64 63 63 LEU LEU A . n A 1 65 SER 65 64 64 SER SER A . n A 1 66 GLU 66 65 65 GLU GLU A . n A 1 67 MSE 67 66 66 MSE MSE A . n A 1 68 ILE 68 67 67 ILE ILE A . n A 1 69 LYS 69 68 68 LYS LYS A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 ASP 71 70 70 ASP ASP A . n A 1 72 PHE 72 71 71 PHE PHE A . n A 1 73 PRO 73 72 72 PRO PRO A . n A 1 74 VAL 74 73 73 VAL VAL A . n A 1 75 GLU 75 74 74 GLU GLU A . n A 1 76 ALA 76 75 75 ALA ALA A . n A 1 77 ASN 77 76 76 ASN ASN A . n A 1 78 ILE 78 77 77 ILE ILE A . n A 1 79 ARG 79 78 78 ARG ARG A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 GLN 81 80 80 GLN GLN A . n A 1 82 PHE 82 81 81 PHE PHE A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 HIS 84 83 83 HIS HIS A . n A 1 85 THR 85 84 84 THR THR A . n A 1 86 TYR 86 85 85 TYR TYR A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 ARG 88 87 87 ARG ARG A . n A 1 89 LEU 89 88 88 LEU LEU A . n A 1 90 PHE 90 89 89 PHE PHE A . n A 1 91 GLU 91 90 90 GLU GLU A . n A 1 92 PHE 92 91 91 PHE PHE A . n A 1 93 ALA 93 92 92 ALA ALA A . n A 1 94 ARG 94 93 93 ARG ARG A . n A 1 95 ASN 95 94 94 ASN ASN A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 VAL 97 96 96 VAL VAL A . n A 1 98 ASP 98 97 97 ASP ASP A . n A 1 99 ALA 99 98 98 ALA ALA A . n A 1 100 PHE 100 99 99 PHE PHE A . n A 1 101 LEU 101 100 100 LEU LEU A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 SER 105 104 104 SER SER A . n A 1 106 HIS 106 105 105 HIS HIS A . n A 1 107 CYS 107 106 106 CYS CYS A . n A 1 108 ASP 108 107 107 ASP ASP A . n A 1 109 SER 109 108 108 SER SER A . n A 1 110 TYR 110 109 109 TYR TYR A . n A 1 111 PHE 111 110 110 PHE PHE A . n A 1 112 LEU 112 111 111 LEU LEU A . n A 1 113 ASP 113 112 112 ASP ASP A . n A 1 114 GLU 114 113 113 GLU GLU A . n A 1 115 GLN 115 114 114 GLN GLN A . n A 1 116 SER 116 115 115 SER SER A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 ILE 119 118 118 ILE ILE A . n A 1 120 PHE 120 119 119 PHE PHE A . n A 1 121 ASP 121 120 120 ASP ASP A . n A 1 122 ASP 122 121 121 ASP ASP A . n A 1 123 PHE 123 122 122 PHE PHE A . n A 1 124 ILE 124 123 123 ILE ILE A . n A 1 125 GLY 125 124 124 GLY GLY A . n A 1 126 PHE 126 125 125 PHE PHE A . n A 1 127 PHE 127 126 126 PHE PHE A . n A 1 128 MSE 128 127 127 MSE MSE A . n A 1 129 ASN 129 128 128 ASN ASN A . n A 1 130 ILE 130 129 129 ILE ILE A . n A 1 131 ILE 131 130 130 ILE ILE A . n A 1 132 GLU 132 131 131 GLU GLU A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 GLY 134 133 133 GLY GLY A . n A 1 135 ILE 135 134 134 ILE ILE A . n A 1 136 VAL 136 135 135 VAL VAL A . n A 1 137 LYS 137 136 136 LYS LYS A . n A 1 138 GLY 138 137 137 GLY GLY A . n A 1 139 LEU 139 138 138 LEU LEU A . n A 1 140 LEU 140 139 139 LEU LEU A . n A 1 141 ARG 141 140 140 ARG ARG A . n A 1 142 PRO 142 141 141 PRO PRO A . n A 1 143 LEU 143 142 142 LEU LEU A . n A 1 144 PRO 144 143 143 PRO PRO A . n A 1 145 PRO 145 144 144 PRO PRO A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 ALA 147 146 146 ALA ALA A . n A 1 148 LEU 148 147 147 LEU LEU A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 ILE 150 149 149 ILE ILE A . n A 1 151 ILE 151 150 150 ILE ILE A . n A 1 152 VAL 152 151 151 VAL VAL A . n A 1 153 TYR 153 152 152 TYR TYR A . n A 1 154 GLN 154 153 153 GLN GLN A . n A 1 155 PRO 155 154 154 PRO PRO A . n A 1 156 LEU 156 155 155 LEU LEU A . n A 1 157 GLU 157 156 156 GLU GLU A . n A 1 158 LYS 158 157 157 LYS LYS A . n A 1 159 LEU 159 158 158 LEU LEU A . n A 1 160 ILE 160 159 159 ILE ILE A . n A 1 161 LYS 161 160 160 LYS LYS A . n A 1 162 VAL 162 161 161 VAL VAL A . n A 1 163 ILE 163 162 162 ILE ILE A . n A 1 164 ALA 164 163 163 ALA ALA A . n A 1 165 THR 165 164 164 THR THR A . n A 1 166 GLY 166 165 165 GLY GLY A . n A 1 167 GLN 167 166 166 GLN GLN A . n A 1 168 LEU 168 167 167 LEU LEU A . n A 1 169 GLU 169 168 168 GLU GLU A . n A 1 170 TYR 170 169 169 TYR TYR A . n A 1 171 SER 171 170 170 SER SER A . n A 1 172 LYS 172 171 171 LYS LYS A . n A 1 173 GLU 173 172 172 GLU GLU A . n A 1 174 LEU 174 173 173 LEU LEU A . n A 1 175 VAL 175 174 174 VAL VAL A . n A 1 176 LYS 176 175 175 LYS LYS A . n A 1 177 GLU 177 176 176 GLU GLU A . n A 1 178 LEU 178 177 177 LEU LEU A . n A 1 179 GLU 179 178 178 GLU GLU A . n A 1 180 GLU 180 179 179 GLU GLU A . n A 1 181 SER 181 180 180 SER SER A . n A 1 182 SER 182 181 181 SER SER A . n A 1 183 TRP 183 182 182 TRP TRP A . n A 1 184 ASN 184 183 183 ASN ASN A . n A 1 185 ALA 185 184 184 ALA ALA A . n A 1 186 ILE 186 185 185 ILE ILE A . n A 1 187 ARG 187 186 186 ARG ARG A . n A 1 188 ILE 188 187 187 ILE ILE A . n A 1 189 ILE 189 188 188 ILE ILE A . n B 1 1 GLY 1 0 ? ? ? B . n B 1 2 MSE 2 1 ? ? ? B . n B 1 3 ALA 3 2 ? ? ? B . n B 1 4 LYS 4 3 3 LYS LYS B . n B 1 5 ASN 5 4 4 ASN ASN B . n B 1 6 LYS 6 5 5 LYS LYS B . n B 1 7 GLN 7 6 6 GLN GLN B . n B 1 8 GLU 8 7 7 GLU GLU B . n B 1 9 ASP 9 8 8 ASP ASP B . n B 1 10 ILE 10 9 9 ILE ILE B . n B 1 11 PHE 11 10 10 PHE PHE B . n B 1 12 ASP 12 11 11 ASP ASP B . n B 1 13 ALA 13 12 12 ALA ALA B . n B 1 14 ALA 14 13 13 ALA ALA B . n B 1 15 MSE 15 14 14 MSE MSE B . n B 1 16 GLN 16 15 15 GLN GLN B . n B 1 17 LEU 17 16 16 LEU LEU B . n B 1 18 PHE 18 17 17 PHE PHE B . n B 1 19 ALA 19 18 18 ALA ALA B . n B 1 20 GLU 20 19 19 GLU GLU B . n B 1 21 ARG 21 20 20 ARG ARG B . n B 1 22 GLY 22 21 21 GLY GLY B . n B 1 23 TYR 23 22 22 TYR TYR B . n B 1 24 ASP 24 23 23 ASP ASP B . n B 1 25 GLY 25 24 24 GLY GLY B . n B 1 26 THR 26 25 25 THR THR B . n B 1 27 THR 27 26 26 THR THR B . n B 1 28 ILE 28 27 27 ILE ILE B . n B 1 29 PRO 29 28 28 PRO PRO B . n B 1 30 MSE 30 29 29 MSE MSE B . n B 1 31 ILE 31 30 30 ILE ILE B . n B 1 32 ALA 32 31 31 ALA ALA B . n B 1 33 GLU 33 32 32 GLU GLU B . n B 1 34 LYS 34 33 33 LYS LYS B . n B 1 35 ALA 35 34 34 ALA ALA B . n B 1 36 LYS 36 35 35 LYS LYS B . n B 1 37 VAL 37 36 36 VAL VAL B . n B 1 38 GLY 38 37 37 GLY GLY B . n B 1 39 ALA 39 38 38 ALA ALA B . n B 1 40 GLY 40 39 39 GLY GLY B . n B 1 41 THR 41 40 40 THR THR B . n B 1 42 ILE 42 41 41 ILE ILE B . n B 1 43 TYR 43 42 42 TYR TYR B . n B 1 44 ARG 44 43 43 ARG ARG B . n B 1 45 TYR 45 44 44 TYR TYR B . n B 1 46 PHE 46 45 45 PHE PHE B . n B 1 47 GLU 47 46 46 GLU GLU B . n B 1 48 ASN 48 47 47 ASN ASN B . n B 1 49 LYS 49 48 48 LYS LYS B . n B 1 50 GLU 50 49 49 GLU GLU B . n B 1 51 ALA 51 50 50 ALA ALA B . n B 1 52 LEU 52 51 51 LEU LEU B . n B 1 53 VAL 53 52 52 VAL VAL B . n B 1 54 ASN 54 53 53 ASN ASN B . n B 1 55 SER 55 54 54 SER SER B . n B 1 56 LEU 56 55 55 LEU LEU B . n B 1 57 PHE 57 56 56 PHE PHE B . n B 1 58 SER 58 57 57 SER SER B . n B 1 59 LYS 59 58 58 LYS LYS B . n B 1 60 SER 60 59 59 SER SER B . n B 1 61 MSE 61 60 60 MSE MSE B . n B 1 62 LEU 62 61 61 LEU LEU B . n B 1 63 GLN 63 62 62 GLN GLN B . n B 1 64 LEU 64 63 63 LEU LEU B . n B 1 65 SER 65 64 64 SER SER B . n B 1 66 GLU 66 65 65 GLU GLU B . n B 1 67 MSE 67 66 66 MSE MSE B . n B 1 68 ILE 68 67 67 ILE ILE B . n B 1 69 LYS 69 68 68 LYS LYS B . n B 1 70 THR 70 69 69 THR THR B . n B 1 71 ASP 71 70 70 ASP ASP B . n B 1 72 PHE 72 71 71 PHE PHE B . n B 1 73 PRO 73 72 72 PRO PRO B . n B 1 74 VAL 74 73 73 VAL VAL B . n B 1 75 GLU 75 74 74 GLU GLU B . n B 1 76 ALA 76 75 75 ALA ALA B . n B 1 77 ASN 77 76 76 ASN ASN B . n B 1 78 ILE 78 77 77 ILE ILE B . n B 1 79 ARG 79 78 78 ARG ARG B . n B 1 80 GLU 80 79 79 GLU GLU B . n B 1 81 GLN 81 80 80 GLN GLN B . n B 1 82 PHE 82 81 81 PHE PHE B . n B 1 83 SER 83 82 82 SER SER B . n B 1 84 HIS 84 83 83 HIS HIS B . n B 1 85 THR 85 84 84 THR THR B . n B 1 86 TYR 86 85 85 TYR TYR B . n B 1 87 ASN 87 86 86 ASN ASN B . n B 1 88 ARG 88 87 87 ARG ARG B . n B 1 89 LEU 89 88 88 LEU LEU B . n B 1 90 PHE 90 89 89 PHE PHE B . n B 1 91 GLU 91 90 90 GLU GLU B . n B 1 92 PHE 92 91 91 PHE PHE B . n B 1 93 ALA 93 92 92 ALA ALA B . n B 1 94 ARG 94 93 93 ARG ARG B . n B 1 95 ASN 95 94 94 ASN ASN B . n B 1 96 ASN 96 95 95 ASN ASN B . n B 1 97 VAL 97 96 96 VAL VAL B . n B 1 98 ASP 98 97 97 ASP ASP B . n B 1 99 ALA 99 98 98 ALA ALA B . n B 1 100 PHE 100 99 99 PHE PHE B . n B 1 101 LEU 101 100 100 LEU LEU B . n B 1 102 PHE 102 101 101 PHE PHE B . n B 1 103 THR 103 102 102 THR THR B . n B 1 104 ASN 104 103 103 ASN ASN B . n B 1 105 SER 105 104 104 SER SER B . n B 1 106 HIS 106 105 105 HIS HIS B . n B 1 107 CYS 107 106 106 CYS CYS B . n B 1 108 ASP 108 107 107 ASP ASP B . n B 1 109 SER 109 108 108 SER SER B . n B 1 110 TYR 110 109 109 TYR TYR B . n B 1 111 PHE 111 110 110 PHE PHE B . n B 1 112 LEU 112 111 111 LEU LEU B . n B 1 113 ASP 113 112 112 ASP ASP B . n B 1 114 GLU 114 113 113 GLU GLU B . n B 1 115 GLN 115 114 114 GLN GLN B . n B 1 116 SER 116 115 115 SER SER B . n B 1 117 LYS 117 116 116 LYS LYS B . n B 1 118 LYS 118 117 117 LYS LYS B . n B 1 119 ILE 119 118 118 ILE ILE B . n B 1 120 PHE 120 119 119 PHE PHE B . n B 1 121 ASP 121 120 120 ASP ASP B . n B 1 122 ASP 122 121 121 ASP ASP B . n B 1 123 PHE 123 122 122 PHE PHE B . n B 1 124 ILE 124 123 123 ILE ILE B . n B 1 125 GLY 125 124 124 GLY GLY B . n B 1 126 PHE 126 125 125 PHE PHE B . n B 1 127 PHE 127 126 126 PHE PHE B . n B 1 128 MSE 128 127 127 MSE MSE B . n B 1 129 ASN 129 128 128 ASN ASN B . n B 1 130 ILE 130 129 129 ILE ILE B . n B 1 131 ILE 131 130 130 ILE ILE B . n B 1 132 GLU 132 131 131 GLU GLU B . n B 1 133 ASP 133 132 132 ASP ASP B . n B 1 134 GLY 134 133 133 GLY GLY B . n B 1 135 ILE 135 134 134 ILE ILE B . n B 1 136 VAL 136 135 135 VAL VAL B . n B 1 137 LYS 137 136 136 LYS LYS B . n B 1 138 GLY 138 137 137 GLY GLY B . n B 1 139 LEU 139 138 138 LEU LEU B . n B 1 140 LEU 140 139 139 LEU LEU B . n B 1 141 ARG 141 140 140 ARG ARG B . n B 1 142 PRO 142 141 141 PRO PRO B . n B 1 143 LEU 143 142 142 LEU LEU B . n B 1 144 PRO 144 143 143 PRO PRO B . n B 1 145 PRO 145 144 144 PRO PRO B . n B 1 146 VAL 146 145 145 VAL VAL B . n B 1 147 ALA 147 146 146 ALA ALA B . n B 1 148 LEU 148 147 147 LEU LEU B . n B 1 149 ILE 149 148 148 ILE ILE B . n B 1 150 ILE 150 149 149 ILE ILE B . n B 1 151 ILE 151 150 150 ILE ILE B . n B 1 152 VAL 152 151 151 VAL VAL B . n B 1 153 TYR 153 152 152 TYR TYR B . n B 1 154 GLN 154 153 153 GLN GLN B . n B 1 155 PRO 155 154 154 PRO PRO B . n B 1 156 LEU 156 155 155 LEU LEU B . n B 1 157 GLU 157 156 156 GLU GLU B . n B 1 158 LYS 158 157 157 LYS LYS B . n B 1 159 LEU 159 158 158 LEU LEU B . n B 1 160 ILE 160 159 159 ILE ILE B . n B 1 161 LYS 161 160 160 LYS LYS B . n B 1 162 VAL 162 161 161 VAL VAL B . n B 1 163 ILE 163 162 162 ILE ILE B . n B 1 164 ALA 164 163 163 ALA ALA B . n B 1 165 THR 165 164 164 THR THR B . n B 1 166 GLY 166 165 165 GLY GLY B . n B 1 167 GLN 167 166 166 GLN GLN B . n B 1 168 LEU 168 167 167 LEU LEU B . n B 1 169 GLU 169 168 168 GLU GLU B . n B 1 170 TYR 170 169 169 TYR TYR B . n B 1 171 SER 171 170 170 SER SER B . n B 1 172 LYS 172 171 171 LYS LYS B . n B 1 173 GLU 173 172 172 GLU GLU B . n B 1 174 LEU 174 173 173 LEU LEU B . n B 1 175 VAL 175 174 174 VAL VAL B . n B 1 176 LYS 176 175 175 LYS LYS B . n B 1 177 GLU 177 176 176 GLU GLU B . n B 1 178 LEU 178 177 177 LEU LEU B . n B 1 179 GLU 179 178 178 GLU GLU B . n B 1 180 GLU 180 179 179 GLU GLU B . n B 1 181 SER 181 180 180 SER SER B . n B 1 182 SER 182 181 181 SER SER B . n B 1 183 TRP 183 182 182 TRP TRP B . n B 1 184 ASN 184 183 183 ASN ASN B . n B 1 185 ALA 185 184 184 ALA ALA B . n B 1 186 ILE 186 185 185 ILE ILE B . n B 1 187 ARG 187 186 186 ARG ARG B . n B 1 188 ILE 188 187 187 ILE ILE B . n B 1 189 ILE 189 188 188 ILE ILE B . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CL 1 201 201 CL CL A . D 3 PO4 1 200 200 PO4 PO4 B . E 4 HOH 1 301 202 HOH HOH A . E 4 HOH 2 302 203 HOH HOH A . E 4 HOH 3 303 204 HOH HOH A . E 4 HOH 4 304 205 HOH HOH A . E 4 HOH 5 305 206 HOH HOH A . E 4 HOH 6 306 207 HOH HOH A . E 4 HOH 7 307 208 HOH HOH A . E 4 HOH 8 308 211 HOH HOH A . E 4 HOH 9 309 212 HOH HOH A . E 4 HOH 10 310 213 HOH HOH A . E 4 HOH 11 311 215 HOH HOH A . E 4 HOH 12 312 217 HOH HOH A . E 4 HOH 13 313 218 HOH HOH A . E 4 HOH 14 314 220 HOH HOH A . E 4 HOH 15 315 224 HOH HOH A . E 4 HOH 16 316 225 HOH HOH A . E 4 HOH 17 317 226 HOH HOH A . E 4 HOH 18 318 229 HOH HOH A . E 4 HOH 19 319 231 HOH HOH A . E 4 HOH 20 320 232 HOH HOH A . E 4 HOH 21 321 233 HOH HOH A . E 4 HOH 22 322 234 HOH HOH A . E 4 HOH 23 323 235 HOH HOH A . E 4 HOH 24 324 236 HOH HOH A . E 4 HOH 25 325 238 HOH HOH A . E 4 HOH 26 326 239 HOH HOH A . E 4 HOH 27 327 240 HOH HOH A . E 4 HOH 28 328 241 HOH HOH A . E 4 HOH 29 329 242 HOH HOH A . E 4 HOH 30 330 244 HOH HOH A . E 4 HOH 31 331 245 HOH HOH A . E 4 HOH 32 332 247 HOH HOH A . E 4 HOH 33 333 248 HOH HOH A . E 4 HOH 34 334 249 HOH HOH A . E 4 HOH 35 335 250 HOH HOH A . E 4 HOH 36 336 251 HOH HOH A . E 4 HOH 37 337 252 HOH HOH A . E 4 HOH 38 338 253 HOH HOH A . E 4 HOH 39 339 259 HOH HOH A . E 4 HOH 40 340 260 HOH HOH A . E 4 HOH 41 341 261 HOH HOH A . E 4 HOH 42 342 262 HOH HOH A . E 4 HOH 43 343 263 HOH HOH A . E 4 HOH 44 344 264 HOH HOH A . E 4 HOH 45 345 265 HOH HOH A . E 4 HOH 46 346 270 HOH HOH A . E 4 HOH 47 347 271 HOH HOH A . E 4 HOH 48 348 272 HOH HOH A . E 4 HOH 49 349 274 HOH HOH A . E 4 HOH 50 350 275 HOH HOH A . E 4 HOH 51 351 276 HOH HOH A . E 4 HOH 52 352 277 HOH HOH A . E 4 HOH 53 353 279 HOH HOH A . E 4 HOH 54 354 280 HOH HOH A . E 4 HOH 55 355 285 HOH HOH A . E 4 HOH 56 356 286 HOH HOH A . E 4 HOH 57 357 287 HOH HOH A . E 4 HOH 58 358 289 HOH HOH A . F 4 HOH 1 301 209 HOH HOH B . F 4 HOH 2 302 210 HOH HOH B . F 4 HOH 3 303 214 HOH HOH B . F 4 HOH 4 304 216 HOH HOH B . F 4 HOH 5 305 219 HOH HOH B . F 4 HOH 6 306 221 HOH HOH B . F 4 HOH 7 307 222 HOH HOH B . F 4 HOH 8 308 223 HOH HOH B . F 4 HOH 9 309 227 HOH HOH B . F 4 HOH 10 310 228 HOH HOH B . F 4 HOH 11 311 230 HOH HOH B . F 4 HOH 12 312 237 HOH HOH B . F 4 HOH 13 313 243 HOH HOH B . F 4 HOH 14 314 246 HOH HOH B . F 4 HOH 15 315 254 HOH HOH B . F 4 HOH 16 316 255 HOH HOH B . F 4 HOH 17 317 256 HOH HOH B . F 4 HOH 18 318 257 HOH HOH B . F 4 HOH 19 319 258 HOH HOH B . F 4 HOH 20 320 266 HOH HOH B . F 4 HOH 21 321 267 HOH HOH B . F 4 HOH 22 322 268 HOH HOH B . F 4 HOH 23 323 269 HOH HOH B . F 4 HOH 24 324 273 HOH HOH B . F 4 HOH 25 325 278 HOH HOH B . F 4 HOH 26 326 281 HOH HOH B . F 4 HOH 27 327 282 HOH HOH B . F 4 HOH 28 328 283 HOH HOH B . F 4 HOH 29 329 284 HOH HOH B . F 4 HOH 30 330 288 HOH HOH B . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 2 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 15 A MSE 14 ? MET SELENOMETHIONINE 3 A MSE 30 A MSE 29 ? MET SELENOMETHIONINE 4 A MSE 61 A MSE 60 ? MET SELENOMETHIONINE 5 A MSE 67 A MSE 66 ? MET SELENOMETHIONINE 6 A MSE 128 A MSE 127 ? MET SELENOMETHIONINE 7 B MSE 15 B MSE 14 ? MET SELENOMETHIONINE 8 B MSE 30 B MSE 29 ? MET SELENOMETHIONINE 9 B MSE 61 B MSE 60 ? MET SELENOMETHIONINE 10 B MSE 67 B MSE 66 ? MET SELENOMETHIONINE 11 B MSE 128 B MSE 127 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2540 ? 1 MORE -28 ? 1 'SSA (A^2)' 18350 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-25 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2018-01-24 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' citation_author 3 4 'Structure model' database_2 4 4 'Structure model' struct_conn 5 4 'Structure model' struct_ref_seq_dif 6 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.classification' 2 2 'Structure model' '_software.name' 3 3 'Structure model' '_citation_author.name' 4 4 'Structure model' '_database_2.pdbx_DOI' 5 4 'Structure model' '_database_2.pdbx_database_accession' 6 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 7 4 'Structure model' '_struct_ref_seq_dif.details' 8 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 9 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 10 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 11.4400 19.5210 -6.3589 -0.0606 -0.1644 -0.0770 -0.0282 -0.0070 0.0197 1.1640 1.0876 2.8713 -0.1162 -0.1915 0.2853 0.0301 -0.0012 -0.0289 0.1054 0.2210 -0.0764 -0.1272 -0.4455 0.1861 'X-RAY DIFFRACTION' 2 ? refined 0.6611 40.3597 4.5913 -0.0164 -0.1841 -0.0738 -0.0238 0.0062 0.0098 0.7268 4.2007 1.6745 -1.1703 0.3425 -2.3398 -0.1714 0.2257 -0.0543 0.0509 0.2624 -0.0940 0.4428 -0.3047 -0.0906 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 188 '{ A|1 - A|188 }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 3 B 188 '{ B|3 - B|188 }' ? ? ? ? ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SOLVE . ? program 'Tom Terwilliger' terwilliger@LANL.gov phasing http://www.solve.lanl.gov/ ? ? 4 SCALA 3.3.20 ? package 'Phil Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' ? ? ? 5 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? 7 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 1-188 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4ME9 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ALA _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 2 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -46.42 _pdbx_validate_torsion.psi 108.07 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 3 ? CG ? A LYS 4 CG 2 1 Y 1 A LYS 3 ? CD ? A LYS 4 CD 3 1 Y 1 A LYS 3 ? CE ? A LYS 4 CE 4 1 Y 1 A LYS 3 ? NZ ? A LYS 4 NZ 5 1 Y 1 A ARG 20 ? CG ? A ARG 21 CG 6 1 Y 1 A ARG 20 ? CD ? A ARG 21 CD 7 1 Y 1 A ARG 20 ? NE ? A ARG 21 NE 8 1 Y 1 A ARG 20 ? CZ ? A ARG 21 CZ 9 1 Y 1 A ARG 20 ? NH1 ? A ARG 21 NH1 10 1 Y 1 A ARG 20 ? NH2 ? A ARG 21 NH2 11 1 Y 1 A LYS 35 ? CG ? A LYS 36 CG 12 1 Y 1 A LYS 35 ? CD ? A LYS 36 CD 13 1 Y 1 A LYS 35 ? CE ? A LYS 36 CE 14 1 Y 1 A LYS 35 ? NZ ? A LYS 36 NZ 15 1 Y 1 A VAL 36 ? CG1 ? A VAL 37 CG1 16 1 Y 1 A VAL 36 ? CG2 ? A VAL 37 CG2 17 1 Y 1 A GLU 113 ? CG ? A GLU 114 CG 18 1 Y 1 A GLU 113 ? CD ? A GLU 114 CD 19 1 Y 1 A GLU 113 ? OE1 ? A GLU 114 OE1 20 1 Y 1 A GLU 113 ? OE2 ? A GLU 114 OE2 21 1 Y 1 B LYS 3 ? CG ? B LYS 4 CG 22 1 Y 1 B LYS 3 ? CD ? B LYS 4 CD 23 1 Y 1 B LYS 3 ? CE ? B LYS 4 CE 24 1 Y 1 B LYS 3 ? NZ ? B LYS 4 NZ 25 1 Y 1 B ASN 4 ? CG ? B ASN 5 CG 26 1 Y 1 B ASN 4 ? OD1 ? B ASN 5 OD1 27 1 Y 1 B ASN 4 ? ND2 ? B ASN 5 ND2 28 1 Y 1 B LYS 5 ? CG ? B LYS 6 CG 29 1 Y 1 B LYS 5 ? CD ? B LYS 6 CD 30 1 Y 1 B LYS 5 ? CE ? B LYS 6 CE 31 1 Y 1 B LYS 5 ? NZ ? B LYS 6 NZ 32 1 Y 1 B GLU 7 ? CG ? B GLU 8 CG 33 1 Y 1 B GLU 7 ? CD ? B GLU 8 CD 34 1 Y 1 B GLU 7 ? OE1 ? B GLU 8 OE1 35 1 Y 1 B GLU 7 ? OE2 ? B GLU 8 OE2 36 1 Y 1 B ASP 11 ? CG ? B ASP 12 CG 37 1 Y 1 B ASP 11 ? OD1 ? B ASP 12 OD1 38 1 Y 1 B ASP 11 ? OD2 ? B ASP 12 OD2 39 1 Y 1 B GLN 15 ? CG ? B GLN 16 CG 40 1 Y 1 B GLN 15 ? CD ? B GLN 16 CD 41 1 Y 1 B GLN 15 ? OE1 ? B GLN 16 OE1 42 1 Y 1 B GLN 15 ? NE2 ? B GLN 16 NE2 43 1 Y 1 B LEU 16 ? CG ? B LEU 17 CG 44 1 Y 1 B LEU 16 ? CD1 ? B LEU 17 CD1 45 1 Y 1 B LEU 16 ? CD2 ? B LEU 17 CD2 46 1 Y 1 B GLU 19 ? CG ? B GLU 20 CG 47 1 Y 1 B GLU 19 ? CD ? B GLU 20 CD 48 1 Y 1 B GLU 19 ? OE1 ? B GLU 20 OE1 49 1 Y 1 B GLU 19 ? OE2 ? B GLU 20 OE2 50 1 Y 1 B ARG 20 ? CG ? B ARG 21 CG 51 1 Y 1 B ARG 20 ? CD ? B ARG 21 CD 52 1 Y 1 B ARG 20 ? NE ? B ARG 21 NE 53 1 Y 1 B ARG 20 ? CZ ? B ARG 21 CZ 54 1 Y 1 B ARG 20 ? NH1 ? B ARG 21 NH1 55 1 Y 1 B ARG 20 ? NH2 ? B ARG 21 NH2 56 1 Y 1 B LYS 33 ? CG ? B LYS 34 CG 57 1 Y 1 B LYS 33 ? CD ? B LYS 34 CD 58 1 Y 1 B LYS 33 ? CE ? B LYS 34 CE 59 1 Y 1 B LYS 33 ? NZ ? B LYS 34 NZ 60 1 Y 1 B LYS 35 ? CG ? B LYS 36 CG 61 1 Y 1 B LYS 35 ? CD ? B LYS 36 CD 62 1 Y 1 B LYS 35 ? CE ? B LYS 36 CE 63 1 Y 1 B LYS 35 ? NZ ? B LYS 36 NZ 64 1 Y 1 B ARG 43 ? CG ? B ARG 44 CG 65 1 Y 1 B ARG 43 ? CD ? B ARG 44 CD 66 1 Y 1 B ARG 43 ? NE ? B ARG 44 NE 67 1 Y 1 B ARG 43 ? CZ ? B ARG 44 CZ 68 1 Y 1 B ARG 43 ? NH1 ? B ARG 44 NH1 69 1 Y 1 B ARG 43 ? NH2 ? B ARG 44 NH2 70 1 Y 1 B TYR 44 ? CG ? B TYR 45 CG 71 1 Y 1 B TYR 44 ? CD1 ? B TYR 45 CD1 72 1 Y 1 B TYR 44 ? CD2 ? B TYR 45 CD2 73 1 Y 1 B TYR 44 ? CE1 ? B TYR 45 CE1 74 1 Y 1 B TYR 44 ? CE2 ? B TYR 45 CE2 75 1 Y 1 B TYR 44 ? CZ ? B TYR 45 CZ 76 1 Y 1 B TYR 44 ? OH ? B TYR 45 OH 77 1 Y 1 B GLU 49 ? CG ? B GLU 50 CG 78 1 Y 1 B GLU 49 ? CD ? B GLU 50 CD 79 1 Y 1 B GLU 49 ? OE1 ? B GLU 50 OE1 80 1 Y 1 B GLU 49 ? OE2 ? B GLU 50 OE2 81 1 Y 1 B GLU 74 ? CG ? B GLU 75 CG 82 1 Y 1 B GLU 74 ? CD ? B GLU 75 CD 83 1 Y 1 B GLU 74 ? OE1 ? B GLU 75 OE1 84 1 Y 1 B GLU 74 ? OE2 ? B GLU 75 OE2 85 1 Y 1 B ASP 107 ? CG ? B ASP 108 CG 86 1 Y 1 B ASP 107 ? OD1 ? B ASP 108 OD1 87 1 Y 1 B ASP 107 ? OD2 ? B ASP 108 OD2 88 1 Y 1 B TYR 109 ? CG ? B TYR 110 CG 89 1 Y 1 B TYR 109 ? CD1 ? B TYR 110 CD1 90 1 Y 1 B TYR 109 ? CD2 ? B TYR 110 CD2 91 1 Y 1 B TYR 109 ? CE1 ? B TYR 110 CE1 92 1 Y 1 B TYR 109 ? CE2 ? B TYR 110 CE2 93 1 Y 1 B TYR 109 ? CZ ? B TYR 110 CZ 94 1 Y 1 B TYR 109 ? OH ? B TYR 110 OH # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 B GLY 0 ? B GLY 1 3 1 Y 1 B MSE 1 ? B MSE 2 4 1 Y 1 B ALA 2 ? B ALA 3 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'PHOSPHATE ION' PO4 4 water HOH #