HEADER TRANSPORT PROTEIN 29-AUG-13 4MHF TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 POLAROMONAS SP. JS666 (BPRO_3107), TARGET EFI-510173, WITH BOUND TITLE 3 ALPHA/BETA D-GLUCURONATE, SPACE GROUP P21 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: POLAROMONAS; SOURCE 3 ORGANISM_TAXID: 296591; SOURCE 4 STRAIN: JS666 / ATCC BAA-500; SOURCE 5 GENE: BPRO_3107; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,L.L.MORISCO,S.R.WASSERMAN, AUTHOR 2 S.SOJITRA,S.ZHAO,M.STEAD,E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY, AUTHOR 3 B.EVANS,J.HAMMONDS,B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER, AUTHOR 4 M.P.JACOBSON,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 3 29-JUL-20 4MHF 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 SITE REVDAT 2 25-FEB-15 4MHF 1 JRNL REVDAT 1 18-SEP-13 4MHF 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 21.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 41631 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.119 REMARK 3 R VALUE (WORKING SET) : 0.117 REMARK 3 FREE R VALUE : 0.145 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2108 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 21.5839 - 3.6077 0.98 2932 130 0.1336 0.1355 REMARK 3 2 3.6077 - 2.8657 0.97 2794 164 0.1214 0.1498 REMARK 3 3 2.8657 - 2.5041 0.96 2765 155 0.1167 0.1438 REMARK 3 4 2.5041 - 2.2754 0.95 2728 139 0.1086 0.1388 REMARK 3 5 2.2754 - 2.1124 0.94 2716 139 0.1052 0.1325 REMARK 3 6 2.1124 - 1.9880 0.93 2648 156 0.1061 0.1451 REMARK 3 7 1.9880 - 1.8885 0.93 2620 145 0.1121 0.1383 REMARK 3 8 1.8885 - 1.8063 0.92 2625 146 0.1136 0.1498 REMARK 3 9 1.8063 - 1.7368 0.91 2607 139 0.1161 0.1493 REMARK 3 10 1.7368 - 1.6769 0.91 2543 149 0.1152 0.1631 REMARK 3 11 1.6769 - 1.6245 0.90 2558 126 0.1149 0.1418 REMARK 3 12 1.6245 - 1.5781 0.89 2494 138 0.1131 0.1443 REMARK 3 13 1.5781 - 1.5365 0.88 2539 137 0.1154 0.1430 REMARK 3 14 1.5365 - 1.4991 0.88 2514 117 0.1243 0.1829 REMARK 3 15 1.4991 - 1.4600 0.87 2440 128 0.1383 0.1604 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 8.31 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2416 REMARK 3 ANGLE : 1.249 3266 REMARK 3 CHIRALITY : 0.074 371 REMARK 3 PLANARITY : 0.008 419 REMARK 3 DIHEDRAL : 12.029 920 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 31:86 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6885 19.9542 46.0672 REMARK 3 T TENSOR REMARK 3 T11: 0.0413 T22: 0.0572 REMARK 3 T33: 0.0441 T12: -0.0115 REMARK 3 T13: 0.0044 T23: -0.0074 REMARK 3 L TENSOR REMARK 3 L11: 0.2712 L22: 0.1720 REMARK 3 L33: 0.1578 L12: -0.0288 REMARK 3 L13: -0.1548 L23: -0.0906 REMARK 3 S TENSOR REMARK 3 S11: 0.0044 S12: 0.0149 S13: 0.0167 REMARK 3 S21: -0.0313 S22: -0.0356 S23: 0.0542 REMARK 3 S31: 0.0110 S32: -0.0770 S33: -0.0008 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 87:158 ) REMARK 3 ORIGIN FOR THE GROUP (A): 22.9397 16.3556 49.5991 REMARK 3 T TENSOR REMARK 3 T11: 0.0342 T22: 0.0353 REMARK 3 T33: 0.0438 T12: -0.0074 REMARK 3 T13: 0.0009 T23: 0.0063 REMARK 3 L TENSOR REMARK 3 L11: 0.2227 L22: 0.1478 REMARK 3 L33: 0.2431 L12: -0.0568 REMARK 3 L13: 0.1994 L23: 0.0606 REMARK 3 S TENSOR REMARK 3 S11: 0.0310 S12: -0.0177 S13: -0.0596 REMARK 3 S21: 0.0140 S22: -0.0160 S23: -0.0256 REMARK 3 S31: 0.0263 S32: -0.0038 S33: 0.0006 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 159:221 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.0017 35.3631 54.3022 REMARK 3 T TENSOR REMARK 3 T11: 0.0601 T22: 0.0345 REMARK 3 T33: 0.0380 T12: -0.0110 REMARK 3 T13: -0.0106 T23: -0.0023 REMARK 3 L TENSOR REMARK 3 L11: 0.0966 L22: 0.1800 REMARK 3 L33: 0.2063 L12: -0.0256 REMARK 3 L13: -0.0084 L23: -0.1901 REMARK 3 S TENSOR REMARK 3 S11: -0.0343 S12: 0.0045 S13: 0.0562 REMARK 3 S21: 0.0810 S22: -0.0277 S23: -0.0419 REMARK 3 S31: -0.1142 S32: 0.0332 S33: -0.0031 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 222:240 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.8826 34.8657 45.7745 REMARK 3 T TENSOR REMARK 3 T11: 0.0579 T22: 0.0337 REMARK 3 T33: 0.0498 T12: -0.0043 REMARK 3 T13: -0.0011 T23: 0.0065 REMARK 3 L TENSOR REMARK 3 L11: 0.0452 L22: 0.0491 REMARK 3 L33: 0.1160 L12: 0.0333 REMARK 3 L13: 0.0428 L23: -0.0390 REMARK 3 S TENSOR REMARK 3 S11: 0.0258 S12: 0.0791 S13: -0.0166 REMARK 3 S21: 0.0114 S22: -0.0889 S23: 0.0094 REMARK 3 S31: -0.0751 S32: 0.0551 S33: -0.0024 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 241:289 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.0706 16.4652 42.2632 REMARK 3 T TENSOR REMARK 3 T11: 0.0429 T22: 0.0283 REMARK 3 T33: 0.0349 T12: -0.0148 REMARK 3 T13: 0.0042 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.2768 L22: 0.0633 REMARK 3 L33: 0.2222 L12: -0.0373 REMARK 3 L13: 0.0922 L23: 0.0799 REMARK 3 S TENSOR REMARK 3 S11: -0.0274 S12: 0.0084 S13: -0.0463 REMARK 3 S21: -0.0679 S22: -0.0124 S23: 0.0017 REMARK 3 S31: 0.0563 S32: -0.0208 S33: -0.0072 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 290:305 ) REMARK 3 ORIGIN FOR THE GROUP (A): 38.1522 33.3046 45.3070 REMARK 3 T TENSOR REMARK 3 T11: 0.0654 T22: 0.1058 REMARK 3 T33: 0.1294 T12: -0.0054 REMARK 3 T13: 0.0131 T23: 0.0359 REMARK 3 L TENSOR REMARK 3 L11: 0.0415 L22: 0.0441 REMARK 3 L33: 0.0485 L12: -0.0033 REMARK 3 L13: 0.0602 L23: 0.0201 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: 0.1444 S13: 0.1484 REMARK 3 S21: -0.0913 S22: -0.1358 S23: -0.1845 REMARK 3 S31: 0.0037 S32: 0.1758 S33: -0.0702 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 306:331 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.0223 12.7757 53.9085 REMARK 3 T TENSOR REMARK 3 T11: 0.0658 T22: 0.0681 REMARK 3 T33: 0.0939 T12: -0.0020 REMARK 3 T13: -0.0203 T23: 0.0045 REMARK 3 L TENSOR REMARK 3 L11: 0.0946 L22: 0.0206 REMARK 3 L33: 0.1117 L12: 0.0379 REMARK 3 L13: 0.0490 L23: 0.0412 REMARK 3 S TENSOR REMARK 3 S11: 0.0812 S12: 0.0468 S13: -0.0811 REMARK 3 S21: 0.0631 S22: 0.0288 S23: -0.0633 REMARK 3 S31: 0.1260 S32: 0.0529 S33: 0.0009 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MHF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081914. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV++ REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41662 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 63.409 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : 0.04600 REMARK 200 FOR THE DATA SET : 26.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.13300 REMARK 200 R SYM FOR SHELL (I) : 0.13300 REMARK 200 FOR SHELL : 4.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 31.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN (> 50 MG/ML, 10 MM HEPES, PH REMARK 280 7.5, 10 MM GLUCURONATE, 5 MM DTT); RESERVOIR (2.0 M AMMONIUM REMARK 280 SULFATE, 0.1 M TRIS, PH 8.5(MCSG1 F10)); CRYOPROTECTION (20% REMARK 280 DIETHYLENE GLYCOL, 80% OF RESERVOIR, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 22.98000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 ARG A 4 REMARK 465 THR A 5 REMARK 465 PRO A 6 REMARK 465 ARG A 7 REMARK 465 ILE A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 ILE A 11 REMARK 465 ARG A 12 REMARK 465 SER A 13 REMARK 465 ALA A 14 REMARK 465 ALA A 15 REMARK 465 LEU A 16 REMARK 465 ALA A 17 REMARK 465 ALA A 18 REMARK 465 LEU A 19 REMARK 465 LEU A 20 REMARK 465 ALA A 21 REMARK 465 GLY A 22 REMARK 465 LEU A 23 REMARK 465 GLY A 24 REMARK 465 MET A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 ALA A 28 REMARK 465 GLN A 29 REMARK 465 ALA A 30 REMARK 465 GLU A 332 REMARK 465 ASN A 333 REMARK 465 LEU A 334 REMARK 465 TYR A 335 REMARK 465 PHE A 336 REMARK 465 GLN A 337 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 157 HD1 HIS A 224 1.22 REMARK 500 O HOH A 659 O HOH A 939 2.08 REMARK 500 O HOH A 886 O HOH A 938 2.10 REMARK 500 O HOH A 716 O HOH A 831 2.12 REMARK 500 O HOH A 824 O HOH A 927 2.12 REMARK 500 NZ LYS A 255 O HOH A 947 2.13 REMARK 500 O GLU A 296 O HOH A 775 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 932 O HOH A 940 1455 2.09 REMARK 500 O HOH A 884 O HOH A 925 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 239 110.57 -32.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MIJ RELATED DB: PDB REMARK 900 RELATED ID: EFI-510173 RELATED DB: TARGETTRACK DBREF 4MHF A 1 330 UNP Q128M1 Q128M1_POLSJ 1 330 SEQADV 4MHF ALA A 331 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF GLU A 332 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF ASN A 333 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF LEU A 334 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF TYR A 335 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF PHE A 336 UNP Q128M1 EXPRESSION TAG SEQADV 4MHF GLN A 337 UNP Q128M1 EXPRESSION TAG SEQRES 1 A 337 MET THR ASN ARG THR PRO ARG ILE SER ALA ILE ARG SER SEQRES 2 A 337 ALA ALA LEU ALA ALA LEU LEU ALA GLY LEU GLY MET GLY SEQRES 3 A 337 ALA ALA GLN ALA THR GLU PHE ARG SER ALA ASP THR HIS SEQRES 4 A 337 ASN ALA ASP ASP TYR PRO THR VAL ALA ALA VAL LYS TYR SEQRES 5 A 337 MET GLY GLU LEU LEU GLU LYS LYS SER GLY GLY LYS HIS SEQRES 6 A 337 LYS ILE LYS VAL PHE ASN LYS GLN ALA LEU GLY SER GLU SEQRES 7 A 337 LYS GLU THR ILE ASP GLN VAL LYS ILE GLY ALA LEU ASP SEQRES 8 A 337 PHE THR ARG VAL ASN VAL GLY PRO MET ASN ALA ILE CYS SEQRES 9 A 337 PRO LEU THR GLN VAL PRO THR MET PRO PHE LEU PHE SER SEQRES 10 A 337 SER ILE ALA HIS MET ARG LYS SER LEU ASP GLY PRO VAL SEQRES 11 A 337 GLY ASP GLU ILE LEU LYS SER CYS GLU SER ALA GLY PHE SEQRES 12 A 337 ILE GLY LEU ALA PHE TYR ASP SER GLY ALA ARG SER ILE SEQRES 13 A 337 TYR ALA LYS LYS PRO ILE ARG THR VAL ALA ASP ALA LYS SEQRES 14 A 337 GLY LEU LYS ILE ARG VAL GLN GLN SER ASP LEU TRP VAL SEQRES 15 A 337 ALA LEU VAL SER ALA MET GLY ALA ASN ALA THR PRO MET SEQRES 16 A 337 PRO TYR GLY GLU VAL TYR THR GLY LEU LYS THR GLY LEU SEQRES 17 A 337 ILE ASP ALA ALA GLU ASN ASN ILE PRO SER PHE ASP THR SEQRES 18 A 337 ALA LYS HIS VAL GLU ALA VAL LYS VAL TYR SER LYS THR SEQRES 19 A 337 GLU HIS SER MET ALA PRO GLU ILE LEU VAL MET SER LYS SEQRES 20 A 337 ILE ILE TYR ASP LYS LEU PRO LYS ALA GLU GLN ASP MET SEQRES 21 A 337 ILE ARG ALA ALA ALA LYS GLU SER VAL ALA PHE GLU ARG SEQRES 22 A 337 GLN LYS TRP ASP GLU GLN GLU ALA LYS SER LEU ALA ASN SEQRES 23 A 337 VAL LYS ALA ALA GLY ALA GLU ILE VAL GLU VAL ASP LYS SEQRES 24 A 337 LYS SER PHE GLN ALA VAL MET GLY PRO VAL TYR ASP LYS SEQRES 25 A 337 PHE MET THR THR PRO ASP MET LYS ARG LEU VAL LYS ALA SEQRES 26 A 337 VAL GLN ASP THR LYS ALA GLU ASN LEU TYR PHE GLN HET BDP A 401 13 HET GCU A 402 13 HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETNAM GCU ALPHA-D-GLUCOPYRANURONIC ACID HETSYN BDP D-GLUCURONIC ACID FORMUL 2 BDP C6 H10 O7 FORMUL 3 GCU C6 H10 O7 FORMUL 4 HOH *471(H2 O) HELIX 1 1 TYR A 44 SER A 61 1 18 HELIX 2 2 SER A 77 ILE A 87 1 11 HELIX 3 3 GLY A 98 ASN A 101 5 4 HELIX 4 4 CYS A 104 LEU A 106 5 3 HELIX 5 5 THR A 107 MET A 112 1 6 HELIX 6 6 SER A 118 GLY A 128 1 11 HELIX 7 7 GLY A 128 CYS A 138 1 11 HELIX 8 8 GLU A 139 ALA A 141 5 3 HELIX 9 9 THR A 164 LYS A 169 1 6 HELIX 10 10 SER A 178 ALA A 187 1 10 HELIX 11 11 PRO A 196 GLY A 198 5 3 HELIX 12 12 GLU A 199 THR A 206 1 8 HELIX 13 13 ASN A 215 ALA A 222 1 8 HELIX 14 14 LYS A 223 VAL A 228 1 6 HELIX 15 15 LYS A 247 ASP A 251 1 5 HELIX 16 16 PRO A 254 ALA A 290 1 37 HELIX 17 17 ASP A 298 ALA A 304 1 7 HELIX 18 18 MET A 306 MET A 314 1 9 HELIX 19 19 THR A 316 ASP A 328 1 13 SHEET 1 A 5 LYS A 66 PHE A 70 0 SHEET 2 A 5 GLU A 32 ALA A 36 1 N SER A 35 O PHE A 70 SHEET 3 A 5 PHE A 92 ASN A 96 1 O ARG A 94 N ALA A 36 SHEET 4 A 5 GLU A 241 SER A 246 -1 O ILE A 242 N VAL A 95 SHEET 5 A 5 PHE A 143 TYR A 149 -1 N ILE A 144 O MET A 245 SHEET 1 B 4 ALA A 211 ASN A 214 0 SHEET 2 B 4 ARG A 154 ALA A 158 -1 N TYR A 157 O ALA A 212 SHEET 3 B 4 VAL A 230 SER A 237 -1 O SER A 237 N ARG A 154 SHEET 4 B 4 GLU A 293 VAL A 295 1 O VAL A 295 N TYR A 231 SHEET 1 C 2 LYS A 172 VAL A 175 0 SHEET 2 C 2 ASN A 191 PRO A 194 1 O THR A 193 N ILE A 173 SSBOND 1 CYS A 104 CYS A 138 1555 1555 2.06 CRYST1 45.480 45.960 63.980 90.00 97.66 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021988 0.000000 0.002957 0.00000 SCALE2 0.000000 0.021758 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015771 0.00000