HEADER VIRAL PROTEIN, TRANSFERASE 02-SEP-13 4MIW TITLE HIGH-RESOLUTION STRUCTURE OF THE N-TERMINAL ENDONUCLEASE DOMAIN OF THE TITLE 2 LASSA VIRUS L POLYMERASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: RNA-DIRECTED RNA POLYMERASE L; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: L-N TERMINAL DOMAIN; COMPND 5 SYNONYM: PROTEIN L; COMPND 6 EC: 2.7.7.48; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LASSA VIRUS; SOURCE 3 ORGANISM_TAXID: 11620; SOURCE 4 STRAIN: JOSAH; SOURCE 5 GENE: L; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PHISTEV KEYWDS BETA SHEET, HELIX, ENDORIBONUCLEASE TYPE II, ENDONUCLEASE, VIRAL KEYWDS 2 PROTEIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR G.D.WALLAT,Q.HUANG,W.WANG,H.DONG,H.LY,Y.LIANG,C.DONG REVDAT 3 20-SEP-23 4MIW 1 REMARK SEQADV LINK REVDAT 2 17-JUL-19 4MIW 1 REMARK REVDAT 1 19-MAR-14 4MIW 0 JRNL AUTH G.D.WALLAT,Q.HUANG,W.WANG,H.DONG,H.LY,Y.LIANG,C.DONG JRNL TITL HIGH-RESOLUTION STRUCTURE OF THE N-TERMINAL ENDONUCLEASE JRNL TITL 2 DOMAIN OF THE LASSA VIRUS L POLYMERASE IN COMPLEX WITH JRNL TITL 3 MAGNESIUM IONS. JRNL REF PLOS ONE V. 9 87577 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24516554 JRNL DOI 10.1371/JOURNAL.PONE.0087577 REMARK 2 REMARK 2 RESOLUTION. 1.72 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.72 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.81 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 24166 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.178 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1233 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 40.8257 - 3.5771 0.98 2801 140 0.1807 0.1690 REMARK 3 2 3.5771 - 2.8395 0.98 2640 140 0.1597 0.1866 REMARK 3 3 2.8395 - 2.4806 0.98 2596 124 0.1597 0.1655 REMARK 3 4 2.4806 - 2.2538 0.97 2542 145 0.1461 0.1786 REMARK 3 5 2.2538 - 2.0923 0.97 2511 151 0.1473 0.1766 REMARK 3 6 2.0923 - 1.9689 0.97 2523 128 0.1509 0.1804 REMARK 3 7 1.9689 - 1.8703 0.97 2482 143 0.1626 0.1857 REMARK 3 8 1.8703 - 1.7889 0.96 2484 141 0.1766 0.2091 REMARK 3 9 1.7889 - 1.7200 0.91 2354 121 0.1955 0.2578 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.140 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.950 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.46000 REMARK 3 B22 (A**2) : 3.46000 REMARK 3 B33 (A**2) : -6.93000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 1410 REMARK 3 ANGLE : 1.120 1907 REMARK 3 CHIRALITY : 0.063 220 REMARK 3 PLANARITY : 0.005 246 REMARK 3 DIHEDRAL : 11.961 544 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 19 ) REMARK 3 ORIGIN FOR THE GROUP (A): -12.0826 -7.0807 31.4294 REMARK 3 T TENSOR REMARK 3 T11: 0.2284 T22: 0.3973 REMARK 3 T33: 0.2762 T12: 0.1431 REMARK 3 T13: -0.0430 T23: -0.0790 REMARK 3 L TENSOR REMARK 3 L11: 2.9071 L22: 2.9433 REMARK 3 L33: 7.8607 L12: -0.6119 REMARK 3 L13: 2.2057 L23: -1.2529 REMARK 3 S TENSOR REMARK 3 S11: -0.2586 S12: -0.5394 S13: 0.2672 REMARK 3 S21: 0.1372 S22: 0.0483 S23: -0.3589 REMARK 3 S31: -0.4977 S32: 0.5794 S33: 0.1581 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 20 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): -14.8635 -15.0481 23.8717 REMARK 3 T TENSOR REMARK 3 T11: 0.1253 T22: 0.1349 REMARK 3 T33: 0.1588 T12: 0.0557 REMARK 3 T13: -0.0015 T23: 0.0144 REMARK 3 L TENSOR REMARK 3 L11: 3.3793 L22: 2.2252 REMARK 3 L33: 4.6576 L12: -0.6707 REMARK 3 L13: -0.4760 L23: -1.2695 REMARK 3 S TENSOR REMARK 3 S11: 0.0311 S12: 0.1328 S13: -0.2471 REMARK 3 S21: -0.2583 S22: -0.0528 S23: 0.0414 REMARK 3 S31: 0.4530 S32: -0.0818 S33: -0.0845 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 35 THROUGH 58 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.1977 -16.6935 23.8613 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.1243 REMARK 3 T33: 0.1426 T12: 0.0515 REMARK 3 T13: -0.0092 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 2.7785 L22: 0.7854 REMARK 3 L33: 4.1549 L12: -0.1409 REMARK 3 L13: -1.7968 L23: -0.3231 REMARK 3 S TENSOR REMARK 3 S11: -0.1174 S12: -0.2175 S13: -0.2779 REMARK 3 S21: 0.1341 S22: 0.0474 S23: -0.0239 REMARK 3 S31: -0.1342 S32: -0.1041 S33: -0.0671 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 59 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.0711 -19.7971 9.1184 REMARK 3 T TENSOR REMARK 3 T11: 0.0720 T22: 0.1608 REMARK 3 T33: 0.1107 T12: 0.0040 REMARK 3 T13: -0.0144 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 7.5853 L22: 3.8860 REMARK 3 L33: 1.0406 L12: 4.9288 REMARK 3 L13: -0.3365 L23: 0.6229 REMARK 3 S TENSOR REMARK 3 S11: -0.0094 S12: 0.2281 S13: 0.4131 REMARK 3 S21: -0.1612 S22: -0.0358 S23: 0.3718 REMARK 3 S31: 0.0337 S32: -0.4874 S33: -0.0412 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 69 THROUGH 89 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.1616 -28.9495 1.7887 REMARK 3 T TENSOR REMARK 3 T11: 0.1357 T22: 0.1036 REMARK 3 T33: 0.1278 T12: -0.0631 REMARK 3 T13: -0.0322 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.8026 L22: 0.5315 REMARK 3 L33: 2.7482 L12: -0.1544 REMARK 3 L13: 0.8624 L23: -0.2099 REMARK 3 S TENSOR REMARK 3 S11: 0.0495 S12: 0.0402 S13: -0.2896 REMARK 3 S21: -0.1709 S22: 0.2212 S23: 0.1613 REMARK 3 S31: 0.4840 S32: -0.0259 S33: 0.0238 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 90 THROUGH 108 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6863 -20.4595 8.6091 REMARK 3 T TENSOR REMARK 3 T11: 0.0561 T22: 0.1165 REMARK 3 T33: 0.0867 T12: -0.0341 REMARK 3 T13: -0.0036 T23: -0.0109 REMARK 3 L TENSOR REMARK 3 L11: 1.0357 L22: 0.8109 REMARK 3 L33: 4.5638 L12: -0.1506 REMARK 3 L13: 0.9449 L23: -0.4540 REMARK 3 S TENSOR REMARK 3 S11: -0.0635 S12: 0.1252 S13: -0.0479 REMARK 3 S21: -0.0520 S22: 0.0302 S23: 0.0101 REMARK 3 S31: -0.2008 S32: 0.2618 S33: 0.0332 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 109 THROUGH 144 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.1262 -27.4180 9.0493 REMARK 3 T TENSOR REMARK 3 T11: 0.0741 T22: 0.1326 REMARK 3 T33: 0.1187 T12: 0.0177 REMARK 3 T13: 0.0225 T23: -0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.5052 L22: 1.4023 REMARK 3 L33: 4.2508 L12: 0.2425 REMARK 3 L13: 1.2088 L23: 0.1162 REMARK 3 S TENSOR REMARK 3 S11: 0.0401 S12: 0.3261 S13: -0.3107 REMARK 3 S21: -0.0921 S22: -0.0259 S23: -0.1191 REMARK 3 S31: 0.5896 S32: 0.4826 S33: -0.0669 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 145 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 2.4588 -10.1984 23.7213 REMARK 3 T TENSOR REMARK 3 T11: 0.2071 T22: 0.1224 REMARK 3 T33: 0.2242 T12: 0.0077 REMARK 3 T13: -0.1003 T23: -0.0703 REMARK 3 L TENSOR REMARK 3 L11: 6.9606 L22: 3.0484 REMARK 3 L33: 2.5594 L12: -2.7029 REMARK 3 L13: 2.0355 L23: -1.4655 REMARK 3 S TENSOR REMARK 3 S11: -0.1378 S12: -0.2758 S13: 0.6802 REMARK 3 S21: -0.0726 S22: 0.3769 S23: -0.0259 REMARK 3 S31: -0.2388 S32: -0.0624 S33: 0.1623 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 170 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.1108 -11.3422 35.4628 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.3719 REMARK 3 T33: 0.1345 T12: 0.1545 REMARK 3 T13: -0.1995 T23: -0.1053 REMARK 3 L TENSOR REMARK 3 L11: 4.1402 L22: 1.2411 REMARK 3 L33: 1.5592 L12: -0.0182 REMARK 3 L13: 0.9204 L23: -0.1023 REMARK 3 S TENSOR REMARK 3 S11: -0.3758 S12: -0.8683 S13: 0.0454 REMARK 3 S21: 0.3376 S22: 0.1329 S23: -0.0397 REMARK 3 S31: -0.2731 S32: -0.1497 S33: 0.1260 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4MIW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081966. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 200 REMARK 200 PH : 8-9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9798 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22935 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.720 REMARK 200 RESOLUTION RANGE LOW (A) : 53.050 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 200 DATA REDUNDANCY : 9.300 REMARK 200 R MERGE (I) : 0.04800 REMARK 200 R SYM (I) : 0.06000 REMARK 200 FOR THE DATA SET : 23.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.72 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.70 REMARK 200 R MERGE FOR SHELL (I) : 0.57900 REMARK 200 R SYM FOR SHELL (I) : 0.57000 REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: PDB ENTRY 3JSB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.86 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM TRIS-HCL, PH8-9.5, 250 MM MGSO4 REMARK 280 AND 10% PEG10000, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.25500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 28.86000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 28.86000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 100.88250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 28.86000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 28.86000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 33.62750 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 28.86000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 28.86000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 100.88250 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 28.86000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 28.86000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 33.62750 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 67.25500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -7 REMARK 465 ALA A -6 REMARK 465 MET A -5 REMARK 465 ALA A -4 REMARK 465 ASP A -3 REMARK 465 ILE A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 406 O HOH A 454 1.89 REMARK 500 OD1 ASP A 10 O HOH A 430 1.89 REMARK 500 O HOH A 438 O HOH A 450 1.97 REMARK 500 OH TYR A 170 O HOH A 453 1.97 REMARK 500 O HOH A 412 O HOH A 416 2.00 REMARK 500 O HOH A 386 O HOH A 449 2.01 REMARK 500 SG CYS A 7 O HOH A 418 2.07 REMARK 500 O HOH A 404 O HOH A 454 2.09 REMARK 500 SG CYS A 84 O HOH A 413 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 89 OD2 REMARK 620 2 CYS A 103 O 92.6 REMARK 620 3 HOH A 407 O 173.7 81.2 REMARK 620 4 HOH A 408 O 89.2 100.0 91.2 REMARK 620 5 HOH A 438 O 99.3 167.1 86.9 75.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 202 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 89 OD1 REMARK 620 2 HOH A 404 O 89.3 REMARK 620 3 HOH A 405 O 94.8 174.4 REMARK 620 4 HOH A 406 O 167.7 79.7 96.6 REMARK 620 5 HOH A 437 O 92.4 87.9 88.0 92.7 REMARK 620 6 HOH A 438 O 96.7 91.9 91.6 78.2 170.8 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 202 DBREF 4MIW A 1 170 UNP Q6GWS2 Q6GWS2_9VIRU 1 170 SEQADV 4MIW GLY A -7 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW ALA A -6 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW MET A -5 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW ALA A -4 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW ASP A -3 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW ILE A -2 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW GLY A -1 UNP Q6GWS2 EXPRESSION TAG SEQADV 4MIW SER A 0 UNP Q6GWS2 EXPRESSION TAG SEQRES 1 A 178 GLY ALA MET ALA ASP ILE GLY SER MET GLU GLU ASP ILE SEQRES 2 A 178 ALA CYS VAL LYS ASP LEU VAL SER LYS TYR LEU VAL ASP SEQRES 3 A 178 ASN GLU ARG LEU SER ARG GLN LYS LEU ALA PHE LEU VAL SEQRES 4 A 178 GLN THR GLU PRO ARG MET LEU LEU MET GLU GLY LEU LYS SEQRES 5 A 178 LEU LEU SER LEU CYS ILE GLU VAL ASP SER CYS ASN ALA SEQRES 6 A 178 ASN GLY CYS GLU HIS ASN SER GLU ASP LYS SER VAL GLU SEQRES 7 A 178 ARG ILE LEU HIS ASP HIS GLY ILE LEU THR PRO SER LEU SEQRES 8 A 178 CYS PHE VAL VAL PRO ASP GLY TYR LYS LEU THR GLY ASN SEQRES 9 A 178 VAL LEU ILE LEU LEU GLU CYS PHE VAL ARG SER SER PRO SEQRES 10 A 178 ALA ASN PHE GLU GLN LYS TYR ILE GLU ASP PHE LYS LYS SEQRES 11 A 178 LEU GLU GLN LEU LYS GLU ASP LEU LYS SER VAL ASP ILE SEQRES 12 A 178 ASN LEU ILE PRO LEU ILE ASP GLY ARG THR SER PHE TYR SEQRES 13 A 178 ASN GLU GLN ILE PRO ASP TRP VAL ASN ASP LYS LEU ARG SEQRES 14 A 178 ASP THR LEU PHE SER LEU LEU LYS TYR HET MG A 201 1 HET MG A 202 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 HOH *158(H2 O) HELIX 1 1 MET A 1 LYS A 14 1 14 HELIX 2 2 ASN A 19 VAL A 31 1 13 HELIX 3 3 GLU A 34 GLY A 59 1 26 HELIX 4 4 SER A 68 GLY A 77 1 10 HELIX 5 5 SER A 108 GLN A 125 1 18 HELIX 6 6 LEU A 126 SER A 132 1 7 HELIX 7 7 PRO A 153 LEU A 168 1 16 SHEET 1 A 4 GLU A 61 HIS A 62 0 SHEET 2 A 4 GLY A 90 THR A 94 -1 O TYR A 91 N GLU A 61 SHEET 3 A 4 VAL A 97 VAL A 105 -1 O ILE A 99 N LYS A 92 SHEET 4 A 4 ASN A 136 ARG A 144 1 O LEU A 140 N LEU A 100 LINK OD2 ASP A 89 MG MG A 201 1555 1555 2.27 LINK OD1 ASP A 89 MG MG A 202 1555 1555 1.92 LINK O CYS A 103 MG MG A 201 1555 1555 2.32 LINK MG MG A 201 O HOH A 407 1555 1555 2.36 LINK MG MG A 201 O HOH A 408 1555 1555 2.49 LINK MG MG A 201 O HOH A 438 1555 1555 2.48 LINK MG MG A 202 O HOH A 404 1555 1555 2.12 LINK MG MG A 202 O HOH A 405 1555 1555 2.06 LINK MG MG A 202 O HOH A 406 1555 1555 2.28 LINK MG MG A 202 O HOH A 437 1555 1555 2.18 LINK MG MG A 202 O HOH A 438 1555 1555 2.07 SITE 1 AC1 5 ASP A 89 CYS A 103 HOH A 407 HOH A 408 SITE 2 AC1 5 HOH A 438 SITE 1 AC2 7 ASP A 89 HOH A 404 HOH A 405 HOH A 406 SITE 2 AC2 7 HOH A 437 HOH A 438 HOH A 454 CRYST1 57.720 57.720 134.510 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017325 0.000000 0.000000 0.00000 SCALE2 0.000000 0.017325 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007434 0.00000