data_4MJF # _entry.id 4MJF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4MJF pdb_00004mjf 10.2210/pdb4mjf/pdb RCSB RCSB081985 ? ? WWPDB D_1000081985 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-385698 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4MJF _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-09-03 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (BVU_2238) from Bacteroides vulgatus ATCC 8482 at 1.99 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4MJF _cell.length_a 64.719 _cell.length_b 71.913 _cell.length_c 65.504 _cell.angle_alpha 90.000 _cell.angle_beta 92.310 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MJF _symmetry.Int_Tables_number 5 _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein' 31392.744 1 ? ? ? ? 2 non-polymer syn '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' 221.317 2 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 4 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 5 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 4 ? ? ? ? 6 water nat water 18.015 123 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GDPFETLTEEIDSLTAPPDTTEA(MSE)AAVEEEP(MSE)VPATADESFADFFYNFASDEKLQLSRIVFPLPYYT(MSE) EKKEHIEKDQWKHDPLFSRQDAYTVLFDKAED(MSE)E(MSE)EKDTGLTSVKIEWIYLKKGKIKRYYFERLKGLWKLEA IDFAD(MSE)PREDTGKEDFFEFYERFANDSVFQLSRLHEPLKFVTADPEDEFQILETTLEAGQWFAFQPVLPRENLTNV NYGQNENVHSNTKVIE(MSE)KGFGNGFNNTLYFERRHGLWKL(MSE)QFEDLSD ; _entity_poly.pdbx_seq_one_letter_code_can ;GDPFETLTEEIDSLTAPPDTTEAMAAVEEEPMVPATADESFADFFYNFASDEKLQLSRIVFPLPYYTMEKKEHIEKDQWK HDPLFSRQDAYTVLFDKAEDMEMEKDTGLTSVKIEWIYLKKGKIKRYYFERLKGLWKLEAIDFADMPREDTGKEDFFEFY ERFANDSVFQLSRLHEPLKFVTADPEDEFQILETTLEAGQWFAFQPVLPRENLTNVNYGQNENVHSNTKVIEMKGFGNGF NNTLYFERRHGLWKLMQFEDLSD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-385698 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ASP n 1 3 PRO n 1 4 PHE n 1 5 GLU n 1 6 THR n 1 7 LEU n 1 8 THR n 1 9 GLU n 1 10 GLU n 1 11 ILE n 1 12 ASP n 1 13 SER n 1 14 LEU n 1 15 THR n 1 16 ALA n 1 17 PRO n 1 18 PRO n 1 19 ASP n 1 20 THR n 1 21 THR n 1 22 GLU n 1 23 ALA n 1 24 MSE n 1 25 ALA n 1 26 ALA n 1 27 VAL n 1 28 GLU n 1 29 GLU n 1 30 GLU n 1 31 PRO n 1 32 MSE n 1 33 VAL n 1 34 PRO n 1 35 ALA n 1 36 THR n 1 37 ALA n 1 38 ASP n 1 39 GLU n 1 40 SER n 1 41 PHE n 1 42 ALA n 1 43 ASP n 1 44 PHE n 1 45 PHE n 1 46 TYR n 1 47 ASN n 1 48 PHE n 1 49 ALA n 1 50 SER n 1 51 ASP n 1 52 GLU n 1 53 LYS n 1 54 LEU n 1 55 GLN n 1 56 LEU n 1 57 SER n 1 58 ARG n 1 59 ILE n 1 60 VAL n 1 61 PHE n 1 62 PRO n 1 63 LEU n 1 64 PRO n 1 65 TYR n 1 66 TYR n 1 67 THR n 1 68 MSE n 1 69 GLU n 1 70 LYS n 1 71 LYS n 1 72 GLU n 1 73 HIS n 1 74 ILE n 1 75 GLU n 1 76 LYS n 1 77 ASP n 1 78 GLN n 1 79 TRP n 1 80 LYS n 1 81 HIS n 1 82 ASP n 1 83 PRO n 1 84 LEU n 1 85 PHE n 1 86 SER n 1 87 ARG n 1 88 GLN n 1 89 ASP n 1 90 ALA n 1 91 TYR n 1 92 THR n 1 93 VAL n 1 94 LEU n 1 95 PHE n 1 96 ASP n 1 97 LYS n 1 98 ALA n 1 99 GLU n 1 100 ASP n 1 101 MSE n 1 102 GLU n 1 103 MSE n 1 104 GLU n 1 105 LYS n 1 106 ASP n 1 107 THR n 1 108 GLY n 1 109 LEU n 1 110 THR n 1 111 SER n 1 112 VAL n 1 113 LYS n 1 114 ILE n 1 115 GLU n 1 116 TRP n 1 117 ILE n 1 118 TYR n 1 119 LEU n 1 120 LYS n 1 121 LYS n 1 122 GLY n 1 123 LYS n 1 124 ILE n 1 125 LYS n 1 126 ARG n 1 127 TYR n 1 128 TYR n 1 129 PHE n 1 130 GLU n 1 131 ARG n 1 132 LEU n 1 133 LYS n 1 134 GLY n 1 135 LEU n 1 136 TRP n 1 137 LYS n 1 138 LEU n 1 139 GLU n 1 140 ALA n 1 141 ILE n 1 142 ASP n 1 143 PHE n 1 144 ALA n 1 145 ASP n 1 146 MSE n 1 147 PRO n 1 148 ARG n 1 149 GLU n 1 150 ASP n 1 151 THR n 1 152 GLY n 1 153 LYS n 1 154 GLU n 1 155 ASP n 1 156 PHE n 1 157 PHE n 1 158 GLU n 1 159 PHE n 1 160 TYR n 1 161 GLU n 1 162 ARG n 1 163 PHE n 1 164 ALA n 1 165 ASN n 1 166 ASP n 1 167 SER n 1 168 VAL n 1 169 PHE n 1 170 GLN n 1 171 LEU n 1 172 SER n 1 173 ARG n 1 174 LEU n 1 175 HIS n 1 176 GLU n 1 177 PRO n 1 178 LEU n 1 179 LYS n 1 180 PHE n 1 181 VAL n 1 182 THR n 1 183 ALA n 1 184 ASP n 1 185 PRO n 1 186 GLU n 1 187 ASP n 1 188 GLU n 1 189 PHE n 1 190 GLN n 1 191 ILE n 1 192 LEU n 1 193 GLU n 1 194 THR n 1 195 THR n 1 196 LEU n 1 197 GLU n 1 198 ALA n 1 199 GLY n 1 200 GLN n 1 201 TRP n 1 202 PHE n 1 203 ALA n 1 204 PHE n 1 205 GLN n 1 206 PRO n 1 207 VAL n 1 208 LEU n 1 209 PRO n 1 210 ARG n 1 211 GLU n 1 212 ASN n 1 213 LEU n 1 214 THR n 1 215 ASN n 1 216 VAL n 1 217 ASN n 1 218 TYR n 1 219 GLY n 1 220 GLN n 1 221 ASN n 1 222 GLU n 1 223 ASN n 1 224 VAL n 1 225 HIS n 1 226 SER n 1 227 ASN n 1 228 THR n 1 229 LYS n 1 230 VAL n 1 231 ILE n 1 232 GLU n 1 233 MSE n 1 234 LYS n 1 235 GLY n 1 236 PHE n 1 237 GLY n 1 238 ASN n 1 239 GLY n 1 240 PHE n 1 241 ASN n 1 242 ASN n 1 243 THR n 1 244 LEU n 1 245 TYR n 1 246 PHE n 1 247 GLU n 1 248 ARG n 1 249 ARG n 1 250 HIS n 1 251 GLY n 1 252 LEU n 1 253 TRP n 1 254 LYS n 1 255 LEU n 1 256 MSE n 1 257 GLN n 1 258 PHE n 1 259 GLU n 1 260 ASP n 1 261 LEU n 1 262 SER n 1 263 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BVU_2238, YP_001299520.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 8482' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacteroides vulgatus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 435590 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A6L2I4_BACV8 _struct_ref.pdbx_db_accession A6L2I4 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DPFETLTEEIDSLTAPPDTTEAMAAVEEEPMVPATADESFADFFYNFASDEKLQLSRIVFPLPYYTMEKKEHIEKDQWKH DPLFSRQDAYTVLFDKAEDMEMEKDTGLTSVKIEWIYLKKGKIKRYYFERLKGLWKLEAIDFADMPREDTGKEDFFEFYE RFANDSVFQLSRLHEPLKFVTADPEDEFQILETTLEAGQWFAFQPVLPRENLTNVNYGQNENVHSNTKVIEMKGFGNGFN NTLYFERRHGLWKLMQFEDLSD ; _struct_ref.pdbx_align_begin 25 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MJF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 263 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A6L2I4 _struct_ref_seq.db_align_beg 25 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 286 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 25 _struct_ref_seq.pdbx_auth_seq_align_end 286 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4MJF _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code A6L2I4 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CXS non-polymer . '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' ? 'C9 H19 N O3 S' 221.317 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4MJF # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 2.43 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 49.30 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 10.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.pdbx_details ;0.200M lithium sulfate, 2.00M ammonium sulfate, 0.200M sodium thiocyanate, 0.1M CAPS pH 10.5, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.crystal_id 1 _diffrn.ambient_temp_details ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.details 'Flat mirror (vertical focusing); single crystal Si(111) bent monochromator (horizontal focusing)' _diffrn_detector.pdbx_collection_date 2013-07-02 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'single crystal Si(111) bent' _diffrn_radiation.pdbx_diffrn_protocol SAD _diffrn_radiation.pdbx_scattering_type x-ray _diffrn_radiation.wavelength_id 1 # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97879 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline BL11-1 _diffrn_source.type 'SSRL BEAMLINE BL11-1' _diffrn_source.pdbx_wavelength 0.97879 _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_wavelength_list ? # _reflns.entry_id 4MJF _reflns.d_resolution_high 1.99 _reflns.d_resolution_low 48.085 _reflns.pdbx_number_measured_all 67280 _reflns.number_obs 20233 _reflns.pdbx_Rmerge_I_obs 0.037 _reflns.pdbx_netI_over_sigmaI 15.210 _reflns.percent_possible_obs 97.600 _reflns.B_iso_Wilson_estimate 44.225 _reflns.Rmerge_F_obs 0.999 _reflns.observed_criterion_sigma_I -3.000 _reflns.pdbx_Rrim_I_all 0.044 _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 _reflns.number_all ? _reflns.observed_criterion_sigma_F ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.990 2.060 6720 ? 1999 ? 0.562 2.1 ? ? ? ? ? 2020 ? ? 0.728 ? ? 99.000 0.669 ? 1 1 2.060 2.140 6789 ? 1976 ? 0.408 3.0 ? ? ? ? ? 1998 ? ? 0.851 ? ? 98.900 0.484 ? 2 1 2.140 2.240 6989 ? 2082 ? 0.273 4.3 ? ? ? ? ? 2117 ? ? 0.924 ? ? 98.300 0.326 ? 3 1 2.240 2.360 6599 ? 2054 ? 0.180 6.3 ? ? ? ? ? 2112 ? ? 0.961 ? ? 97.300 0.217 ? 4 1 2.360 2.510 7183 ? 2071 ? 0.113 9.8 ? ? ? ? ? 2097 ? ? 0.986 ? ? 98.800 0.134 ? 5 1 2.510 2.700 6617 ? 1958 ? 0.076 13.5 ? ? ? ? ? 2009 ? ? 0.993 ? ? 97.500 0.090 ? 6 1 2.700 2.970 6486 ? 1977 ? 0.049 19.1 ? ? ? ? ? 2052 ? ? 0.997 ? ? 96.300 0.059 ? 7 1 2.970 3.400 6853 ? 2025 ? 0.033 26.5 ? ? ? ? ? 2072 ? ? 0.999 ? ? 97.700 0.039 ? 8 1 3.400 4.270 6529 ? 1992 ? 0.025 33.0 ? ? ? ? ? 2064 ? ? 0.999 ? ? 96.500 0.029 ? 9 1 4.270 ? 6515 ? 2059 ? 0.030 34.7 ? ? ? ? ? 2146 ? ? 0.998 ? ? 95.900 0.036 ? 10 1 # _refine.entry_id 4MJF _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_d_res_high 1.9900 _refine.ls_d_res_low 48.085 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 97.8100 _refine.ls_number_reflns_obs 20230 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.ls_matrix_type ? _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;1.A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 3.ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 4.SULFATE (SO4), CAPS (CXS), CHLORIDE (CL) AND 1,2-ETHANEDIOL (EDO) FROM THE CRYSTALLIZATION AND CRYOPROTECTANT SOLUTION HAVE BEEN MODELED. 5.RESIDUES 173-174 ARE IN A REGION OF ELECTRON DENSITY THAT IS NOT WELL-DEFINED. ; _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1926 _refine.ls_R_factor_R_work 0.1911 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2196 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1100 _refine.ls_number_reflns_R_free 1034 _refine.ls_number_reflns_R_work ? _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 55.0599 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.1259 _refine.aniso_B[2][2] 1.0088 _refine.aniso_B[3][3] -1.1348 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 1.3610 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9586 _refine.correlation_coeff_Fo_to_Fc_free 0.9526 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.overall_SU_B ? _refine.solvent_model_details ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 145.030 _refine.B_iso_min 31.850 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.300 _refine.pdbx_diffrn_id 1 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4MJF _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.Luzzati_coordinate_error_obs 0.317 _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1892 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.number_atoms_solvent 123 _refine_hist.number_atoms_total 2087 _refine_hist.d_res_high 1.9900 _refine_hist.d_res_low 48.085 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' t_dihedral_angle_d 944 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 61 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 286 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 2039 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 239 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 2310 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 2039 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 2751 1.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.610 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 2.870 ? ? ? # _refine_ls_shell.d_res_high 1.9900 _refine_ls_shell.d_res_low 2.1000 _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.percent_reflns_obs 97.8100 _refine_ls_shell.number_reflns_R_work 2834 _refine_ls_shell.R_factor_all 0.2092 _refine_ls_shell.R_factor_R_work 0.2089 _refine_ls_shell.R_factor_R_free 0.2152 _refine_ls_shell.percent_reflns_R_free 5.3400 _refine_ls_shell.number_reflns_R_free 160 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2994 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.title 'Crystal structure of a DUF4348 family protein (BVU_2238) from Bacteroides vulgatus ATCC 8482 at 1.99 A resolution' _struct.entry_id 4MJF _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.text ;PF14254 family, DUF4348, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION ; _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.entry_id 4MJF # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? J N N 4 ? K N N 4 ? L N N 4 ? M N N 5 ? N N N 5 ? O N N 5 ? P N N 5 ? Q N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 40 ? ASP A 51 ? SER A 63 ASP A 74 1 ? 12 HELX_P HELX_P2 2 ASP A 51 ? ARG A 58 ? ASP A 74 ARG A 81 1 ? 8 HELX_P HELX_P3 3 GLU A 75 ? TRP A 79 ? GLU A 98 TRP A 102 5 ? 5 HELX_P HELX_P4 4 LYS A 97 ? GLU A 102 ? LYS A 120 GLU A 125 5 ? 6 HELX_P HELX_P5 5 ASP A 155 ? ASP A 166 ? ASP A 178 ASP A 189 1 ? 12 HELX_P HELX_P6 6 ASP A 166 ? ARG A 173 ? ASP A 189 ARG A 196 1 ? 8 HELX_P HELX_P7 7 GLU A 197 ? GLN A 205 ? GLU A 220 GLN A 228 1 ? 9 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A THR 67 C ? ? ? 1_555 A MSE 68 N ? ? A THR 90 A MSE 91 1_555 ? ? ? ? ? ? ? 1.339 ? ? covale2 covale both ? A MSE 68 C ? ? ? 1_555 A GLU 69 N ? ? A MSE 91 A GLU 92 1_555 ? ? ? ? ? ? ? 1.345 ? ? covale3 covale both ? A ASP 100 C ? ? ? 1_555 A MSE 101 N ? ? A ASP 123 A MSE 124 1_555 ? ? ? ? ? ? ? 1.356 ? ? covale4 covale both ? A MSE 101 C ? ? ? 1_555 A GLU 102 N ? ? A MSE 124 A GLU 125 1_555 ? ? ? ? ? ? ? 1.348 ? ? covale5 covale both ? A GLU 102 C ? ? ? 1_555 A MSE 103 N ? ? A GLU 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.354 ? ? covale6 covale both ? A ASP 145 C ? ? ? 1_555 A MSE 146 N ? ? A ASP 168 A MSE 169 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale7 covale both ? A MSE 146 C ? ? ? 1_555 A PRO 147 N ? ? A MSE 169 A PRO 170 1_555 ? ? ? ? ? ? ? 1.358 ? ? covale8 covale both ? A GLU 232 C ? ? ? 1_555 A MSE 233 N ? ? A GLU 255 A MSE 256 1_555 ? ? ? ? ? ? ? 1.338 ? ? covale9 covale both ? A MSE 233 C ? ? ? 1_555 A LYS 234 N ? ? A MSE 256 A LYS 257 1_555 ? ? ? ? ? ? ? 1.353 ? ? covale10 covale both ? A LEU 255 C ? ? ? 1_555 A MSE 256 N ? ? A LEU 278 A MSE 279 1_555 ? ? ? ? ? ? ? 1.343 ? ? covale11 covale both ? A MSE 256 C ? ? ? 1_555 A GLN 257 N ? ? A MSE 279 A GLN 280 1_555 ? ? ? ? ? ? ? 1.341 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 PHE 61 A . ? PHE 84 A PRO 62 A ? PRO 85 A 1 0.17 2 GLU 176 A . ? GLU 199 A PRO 177 A ? PRO 200 A 1 3.71 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 70 ? ILE A 74 ? LYS A 93 ILE A 97 A 2 LEU A 63 ? THR A 67 ? LEU A 86 THR A 90 A 3 LEU A 135 ? ASP A 145 ? LEU A 158 ASP A 168 A 4 LYS A 123 ? LEU A 132 ? LYS A 146 LEU A 155 A 5 SER A 111 ? TYR A 118 ? SER A 134 TYR A 141 A 6 ASN A 212 ? ASN A 217 ? ASN A 235 ASN A 240 B 1 ALA A 90 ? PHE A 95 ? ALA A 113 PHE A 118 B 2 THR A 228 ? GLY A 235 ? THR A 251 GLY A 258 B 3 ASN A 241 ? ARG A 249 ? ASN A 264 ARG A 272 B 4 LEU A 252 ? ASP A 260 ? LEU A 275 ASP A 283 B 5 LEU A 174 ? ALA A 183 ? LEU A 197 ALA A 206 B 6 ILE A 191 ? LEU A 196 ? ILE A 214 LEU A 219 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 72 ? O GLU A 95 N TYR A 65 ? N TYR A 88 A 2 3 N TYR A 66 ? N TYR A 89 O ILE A 141 ? O ILE A 164 A 3 4 O LEU A 135 ? O LEU A 158 N LEU A 132 ? N LEU A 155 A 4 5 O LYS A 123 ? O LYS A 146 N TYR A 118 ? N TYR A 141 A 5 6 N ILE A 117 ? N ILE A 140 O LEU A 213 ? O LEU A 236 B 1 2 N TYR A 91 ? N TYR A 114 O LYS A 234 ? O LYS A 257 B 2 3 N MSE A 233 ? N MSE A 256 O ASN A 242 ? O ASN A 265 B 3 4 N THR A 243 ? N THR A 266 O GLU A 259 ? O GLU A 282 B 4 5 O ASP A 260 ? O ASP A 283 N VAL A 181 ? N VAL A 204 B 5 6 N THR A 182 ? N THR A 205 O LEU A 192 ? O LEU A 215 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CXS 300 ? 7 'BINDING SITE FOR RESIDUE CXS A 300' AC2 Software A CXS 301 ? 5 'BINDING SITE FOR RESIDUE CXS A 301' AC3 Software A SO4 302 ? 5 'BINDING SITE FOR RESIDUE SO4 A 302' AC4 Software A SO4 303 ? 6 'BINDING SITE FOR RESIDUE SO4 A 303' AC5 Software A SO4 304 ? 7 'BINDING SITE FOR RESIDUE SO4 A 304' AC6 Software A SO4 305 ? 3 'BINDING SITE FOR RESIDUE SO4 A 305' AC7 Software A EDO 306 ? 8 'BINDING SITE FOR RESIDUE EDO A 306' AC8 Software A EDO 307 ? 5 'BINDING SITE FOR RESIDUE EDO A 307' AC9 Software A EDO 308 ? 3 'BINDING SITE FOR RESIDUE EDO A 308' BC1 Software A EDO 309 ? 5 'BINDING SITE FOR RESIDUE EDO A 309' BC2 Software A EDO 310 ? 1 'BINDING SITE FOR RESIDUE EDO A 310' BC3 Software A CL 311 ? 1 'BINDING SITE FOR RESIDUE CL A 311' BC4 Software A CL 312 ? 1 'BINDING SITE FOR RESIDUE CL A 312' BC5 Software A CL 313 ? 2 'BINDING SITE FOR RESIDUE CL A 313' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 PHE A 85 ? PHE A 108 . ? 1_555 ? 2 AC1 7 TYR A 91 ? TYR A 114 . ? 1_555 ? 3 AC1 7 PHE A 236 ? PHE A 259 . ? 1_555 ? 4 AC1 7 GLY A 237 ? GLY A 260 . ? 1_555 ? 5 AC1 7 EDO L . ? EDO A 310 . ? 1_555 ? 6 AC1 7 HOH Q . ? HOH A 444 . ? 1_555 ? 7 AC1 7 HOH Q . ? HOH A 497 . ? 1_555 ? 8 AC2 5 TYR A 66 ? TYR A 89 . ? 1_555 ? 9 AC2 5 ARG A 126 ? ARG A 149 . ? 1_555 ? 10 AC2 5 GLU A 130 ? GLU A 153 . ? 2_656 ? 11 AC2 5 ASP A 142 ? ASP A 165 . ? 1_555 ? 12 AC2 5 ALA A 144 ? ALA A 167 . ? 1_555 ? 13 AC3 5 ARG A 249 ? ARG A 272 . ? 1_555 ? 14 AC3 5 HIS A 250 ? HIS A 273 . ? 1_555 ? 15 AC3 5 HOH Q . ? HOH A 401 . ? 1_555 ? 16 AC3 5 HOH Q . ? HOH A 435 . ? 1_555 ? 17 AC3 5 HOH Q . ? HOH A 492 . ? 3_545 ? 18 AC4 6 LEU A 135 ? LEU A 158 . ? 3_545 ? 19 AC4 6 LYS A 153 ? LYS A 176 . ? 1_555 ? 20 AC4 6 ASN A 227 ? ASN A 250 . ? 1_555 ? 21 AC4 6 ARG A 248 ? ARG A 271 . ? 1_555 ? 22 AC4 6 HOH Q . ? HOH A 440 . ? 1_555 ? 23 AC4 6 HOH Q . ? HOH A 481 . ? 1_555 ? 24 AC5 7 LYS A 53 ? LYS A 76 . ? 3_545 ? 25 AC5 7 GLU A 154 ? GLU A 177 . ? 1_555 ? 26 AC5 7 GLU A 158 ? GLU A 181 . ? 1_555 ? 27 AC5 7 PHE A 159 ? PHE A 182 . ? 1_555 ? 28 AC5 7 ARG A 162 ? ARG A 185 . ? 1_555 ? 29 AC5 7 PHE A 169 ? PHE A 192 . ? 1_555 ? 30 AC5 7 HOH Q . ? HOH A 453 . ? 3_545 ? 31 AC6 3 ARG A 210 ? ARG A 233 . ? 1_555 ? 32 AC6 3 GLU A 211 ? GLU A 234 . ? 1_555 ? 33 AC6 3 ASN A 212 ? ASN A 235 . ? 1_555 ? 34 AC7 8 LEU A 94 ? LEU A 117 . ? 1_555 ? 35 AC7 8 PHE A 95 ? PHE A 118 . ? 1_555 ? 36 AC7 8 ASP A 96 ? ASP A 119 . ? 1_555 ? 37 AC7 8 ASN A 215 ? ASN A 238 . ? 1_555 ? 38 AC7 8 GLN A 220 ? GLN A 243 . ? 1_555 ? 39 AC7 8 ASN A 221 ? ASN A 244 . ? 1_555 ? 40 AC7 8 GLU A 222 ? GLU A 245 . ? 1_555 ? 41 AC7 8 LYS A 229 ? LYS A 252 . ? 1_555 ? 42 AC8 5 PHE A 45 ? PHE A 68 . ? 1_555 ? 43 AC8 5 TYR A 46 ? TYR A 69 . ? 1_555 ? 44 AC8 5 SER A 86 ? SER A 109 . ? 1_555 ? 45 AC8 5 PHE A 236 ? PHE A 259 . ? 1_555 ? 46 AC8 5 HOH Q . ? HOH A 444 . ? 1_555 ? 47 AC9 3 GLU A 176 ? GLU A 199 . ? 1_555 ? 48 AC9 3 HOH Q . ? HOH A 435 . ? 1_555 ? 49 AC9 3 HOH Q . ? HOH A 449 . ? 1_555 ? 50 BC1 5 LYS A 113 ? LYS A 136 . ? 1_555 ? 51 BC1 5 ASN A 217 ? ASN A 240 . ? 1_555 ? 52 BC1 5 GLN A 220 ? GLN A 243 . ? 1_555 ? 53 BC1 5 GLU A 222 ? GLU A 245 . ? 1_555 ? 54 BC1 5 HOH Q . ? HOH A 427 . ? 1_555 ? 55 BC2 1 CXS B . ? CXS A 300 . ? 1_555 ? 56 BC3 1 HIS A 175 ? HIS A 198 . ? 1_555 ? 57 BC4 1 HIS A 250 ? HIS A 273 . ? 1_555 ? 58 BC5 2 GLY A 199 ? GLY A 222 . ? 1_555 ? 59 BC5 2 GLY A 199 ? GLY A 222 . ? 2_655 ? # _atom_sites.entry_id 4MJF _atom_sites.fract_transf_matrix[1][1] 0.015451 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000623 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013906 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015279 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 ? ? ? A . n A 1 2 ASP 2 25 ? ? ? A . n A 1 3 PRO 3 26 ? ? ? A . n A 1 4 PHE 4 27 ? ? ? A . n A 1 5 GLU 5 28 ? ? ? A . n A 1 6 THR 6 29 ? ? ? A . n A 1 7 LEU 7 30 ? ? ? A . n A 1 8 THR 8 31 ? ? ? A . n A 1 9 GLU 9 32 ? ? ? A . n A 1 10 GLU 10 33 ? ? ? A . n A 1 11 ILE 11 34 ? ? ? A . n A 1 12 ASP 12 35 ? ? ? A . n A 1 13 SER 13 36 ? ? ? A . n A 1 14 LEU 14 37 ? ? ? A . n A 1 15 THR 15 38 ? ? ? A . n A 1 16 ALA 16 39 ? ? ? A . n A 1 17 PRO 17 40 ? ? ? A . n A 1 18 PRO 18 41 ? ? ? A . n A 1 19 ASP 19 42 ? ? ? A . n A 1 20 THR 20 43 ? ? ? A . n A 1 21 THR 21 44 ? ? ? A . n A 1 22 GLU 22 45 ? ? ? A . n A 1 23 ALA 23 46 ? ? ? A . n A 1 24 MSE 24 47 ? ? ? A . n A 1 25 ALA 25 48 ? ? ? A . n A 1 26 ALA 26 49 ? ? ? A . n A 1 27 VAL 27 50 ? ? ? A . n A 1 28 GLU 28 51 ? ? ? A . n A 1 29 GLU 29 52 ? ? ? A . n A 1 30 GLU 30 53 ? ? ? A . n A 1 31 PRO 31 54 ? ? ? A . n A 1 32 MSE 32 55 ? ? ? A . n A 1 33 VAL 33 56 ? ? ? A . n A 1 34 PRO 34 57 ? ? ? A . n A 1 35 ALA 35 58 ? ? ? A . n A 1 36 THR 36 59 ? ? ? A . n A 1 37 ALA 37 60 60 ALA ALA A . n A 1 38 ASP 38 61 61 ASP ASP A . n A 1 39 GLU 39 62 62 GLU GLU A . n A 1 40 SER 40 63 63 SER SER A . n A 1 41 PHE 41 64 64 PHE PHE A . n A 1 42 ALA 42 65 65 ALA ALA A . n A 1 43 ASP 43 66 66 ASP ASP A . n A 1 44 PHE 44 67 67 PHE PHE A . n A 1 45 PHE 45 68 68 PHE PHE A . n A 1 46 TYR 46 69 69 TYR TYR A . n A 1 47 ASN 47 70 70 ASN ASN A . n A 1 48 PHE 48 71 71 PHE PHE A . n A 1 49 ALA 49 72 72 ALA ALA A . n A 1 50 SER 50 73 73 SER SER A . n A 1 51 ASP 51 74 74 ASP ASP A . n A 1 52 GLU 52 75 75 GLU GLU A . n A 1 53 LYS 53 76 76 LYS LYS A . n A 1 54 LEU 54 77 77 LEU LEU A . n A 1 55 GLN 55 78 78 GLN GLN A . n A 1 56 LEU 56 79 79 LEU LEU A . n A 1 57 SER 57 80 80 SER SER A . n A 1 58 ARG 58 81 81 ARG ARG A . n A 1 59 ILE 59 82 82 ILE ILE A . n A 1 60 VAL 60 83 83 VAL VAL A . n A 1 61 PHE 61 84 84 PHE PHE A . n A 1 62 PRO 62 85 85 PRO PRO A . n A 1 63 LEU 63 86 86 LEU LEU A . n A 1 64 PRO 64 87 87 PRO PRO A . n A 1 65 TYR 65 88 88 TYR TYR A . n A 1 66 TYR 66 89 89 TYR TYR A . n A 1 67 THR 67 90 90 THR THR A . n A 1 68 MSE 68 91 91 MSE MSE A . n A 1 69 GLU 69 92 92 GLU GLU A . n A 1 70 LYS 70 93 93 LYS LYS A . n A 1 71 LYS 71 94 94 LYS LYS A . n A 1 72 GLU 72 95 95 GLU GLU A . n A 1 73 HIS 73 96 96 HIS HIS A . n A 1 74 ILE 74 97 97 ILE ILE A . n A 1 75 GLU 75 98 98 GLU GLU A . n A 1 76 LYS 76 99 99 LYS LYS A . n A 1 77 ASP 77 100 100 ASP ASP A . n A 1 78 GLN 78 101 101 GLN GLN A . n A 1 79 TRP 79 102 102 TRP TRP A . n A 1 80 LYS 80 103 103 LYS LYS A . n A 1 81 HIS 81 104 104 HIS HIS A . n A 1 82 ASP 82 105 105 ASP ASP A . n A 1 83 PRO 83 106 106 PRO PRO A . n A 1 84 LEU 84 107 107 LEU LEU A . n A 1 85 PHE 85 108 108 PHE PHE A . n A 1 86 SER 86 109 109 SER SER A . n A 1 87 ARG 87 110 110 ARG ARG A . n A 1 88 GLN 88 111 111 GLN GLN A . n A 1 89 ASP 89 112 112 ASP ASP A . n A 1 90 ALA 90 113 113 ALA ALA A . n A 1 91 TYR 91 114 114 TYR TYR A . n A 1 92 THR 92 115 115 THR THR A . n A 1 93 VAL 93 116 116 VAL VAL A . n A 1 94 LEU 94 117 117 LEU LEU A . n A 1 95 PHE 95 118 118 PHE PHE A . n A 1 96 ASP 96 119 119 ASP ASP A . n A 1 97 LYS 97 120 120 LYS LYS A . n A 1 98 ALA 98 121 121 ALA ALA A . n A 1 99 GLU 99 122 122 GLU GLU A . n A 1 100 ASP 100 123 123 ASP ASP A . n A 1 101 MSE 101 124 124 MSE MSE A . n A 1 102 GLU 102 125 125 GLU GLU A . n A 1 103 MSE 103 126 126 MSE MSE A . n A 1 104 GLU 104 127 ? ? ? A . n A 1 105 LYS 105 128 ? ? ? A . n A 1 106 ASP 106 129 129 ASP ASP A . n A 1 107 THR 107 130 130 THR THR A . n A 1 108 GLY 108 131 131 GLY GLY A . n A 1 109 LEU 109 132 132 LEU LEU A . n A 1 110 THR 110 133 133 THR THR A . n A 1 111 SER 111 134 134 SER SER A . n A 1 112 VAL 112 135 135 VAL VAL A . n A 1 113 LYS 113 136 136 LYS LYS A . n A 1 114 ILE 114 137 137 ILE ILE A . n A 1 115 GLU 115 138 138 GLU GLU A . n A 1 116 TRP 116 139 139 TRP TRP A . n A 1 117 ILE 117 140 140 ILE ILE A . n A 1 118 TYR 118 141 141 TYR TYR A . n A 1 119 LEU 119 142 142 LEU LEU A . n A 1 120 LYS 120 143 143 LYS LYS A . n A 1 121 LYS 121 144 144 LYS LYS A . n A 1 122 GLY 122 145 145 GLY GLY A . n A 1 123 LYS 123 146 146 LYS LYS A . n A 1 124 ILE 124 147 147 ILE ILE A . n A 1 125 LYS 125 148 148 LYS LYS A . n A 1 126 ARG 126 149 149 ARG ARG A . n A 1 127 TYR 127 150 150 TYR TYR A . n A 1 128 TYR 128 151 151 TYR TYR A . n A 1 129 PHE 129 152 152 PHE PHE A . n A 1 130 GLU 130 153 153 GLU GLU A . n A 1 131 ARG 131 154 154 ARG ARG A . n A 1 132 LEU 132 155 155 LEU LEU A . n A 1 133 LYS 133 156 156 LYS LYS A . n A 1 134 GLY 134 157 157 GLY GLY A . n A 1 135 LEU 135 158 158 LEU LEU A . n A 1 136 TRP 136 159 159 TRP TRP A . n A 1 137 LYS 137 160 160 LYS LYS A . n A 1 138 LEU 138 161 161 LEU LEU A . n A 1 139 GLU 139 162 162 GLU GLU A . n A 1 140 ALA 140 163 163 ALA ALA A . n A 1 141 ILE 141 164 164 ILE ILE A . n A 1 142 ASP 142 165 165 ASP ASP A . n A 1 143 PHE 143 166 166 PHE PHE A . n A 1 144 ALA 144 167 167 ALA ALA A . n A 1 145 ASP 145 168 168 ASP ASP A . n A 1 146 MSE 146 169 169 MSE MSE A . n A 1 147 PRO 147 170 170 PRO PRO A . n A 1 148 ARG 148 171 171 ARG ARG A . n A 1 149 GLU 149 172 172 GLU GLU A . n A 1 150 ASP 150 173 173 ASP ASP A . n A 1 151 THR 151 174 174 THR THR A . n A 1 152 GLY 152 175 175 GLY GLY A . n A 1 153 LYS 153 176 176 LYS LYS A . n A 1 154 GLU 154 177 177 GLU GLU A . n A 1 155 ASP 155 178 178 ASP ASP A . n A 1 156 PHE 156 179 179 PHE PHE A . n A 1 157 PHE 157 180 180 PHE PHE A . n A 1 158 GLU 158 181 181 GLU GLU A . n A 1 159 PHE 159 182 182 PHE PHE A . n A 1 160 TYR 160 183 183 TYR TYR A . n A 1 161 GLU 161 184 184 GLU GLU A . n A 1 162 ARG 162 185 185 ARG ARG A . n A 1 163 PHE 163 186 186 PHE PHE A . n A 1 164 ALA 164 187 187 ALA ALA A . n A 1 165 ASN 165 188 188 ASN ASN A . n A 1 166 ASP 166 189 189 ASP ASP A . n A 1 167 SER 167 190 190 SER SER A . n A 1 168 VAL 168 191 191 VAL VAL A . n A 1 169 PHE 169 192 192 PHE PHE A . n A 1 170 GLN 170 193 193 GLN GLN A . n A 1 171 LEU 171 194 194 LEU LEU A . n A 1 172 SER 172 195 195 SER SER A . n A 1 173 ARG 173 196 196 ARG ARG A . n A 1 174 LEU 174 197 197 LEU LEU A . n A 1 175 HIS 175 198 198 HIS HIS A . n A 1 176 GLU 176 199 199 GLU GLU A . n A 1 177 PRO 177 200 200 PRO PRO A . n A 1 178 LEU 178 201 201 LEU LEU A . n A 1 179 LYS 179 202 202 LYS LYS A . n A 1 180 PHE 180 203 203 PHE PHE A . n A 1 181 VAL 181 204 204 VAL VAL A . n A 1 182 THR 182 205 205 THR THR A . n A 1 183 ALA 183 206 206 ALA ALA A . n A 1 184 ASP 184 207 207 ASP ASP A . n A 1 185 PRO 185 208 208 PRO PRO A . n A 1 186 GLU 186 209 209 GLU GLU A . n A 1 187 ASP 187 210 210 ASP ASP A . n A 1 188 GLU 188 211 211 GLU GLU A . n A 1 189 PHE 189 212 212 PHE PHE A . n A 1 190 GLN 190 213 213 GLN GLN A . n A 1 191 ILE 191 214 214 ILE ILE A . n A 1 192 LEU 192 215 215 LEU LEU A . n A 1 193 GLU 193 216 216 GLU GLU A . n A 1 194 THR 194 217 217 THR THR A . n A 1 195 THR 195 218 218 THR THR A . n A 1 196 LEU 196 219 219 LEU LEU A . n A 1 197 GLU 197 220 220 GLU GLU A . n A 1 198 ALA 198 221 221 ALA ALA A . n A 1 199 GLY 199 222 222 GLY GLY A . n A 1 200 GLN 200 223 223 GLN GLN A . n A 1 201 TRP 201 224 224 TRP TRP A . n A 1 202 PHE 202 225 225 PHE PHE A . n A 1 203 ALA 203 226 226 ALA ALA A . n A 1 204 PHE 204 227 227 PHE PHE A . n A 1 205 GLN 205 228 228 GLN GLN A . n A 1 206 PRO 206 229 229 PRO PRO A . n A 1 207 VAL 207 230 230 VAL VAL A . n A 1 208 LEU 208 231 231 LEU LEU A . n A 1 209 PRO 209 232 232 PRO PRO A . n A 1 210 ARG 210 233 233 ARG ARG A . n A 1 211 GLU 211 234 234 GLU GLU A . n A 1 212 ASN 212 235 235 ASN ASN A . n A 1 213 LEU 213 236 236 LEU LEU A . n A 1 214 THR 214 237 237 THR THR A . n A 1 215 ASN 215 238 238 ASN ASN A . n A 1 216 VAL 216 239 239 VAL VAL A . n A 1 217 ASN 217 240 240 ASN ASN A . n A 1 218 TYR 218 241 241 TYR TYR A . n A 1 219 GLY 219 242 242 GLY GLY A . n A 1 220 GLN 220 243 243 GLN GLN A . n A 1 221 ASN 221 244 244 ASN ASN A . n A 1 222 GLU 222 245 245 GLU GLU A . n A 1 223 ASN 223 246 246 ASN ASN A . n A 1 224 VAL 224 247 247 VAL VAL A . n A 1 225 HIS 225 248 248 HIS HIS A . n A 1 226 SER 226 249 249 SER SER A . n A 1 227 ASN 227 250 250 ASN ASN A . n A 1 228 THR 228 251 251 THR THR A . n A 1 229 LYS 229 252 252 LYS LYS A . n A 1 230 VAL 230 253 253 VAL VAL A . n A 1 231 ILE 231 254 254 ILE ILE A . n A 1 232 GLU 232 255 255 GLU GLU A . n A 1 233 MSE 233 256 256 MSE MSE A . n A 1 234 LYS 234 257 257 LYS LYS A . n A 1 235 GLY 235 258 258 GLY GLY A . n A 1 236 PHE 236 259 259 PHE PHE A . n A 1 237 GLY 237 260 260 GLY GLY A . n A 1 238 ASN 238 261 261 ASN ASN A . n A 1 239 GLY 239 262 262 GLY GLY A . n A 1 240 PHE 240 263 263 PHE PHE A . n A 1 241 ASN 241 264 264 ASN ASN A . n A 1 242 ASN 242 265 265 ASN ASN A . n A 1 243 THR 243 266 266 THR THR A . n A 1 244 LEU 244 267 267 LEU LEU A . n A 1 245 TYR 245 268 268 TYR TYR A . n A 1 246 PHE 246 269 269 PHE PHE A . n A 1 247 GLU 247 270 270 GLU GLU A . n A 1 248 ARG 248 271 271 ARG ARG A . n A 1 249 ARG 249 272 272 ARG ARG A . n A 1 250 HIS 250 273 273 HIS HIS A . n A 1 251 GLY 251 274 274 GLY GLY A . n A 1 252 LEU 252 275 275 LEU LEU A . n A 1 253 TRP 253 276 276 TRP TRP A . n A 1 254 LYS 254 277 277 LYS LYS A . n A 1 255 LEU 255 278 278 LEU LEU A . n A 1 256 MSE 256 279 279 MSE MSE A . n A 1 257 GLN 257 280 280 GLN GLN A . n A 1 258 PHE 258 281 281 PHE PHE A . n A 1 259 GLU 259 282 282 GLU GLU A . n A 1 260 ASP 260 283 283 ASP ASP A . n A 1 261 LEU 261 284 284 LEU LEU A . n A 1 262 SER 262 285 285 SER SER A . n A 1 263 ASP 263 286 286 ASP ASP A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CXS 1 300 300 CXS CXS A . C 2 CXS 1 301 301 CXS CXS A . D 3 SO4 1 302 302 SO4 SO4 A . E 3 SO4 1 303 303 SO4 SO4 A . F 3 SO4 1 304 304 SO4 SO4 A . G 3 SO4 1 305 305 SO4 SO4 A . H 4 EDO 1 306 306 EDO EDO A . I 4 EDO 1 307 307 EDO EDO A . J 4 EDO 1 308 308 EDO EDO A . K 4 EDO 1 309 309 EDO EDO A . L 4 EDO 1 310 310 EDO EDO A . M 5 CL 1 311 311 CL CL A . N 5 CL 1 312 312 CL CL A . O 5 CL 1 313 313 CL CL A . P 5 CL 1 314 314 CL CL A . Q 6 HOH 1 401 315 HOH HOH A . Q 6 HOH 2 402 316 HOH HOH A . Q 6 HOH 3 403 317 HOH HOH A . Q 6 HOH 4 404 318 HOH HOH A . Q 6 HOH 5 405 319 HOH HOH A . Q 6 HOH 6 406 320 HOH HOH A . Q 6 HOH 7 407 321 HOH HOH A . Q 6 HOH 8 408 322 HOH HOH A . Q 6 HOH 9 409 323 HOH HOH A . Q 6 HOH 10 410 324 HOH HOH A . Q 6 HOH 11 411 325 HOH HOH A . Q 6 HOH 12 412 326 HOH HOH A . Q 6 HOH 13 413 327 HOH HOH A . Q 6 HOH 14 414 328 HOH HOH A . Q 6 HOH 15 415 329 HOH HOH A . Q 6 HOH 16 416 330 HOH HOH A . Q 6 HOH 17 417 331 HOH HOH A . Q 6 HOH 18 418 332 HOH HOH A . Q 6 HOH 19 419 333 HOH HOH A . Q 6 HOH 20 420 334 HOH HOH A . Q 6 HOH 21 421 335 HOH HOH A . Q 6 HOH 22 422 336 HOH HOH A . Q 6 HOH 23 423 337 HOH HOH A . Q 6 HOH 24 424 338 HOH HOH A . Q 6 HOH 25 425 339 HOH HOH A . Q 6 HOH 26 426 340 HOH HOH A . Q 6 HOH 27 427 341 HOH HOH A . Q 6 HOH 28 428 342 HOH HOH A . Q 6 HOH 29 429 343 HOH HOH A . Q 6 HOH 30 430 344 HOH HOH A . Q 6 HOH 31 431 345 HOH HOH A . Q 6 HOH 32 432 346 HOH HOH A . Q 6 HOH 33 433 347 HOH HOH A . Q 6 HOH 34 434 348 HOH HOH A . Q 6 HOH 35 435 349 HOH HOH A . Q 6 HOH 36 436 350 HOH HOH A . Q 6 HOH 37 437 351 HOH HOH A . Q 6 HOH 38 438 352 HOH HOH A . Q 6 HOH 39 439 353 HOH HOH A . Q 6 HOH 40 440 354 HOH HOH A . Q 6 HOH 41 441 355 HOH HOH A . Q 6 HOH 42 442 356 HOH HOH A . Q 6 HOH 43 443 357 HOH HOH A . Q 6 HOH 44 444 358 HOH HOH A . Q 6 HOH 45 445 359 HOH HOH A . Q 6 HOH 46 446 360 HOH HOH A . Q 6 HOH 47 447 361 HOH HOH A . Q 6 HOH 48 448 362 HOH HOH A . Q 6 HOH 49 449 363 HOH HOH A . Q 6 HOH 50 450 364 HOH HOH A . Q 6 HOH 51 451 365 HOH HOH A . Q 6 HOH 52 452 366 HOH HOH A . Q 6 HOH 53 453 367 HOH HOH A . Q 6 HOH 54 454 368 HOH HOH A . Q 6 HOH 55 455 369 HOH HOH A . Q 6 HOH 56 456 370 HOH HOH A . Q 6 HOH 57 457 371 HOH HOH A . Q 6 HOH 58 458 372 HOH HOH A . Q 6 HOH 59 459 373 HOH HOH A . Q 6 HOH 60 460 374 HOH HOH A . Q 6 HOH 61 461 375 HOH HOH A . Q 6 HOH 62 462 376 HOH HOH A . Q 6 HOH 63 463 377 HOH HOH A . Q 6 HOH 64 464 378 HOH HOH A . Q 6 HOH 65 465 379 HOH HOH A . Q 6 HOH 66 466 380 HOH HOH A . Q 6 HOH 67 467 381 HOH HOH A . Q 6 HOH 68 468 382 HOH HOH A . Q 6 HOH 69 469 383 HOH HOH A . Q 6 HOH 70 470 384 HOH HOH A . Q 6 HOH 71 471 385 HOH HOH A . Q 6 HOH 72 472 386 HOH HOH A . Q 6 HOH 73 473 387 HOH HOH A . Q 6 HOH 74 474 388 HOH HOH A . Q 6 HOH 75 475 389 HOH HOH A . Q 6 HOH 76 476 390 HOH HOH A . Q 6 HOH 77 477 391 HOH HOH A . Q 6 HOH 78 478 392 HOH HOH A . Q 6 HOH 79 479 393 HOH HOH A . Q 6 HOH 80 480 394 HOH HOH A . Q 6 HOH 81 481 395 HOH HOH A . Q 6 HOH 82 482 396 HOH HOH A . Q 6 HOH 83 483 397 HOH HOH A . Q 6 HOH 84 484 398 HOH HOH A . Q 6 HOH 85 485 399 HOH HOH A . Q 6 HOH 86 486 400 HOH HOH A . Q 6 HOH 87 487 401 HOH HOH A . Q 6 HOH 88 488 402 HOH HOH A . Q 6 HOH 89 489 403 HOH HOH A . Q 6 HOH 90 490 404 HOH HOH A . Q 6 HOH 91 491 405 HOH HOH A . Q 6 HOH 92 492 406 HOH HOH A . Q 6 HOH 93 493 407 HOH HOH A . Q 6 HOH 94 494 408 HOH HOH A . Q 6 HOH 95 495 409 HOH HOH A . Q 6 HOH 96 496 410 HOH HOH A . Q 6 HOH 97 497 411 HOH HOH A . Q 6 HOH 98 498 412 HOH HOH A . Q 6 HOH 99 499 413 HOH HOH A . Q 6 HOH 100 500 414 HOH HOH A . Q 6 HOH 101 501 415 HOH HOH A . Q 6 HOH 102 502 416 HOH HOH A . Q 6 HOH 103 503 417 HOH HOH A . Q 6 HOH 104 504 418 HOH HOH A . Q 6 HOH 105 505 419 HOH HOH A . Q 6 HOH 106 506 420 HOH HOH A . Q 6 HOH 107 507 421 HOH HOH A . Q 6 HOH 108 508 422 HOH HOH A . Q 6 HOH 109 509 423 HOH HOH A . Q 6 HOH 110 510 424 HOH HOH A . Q 6 HOH 111 511 425 HOH HOH A . Q 6 HOH 112 512 426 HOH HOH A . Q 6 HOH 113 513 427 HOH HOH A . Q 6 HOH 114 514 428 HOH HOH A . Q 6 HOH 115 515 429 HOH HOH A . Q 6 HOH 116 516 430 HOH HOH A . Q 6 HOH 117 517 431 HOH HOH A . Q 6 HOH 118 518 432 HOH HOH A . Q 6 HOH 119 519 433 HOH HOH A . Q 6 HOH 120 520 434 HOH HOH A . Q 6 HOH 121 521 435 HOH HOH A . Q 6 HOH 122 522 436 HOH HOH A . Q 6 HOH 123 523 437 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 68 A MSE 91 ? MET SELENOMETHIONINE 2 A MSE 101 A MSE 124 ? MET SELENOMETHIONINE 3 A MSE 103 A MSE 126 ? MET SELENOMETHIONINE 4 A MSE 146 A MSE 169 ? MET SELENOMETHIONINE 5 A MSE 233 A MSE 256 ? MET SELENOMETHIONINE 6 A MSE 256 A MSE 279 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M,N,O,P,Q # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6540 ? 1 MORE -178 ? 1 'SSA (A^2)' 24070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 64.7190000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id CL _pdbx_struct_special_symmetry.auth_seq_id 313 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id O _pdbx_struct_special_symmetry.label_comp_id CL _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-11-13 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 28.0141 _pdbx_refine_tls.origin_y 64.2834 _pdbx_refine_tls.origin_z 17.8915 _pdbx_refine_tls.T[1][1] -0.0698 _pdbx_refine_tls.T[2][2] -0.0239 _pdbx_refine_tls.T[3][3] -0.0879 _pdbx_refine_tls.T[1][2] 0.1045 _pdbx_refine_tls.T[1][3] -0.0019 _pdbx_refine_tls.T[2][3] 0.0753 _pdbx_refine_tls.L[1][1] 0.6450 _pdbx_refine_tls.L[2][2] 2.0787 _pdbx_refine_tls.L[3][3] 2.1713 _pdbx_refine_tls.L[1][2] -0.0621 _pdbx_refine_tls.L[1][3] -0.4588 _pdbx_refine_tls.L[2][3] 1.7487 _pdbx_refine_tls.S[1][1] -0.1326 _pdbx_refine_tls.S[2][2] 0.0990 _pdbx_refine_tls.S[3][3] 0.0336 _pdbx_refine_tls.S[1][2] -0.0515 _pdbx_refine_tls.S[1][3] -0.0237 _pdbx_refine_tls.S[2][3] 0.0620 _pdbx_refine_tls.S[2][1] 0.0240 _pdbx_refine_tls.S[3][1] 0.1407 _pdbx_refine_tls.S[3][2] 0.1667 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 60 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 286 _pdbx_refine_tls_group.selection_details '{ A|60 - 286 }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method SAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE . ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT (25-286) WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4MJF _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LEU A 107 ? ? 52.55 -115.80 2 1 THR A 130 ? ? 62.82 -14.35 3 1 ASP A 173 ? ? -93.27 -158.06 4 1 GLU A 209 ? ? -116.22 -120.14 5 1 PHE A 212 ? ? 58.10 11.41 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 120 ? CG ? A LYS 97 CG 2 1 Y 1 A LYS 120 ? CD ? A LYS 97 CD 3 1 Y 1 A LYS 120 ? CE ? A LYS 97 CE 4 1 Y 1 A LYS 120 ? NZ ? A LYS 97 NZ 5 1 Y 1 A GLU 125 ? CG ? A GLU 102 CG 6 1 Y 1 A GLU 125 ? CD ? A GLU 102 CD 7 1 Y 1 A GLU 125 ? OE1 ? A GLU 102 OE1 8 1 Y 1 A GLU 125 ? OE2 ? A GLU 102 OE2 9 1 Y 1 A ASP 173 ? CG ? A ASP 150 CG 10 1 Y 1 A ASP 173 ? OD1 ? A ASP 150 OD1 11 1 Y 1 A ASP 173 ? OD2 ? A ASP 150 OD2 12 1 Y 1 A THR 174 ? OG1 ? A THR 151 OG1 13 1 Y 1 A THR 174 ? CG2 ? A THR 151 CG2 14 1 Y 1 A GLU 209 ? CG ? A GLU 186 CG 15 1 Y 1 A GLU 209 ? CD ? A GLU 186 CD 16 1 Y 1 A GLU 209 ? OE1 ? A GLU 186 OE1 17 1 Y 1 A GLU 209 ? OE2 ? A GLU 186 OE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 0 ? A GLY 1 2 1 Y 1 A ASP 25 ? A ASP 2 3 1 Y 1 A PRO 26 ? A PRO 3 4 1 Y 1 A PHE 27 ? A PHE 4 5 1 Y 1 A GLU 28 ? A GLU 5 6 1 Y 1 A THR 29 ? A THR 6 7 1 Y 1 A LEU 30 ? A LEU 7 8 1 Y 1 A THR 31 ? A THR 8 9 1 Y 1 A GLU 32 ? A GLU 9 10 1 Y 1 A GLU 33 ? A GLU 10 11 1 Y 1 A ILE 34 ? A ILE 11 12 1 Y 1 A ASP 35 ? A ASP 12 13 1 Y 1 A SER 36 ? A SER 13 14 1 Y 1 A LEU 37 ? A LEU 14 15 1 Y 1 A THR 38 ? A THR 15 16 1 Y 1 A ALA 39 ? A ALA 16 17 1 Y 1 A PRO 40 ? A PRO 17 18 1 Y 1 A PRO 41 ? A PRO 18 19 1 Y 1 A ASP 42 ? A ASP 19 20 1 Y 1 A THR 43 ? A THR 20 21 1 Y 1 A THR 44 ? A THR 21 22 1 Y 1 A GLU 45 ? A GLU 22 23 1 Y 1 A ALA 46 ? A ALA 23 24 1 Y 1 A MSE 47 ? A MSE 24 25 1 Y 1 A ALA 48 ? A ALA 25 26 1 Y 1 A ALA 49 ? A ALA 26 27 1 Y 1 A VAL 50 ? A VAL 27 28 1 Y 1 A GLU 51 ? A GLU 28 29 1 Y 1 A GLU 52 ? A GLU 29 30 1 Y 1 A GLU 53 ? A GLU 30 31 1 Y 1 A PRO 54 ? A PRO 31 32 1 Y 1 A MSE 55 ? A MSE 32 33 1 Y 1 A VAL 56 ? A VAL 33 34 1 Y 1 A PRO 57 ? A PRO 34 35 1 Y 1 A ALA 58 ? A ALA 35 36 1 Y 1 A THR 59 ? A THR 36 37 1 Y 1 A GLU 127 ? A GLU 104 38 1 Y 1 A LYS 128 ? A LYS 105 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-CYCLOHEXYL-1-PROPYLSULFONIC ACID' CXS 3 'SULFATE ION' SO4 4 1,2-ETHANEDIOL EDO 5 'CHLORIDE ION' CL 6 water HOH #