HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-SEP-13 4MJF TITLE CRYSTAL STRUCTURE OF A DUF4348 FAMILY PROTEIN (BVU_2238) FROM TITLE 2 BACTEROIDES VULGATUS ATCC 8482 AT 1.99 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES VULGATUS; SOURCE 3 ORGANISM_TAXID: 435590; SOURCE 4 STRAIN: ATCC 8482; SOURCE 5 GENE: BVU_2238, YP_001299520.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS PF14254 FAMILY, DUF4348, STRUCTURAL GENOMICS, JOINT CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, PSI- KEYWDS 3 BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4MJF 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4MJF 1 JRNL REVDAT 3 15-NOV-17 4MJF 1 REMARK REVDAT 2 24-DEC-14 4MJF 1 TITLE REVDAT 1 13-NOV-13 4MJF 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BVU_2238) FROM JRNL TITL 2 BACTEROIDES VULGATUS ATCC 8482 AT 1.99 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER-TNT 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SMART,VONRHEIN,WOMACK, REMARK 3 : MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.09 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 20230 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1034 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.10 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.81 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2994 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2092 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2834 REMARK 3 BIN R VALUE (WORKING SET) : 0.2089 REMARK 3 BIN FREE R VALUE : 0.2152 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.34 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 160 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1892 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 72 REMARK 3 SOLVENT ATOMS : 123 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 44.23 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.12590 REMARK 3 B22 (A**2) : 1.00880 REMARK 3 B33 (A**2) : -1.13480 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.36100 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.317 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : NULL REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.959 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.953 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2039 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 2751 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 944 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 61 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 286 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2039 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 239 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 2310 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.01 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.61 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.87 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: { A|60 - 286 } REMARK 3 ORIGIN FOR THE GROUP (A): 28.0141 64.2834 17.8915 REMARK 3 T TENSOR REMARK 3 T11: -0.0698 T22: -0.0239 REMARK 3 T33: -0.0879 T12: 0.1045 REMARK 3 T13: -0.0019 T23: 0.0753 REMARK 3 L TENSOR REMARK 3 L11: 0.6450 L22: 2.0787 REMARK 3 L33: 2.1713 L12: -0.0621 REMARK 3 L13: -0.4588 L23: 1.7487 REMARK 3 S TENSOR REMARK 3 S11: -0.1326 S12: -0.0515 S13: -0.0237 REMARK 3 S21: 0.0240 S22: 0.0990 S23: 0.0620 REMARK 3 S31: 0.1407 S32: 0.1667 S33: 0.0336 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.A MET-INHIBITION PROTOCOL WAS USED REMARK 3 FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. REMARK 3 THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 2.ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. 3.ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4.SULFATE (SO4), CAPS (CXS), CHLORIDE (CL) AND 1,2- REMARK 3 ETHANEDIOL (EDO) FROM THE CRYSTALLIZATION AND CRYOPROTECTANT REMARK 3 SOLUTION HAVE BEEN MODELED. 5.RESIDUES 173-174 ARE IN A REGION REMARK 3 OF ELECTRON DENSITY THAT IS NOT WELL-DEFINED. REMARK 4 REMARK 4 4MJF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000081985. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 10.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97879 REMARK 200 MONOCHROMATOR : SINGLE CRYSTAL SI(111) BENT REMARK 200 OPTICS : FLAT MIRROR (VERTICAL FOCUSING); REMARK 200 SINGLE CRYSTAL SI(111) BENT REMARK 200 MONOCHROMATOR (HORIZONTAL REMARK 200 FOCUSING) REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20233 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.990 REMARK 200 RESOLUTION RANGE LOW (A) : 48.085 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.03700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.2100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.99 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.56200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.30 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.200M LITHIUM SULFATE, 2.00M AMMONIUM REMARK 280 SULFATE, 0.200M SODIUM THIOCYANATE, 0.1M CAPS PH 10.5, VAPOR REMARK 280 DIFFUSION, SITTING DROP, NANODROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 32.35950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.95650 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 32.35950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.95650 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -178.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 64.71900 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 CL CL A 313 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASP A 25 REMARK 465 PRO A 26 REMARK 465 PHE A 27 REMARK 465 GLU A 28 REMARK 465 THR A 29 REMARK 465 LEU A 30 REMARK 465 THR A 31 REMARK 465 GLU A 32 REMARK 465 GLU A 33 REMARK 465 ILE A 34 REMARK 465 ASP A 35 REMARK 465 SER A 36 REMARK 465 LEU A 37 REMARK 465 THR A 38 REMARK 465 ALA A 39 REMARK 465 PRO A 40 REMARK 465 PRO A 41 REMARK 465 ASP A 42 REMARK 465 THR A 43 REMARK 465 THR A 44 REMARK 465 GLU A 45 REMARK 465 ALA A 46 REMARK 465 MSE A 47 REMARK 465 ALA A 48 REMARK 465 ALA A 49 REMARK 465 VAL A 50 REMARK 465 GLU A 51 REMARK 465 GLU A 52 REMARK 465 GLU A 53 REMARK 465 PRO A 54 REMARK 465 MSE A 55 REMARK 465 VAL A 56 REMARK 465 PRO A 57 REMARK 465 ALA A 58 REMARK 465 THR A 59 REMARK 465 GLU A 127 REMARK 465 LYS A 128 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 120 CG CD CE NZ REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 ASP A 173 CG OD1 OD2 REMARK 470 THR A 174 OG1 CG2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 107 -115.80 52.55 REMARK 500 THR A 130 -14.35 62.82 REMARK 500 ASP A 173 -158.06 -93.27 REMARK 500 GLU A 209 -120.14 -116.22 REMARK 500 PHE A 212 11.41 58.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXS A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CXS A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 309 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 310 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 311 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 312 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 313 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-385698 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (25-286) WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4MJF A 25 286 UNP A6L2I4 A6L2I4_BACV8 25 286 SEQADV 4MJF GLY A 0 UNP A6L2I4 EXPRESSION TAG SEQRES 1 A 263 GLY ASP PRO PHE GLU THR LEU THR GLU GLU ILE ASP SER SEQRES 2 A 263 LEU THR ALA PRO PRO ASP THR THR GLU ALA MSE ALA ALA SEQRES 3 A 263 VAL GLU GLU GLU PRO MSE VAL PRO ALA THR ALA ASP GLU SEQRES 4 A 263 SER PHE ALA ASP PHE PHE TYR ASN PHE ALA SER ASP GLU SEQRES 5 A 263 LYS LEU GLN LEU SER ARG ILE VAL PHE PRO LEU PRO TYR SEQRES 6 A 263 TYR THR MSE GLU LYS LYS GLU HIS ILE GLU LYS ASP GLN SEQRES 7 A 263 TRP LYS HIS ASP PRO LEU PHE SER ARG GLN ASP ALA TYR SEQRES 8 A 263 THR VAL LEU PHE ASP LYS ALA GLU ASP MSE GLU MSE GLU SEQRES 9 A 263 LYS ASP THR GLY LEU THR SER VAL LYS ILE GLU TRP ILE SEQRES 10 A 263 TYR LEU LYS LYS GLY LYS ILE LYS ARG TYR TYR PHE GLU SEQRES 11 A 263 ARG LEU LYS GLY LEU TRP LYS LEU GLU ALA ILE ASP PHE SEQRES 12 A 263 ALA ASP MSE PRO ARG GLU ASP THR GLY LYS GLU ASP PHE SEQRES 13 A 263 PHE GLU PHE TYR GLU ARG PHE ALA ASN ASP SER VAL PHE SEQRES 14 A 263 GLN LEU SER ARG LEU HIS GLU PRO LEU LYS PHE VAL THR SEQRES 15 A 263 ALA ASP PRO GLU ASP GLU PHE GLN ILE LEU GLU THR THR SEQRES 16 A 263 LEU GLU ALA GLY GLN TRP PHE ALA PHE GLN PRO VAL LEU SEQRES 17 A 263 PRO ARG GLU ASN LEU THR ASN VAL ASN TYR GLY GLN ASN SEQRES 18 A 263 GLU ASN VAL HIS SER ASN THR LYS VAL ILE GLU MSE LYS SEQRES 19 A 263 GLY PHE GLY ASN GLY PHE ASN ASN THR LEU TYR PHE GLU SEQRES 20 A 263 ARG ARG HIS GLY LEU TRP LYS LEU MSE GLN PHE GLU ASP SEQRES 21 A 263 LEU SER ASP MODRES 4MJF MSE A 91 MET SELENOMETHIONINE MODRES 4MJF MSE A 124 MET SELENOMETHIONINE MODRES 4MJF MSE A 126 MET SELENOMETHIONINE MODRES 4MJF MSE A 169 MET SELENOMETHIONINE MODRES 4MJF MSE A 256 MET SELENOMETHIONINE MODRES 4MJF MSE A 279 MET SELENOMETHIONINE HET MSE A 91 8 HET MSE A 124 8 HET MSE A 126 8 HET MSE A 169 8 HET MSE A 256 13 HET MSE A 279 8 HET CXS A 300 14 HET CXS A 301 14 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET EDO A 306 4 HET EDO A 307 4 HET EDO A 308 4 HET EDO A 309 4 HET EDO A 310 4 HET CL A 311 1 HET CL A 312 1 HET CL A 313 1 HET CL A 314 1 HETNAM MSE SELENOMETHIONINE HETNAM CXS 3-CYCLOHEXYL-1-PROPYLSULFONIC ACID HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM CL CHLORIDE ION HETSYN EDO ETHYLENE GLYCOL FORMUL 1 MSE 6(C5 H11 N O2 SE) FORMUL 2 CXS 2(C9 H19 N O3 S) FORMUL 4 SO4 4(O4 S 2-) FORMUL 8 EDO 5(C2 H6 O2) FORMUL 13 CL 4(CL 1-) FORMUL 17 HOH *123(H2 O) HELIX 1 1 SER A 63 ASP A 74 1 12 HELIX 2 2 ASP A 74 ARG A 81 1 8 HELIX 3 3 GLU A 98 TRP A 102 5 5 HELIX 4 4 LYS A 120 GLU A 125 5 6 HELIX 5 5 ASP A 178 ASP A 189 1 12 HELIX 6 6 ASP A 189 ARG A 196 1 8 HELIX 7 7 GLU A 220 GLN A 228 1 9 SHEET 1 A 6 LYS A 93 ILE A 97 0 SHEET 2 A 6 LEU A 86 THR A 90 -1 N TYR A 88 O GLU A 95 SHEET 3 A 6 LEU A 158 ASP A 168 1 O ILE A 164 N TYR A 89 SHEET 4 A 6 LYS A 146 LEU A 155 -1 N LEU A 155 O LEU A 158 SHEET 5 A 6 SER A 134 TYR A 141 -1 N TYR A 141 O LYS A 146 SHEET 6 A 6 ASN A 235 ASN A 240 -1 O LEU A 236 N ILE A 140 SHEET 1 B 6 ALA A 113 PHE A 118 0 SHEET 2 B 6 THR A 251 GLY A 258 -1 O LYS A 257 N TYR A 114 SHEET 3 B 6 ASN A 264 ARG A 272 -1 O ASN A 265 N MSE A 256 SHEET 4 B 6 LEU A 275 ASP A 283 -1 O GLU A 282 N THR A 266 SHEET 5 B 6 LEU A 197 ALA A 206 1 N VAL A 204 O ASP A 283 SHEET 6 B 6 ILE A 214 LEU A 219 -1 O LEU A 215 N THR A 205 LINK C THR A 90 N MSE A 91 1555 1555 1.34 LINK C MSE A 91 N GLU A 92 1555 1555 1.35 LINK C ASP A 123 N MSE A 124 1555 1555 1.36 LINK C MSE A 124 N GLU A 125 1555 1555 1.35 LINK C GLU A 125 N MSE A 126 1555 1555 1.35 LINK C ASP A 168 N MSE A 169 1555 1555 1.34 LINK C MSE A 169 N PRO A 170 1555 1555 1.36 LINK C GLU A 255 N MSE A 256 1555 1555 1.34 LINK C MSE A 256 N LYS A 257 1555 1555 1.35 LINK C LEU A 278 N MSE A 279 1555 1555 1.34 LINK C MSE A 279 N GLN A 280 1555 1555 1.34 CISPEP 1 PHE A 84 PRO A 85 0 0.17 CISPEP 2 GLU A 199 PRO A 200 0 3.71 SITE 1 AC1 7 PHE A 108 TYR A 114 PHE A 259 GLY A 260 SITE 2 AC1 7 EDO A 310 HOH A 444 HOH A 497 SITE 1 AC2 5 TYR A 89 ARG A 149 GLU A 153 ASP A 165 SITE 2 AC2 5 ALA A 167 SITE 1 AC3 5 ARG A 272 HIS A 273 HOH A 401 HOH A 435 SITE 2 AC3 5 HOH A 492 SITE 1 AC4 6 LEU A 158 LYS A 176 ASN A 250 ARG A 271 SITE 2 AC4 6 HOH A 440 HOH A 481 SITE 1 AC5 7 LYS A 76 GLU A 177 GLU A 181 PHE A 182 SITE 2 AC5 7 ARG A 185 PHE A 192 HOH A 453 SITE 1 AC6 3 ARG A 233 GLU A 234 ASN A 235 SITE 1 AC7 8 LEU A 117 PHE A 118 ASP A 119 ASN A 238 SITE 2 AC7 8 GLN A 243 ASN A 244 GLU A 245 LYS A 252 SITE 1 AC8 5 PHE A 68 TYR A 69 SER A 109 PHE A 259 SITE 2 AC8 5 HOH A 444 SITE 1 AC9 3 GLU A 199 HOH A 435 HOH A 449 SITE 1 BC1 5 LYS A 136 ASN A 240 GLN A 243 GLU A 245 SITE 2 BC1 5 HOH A 427 SITE 1 BC2 1 CXS A 300 SITE 1 BC3 1 HIS A 198 SITE 1 BC4 1 HIS A 273 SITE 1 BC5 1 GLY A 222 CRYST1 64.719 71.913 65.504 90.00 92.31 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015451 0.000000 0.000623 0.00000 SCALE2 0.000000 0.013906 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015279 0.00000