data_4ML2 # _entry.id 4ML2 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4ML2 pdb_00004ml2 10.2210/pdb4ml2/pdb RCSB RCSB082044 ? ? WWPDB D_1000082044 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4ML0 . unspecified PDB 4MMJ . unspecified PDB 4MMG 'same protein but from different E.coli strain' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4ML2 _pdbx_database_status.recvd_initial_deposition_date 2013-09-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Liang, Y.J.' 1 'Gao, Z.Q.' 2 'Liu, Q.S.' 3 'Dong, Y.H.' 4 # _citation.id primary _citation.title 'Structural and Functional Characterization of Escherichia coli Toxin-Antitoxin Complex DinJ-YafQ' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 289 _citation.page_first 21191 _citation.page_last 21202 _citation.year 2014 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24923448 _citation.pdbx_database_id_DOI 10.1074/jbc.M114.559773 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Liang, Y.' 1 ? primary 'Gao, Z.' 2 ? primary 'Wang, F.' 3 ? primary 'Zhang, Y.' 4 ? primary 'Dong, Y.' 5 ? primary 'Liu, Q.' 6 ? # _cell.entry_id 4ML2 _cell.length_a 41.299 _cell.length_b 89.832 _cell.length_c 75.015 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4ML2 _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'mRNA interferase YafQ' 11110.871 1 3.1.-.- ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 5 ? ? ? ? 3 water nat water 18.015 217 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Endoribonuclease YafQ, Toxin YafQ' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;STGMIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDK LLRFERTGTHAALFG ; _entity_poly.pdbx_seq_one_letter_code_can ;STGMIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDK LLRFERTGTHAALFG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 THR n 1 3 GLY n 1 4 MET n 1 5 ILE n 1 6 GLN n 1 7 ARG n 1 8 ASP n 1 9 ILE n 1 10 GLU n 1 11 TYR n 1 12 SER n 1 13 GLY n 1 14 GLN n 1 15 TYR n 1 16 SER n 1 17 LYS n 1 18 ASP n 1 19 VAL n 1 20 LYS n 1 21 LEU n 1 22 ALA n 1 23 GLN n 1 24 LYS n 1 25 ARG n 1 26 HIS n 1 27 LYS n 1 28 ASP n 1 29 MET n 1 30 ASN n 1 31 LYS n 1 32 LEU n 1 33 LYS n 1 34 TYR n 1 35 LEU n 1 36 MET n 1 37 THR n 1 38 LEU n 1 39 LEU n 1 40 ILE n 1 41 ASN n 1 42 ASN n 1 43 THR n 1 44 LEU n 1 45 PRO n 1 46 LEU n 1 47 PRO n 1 48 ALA n 1 49 VAL n 1 50 TYR n 1 51 LYS n 1 52 ASP n 1 53 HIS n 1 54 PRO n 1 55 LEU n 1 56 GLN n 1 57 GLY n 1 58 SER n 1 59 TRP n 1 60 LYS n 1 61 GLY n 1 62 TYR n 1 63 ARG n 1 64 ASP n 1 65 ALA n 1 66 HIS n 1 67 VAL n 1 68 GLU n 1 69 PRO n 1 70 ASP n 1 71 TRP n 1 72 ILE n 1 73 LEU n 1 74 ILE n 1 75 TYR n 1 76 LYS n 1 77 LEU n 1 78 THR n 1 79 ASP n 1 80 LYS n 1 81 LEU n 1 82 LEU n 1 83 ARG n 1 84 PHE n 1 85 GLU n 1 86 ARG n 1 87 THR n 1 88 GLY n 1 89 THR n 1 90 HIS n 1 91 ALA n 1 92 ALA n 1 93 LEU n 1 94 PHE n 1 95 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'yafQ, b0225, JW0215' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain K12 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 83333 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code YAFQ_ECOLI _struct_ref.pdbx_db_accession Q47149 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MIQRDIEYSGQYSKDVKLAQKRHKDMNKLKYLMTLLINNTLPLPAVYKDHPLQGSWKGYRDAHVEPDWILIYKLTDKLLR FERTGTHAALFG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4ML2 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 95 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q47149 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 92 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 92 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ML2 SER A 1 ? UNP Q47149 ? ? 'expression tag' -2 1 1 4ML2 THR A 2 ? UNP Q47149 ? ? 'expression tag' -1 2 1 4ML2 GLY A 3 ? UNP Q47149 ? ? 'expression tag' 0 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4ML2 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.13 _exptl_crystal.density_percent_sol 60.71 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details '0.2M (NH4)2SO4, 30% PEG8000, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MAR CCD 165 mm' _diffrn_detector.pdbx_collection_date 2012-07-19 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BSRF BEAMLINE 1W2B' _diffrn_source.pdbx_synchrotron_site BSRF _diffrn_source.pdbx_synchrotron_beamline 1W2B _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4ML2 _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.50 _reflns.number_obs 22754 _reflns.number_all 22814 _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 72.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.0 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.53 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.167 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 16.3 _reflns_shell.pdbx_redundancy 6.9 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1104 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4ML2 _refine.ls_number_reflns_obs 22746 _refine.ls_number_reflns_all 22814 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.35 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.790 _refine.ls_d_res_high 1.500 _refine.ls_percent_reflns_obs 99.99 _refine.ls_R_factor_obs 0.1757 _refine.ls_R_factor_all 0.1764 _refine.ls_R_factor_R_work 0.1757 _refine.ls_R_factor_R_free 0.1892 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.11 _refine.ls_number_reflns_R_free 1163 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -1.2061 _refine.aniso_B[2][2] -2.0502 _refine.aniso_B[3][3] -0.6431 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 45.103 _refine.pdbx_solvent_vdw_probe_radii 1.10 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.86 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 4MMG _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details random _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.17 _refine.pdbx_overall_phase_error 15.21 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 749 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 25 _refine_hist.number_atoms_solvent 217 _refine_hist.number_atoms_total 991 _refine_hist.d_res_high 1.500 _refine_hist.d_res_low 28.790 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 810 ? 'X-RAY DIFFRACTION' f_angle_d 1.084 ? ? 1098 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 12.545 ? ? 304 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.076 ? ? 112 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 135 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs 'X-RAY DIFFRACTION' 8 1.5000 1.5683 2644 0.2180 100.00 0.2581 . . 131 . . . . 'X-RAY DIFFRACTION' 8 1.5683 1.6510 2675 0.1816 100.00 0.2196 . . 156 . . . . 'X-RAY DIFFRACTION' 8 1.6510 1.7544 2629 0.1639 100.00 0.1913 . . 157 . . . . 'X-RAY DIFFRACTION' 8 1.7544 1.8898 2673 0.1638 100.00 0.2003 . . 142 . . . . 'X-RAY DIFFRACTION' 8 1.8898 2.0799 2708 0.1685 100.00 0.1834 . . 132 . . . . 'X-RAY DIFFRACTION' 8 2.0799 2.3808 2696 0.1700 100.00 0.1648 . . 148 . . . . 'X-RAY DIFFRACTION' 8 2.3808 2.9990 2714 0.1753 100.00 0.1989 . . 153 . . . . 'X-RAY DIFFRACTION' 8 2.9990 28.7949 2844 0.1796 100.00 0.1789 . . 144 . . . . # _struct.entry_id 4ML2 _struct.title 'Crystal structure of wild-type YafQ' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4ML2 _struct_keywords.pdbx_keywords TOXIN _struct_keywords.text 'toxin, antitoxin' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 2 ? G N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 12 ? ARG A 25 ? SER A 9 ARG A 22 1 ? 14 HELX_P HELX_P2 2 ASP A 28 ? ASN A 41 ? ASP A 25 ASN A 38 1 ? 14 HELX_P HELX_P3 3 PRO A 47 ? LYS A 51 ? PRO A 44 LYS A 48 5 ? 5 HELX_P HELX_P4 4 GLN A 56 ? LYS A 60 ? GLN A 53 LYS A 57 5 ? 5 HELX_P HELX_P5 5 THR A 89 ? GLY A 95 ? THR A 86 GLY A 92 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id LEU _struct_mon_prot_cis.label_seq_id 44 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id LEU _struct_mon_prot_cis.auth_seq_id 41 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 45 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 42 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle -2.51 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 8 ? TYR A 11 ? ASP A 5 TYR A 8 A 2 LEU A 81 ? GLY A 88 ? LEU A 78 GLY A 85 A 3 TRP A 71 ? LEU A 77 ? TRP A 68 LEU A 74 A 4 ARG A 63 ? GLU A 68 ? ARG A 60 GLU A 65 A 5 HIS A 53 ? PRO A 54 ? HIS A 50 PRO A 51 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 10 ? N GLU A 7 O LEU A 82 ? O LEU A 79 A 2 3 O GLY A 88 ? O GLY A 85 N ILE A 72 ? N ILE A 69 A 3 4 O TYR A 75 ? O TYR A 72 N ARG A 63 ? N ARG A 60 A 4 5 O ASP A 64 ? O ASP A 61 N HIS A 53 ? N HIS A 50 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 101 ? 8 'BINDING SITE FOR RESIDUE SO4 A 101' AC2 Software A SO4 102 ? 9 'BINDING SITE FOR RESIDUE SO4 A 102' AC3 Software A SO4 103 ? 10 'BINDING SITE FOR RESIDUE SO4 A 103' AC4 Software A SO4 104 ? 10 'BINDING SITE FOR RESIDUE SO4 A 104' AC5 Software A SO4 105 ? 6 'BINDING SITE FOR RESIDUE SO4 A 105' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 HIS A 26 ? HIS A 23 . ? 8_555 ? 2 AC1 8 HIS A 53 ? HIS A 50 . ? 1_555 ? 3 AC1 8 ASP A 64 ? ASP A 61 . ? 1_555 ? 4 AC1 8 HIS A 66 ? HIS A 63 . ? 1_555 ? 5 AC1 8 HIS A 90 ? HIS A 87 . ? 1_555 ? 6 AC1 8 HOH G . ? HOH A 320 . ? 8_555 ? 7 AC1 8 HOH G . ? HOH A 337 . ? 1_555 ? 8 AC1 8 HOH G . ? HOH A 393 . ? 1_555 ? 9 AC2 9 LYS A 51 ? LYS A 48 . ? 1_555 ? 10 AC2 9 HIS A 66 ? HIS A 63 . ? 1_555 ? 11 AC2 9 PRO A 69 ? PRO A 66 . ? 1_555 ? 12 AC2 9 HOH G . ? HOH A 213 . ? 1_555 ? 13 AC2 9 HOH G . ? HOH A 215 . ? 1_555 ? 14 AC2 9 HOH G . ? HOH A 224 . ? 1_555 ? 15 AC2 9 HOH G . ? HOH A 298 . ? 1_555 ? 16 AC2 9 HOH G . ? HOH A 346 . ? 1_555 ? 17 AC2 9 HOH G . ? HOH A 353 . ? 1_555 ? 18 AC3 10 ARG A 25 ? ARG A 22 . ? 1_555 ? 19 AC3 10 GLY A 57 ? GLY A 54 . ? 8_455 ? 20 AC3 10 THR A 89 ? THR A 86 . ? 1_555 ? 21 AC3 10 ALA A 92 ? ALA A 89 . ? 1_555 ? 22 AC3 10 HOH G . ? HOH A 203 . ? 1_555 ? 23 AC3 10 HOH G . ? HOH A 251 . ? 8_455 ? 24 AC3 10 HOH G . ? HOH A 263 . ? 1_555 ? 25 AC3 10 HOH G . ? HOH A 323 . ? 1_555 ? 26 AC3 10 HOH G . ? HOH A 373 . ? 1_555 ? 27 AC3 10 HOH G . ? HOH A 386 . ? 1_555 ? 28 AC4 10 PRO A 47 ? PRO A 44 . ? 1_555 ? 29 AC4 10 ALA A 48 ? ALA A 45 . ? 1_555 ? 30 AC4 10 PRO A 54 ? PRO A 51 . ? 3_654 ? 31 AC4 10 ARG A 63 ? ARG A 60 . ? 3_654 ? 32 AC4 10 HOH G . ? HOH A 214 . ? 1_555 ? 33 AC4 10 HOH G . ? HOH A 231 . ? 1_555 ? 34 AC4 10 HOH G . ? HOH A 294 . ? 1_555 ? 35 AC4 10 HOH G . ? HOH A 315 . ? 3_654 ? 36 AC4 10 HOH G . ? HOH A 351 . ? 1_555 ? 37 AC4 10 HOH G . ? HOH A 369 . ? 3_654 ? 38 AC5 6 LYS A 76 ? LYS A 73 . ? 1_555 ? 39 AC5 6 ARG A 83 ? ARG A 80 . ? 1_555 ? 40 AC5 6 HOH G . ? HOH A 279 . ? 1_555 ? 41 AC5 6 HOH G . ? HOH A 307 . ? 1_555 ? 42 AC5 6 HOH G . ? HOH A 379 . ? 1_555 ? 43 AC5 6 HOH G . ? HOH A 399 . ? 1_555 ? # _database_PDB_matrix.entry_id 4ML2 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4ML2 _atom_sites.fract_transf_matrix[1][1] 0.024214 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011132 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013331 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 ? ? ? A . n A 1 2 THR 2 -1 ? ? ? A . n A 1 3 GLY 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 ILE 5 2 ? ? ? A . n A 1 6 GLN 6 3 3 GLN GLN A . n A 1 7 ARG 7 4 4 ARG ARG A . n A 1 8 ASP 8 5 5 ASP ASP A . n A 1 9 ILE 9 6 6 ILE ILE A . n A 1 10 GLU 10 7 7 GLU GLU A . n A 1 11 TYR 11 8 8 TYR TYR A . n A 1 12 SER 12 9 9 SER SER A . n A 1 13 GLY 13 10 10 GLY GLY A . n A 1 14 GLN 14 11 11 GLN GLN A . n A 1 15 TYR 15 12 12 TYR TYR A . n A 1 16 SER 16 13 13 SER SER A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 ASP 18 15 15 ASP ASP A . n A 1 19 VAL 19 16 16 VAL VAL A . n A 1 20 LYS 20 17 17 LYS LYS A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 ALA 22 19 19 ALA ALA A . n A 1 23 GLN 23 20 20 GLN GLN A . n A 1 24 LYS 24 21 21 LYS LYS A . n A 1 25 ARG 25 22 22 ARG ARG A . n A 1 26 HIS 26 23 23 HIS HIS A . n A 1 27 LYS 27 24 24 LYS LYS A . n A 1 28 ASP 28 25 25 ASP ASP A . n A 1 29 MET 29 26 26 MET MET A . n A 1 30 ASN 30 27 27 ASN ASN A . n A 1 31 LYS 31 28 28 LYS LYS A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 TYR 34 31 31 TYR TYR A . n A 1 35 LEU 35 32 32 LEU LEU A . n A 1 36 MET 36 33 33 MET MET A . n A 1 37 THR 37 34 34 THR THR A . n A 1 38 LEU 38 35 35 LEU LEU A . n A 1 39 LEU 39 36 36 LEU LEU A . n A 1 40 ILE 40 37 37 ILE ILE A . n A 1 41 ASN 41 38 38 ASN ASN A . n A 1 42 ASN 42 39 39 ASN ASN A . n A 1 43 THR 43 40 40 THR THR A . n A 1 44 LEU 44 41 41 LEU LEU A . n A 1 45 PRO 45 42 42 PRO PRO A . n A 1 46 LEU 46 43 43 LEU LEU A . n A 1 47 PRO 47 44 44 PRO PRO A . n A 1 48 ALA 48 45 45 ALA ALA A . n A 1 49 VAL 49 46 46 VAL VAL A . n A 1 50 TYR 50 47 47 TYR TYR A . n A 1 51 LYS 51 48 48 LYS LYS A . n A 1 52 ASP 52 49 49 ASP ASP A . n A 1 53 HIS 53 50 50 HIS HIS A . n A 1 54 PRO 54 51 51 PRO PRO A . n A 1 55 LEU 55 52 52 LEU LEU A . n A 1 56 GLN 56 53 53 GLN GLN A . n A 1 57 GLY 57 54 54 GLY GLY A . n A 1 58 SER 58 55 55 SER SER A . n A 1 59 TRP 59 56 56 TRP TRP A . n A 1 60 LYS 60 57 57 LYS LYS A . n A 1 61 GLY 61 58 58 GLY GLY A . n A 1 62 TYR 62 59 59 TYR TYR A . n A 1 63 ARG 63 60 60 ARG ARG A . n A 1 64 ASP 64 61 61 ASP ASP A . n A 1 65 ALA 65 62 62 ALA ALA A . n A 1 66 HIS 66 63 63 HIS HIS A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 GLU 68 65 65 GLU GLU A . n A 1 69 PRO 69 66 66 PRO PRO A . n A 1 70 ASP 70 67 67 ASP ASP A . n A 1 71 TRP 71 68 68 TRP TRP A . n A 1 72 ILE 72 69 69 ILE ILE A . n A 1 73 LEU 73 70 70 LEU LEU A . n A 1 74 ILE 74 71 71 ILE ILE A . n A 1 75 TYR 75 72 72 TYR TYR A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 LEU 77 74 74 LEU LEU A . n A 1 78 THR 78 75 75 THR THR A . n A 1 79 ASP 79 76 76 ASP ASP A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 LEU 81 78 78 LEU LEU A . n A 1 82 LEU 82 79 79 LEU LEU A . n A 1 83 ARG 83 80 80 ARG ARG A . n A 1 84 PHE 84 81 81 PHE PHE A . n A 1 85 GLU 85 82 82 GLU GLU A . n A 1 86 ARG 86 83 83 ARG ARG A . n A 1 87 THR 87 84 84 THR THR A . n A 1 88 GLY 88 85 85 GLY GLY A . n A 1 89 THR 89 86 86 THR THR A . n A 1 90 HIS 90 87 87 HIS HIS A . n A 1 91 ALA 91 88 88 ALA ALA A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 LEU 93 90 90 LEU LEU A . n A 1 94 PHE 94 91 91 PHE PHE A . n A 1 95 GLY 95 92 92 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 101 1 SO4 SO4 A . C 2 SO4 1 102 2 SO4 SO4 A . D 2 SO4 1 103 3 SO4 SO4 A . E 2 SO4 1 104 4 SO4 SO4 A . F 2 SO4 1 105 5 SO4 SO4 A . G 3 HOH 1 201 1 HOH HOH A . G 3 HOH 2 202 2 HOH HOH A . G 3 HOH 3 203 3 HOH HOH A . G 3 HOH 4 204 4 HOH HOH A . G 3 HOH 5 205 5 HOH HOH A . G 3 HOH 6 206 6 HOH HOH A . G 3 HOH 7 207 7 HOH HOH A . G 3 HOH 8 208 8 HOH HOH A . G 3 HOH 9 209 9 HOH HOH A . G 3 HOH 10 210 10 HOH HOH A . G 3 HOH 11 211 11 HOH HOH A . G 3 HOH 12 212 12 HOH HOH A . G 3 HOH 13 213 13 HOH HOH A . G 3 HOH 14 214 14 HOH HOH A . G 3 HOH 15 215 15 HOH HOH A . G 3 HOH 16 216 16 HOH HOH A . G 3 HOH 17 217 17 HOH HOH A . G 3 HOH 18 218 18 HOH HOH A . G 3 HOH 19 219 19 HOH HOH A . G 3 HOH 20 220 20 HOH HOH A . G 3 HOH 21 221 21 HOH HOH A . G 3 HOH 22 222 22 HOH HOH A . G 3 HOH 23 223 23 HOH HOH A . G 3 HOH 24 224 24 HOH HOH A . G 3 HOH 25 225 25 HOH HOH A . G 3 HOH 26 226 26 HOH HOH A . G 3 HOH 27 227 27 HOH HOH A . G 3 HOH 28 228 28 HOH HOH A . G 3 HOH 29 229 29 HOH HOH A . G 3 HOH 30 230 30 HOH HOH A . G 3 HOH 31 231 31 HOH HOH A . G 3 HOH 32 232 32 HOH HOH A . G 3 HOH 33 233 33 HOH HOH A . G 3 HOH 34 234 34 HOH HOH A . G 3 HOH 35 235 35 HOH HOH A . G 3 HOH 36 236 36 HOH HOH A . G 3 HOH 37 237 37 HOH HOH A . G 3 HOH 38 238 38 HOH HOH A . G 3 HOH 39 239 39 HOH HOH A . G 3 HOH 40 240 40 HOH HOH A . G 3 HOH 41 241 41 HOH HOH A . G 3 HOH 42 242 42 HOH HOH A . G 3 HOH 43 243 43 HOH HOH A . G 3 HOH 44 244 44 HOH HOH A . G 3 HOH 45 245 45 HOH HOH A . G 3 HOH 46 246 46 HOH HOH A . G 3 HOH 47 247 47 HOH HOH A . G 3 HOH 48 248 48 HOH HOH A . G 3 HOH 49 249 49 HOH HOH A . G 3 HOH 50 250 50 HOH HOH A . G 3 HOH 51 251 51 HOH HOH A . G 3 HOH 52 252 52 HOH HOH A . G 3 HOH 53 253 53 HOH HOH A . G 3 HOH 54 254 54 HOH HOH A . G 3 HOH 55 255 55 HOH HOH A . G 3 HOH 56 256 56 HOH HOH A . G 3 HOH 57 257 57 HOH HOH A . G 3 HOH 58 258 58 HOH HOH A . G 3 HOH 59 259 59 HOH HOH A . G 3 HOH 60 260 60 HOH HOH A . G 3 HOH 61 261 61 HOH HOH A . G 3 HOH 62 262 62 HOH HOH A . G 3 HOH 63 263 63 HOH HOH A . G 3 HOH 64 264 64 HOH HOH A . G 3 HOH 65 265 65 HOH HOH A . G 3 HOH 66 266 66 HOH HOH A . G 3 HOH 67 267 67 HOH HOH A . G 3 HOH 68 268 68 HOH HOH A . G 3 HOH 69 269 69 HOH HOH A . G 3 HOH 70 270 70 HOH HOH A . G 3 HOH 71 271 71 HOH HOH A . G 3 HOH 72 272 72 HOH HOH A . G 3 HOH 73 273 73 HOH HOH A . G 3 HOH 74 274 74 HOH HOH A . G 3 HOH 75 275 75 HOH HOH A . G 3 HOH 76 276 76 HOH HOH A . G 3 HOH 77 277 77 HOH HOH A . G 3 HOH 78 278 78 HOH HOH A . G 3 HOH 79 279 79 HOH HOH A . G 3 HOH 80 280 80 HOH HOH A . G 3 HOH 81 281 81 HOH HOH A . G 3 HOH 82 282 82 HOH HOH A . G 3 HOH 83 283 83 HOH HOH A . G 3 HOH 84 284 84 HOH HOH A . G 3 HOH 85 285 85 HOH HOH A . G 3 HOH 86 286 86 HOH HOH A . G 3 HOH 87 287 87 HOH HOH A . G 3 HOH 88 288 88 HOH HOH A . G 3 HOH 89 289 89 HOH HOH A . G 3 HOH 90 290 90 HOH HOH A . G 3 HOH 91 291 91 HOH HOH A . G 3 HOH 92 292 92 HOH HOH A . G 3 HOH 93 293 93 HOH HOH A . G 3 HOH 94 294 94 HOH HOH A . G 3 HOH 95 295 95 HOH HOH A . G 3 HOH 96 296 96 HOH HOH A . G 3 HOH 97 297 97 HOH HOH A . G 3 HOH 98 298 98 HOH HOH A . G 3 HOH 99 299 99 HOH HOH A . G 3 HOH 100 300 100 HOH HOH A . G 3 HOH 101 301 101 HOH HOH A . G 3 HOH 102 302 102 HOH HOH A . G 3 HOH 103 303 103 HOH HOH A . G 3 HOH 104 304 104 HOH HOH A . G 3 HOH 105 305 105 HOH HOH A . G 3 HOH 106 306 106 HOH HOH A . G 3 HOH 107 307 107 HOH HOH A . G 3 HOH 108 308 108 HOH HOH A . G 3 HOH 109 309 109 HOH HOH A . G 3 HOH 110 310 110 HOH HOH A . G 3 HOH 111 311 111 HOH HOH A . G 3 HOH 112 312 112 HOH HOH A . G 3 HOH 113 313 113 HOH HOH A . G 3 HOH 114 314 114 HOH HOH A . G 3 HOH 115 315 115 HOH HOH A . G 3 HOH 116 316 116 HOH HOH A . G 3 HOH 117 317 117 HOH HOH A . G 3 HOH 118 318 118 HOH HOH A . G 3 HOH 119 319 119 HOH HOH A . G 3 HOH 120 320 120 HOH HOH A . G 3 HOH 121 321 121 HOH HOH A . G 3 HOH 122 322 122 HOH HOH A . G 3 HOH 123 323 123 HOH HOH A . G 3 HOH 124 324 124 HOH HOH A . G 3 HOH 125 325 125 HOH HOH A . G 3 HOH 126 326 126 HOH HOH A . G 3 HOH 127 327 127 HOH HOH A . G 3 HOH 128 328 128 HOH HOH A . G 3 HOH 129 329 129 HOH HOH A . G 3 HOH 130 330 130 HOH HOH A . G 3 HOH 131 331 131 HOH HOH A . G 3 HOH 132 332 132 HOH HOH A . G 3 HOH 133 333 133 HOH HOH A . G 3 HOH 134 334 134 HOH HOH A . G 3 HOH 135 335 135 HOH HOH A . G 3 HOH 136 336 136 HOH HOH A . G 3 HOH 137 337 137 HOH HOH A . G 3 HOH 138 338 138 HOH HOH A . G 3 HOH 139 339 139 HOH HOH A . G 3 HOH 140 340 140 HOH HOH A . G 3 HOH 141 341 141 HOH HOH A . G 3 HOH 142 342 142 HOH HOH A . G 3 HOH 143 343 143 HOH HOH A . G 3 HOH 144 344 144 HOH HOH A . G 3 HOH 145 345 145 HOH HOH A . G 3 HOH 146 346 146 HOH HOH A . G 3 HOH 147 347 147 HOH HOH A . G 3 HOH 148 348 148 HOH HOH A . G 3 HOH 149 349 149 HOH HOH A . G 3 HOH 150 350 150 HOH HOH A . G 3 HOH 151 351 151 HOH HOH A . G 3 HOH 152 352 152 HOH HOH A . G 3 HOH 153 353 153 HOH HOH A . G 3 HOH 154 354 154 HOH HOH A . G 3 HOH 155 355 155 HOH HOH A . G 3 HOH 156 356 156 HOH HOH A . G 3 HOH 157 357 157 HOH HOH A . G 3 HOH 158 358 158 HOH HOH A . G 3 HOH 159 359 159 HOH HOH A . G 3 HOH 160 360 160 HOH HOH A . G 3 HOH 161 361 161 HOH HOH A . G 3 HOH 162 362 162 HOH HOH A . G 3 HOH 163 363 163 HOH HOH A . G 3 HOH 164 364 164 HOH HOH A . G 3 HOH 165 365 165 HOH HOH A . G 3 HOH 166 366 166 HOH HOH A . G 3 HOH 167 367 167 HOH HOH A . G 3 HOH 168 368 168 HOH HOH A . G 3 HOH 169 369 169 HOH HOH A . G 3 HOH 170 370 170 HOH HOH A . G 3 HOH 171 371 171 HOH HOH A . G 3 HOH 172 372 172 HOH HOH A . G 3 HOH 173 373 173 HOH HOH A . G 3 HOH 174 374 174 HOH HOH A . G 3 HOH 175 375 175 HOH HOH A . G 3 HOH 176 376 176 HOH HOH A . G 3 HOH 177 377 177 HOH HOH A . G 3 HOH 178 378 178 HOH HOH A . G 3 HOH 179 379 179 HOH HOH A . G 3 HOH 180 380 180 HOH HOH A . G 3 HOH 181 381 181 HOH HOH A . G 3 HOH 182 382 182 HOH HOH A . G 3 HOH 183 383 183 HOH HOH A . G 3 HOH 184 384 184 HOH HOH A . G 3 HOH 185 385 185 HOH HOH A . G 3 HOH 186 386 186 HOH HOH A . G 3 HOH 187 387 187 HOH HOH A . G 3 HOH 188 388 188 HOH HOH A . G 3 HOH 189 389 189 HOH HOH A . G 3 HOH 190 390 190 HOH HOH A . G 3 HOH 191 391 191 HOH HOH A . G 3 HOH 192 392 192 HOH HOH A . G 3 HOH 193 393 193 HOH HOH A . G 3 HOH 194 394 194 HOH HOH A . G 3 HOH 195 395 195 HOH HOH A . G 3 HOH 196 396 196 HOH HOH A . G 3 HOH 197 397 197 HOH HOH A . G 3 HOH 198 398 198 HOH HOH A . G 3 HOH 199 399 199 HOH HOH A . G 3 HOH 200 400 200 HOH HOH A . G 3 HOH 201 401 201 HOH HOH A . G 3 HOH 202 402 202 HOH HOH A . G 3 HOH 203 403 203 HOH HOH A . G 3 HOH 204 404 204 HOH HOH A . G 3 HOH 205 405 205 HOH HOH A . G 3 HOH 206 406 206 HOH HOH A . G 3 HOH 207 407 207 HOH HOH A . G 3 HOH 208 408 208 HOH HOH A . G 3 HOH 209 409 209 HOH HOH A . G 3 HOH 210 410 210 HOH HOH A . G 3 HOH 211 411 211 HOH HOH A . G 3 HOH 212 412 212 HOH HOH A . G 3 HOH 213 413 213 HOH HOH A . G 3 HOH 214 414 214 HOH HOH A . G 3 HOH 215 415 215 HOH HOH A . G 3 HOH 216 416 216 HOH HOH A . G 3 HOH 217 417 217 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-06-25 2 'Structure model' 1 1 2014-08-20 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' struct_ref_seq_dif 7 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MAR345 'data collection' . ? 1 PHASER phasing . ? 2 PHENIX refinement '(phenix.refine: 1.7.3_928)' ? 3 HKL-2000 'data reduction' . ? 4 SCALEPACK 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 385 ? ? O A HOH 400 ? ? 1.83 2 1 O A HOH 383 ? ? O A HOH 398 ? ? 1.94 3 1 O1 A SO4 103 ? ? O A HOH 386 ? ? 1.96 4 1 O A HOH 260 ? ? O A HOH 398 ? ? 2.01 5 1 O A HOH 388 ? ? O A HOH 408 ? ? 2.06 6 1 O A HOH 331 ? ? O A HOH 376 ? ? 2.06 7 1 O A HOH 377 ? ? O A HOH 409 ? ? 2.07 8 1 O A HOH 391 ? ? O A HOH 396 ? ? 2.10 9 1 O A HOH 371 ? ? O A HOH 395 ? ? 2.14 10 1 O A HOH 323 ? ? O A HOH 386 ? ? 2.14 11 1 OD1 A ASP 5 ? ? O A HOH 253 ? ? 2.17 12 1 O A HOH 338 ? ? O A HOH 362 ? ? 2.17 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id GLN _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 53 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -115.18 _pdbx_validate_torsion.psi -165.73 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER -2 ? A SER 1 2 1 Y 1 A THR -1 ? A THR 2 3 1 Y 1 A GLY 0 ? A GLY 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A ILE 2 ? A ILE 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 HIS N N N N 123 HIS CA C N S 124 HIS C C N N 125 HIS O O N N 126 HIS CB C N N 127 HIS CG C Y N 128 HIS ND1 N Y N 129 HIS CD2 C Y N 130 HIS CE1 C Y N 131 HIS NE2 N Y N 132 HIS OXT O N N 133 HIS H H N N 134 HIS H2 H N N 135 HIS HA H N N 136 HIS HB2 H N N 137 HIS HB3 H N N 138 HIS HD1 H N N 139 HIS HD2 H N N 140 HIS HE1 H N N 141 HIS HE2 H N N 142 HIS HXT H N N 143 HOH O O N N 144 HOH H1 H N N 145 HOH H2 H N N 146 ILE N N N N 147 ILE CA C N S 148 ILE C C N N 149 ILE O O N N 150 ILE CB C N S 151 ILE CG1 C N N 152 ILE CG2 C N N 153 ILE CD1 C N N 154 ILE OXT O N N 155 ILE H H N N 156 ILE H2 H N N 157 ILE HA H N N 158 ILE HB H N N 159 ILE HG12 H N N 160 ILE HG13 H N N 161 ILE HG21 H N N 162 ILE HG22 H N N 163 ILE HG23 H N N 164 ILE HD11 H N N 165 ILE HD12 H N N 166 ILE HD13 H N N 167 ILE HXT H N N 168 LEU N N N N 169 LEU CA C N S 170 LEU C C N N 171 LEU O O N N 172 LEU CB C N N 173 LEU CG C N N 174 LEU CD1 C N N 175 LEU CD2 C N N 176 LEU OXT O N N 177 LEU H H N N 178 LEU H2 H N N 179 LEU HA H N N 180 LEU HB2 H N N 181 LEU HB3 H N N 182 LEU HG H N N 183 LEU HD11 H N N 184 LEU HD12 H N N 185 LEU HD13 H N N 186 LEU HD21 H N N 187 LEU HD22 H N N 188 LEU HD23 H N N 189 LEU HXT H N N 190 LYS N N N N 191 LYS CA C N S 192 LYS C C N N 193 LYS O O N N 194 LYS CB C N N 195 LYS CG C N N 196 LYS CD C N N 197 LYS CE C N N 198 LYS NZ N N N 199 LYS OXT O N N 200 LYS H H N N 201 LYS H2 H N N 202 LYS HA H N N 203 LYS HB2 H N N 204 LYS HB3 H N N 205 LYS HG2 H N N 206 LYS HG3 H N N 207 LYS HD2 H N N 208 LYS HD3 H N N 209 LYS HE2 H N N 210 LYS HE3 H N N 211 LYS HZ1 H N N 212 LYS HZ2 H N N 213 LYS HZ3 H N N 214 LYS HXT H N N 215 MET N N N N 216 MET CA C N S 217 MET C C N N 218 MET O O N N 219 MET CB C N N 220 MET CG C N N 221 MET SD S N N 222 MET CE C N N 223 MET OXT O N N 224 MET H H N N 225 MET H2 H N N 226 MET HA H N N 227 MET HB2 H N N 228 MET HB3 H N N 229 MET HG2 H N N 230 MET HG3 H N N 231 MET HE1 H N N 232 MET HE2 H N N 233 MET HE3 H N N 234 MET HXT H N N 235 PHE N N N N 236 PHE CA C N S 237 PHE C C N N 238 PHE O O N N 239 PHE CB C N N 240 PHE CG C Y N 241 PHE CD1 C Y N 242 PHE CD2 C Y N 243 PHE CE1 C Y N 244 PHE CE2 C Y N 245 PHE CZ C Y N 246 PHE OXT O N N 247 PHE H H N N 248 PHE H2 H N N 249 PHE HA H N N 250 PHE HB2 H N N 251 PHE HB3 H N N 252 PHE HD1 H N N 253 PHE HD2 H N N 254 PHE HE1 H N N 255 PHE HE2 H N N 256 PHE HZ H N N 257 PHE HXT H N N 258 PRO N N N N 259 PRO CA C N S 260 PRO C C N N 261 PRO O O N N 262 PRO CB C N N 263 PRO CG C N N 264 PRO CD C N N 265 PRO OXT O N N 266 PRO H H N N 267 PRO HA H N N 268 PRO HB2 H N N 269 PRO HB3 H N N 270 PRO HG2 H N N 271 PRO HG3 H N N 272 PRO HD2 H N N 273 PRO HD3 H N N 274 PRO HXT H N N 275 SER N N N N 276 SER CA C N S 277 SER C C N N 278 SER O O N N 279 SER CB C N N 280 SER OG O N N 281 SER OXT O N N 282 SER H H N N 283 SER H2 H N N 284 SER HA H N N 285 SER HB2 H N N 286 SER HB3 H N N 287 SER HG H N N 288 SER HXT H N N 289 SO4 S S N N 290 SO4 O1 O N N 291 SO4 O2 O N N 292 SO4 O3 O N N 293 SO4 O4 O N N 294 THR N N N N 295 THR CA C N S 296 THR C C N N 297 THR O O N N 298 THR CB C N R 299 THR OG1 O N N 300 THR CG2 C N N 301 THR OXT O N N 302 THR H H N N 303 THR H2 H N N 304 THR HA H N N 305 THR HB H N N 306 THR HG1 H N N 307 THR HG21 H N N 308 THR HG22 H N N 309 THR HG23 H N N 310 THR HXT H N N 311 TRP N N N N 312 TRP CA C N S 313 TRP C C N N 314 TRP O O N N 315 TRP CB C N N 316 TRP CG C Y N 317 TRP CD1 C Y N 318 TRP CD2 C Y N 319 TRP NE1 N Y N 320 TRP CE2 C Y N 321 TRP CE3 C Y N 322 TRP CZ2 C Y N 323 TRP CZ3 C Y N 324 TRP CH2 C Y N 325 TRP OXT O N N 326 TRP H H N N 327 TRP H2 H N N 328 TRP HA H N N 329 TRP HB2 H N N 330 TRP HB3 H N N 331 TRP HD1 H N N 332 TRP HE1 H N N 333 TRP HE3 H N N 334 TRP HZ2 H N N 335 TRP HZ3 H N N 336 TRP HH2 H N N 337 TRP HXT H N N 338 TYR N N N N 339 TYR CA C N S 340 TYR C C N N 341 TYR O O N N 342 TYR CB C N N 343 TYR CG C Y N 344 TYR CD1 C Y N 345 TYR CD2 C Y N 346 TYR CE1 C Y N 347 TYR CE2 C Y N 348 TYR CZ C Y N 349 TYR OH O N N 350 TYR OXT O N N 351 TYR H H N N 352 TYR H2 H N N 353 TYR HA H N N 354 TYR HB2 H N N 355 TYR HB3 H N N 356 TYR HD1 H N N 357 TYR HD2 H N N 358 TYR HE1 H N N 359 TYR HE2 H N N 360 TYR HH H N N 361 TYR HXT H N N 362 VAL N N N N 363 VAL CA C N S 364 VAL C C N N 365 VAL O O N N 366 VAL CB C N N 367 VAL CG1 C N N 368 VAL CG2 C N N 369 VAL OXT O N N 370 VAL H H N N 371 VAL H2 H N N 372 VAL HA H N N 373 VAL HB H N N 374 VAL HG11 H N N 375 VAL HG12 H N N 376 VAL HG13 H N N 377 VAL HG21 H N N 378 VAL HG22 H N N 379 VAL HG23 H N N 380 VAL HXT H N N 381 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 HIS N CA sing N N 116 HIS N H sing N N 117 HIS N H2 sing N N 118 HIS CA C sing N N 119 HIS CA CB sing N N 120 HIS CA HA sing N N 121 HIS C O doub N N 122 HIS C OXT sing N N 123 HIS CB CG sing N N 124 HIS CB HB2 sing N N 125 HIS CB HB3 sing N N 126 HIS CG ND1 sing Y N 127 HIS CG CD2 doub Y N 128 HIS ND1 CE1 doub Y N 129 HIS ND1 HD1 sing N N 130 HIS CD2 NE2 sing Y N 131 HIS CD2 HD2 sing N N 132 HIS CE1 NE2 sing Y N 133 HIS CE1 HE1 sing N N 134 HIS NE2 HE2 sing N N 135 HIS OXT HXT sing N N 136 HOH O H1 sing N N 137 HOH O H2 sing N N 138 ILE N CA sing N N 139 ILE N H sing N N 140 ILE N H2 sing N N 141 ILE CA C sing N N 142 ILE CA CB sing N N 143 ILE CA HA sing N N 144 ILE C O doub N N 145 ILE C OXT sing N N 146 ILE CB CG1 sing N N 147 ILE CB CG2 sing N N 148 ILE CB HB sing N N 149 ILE CG1 CD1 sing N N 150 ILE CG1 HG12 sing N N 151 ILE CG1 HG13 sing N N 152 ILE CG2 HG21 sing N N 153 ILE CG2 HG22 sing N N 154 ILE CG2 HG23 sing N N 155 ILE CD1 HD11 sing N N 156 ILE CD1 HD12 sing N N 157 ILE CD1 HD13 sing N N 158 ILE OXT HXT sing N N 159 LEU N CA sing N N 160 LEU N H sing N N 161 LEU N H2 sing N N 162 LEU CA C sing N N 163 LEU CA CB sing N N 164 LEU CA HA sing N N 165 LEU C O doub N N 166 LEU C OXT sing N N 167 LEU CB CG sing N N 168 LEU CB HB2 sing N N 169 LEU CB HB3 sing N N 170 LEU CG CD1 sing N N 171 LEU CG CD2 sing N N 172 LEU CG HG sing N N 173 LEU CD1 HD11 sing N N 174 LEU CD1 HD12 sing N N 175 LEU CD1 HD13 sing N N 176 LEU CD2 HD21 sing N N 177 LEU CD2 HD22 sing N N 178 LEU CD2 HD23 sing N N 179 LEU OXT HXT sing N N 180 LYS N CA sing N N 181 LYS N H sing N N 182 LYS N H2 sing N N 183 LYS CA C sing N N 184 LYS CA CB sing N N 185 LYS CA HA sing N N 186 LYS C O doub N N 187 LYS C OXT sing N N 188 LYS CB CG sing N N 189 LYS CB HB2 sing N N 190 LYS CB HB3 sing N N 191 LYS CG CD sing N N 192 LYS CG HG2 sing N N 193 LYS CG HG3 sing N N 194 LYS CD CE sing N N 195 LYS CD HD2 sing N N 196 LYS CD HD3 sing N N 197 LYS CE NZ sing N N 198 LYS CE HE2 sing N N 199 LYS CE HE3 sing N N 200 LYS NZ HZ1 sing N N 201 LYS NZ HZ2 sing N N 202 LYS NZ HZ3 sing N N 203 LYS OXT HXT sing N N 204 MET N CA sing N N 205 MET N H sing N N 206 MET N H2 sing N N 207 MET CA C sing N N 208 MET CA CB sing N N 209 MET CA HA sing N N 210 MET C O doub N N 211 MET C OXT sing N N 212 MET CB CG sing N N 213 MET CB HB2 sing N N 214 MET CB HB3 sing N N 215 MET CG SD sing N N 216 MET CG HG2 sing N N 217 MET CG HG3 sing N N 218 MET SD CE sing N N 219 MET CE HE1 sing N N 220 MET CE HE2 sing N N 221 MET CE HE3 sing N N 222 MET OXT HXT sing N N 223 PHE N CA sing N N 224 PHE N H sing N N 225 PHE N H2 sing N N 226 PHE CA C sing N N 227 PHE CA CB sing N N 228 PHE CA HA sing N N 229 PHE C O doub N N 230 PHE C OXT sing N N 231 PHE CB CG sing N N 232 PHE CB HB2 sing N N 233 PHE CB HB3 sing N N 234 PHE CG CD1 doub Y N 235 PHE CG CD2 sing Y N 236 PHE CD1 CE1 sing Y N 237 PHE CD1 HD1 sing N N 238 PHE CD2 CE2 doub Y N 239 PHE CD2 HD2 sing N N 240 PHE CE1 CZ doub Y N 241 PHE CE1 HE1 sing N N 242 PHE CE2 CZ sing Y N 243 PHE CE2 HE2 sing N N 244 PHE CZ HZ sing N N 245 PHE OXT HXT sing N N 246 PRO N CA sing N N 247 PRO N CD sing N N 248 PRO N H sing N N 249 PRO CA C sing N N 250 PRO CA CB sing N N 251 PRO CA HA sing N N 252 PRO C O doub N N 253 PRO C OXT sing N N 254 PRO CB CG sing N N 255 PRO CB HB2 sing N N 256 PRO CB HB3 sing N N 257 PRO CG CD sing N N 258 PRO CG HG2 sing N N 259 PRO CG HG3 sing N N 260 PRO CD HD2 sing N N 261 PRO CD HD3 sing N N 262 PRO OXT HXT sing N N 263 SER N CA sing N N 264 SER N H sing N N 265 SER N H2 sing N N 266 SER CA C sing N N 267 SER CA CB sing N N 268 SER CA HA sing N N 269 SER C O doub N N 270 SER C OXT sing N N 271 SER CB OG sing N N 272 SER CB HB2 sing N N 273 SER CB HB3 sing N N 274 SER OG HG sing N N 275 SER OXT HXT sing N N 276 SO4 S O1 doub N N 277 SO4 S O2 doub N N 278 SO4 S O3 sing N N 279 SO4 S O4 sing N N 280 THR N CA sing N N 281 THR N H sing N N 282 THR N H2 sing N N 283 THR CA C sing N N 284 THR CA CB sing N N 285 THR CA HA sing N N 286 THR C O doub N N 287 THR C OXT sing N N 288 THR CB OG1 sing N N 289 THR CB CG2 sing N N 290 THR CB HB sing N N 291 THR OG1 HG1 sing N N 292 THR CG2 HG21 sing N N 293 THR CG2 HG22 sing N N 294 THR CG2 HG23 sing N N 295 THR OXT HXT sing N N 296 TRP N CA sing N N 297 TRP N H sing N N 298 TRP N H2 sing N N 299 TRP CA C sing N N 300 TRP CA CB sing N N 301 TRP CA HA sing N N 302 TRP C O doub N N 303 TRP C OXT sing N N 304 TRP CB CG sing N N 305 TRP CB HB2 sing N N 306 TRP CB HB3 sing N N 307 TRP CG CD1 doub Y N 308 TRP CG CD2 sing Y N 309 TRP CD1 NE1 sing Y N 310 TRP CD1 HD1 sing N N 311 TRP CD2 CE2 doub Y N 312 TRP CD2 CE3 sing Y N 313 TRP NE1 CE2 sing Y N 314 TRP NE1 HE1 sing N N 315 TRP CE2 CZ2 sing Y N 316 TRP CE3 CZ3 doub Y N 317 TRP CE3 HE3 sing N N 318 TRP CZ2 CH2 doub Y N 319 TRP CZ2 HZ2 sing N N 320 TRP CZ3 CH2 sing Y N 321 TRP CZ3 HZ3 sing N N 322 TRP CH2 HH2 sing N N 323 TRP OXT HXT sing N N 324 TYR N CA sing N N 325 TYR N H sing N N 326 TYR N H2 sing N N 327 TYR CA C sing N N 328 TYR CA CB sing N N 329 TYR CA HA sing N N 330 TYR C O doub N N 331 TYR C OXT sing N N 332 TYR CB CG sing N N 333 TYR CB HB2 sing N N 334 TYR CB HB3 sing N N 335 TYR CG CD1 doub Y N 336 TYR CG CD2 sing Y N 337 TYR CD1 CE1 sing Y N 338 TYR CD1 HD1 sing N N 339 TYR CD2 CE2 doub Y N 340 TYR CD2 HD2 sing N N 341 TYR CE1 CZ doub Y N 342 TYR CE1 HE1 sing N N 343 TYR CE2 CZ sing Y N 344 TYR CE2 HE2 sing N N 345 TYR CZ OH sing N N 346 TYR OH HH sing N N 347 TYR OXT HXT sing N N 348 VAL N CA sing N N 349 VAL N H sing N N 350 VAL N H2 sing N N 351 VAL CA C sing N N 352 VAL CA CB sing N N 353 VAL CA HA sing N N 354 VAL C O doub N N 355 VAL C OXT sing N N 356 VAL CB CG1 sing N N 357 VAL CB CG2 sing N N 358 VAL CB HB sing N N 359 VAL CG1 HG11 sing N N 360 VAL CG1 HG12 sing N N 361 VAL CG1 HG13 sing N N 362 VAL CG2 HG21 sing N N 363 VAL CG2 HG22 sing N N 364 VAL CG2 HG23 sing N N 365 VAL OXT HXT sing N N 366 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4MMG _pdbx_initial_refinement_model.details ? #