data_4MLQ # _entry.id 4MLQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4MLQ RCSB RCSB082068 WWPDB D_1000082068 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 1PDA 'Structure of Escherichia coli porphobilinogen deaminase' unspecified PDB 4HTG 'Structure of Arabidopsis thaliana porphobilinogen deaminase' unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MLQ _pdbx_database_status.recvd_initial_deposition_date 2013-09-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Azim, N.' 1 'Deery, E.' 2 'Warren, M.J.' 3 'Erskine, P.' 4 'Cooper, J.B.' 5 'Coker, A.' 6 'Wood, S.P.' 7 'Akhtar, M.' 8 # _citation.id primary _citation.title ;Structural evidence for the partially oxidized dipyrromethene and dipyrromethanone forms of the cofactor of porphobilinogen deaminase: structures of the Bacillus megaterium enzyme at near-atomic resolution. ; _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 70 _citation.page_first 744 _citation.page_last 751 _citation.year 2014 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24598743 _citation.pdbx_database_id_DOI 10.1107/S139900471303294X # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Azim, N.' 1 primary 'Deery, E.' 2 primary 'Warren, M.J.' 3 primary 'Wolfenden, B.A.' 4 primary 'Erskine, P.' 5 primary 'Cooper, J.B.' 6 primary 'Coker, A.' 7 primary 'Wood, S.P.' 8 primary 'Akhtar, M.' 9 # _cell.entry_id 4MLQ _cell.length_a 53.010 _cell.length_b 65.120 _cell.length_c 96.780 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MLQ _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Porphobilinogen deaminase' 34512.770 1 2.5.1.61 ? 'porphobilinogen deaminase' ? 2 non-polymer syn '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' 420.413 1 ? ? ? ? 3 non-polymer syn ;3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid ; 436.413 1 ? ? ? ? 4 non-polymer syn 'ACETIC ACID' 60.052 1 ? ? ? ? 5 water nat water 18.015 249 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PBG, Hydroxymethylbilane synthase, Pre-uroporphyrinogen synthase' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SHMRKIIVGSRRSKLALTQTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVKEIEQAMLDKEIDMAVH SMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLK NEDYDAIILAAAGLSRMGWSKDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGKDPIAIGSEAAERLTSQGAKLLIDRVKEELDK ; _entity_poly.pdbx_seq_one_letter_code_can ;SHMRKIIVGSRRSKLALTQTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVKEIEQAMLDKEIDMAVH SMKDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLK NEDYDAIILAAAGLSRMGWSKDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEME GGCQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGKDPIAIGSEAAERLTSQGAKLLIDRVKEELDK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 HIS n 1 3 MET n 1 4 ARG n 1 5 LYS n 1 6 ILE n 1 7 ILE n 1 8 VAL n 1 9 GLY n 1 10 SER n 1 11 ARG n 1 12 ARG n 1 13 SER n 1 14 LYS n 1 15 LEU n 1 16 ALA n 1 17 LEU n 1 18 THR n 1 19 GLN n 1 20 THR n 1 21 LYS n 1 22 TRP n 1 23 VAL n 1 24 ILE n 1 25 GLU n 1 26 GLN n 1 27 LEU n 1 28 LYS n 1 29 LYS n 1 30 GLN n 1 31 GLY n 1 32 LEU n 1 33 PRO n 1 34 PHE n 1 35 GLU n 1 36 PHE n 1 37 GLU n 1 38 ILE n 1 39 LYS n 1 40 GLU n 1 41 MET n 1 42 VAL n 1 43 THR n 1 44 LYS n 1 45 GLY n 1 46 ASP n 1 47 GLN n 1 48 ILE n 1 49 LEU n 1 50 ASN n 1 51 VAL n 1 52 THR n 1 53 LEU n 1 54 SER n 1 55 LYS n 1 56 VAL n 1 57 GLY n 1 58 GLY n 1 59 LYS n 1 60 GLY n 1 61 LEU n 1 62 PHE n 1 63 VAL n 1 64 LYS n 1 65 GLU n 1 66 ILE n 1 67 GLU n 1 68 GLN n 1 69 ALA n 1 70 MET n 1 71 LEU n 1 72 ASP n 1 73 LYS n 1 74 GLU n 1 75 ILE n 1 76 ASP n 1 77 MET n 1 78 ALA n 1 79 VAL n 1 80 HIS n 1 81 SER n 1 82 MET n 1 83 LYS n 1 84 ASP n 1 85 MET n 1 86 PRO n 1 87 ALA n 1 88 VAL n 1 89 LEU n 1 90 PRO n 1 91 GLU n 1 92 GLY n 1 93 LEU n 1 94 THR n 1 95 ILE n 1 96 GLY n 1 97 CYS n 1 98 ILE n 1 99 PRO n 1 100 LEU n 1 101 ARG n 1 102 GLU n 1 103 ASP n 1 104 HIS n 1 105 ARG n 1 106 ASP n 1 107 ALA n 1 108 LEU n 1 109 ILE n 1 110 SER n 1 111 LYS n 1 112 ASN n 1 113 GLY n 1 114 GLU n 1 115 ARG n 1 116 PHE n 1 117 GLU n 1 118 GLU n 1 119 LEU n 1 120 PRO n 1 121 SER n 1 122 GLY n 1 123 ALA n 1 124 VAL n 1 125 ILE n 1 126 GLY n 1 127 THR n 1 128 SER n 1 129 SER n 1 130 LEU n 1 131 ARG n 1 132 ARG n 1 133 GLY n 1 134 ALA n 1 135 GLN n 1 136 LEU n 1 137 LEU n 1 138 SER n 1 139 MET n 1 140 ARG n 1 141 SER n 1 142 ASP n 1 143 ILE n 1 144 GLU n 1 145 ILE n 1 146 LYS n 1 147 TRP n 1 148 ILE n 1 149 ARG n 1 150 GLY n 1 151 ASN n 1 152 ILE n 1 153 ASP n 1 154 THR n 1 155 ARG n 1 156 LEU n 1 157 GLU n 1 158 LYS n 1 159 LEU n 1 160 LYS n 1 161 ASN n 1 162 GLU n 1 163 ASP n 1 164 TYR n 1 165 ASP n 1 166 ALA n 1 167 ILE n 1 168 ILE n 1 169 LEU n 1 170 ALA n 1 171 ALA n 1 172 ALA n 1 173 GLY n 1 174 LEU n 1 175 SER n 1 176 ARG n 1 177 MET n 1 178 GLY n 1 179 TRP n 1 180 SER n 1 181 LYS n 1 182 ASP n 1 183 THR n 1 184 VAL n 1 185 THR n 1 186 GLN n 1 187 TYR n 1 188 LEU n 1 189 GLU n 1 190 PRO n 1 191 GLU n 1 192 ILE n 1 193 SER n 1 194 VAL n 1 195 PRO n 1 196 ALA n 1 197 VAL n 1 198 GLY n 1 199 GLN n 1 200 GLY n 1 201 ALA n 1 202 LEU n 1 203 ALA n 1 204 ILE n 1 205 GLU n 1 206 CYS n 1 207 ARG n 1 208 GLU n 1 209 ASN n 1 210 ASP n 1 211 HIS n 1 212 GLU n 1 213 LEU n 1 214 LEU n 1 215 SER n 1 216 LEU n 1 217 LEU n 1 218 GLN n 1 219 ALA n 1 220 LEU n 1 221 ASN n 1 222 HIS n 1 223 ASP n 1 224 GLU n 1 225 THR n 1 226 ALA n 1 227 ARG n 1 228 ALA n 1 229 VAL n 1 230 ARG n 1 231 ALA n 1 232 GLU n 1 233 ARG n 1 234 VAL n 1 235 PHE n 1 236 LEU n 1 237 LYS n 1 238 GLU n 1 239 MET n 1 240 GLU n 1 241 GLY n 1 242 GLY n 1 243 CYS n 1 244 GLN n 1 245 VAL n 1 246 PRO n 1 247 ILE n 1 248 ALA n 1 249 GLY n 1 250 TYR n 1 251 GLY n 1 252 ARG n 1 253 ILE n 1 254 LEU n 1 255 ASP n 1 256 GLY n 1 257 GLY n 1 258 ASN n 1 259 ILE n 1 260 GLU n 1 261 LEU n 1 262 THR n 1 263 SER n 1 264 LEU n 1 265 VAL n 1 266 ALA n 1 267 SER n 1 268 PRO n 1 269 ASP n 1 270 GLY n 1 271 LYS n 1 272 THR n 1 273 ILE n 1 274 TYR n 1 275 LYS n 1 276 GLU n 1 277 HIS n 1 278 ILE n 1 279 THR n 1 280 GLY n 1 281 LYS n 1 282 ASP n 1 283 PRO n 1 284 ILE n 1 285 ALA n 1 286 ILE n 1 287 GLY n 1 288 SER n 1 289 GLU n 1 290 ALA n 1 291 ALA n 1 292 GLU n 1 293 ARG n 1 294 LEU n 1 295 THR n 1 296 SER n 1 297 GLN n 1 298 GLY n 1 299 ALA n 1 300 LYS n 1 301 LEU n 1 302 LEU n 1 303 ILE n 1 304 ASP n 1 305 ARG n 1 306 VAL n 1 307 LYS n 1 308 GLU n 1 309 GLU n 1 310 LEU n 1 311 ASP n 1 312 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene hemC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus megaterium' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1404 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'Rosetta DE3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET14b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8GCA8_BACME _struct_ref.pdbx_db_accession Q8GCA8 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRKIIVGSRRSKLALTQTKWVIEQLKKQGLPFEFEIKEMVTKGDQILNVTLSKVGGKGLFVKEIEQAMLDKEIDMAVHSM KDMPAVLPEGLTIGCIPLREDHRDALISKNGERFEELPSGAVIGTSSLRRGAQLLSMRSDIEIKWIRGNIDTRLEKLKNE DYDAIILAAAGLSRMGWSKDTVTQYLEPEISVPAVGQGALAIECRENDHELLSLLQALNHDETARAVRAERVFLKEMEGG CQVPIAGYGRILDGGNIELTSLVASPDGKTIYKEHITGKDPIAIGSEAAERLTSQGAKLLIDRVKEELDK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MLQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 312 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8GCA8 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 310 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 310 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MLQ SER A 1 ? UNP Q8GCA8 ? ? 'EXPRESSION TAG' -1 1 1 4MLQ HIS A 2 ? UNP Q8GCA8 ? ? 'EXPRESSION TAG' 0 2 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 29P non-polymer . ;3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid ; Dipyrromethanone 'C20 H24 N2 O9' 436.413 ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DPM non-polymer . '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' 'DIPYRROMETHANE COFACTOR' 'C20 H24 N2 O8' 420.413 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4MLQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.42 _exptl_crystal.density_percent_sol 49.17 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298.0 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range '6.5 - 6.8' _exptl_crystal_grow.pdbx_details '0.1M sodium cacodylate, 0.2M magnesium acetate, 25-30% PEG 8K, pH 6.5 - 6.8, VAPOR DIFFUSION, HANGING DROP, temperature 298.0K' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2013-04-03 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 channel' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.072 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM14' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM14 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.072 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4MLQ _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 31.33 _reflns.d_resolution_high 1.60 _reflns.number_obs 42866 _reflns.number_all 42866 _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs 0.088 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 10.1 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 6.4 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 88.7 _reflns_shell.Rmerge_I_obs 1.493 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.9 _reflns_shell.pdbx_redundancy 4.5 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4MLQ _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 40552 _refine.ls_number_reflns_all 42728 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 31.33 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 95.05 _refine.ls_R_factor_obs 0.16462 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.16061 _refine.ls_R_factor_R_free 0.24215 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 2176 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.973 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 28.019 _refine.aniso_B[1][1] -0.16 _refine.aniso_B[2][2] 0.47 _refine.aniso_B[3][3] -0.31 _refine.aniso_B[1][2] -0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model anisotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.102 _refine.pdbx_overall_ESU_R_Free 0.101 _refine.overall_SU_ML 0.086 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 5.939 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2245 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 65 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 2559 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 31.33 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.019 0.019 ? 2350 'X-RAY DIFFRACTION' ? r_bond_other_d 0.004 0.020 ? 2325 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.142 2.013 ? 3160 'X-RAY DIFFRACTION' ? r_angle_other_deg 1.526 3.006 ? 5378 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.180 5.000 ? 287 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 35.539 24.500 ? 100 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.100 15.000 ? 453 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.700 15.000 ? 19 'X-RAY DIFFRACTION' ? r_chiral_restr 0.121 0.200 ? 351 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.010 0.021 ? 2598 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 468 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 5.839 2.355 ? 1155 'X-RAY DIFFRACTION' ? r_mcbond_other 5.828 2.349 ? 1153 'X-RAY DIFFRACTION' ? r_mcangle_it 6.947 3.551 ? 1439 'X-RAY DIFFRACTION' ? r_mcangle_other 6.968 3.554 ? 1440 'X-RAY DIFFRACTION' ? r_scbond_it 7.874 2.966 ? 1195 'X-RAY DIFFRACTION' ? r_scbond_other 7.871 2.968 ? 1193 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other 8.648 4.246 ? 1721 'X-RAY DIFFRACTION' ? r_long_range_B_refined 8.563 20.506 ? 2738 'X-RAY DIFFRACTION' ? r_long_range_B_other 8.560 20.504 ? 2738 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 5.224 3.000 ? 4675 'X-RAY DIFFRACTION' ? r_sphericity_free 39.063 5.000 ? 105 'X-RAY DIFFRACTION' ? r_sphericity_bonded 19.976 5.000 ? 4790 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 2615 _refine_ls_shell.R_factor_R_work 0.380 _refine_ls_shell.percent_reflns_obs 84.53 _refine_ls_shell.R_factor_R_free 0.476 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 150 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 4MLQ _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 4MLQ _struct.title 'Crystal structure of Bacillus megaterium porphobilinogen deaminase' _struct.pdbx_descriptor 'Porphobilinogen deaminase (E.C.2.5.1.61)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MLQ _struct_keywords.pdbx_keywords TRANSFERASE _struct_keywords.text ;tetrapyrrole biosynthesis, porphobilinogen deaminase, dipyrromethane cofactor, three-domain fold, domains 1 and 2 resemble the fold of type II periplasmic binding proteins, pyrrole polymerisation, TRANSFERASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? LYS A 29 ? SER A 11 LYS A 27 1 ? 17 HELX_P HELX_P2 2 LYS A 64 ? ASP A 72 ? LYS A 62 ASP A 70 1 ? 9 HELX_P HELX_P3 3 LYS A 83 ? MET A 85 ? LYS A 81 MET A 83 5 ? 3 HELX_P HELX_P4 4 ARG A 115 ? LEU A 119 ? ARG A 113 LEU A 117 5 ? 5 HELX_P HELX_P5 5 SER A 129 ? ARG A 140 ? SER A 127 ARG A 138 1 ? 12 HELX_P HELX_P6 6 ASN A 151 ? GLU A 162 ? ASN A 149 GLU A 160 1 ? 12 HELX_P HELX_P7 7 ALA A 171 ? MET A 177 ? ALA A 169 MET A 175 1 ? 7 HELX_P HELX_P8 8 ASP A 210 ? ALA A 219 ? ASP A 208 ALA A 217 1 ? 10 HELX_P HELX_P9 9 HIS A 222 ? MET A 239 ? HIS A 220 MET A 237 1 ? 18 HELX_P HELX_P10 10 ASP A 282 ? GLY A 298 ? ASP A 280 GLY A 296 1 ? 17 HELX_P HELX_P11 11 GLY A 298 ? GLU A 309 ? GLY A 296 GLU A 307 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A CYS 243 SG ? ? ? 1_555 B DPM . CHA A ? A CYS 241 A DPM 401 1_555 ? ? ? ? ? ? ? 1.946 ? covale2 covale ? ? A CYS 243 SG ? ? ? 1_555 C 29P . CHA B ? A CYS 241 A 29P 402 1_555 ? ? ? ? ? ? ? 1.963 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? C ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 PHE A 34 ? GLU A 40 ? PHE A 32 GLU A 38 A 2 ARG A 4 ? SER A 10 ? ARG A 2 SER A 8 A 3 MET A 77 ? SER A 81 ? MET A 75 SER A 79 A 4 LEU A 202 ? ARG A 207 ? LEU A 200 ARG A 205 A 5 LEU A 93 ? CYS A 97 ? LEU A 91 CYS A 95 B 1 ILE A 143 ? LYS A 146 ? ILE A 141 LYS A 144 B 2 ALA A 123 ? GLY A 126 ? ALA A 121 GLY A 124 B 3 ALA A 166 ? ALA A 170 ? ALA A 164 ALA A 168 B 4 ASP A 106 ? SER A 110 ? ASP A 104 SER A 108 B 5 GLN A 186 ? TYR A 187 ? GLN A 184 TYR A 185 C 1 ILE A 247 ? ILE A 253 ? ILE A 245 ILE A 251 C 2 ILE A 259 ? ALA A 266 ? ILE A 257 ALA A 264 C 3 ILE A 273 ? GLY A 280 ? ILE A 271 GLY A 278 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLU A 35 ? O GLU A 33 N ILE A 6 ? N ILE A 4 A 2 3 N GLY A 9 ? N GLY A 7 O MET A 77 ? O MET A 75 A 3 4 N HIS A 80 ? N HIS A 78 O ALA A 203 ? O ALA A 201 A 4 5 O CYS A 206 ? O CYS A 204 N THR A 94 ? N THR A 92 B 1 2 O GLU A 144 ? O GLU A 142 N ILE A 125 ? N ILE A 123 B 2 3 N GLY A 126 ? N GLY A 124 O ALA A 166 ? O ALA A 164 B 3 4 O LEU A 169 ? O LEU A 167 N ALA A 107 ? N ALA A 105 B 4 5 N LEU A 108 ? N LEU A 106 O GLN A 186 ? O GLN A 184 C 1 2 N ALA A 248 ? N ALA A 246 O LEU A 264 ? O LEU A 262 C 2 3 N VAL A 265 ? N VAL A 263 O TYR A 274 ? O TYR A 272 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 17 'BINDING SITE FOR RESIDUE DPM A 401' AC2 Software ? ? ? ? 19 'BINDING SITE FOR RESIDUE 29P A 402' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE ACY A 403' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 17 SER A 81 ? SER A 79 . ? 1_555 ? 2 AC1 17 LYS A 83 ? LYS A 81 . ? 1_555 ? 3 AC1 17 ASP A 84 ? ASP A 82 . ? 1_555 ? 4 AC1 17 THR A 127 ? THR A 125 . ? 1_555 ? 5 AC1 17 SER A 128 ? SER A 126 . ? 1_555 ? 6 AC1 17 SER A 129 ? SER A 127 . ? 1_555 ? 7 AC1 17 ARG A 131 ? ARG A 129 . ? 1_555 ? 8 AC1 17 ARG A 132 ? ARG A 130 . ? 1_555 ? 9 AC1 17 ARG A 155 ? ARG A 153 . ? 1_555 ? 10 AC1 17 ALA A 170 ? ALA A 168 . ? 1_555 ? 11 AC1 17 ALA A 196 ? ALA A 194 . ? 1_555 ? 12 AC1 17 GLN A 199 ? GLN A 197 . ? 1_555 ? 13 AC1 17 GLY A 200 ? GLY A 198 . ? 1_555 ? 14 AC1 17 CYS A 243 ? CYS A 241 . ? 1_555 ? 15 AC1 17 HOH E . ? HOH A 536 . ? 1_555 ? 16 AC1 17 HOH E . ? HOH A 622 . ? 1_555 ? 17 AC1 17 HOH E . ? HOH A 688 . ? 1_555 ? 18 AC2 19 ARG A 11 ? ARG A 9 . ? 1_555 ? 19 AC2 19 SER A 13 ? SER A 11 . ? 1_555 ? 20 AC2 19 LEU A 15 ? LEU A 13 . ? 1_555 ? 21 AC2 19 LYS A 83 ? LYS A 81 . ? 1_555 ? 22 AC2 19 ASP A 84 ? ASP A 82 . ? 1_555 ? 23 AC2 19 THR A 127 ? THR A 125 . ? 1_555 ? 24 AC2 19 SER A 128 ? SER A 126 . ? 1_555 ? 25 AC2 19 SER A 129 ? SER A 127 . ? 1_555 ? 26 AC2 19 ARG A 131 ? ARG A 129 . ? 1_555 ? 27 AC2 19 ARG A 132 ? ARG A 130 . ? 1_555 ? 28 AC2 19 ARG A 149 ? ARG A 147 . ? 1_555 ? 29 AC2 19 GLY A 150 ? GLY A 148 . ? 1_555 ? 30 AC2 19 ASN A 151 ? ASN A 149 . ? 1_555 ? 31 AC2 19 ILE A 152 ? ILE A 150 . ? 1_555 ? 32 AC2 19 ARG A 155 ? ARG A 153 . ? 1_555 ? 33 AC2 19 ALA A 196 ? ALA A 194 . ? 1_555 ? 34 AC2 19 CYS A 243 ? CYS A 241 . ? 1_555 ? 35 AC2 19 HOH E . ? HOH A 526 . ? 1_555 ? 36 AC2 19 HOH E . ? HOH A 618 . ? 1_555 ? 37 AC3 3 PHE A 36 ? PHE A 34 . ? 1_555 ? 38 AC3 3 ILE A 38 ? ILE A 36 . ? 1_555 ? 39 AC3 3 ARG A 305 ? ARG A 303 . ? 1_655 ? # _database_PDB_matrix.entry_id 4MLQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4MLQ _atom_sites.fract_transf_matrix[1][1] 0.018864 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015356 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010333 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 -1 SER SER A . n A 1 2 HIS 2 0 0 HIS HIS A . n A 1 3 MET 3 1 1 MET MET A . n A 1 4 ARG 4 2 2 ARG ARG A . n A 1 5 LYS 5 3 3 LYS LYS A . n A 1 6 ILE 6 4 4 ILE ILE A . n A 1 7 ILE 7 5 5 ILE ILE A . n A 1 8 VAL 8 6 6 VAL VAL A . n A 1 9 GLY 9 7 7 GLY GLY A . n A 1 10 SER 10 8 8 SER SER A . n A 1 11 ARG 11 9 9 ARG ARG A . n A 1 12 ARG 12 10 10 ARG ARG A . n A 1 13 SER 13 11 11 SER SER A . n A 1 14 LYS 14 12 12 LYS LYS A . n A 1 15 LEU 15 13 13 LEU LEU A . n A 1 16 ALA 16 14 14 ALA ALA A . n A 1 17 LEU 17 15 15 LEU LEU A . n A 1 18 THR 18 16 16 THR THR A . n A 1 19 GLN 19 17 17 GLN GLN A . n A 1 20 THR 20 18 18 THR THR A . n A 1 21 LYS 21 19 19 LYS LYS A . n A 1 22 TRP 22 20 20 TRP TRP A . n A 1 23 VAL 23 21 21 VAL VAL A . n A 1 24 ILE 24 22 22 ILE ILE A . n A 1 25 GLU 25 23 23 GLU GLU A . n A 1 26 GLN 26 24 24 GLN GLN A . n A 1 27 LEU 27 25 25 LEU LEU A . n A 1 28 LYS 28 26 26 LYS LYS A . n A 1 29 LYS 29 27 27 LYS LYS A . n A 1 30 GLN 30 28 28 GLN GLN A . n A 1 31 GLY 31 29 29 GLY GLY A . n A 1 32 LEU 32 30 30 LEU LEU A . n A 1 33 PRO 33 31 31 PRO PRO A . n A 1 34 PHE 34 32 32 PHE PHE A . n A 1 35 GLU 35 33 33 GLU GLU A . n A 1 36 PHE 36 34 34 PHE PHE A . n A 1 37 GLU 37 35 35 GLU GLU A . n A 1 38 ILE 38 36 36 ILE ILE A . n A 1 39 LYS 39 37 37 LYS LYS A . n A 1 40 GLU 40 38 38 GLU GLU A . n A 1 41 MET 41 39 39 MET MET A . n A 1 42 VAL 42 40 ? ? ? A . n A 1 43 THR 43 41 ? ? ? A . n A 1 44 LYS 44 42 ? ? ? A . n A 1 45 GLY 45 43 ? ? ? A . n A 1 46 ASP 46 44 ? ? ? A . n A 1 47 GLN 47 45 ? ? ? A . n A 1 48 ILE 48 46 ? ? ? A . n A 1 49 LEU 49 47 ? ? ? A . n A 1 50 ASN 50 48 ? ? ? A . n A 1 51 VAL 51 49 ? ? ? A . n A 1 52 THR 52 50 ? ? ? A . n A 1 53 LEU 53 51 ? ? ? A . n A 1 54 SER 54 52 ? ? ? A . n A 1 55 LYS 55 53 ? ? ? A . n A 1 56 VAL 56 54 ? ? ? A . n A 1 57 GLY 57 55 ? ? ? A . n A 1 58 GLY 58 56 ? ? ? A . n A 1 59 LYS 59 57 ? ? ? A . n A 1 60 GLY 60 58 ? ? ? A . n A 1 61 LEU 61 59 ? ? ? A . n A 1 62 PHE 62 60 ? ? ? A . n A 1 63 VAL 63 61 61 VAL VAL A . n A 1 64 LYS 64 62 62 LYS LYS A . n A 1 65 GLU 65 63 63 GLU GLU A . n A 1 66 ILE 66 64 64 ILE ILE A . n A 1 67 GLU 67 65 65 GLU GLU A . n A 1 68 GLN 68 66 66 GLN GLN A . n A 1 69 ALA 69 67 67 ALA ALA A . n A 1 70 MET 70 68 68 MET MET A . n A 1 71 LEU 71 69 69 LEU LEU A . n A 1 72 ASP 72 70 70 ASP ASP A . n A 1 73 LYS 73 71 71 LYS LYS A . n A 1 74 GLU 74 72 72 GLU GLU A . n A 1 75 ILE 75 73 73 ILE ILE A . n A 1 76 ASP 76 74 74 ASP ASP A . n A 1 77 MET 77 75 75 MET MET A . n A 1 78 ALA 78 76 76 ALA ALA A . n A 1 79 VAL 79 77 77 VAL VAL A . n A 1 80 HIS 80 78 78 HIS HIS A . n A 1 81 SER 81 79 79 SER SER A . n A 1 82 MET 82 80 80 MET MET A . n A 1 83 LYS 83 81 81 LYS LYS A . n A 1 84 ASP 84 82 82 ASP ASP A . n A 1 85 MET 85 83 83 MET MET A . n A 1 86 PRO 86 84 84 PRO PRO A . n A 1 87 ALA 87 85 85 ALA ALA A . n A 1 88 VAL 88 86 86 VAL VAL A . n A 1 89 LEU 89 87 87 LEU LEU A . n A 1 90 PRO 90 88 88 PRO PRO A . n A 1 91 GLU 91 89 89 GLU GLU A . n A 1 92 GLY 92 90 90 GLY GLY A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 THR 94 92 92 THR THR A . n A 1 95 ILE 95 93 93 ILE ILE A . n A 1 96 GLY 96 94 94 GLY GLY A . n A 1 97 CYS 97 95 95 CYS CYS A . n A 1 98 ILE 98 96 96 ILE ILE A . n A 1 99 PRO 99 97 97 PRO PRO A . n A 1 100 LEU 100 98 98 LEU LEU A . n A 1 101 ARG 101 99 99 ARG ARG A . n A 1 102 GLU 102 100 100 GLU GLU A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 HIS 104 102 102 HIS HIS A . n A 1 105 ARG 105 103 103 ARG ARG A . n A 1 106 ASP 106 104 104 ASP ASP A . n A 1 107 ALA 107 105 105 ALA ALA A . n A 1 108 LEU 108 106 106 LEU LEU A . n A 1 109 ILE 109 107 107 ILE ILE A . n A 1 110 SER 110 108 108 SER SER A . n A 1 111 LYS 111 109 109 LYS LYS A . n A 1 112 ASN 112 110 110 ASN ASN A . n A 1 113 GLY 113 111 111 GLY GLY A . n A 1 114 GLU 114 112 112 GLU GLU A . n A 1 115 ARG 115 113 113 ARG ARG A . n A 1 116 PHE 116 114 114 PHE PHE A . n A 1 117 GLU 117 115 115 GLU GLU A . n A 1 118 GLU 118 116 116 GLU GLU A . n A 1 119 LEU 119 117 117 LEU LEU A . n A 1 120 PRO 120 118 118 PRO PRO A . n A 1 121 SER 121 119 119 SER SER A . n A 1 122 GLY 122 120 120 GLY GLY A . n A 1 123 ALA 123 121 121 ALA ALA A . n A 1 124 VAL 124 122 122 VAL VAL A . n A 1 125 ILE 125 123 123 ILE ILE A . n A 1 126 GLY 126 124 124 GLY GLY A . n A 1 127 THR 127 125 125 THR THR A . n A 1 128 SER 128 126 126 SER SER A . n A 1 129 SER 129 127 127 SER SER A . n A 1 130 LEU 130 128 128 LEU LEU A . n A 1 131 ARG 131 129 129 ARG ARG A . n A 1 132 ARG 132 130 130 ARG ARG A . n A 1 133 GLY 133 131 131 GLY GLY A . n A 1 134 ALA 134 132 132 ALA ALA A . n A 1 135 GLN 135 133 133 GLN GLN A . n A 1 136 LEU 136 134 134 LEU LEU A . n A 1 137 LEU 137 135 135 LEU LEU A . n A 1 138 SER 138 136 136 SER SER A . n A 1 139 MET 139 137 137 MET MET A . n A 1 140 ARG 140 138 138 ARG ARG A . n A 1 141 SER 141 139 139 SER SER A . n A 1 142 ASP 142 140 140 ASP ASP A . n A 1 143 ILE 143 141 141 ILE ILE A . n A 1 144 GLU 144 142 142 GLU GLU A . n A 1 145 ILE 145 143 143 ILE ILE A . n A 1 146 LYS 146 144 144 LYS LYS A . n A 1 147 TRP 147 145 145 TRP TRP A . n A 1 148 ILE 148 146 146 ILE ILE A . n A 1 149 ARG 149 147 147 ARG ARG A . n A 1 150 GLY 150 148 148 GLY GLY A . n A 1 151 ASN 151 149 149 ASN ASN A . n A 1 152 ILE 152 150 150 ILE ILE A . n A 1 153 ASP 153 151 151 ASP ASP A . n A 1 154 THR 154 152 152 THR THR A . n A 1 155 ARG 155 153 153 ARG ARG A . n A 1 156 LEU 156 154 154 LEU LEU A . n A 1 157 GLU 157 155 155 GLU GLU A . n A 1 158 LYS 158 156 156 LYS LYS A . n A 1 159 LEU 159 157 157 LEU LEU A . n A 1 160 LYS 160 158 158 LYS LYS A . n A 1 161 ASN 161 159 159 ASN ASN A . n A 1 162 GLU 162 160 160 GLU GLU A . n A 1 163 ASP 163 161 161 ASP ASP A . n A 1 164 TYR 164 162 162 TYR TYR A . n A 1 165 ASP 165 163 163 ASP ASP A . n A 1 166 ALA 166 164 164 ALA ALA A . n A 1 167 ILE 167 165 165 ILE ILE A . n A 1 168 ILE 168 166 166 ILE ILE A . n A 1 169 LEU 169 167 167 LEU LEU A . n A 1 170 ALA 170 168 168 ALA ALA A . n A 1 171 ALA 171 169 169 ALA ALA A . n A 1 172 ALA 172 170 170 ALA ALA A . n A 1 173 GLY 173 171 171 GLY GLY A . n A 1 174 LEU 174 172 172 LEU LEU A . n A 1 175 SER 175 173 173 SER SER A . n A 1 176 ARG 176 174 174 ARG ARG A . n A 1 177 MET 177 175 175 MET MET A . n A 1 178 GLY 178 176 176 GLY GLY A . n A 1 179 TRP 179 177 177 TRP TRP A . n A 1 180 SER 180 178 178 SER SER A . n A 1 181 LYS 181 179 179 LYS LYS A . n A 1 182 ASP 182 180 180 ASP ASP A . n A 1 183 THR 183 181 181 THR THR A . n A 1 184 VAL 184 182 182 VAL VAL A . n A 1 185 THR 185 183 183 THR THR A . n A 1 186 GLN 186 184 184 GLN GLN A . n A 1 187 TYR 187 185 185 TYR TYR A . n A 1 188 LEU 188 186 186 LEU LEU A . n A 1 189 GLU 189 187 187 GLU GLU A . n A 1 190 PRO 190 188 188 PRO PRO A . n A 1 191 GLU 191 189 189 GLU GLU A . n A 1 192 ILE 192 190 190 ILE ILE A . n A 1 193 SER 193 191 191 SER SER A . n A 1 194 VAL 194 192 192 VAL VAL A . n A 1 195 PRO 195 193 193 PRO PRO A . n A 1 196 ALA 196 194 194 ALA ALA A . n A 1 197 VAL 197 195 195 VAL VAL A . n A 1 198 GLY 198 196 196 GLY GLY A . n A 1 199 GLN 199 197 197 GLN GLN A . n A 1 200 GLY 200 198 198 GLY GLY A . n A 1 201 ALA 201 199 199 ALA ALA A . n A 1 202 LEU 202 200 200 LEU LEU A . n A 1 203 ALA 203 201 201 ALA ALA A . n A 1 204 ILE 204 202 202 ILE ILE A . n A 1 205 GLU 205 203 203 GLU GLU A . n A 1 206 CYS 206 204 204 CYS CYS A . n A 1 207 ARG 207 205 205 ARG ARG A . n A 1 208 GLU 208 206 206 GLU GLU A . n A 1 209 ASN 209 207 207 ASN ASN A . n A 1 210 ASP 210 208 208 ASP ASP A . n A 1 211 HIS 211 209 209 HIS HIS A . n A 1 212 GLU 212 210 210 GLU GLU A . n A 1 213 LEU 213 211 211 LEU LEU A . n A 1 214 LEU 214 212 212 LEU LEU A . n A 1 215 SER 215 213 213 SER SER A . n A 1 216 LEU 216 214 214 LEU LEU A . n A 1 217 LEU 217 215 215 LEU LEU A . n A 1 218 GLN 218 216 216 GLN GLN A . n A 1 219 ALA 219 217 217 ALA ALA A . n A 1 220 LEU 220 218 218 LEU LEU A . n A 1 221 ASN 221 219 219 ASN ASN A . n A 1 222 HIS 222 220 220 HIS HIS A . n A 1 223 ASP 223 221 221 ASP ASP A . n A 1 224 GLU 224 222 222 GLU GLU A . n A 1 225 THR 225 223 223 THR THR A . n A 1 226 ALA 226 224 224 ALA ALA A . n A 1 227 ARG 227 225 225 ARG ARG A . n A 1 228 ALA 228 226 226 ALA ALA A . n A 1 229 VAL 229 227 227 VAL VAL A . n A 1 230 ARG 230 228 228 ARG ARG A . n A 1 231 ALA 231 229 229 ALA ALA A . n A 1 232 GLU 232 230 230 GLU GLU A . n A 1 233 ARG 233 231 231 ARG ARG A . n A 1 234 VAL 234 232 232 VAL VAL A . n A 1 235 PHE 235 233 233 PHE PHE A . n A 1 236 LEU 236 234 234 LEU LEU A . n A 1 237 LYS 237 235 235 LYS LYS A . n A 1 238 GLU 238 236 236 GLU GLU A . n A 1 239 MET 239 237 237 MET MET A . n A 1 240 GLU 240 238 238 GLU GLU A . n A 1 241 GLY 241 239 239 GLY GLY A . n A 1 242 GLY 242 240 240 GLY GLY A . n A 1 243 CYS 243 241 241 CYS CYS A . n A 1 244 GLN 244 242 242 GLN GLN A . n A 1 245 VAL 245 243 243 VAL VAL A . n A 1 246 PRO 246 244 244 PRO PRO A . n A 1 247 ILE 247 245 245 ILE ILE A . n A 1 248 ALA 248 246 246 ALA ALA A . n A 1 249 GLY 249 247 247 GLY GLY A . n A 1 250 TYR 250 248 248 TYR TYR A . n A 1 251 GLY 251 249 249 GLY GLY A . n A 1 252 ARG 252 250 250 ARG ARG A . n A 1 253 ILE 253 251 251 ILE ILE A . n A 1 254 LEU 254 252 252 LEU LEU A . n A 1 255 ASP 255 253 253 ASP ASP A . n A 1 256 GLY 256 254 254 GLY GLY A . n A 1 257 GLY 257 255 255 GLY GLY A . n A 1 258 ASN 258 256 256 ASN ASN A . n A 1 259 ILE 259 257 257 ILE ILE A . n A 1 260 GLU 260 258 258 GLU GLU A . n A 1 261 LEU 261 259 259 LEU LEU A . n A 1 262 THR 262 260 260 THR THR A . n A 1 263 SER 263 261 261 SER SER A . n A 1 264 LEU 264 262 262 LEU LEU A . n A 1 265 VAL 265 263 263 VAL VAL A . n A 1 266 ALA 266 264 264 ALA ALA A . n A 1 267 SER 267 265 265 SER SER A . n A 1 268 PRO 268 266 266 PRO PRO A . n A 1 269 ASP 269 267 267 ASP ASP A . n A 1 270 GLY 270 268 268 GLY GLY A . n A 1 271 LYS 271 269 269 LYS LYS A . n A 1 272 THR 272 270 270 THR THR A . n A 1 273 ILE 273 271 271 ILE ILE A . n A 1 274 TYR 274 272 272 TYR TYR A . n A 1 275 LYS 275 273 273 LYS LYS A . n A 1 276 GLU 276 274 274 GLU GLU A . n A 1 277 HIS 277 275 275 HIS HIS A . n A 1 278 ILE 278 276 276 ILE ILE A . n A 1 279 THR 279 277 277 THR THR A . n A 1 280 GLY 280 278 278 GLY GLY A . n A 1 281 LYS 281 279 279 LYS LYS A . n A 1 282 ASP 282 280 280 ASP ASP A . n A 1 283 PRO 283 281 281 PRO PRO A . n A 1 284 ILE 284 282 282 ILE ILE A . n A 1 285 ALA 285 283 283 ALA ALA A . n A 1 286 ILE 286 284 284 ILE ILE A . n A 1 287 GLY 287 285 285 GLY GLY A . n A 1 288 SER 288 286 286 SER SER A . n A 1 289 GLU 289 287 287 GLU GLU A . n A 1 290 ALA 290 288 288 ALA ALA A . n A 1 291 ALA 291 289 289 ALA ALA A . n A 1 292 GLU 292 290 290 GLU GLU A . n A 1 293 ARG 293 291 291 ARG ARG A . n A 1 294 LEU 294 292 292 LEU LEU A . n A 1 295 THR 295 293 293 THR THR A . n A 1 296 SER 296 294 294 SER SER A . n A 1 297 GLN 297 295 295 GLN GLN A . n A 1 298 GLY 298 296 296 GLY GLY A . n A 1 299 ALA 299 297 297 ALA ALA A . n A 1 300 LYS 300 298 298 LYS LYS A . n A 1 301 LEU 301 299 299 LEU LEU A . n A 1 302 LEU 302 300 300 LEU LEU A . n A 1 303 ILE 303 301 301 ILE ILE A . n A 1 304 ASP 304 302 302 ASP ASP A . n A 1 305 ARG 305 303 303 ARG ARG A . n A 1 306 VAL 306 304 304 VAL VAL A . n A 1 307 LYS 307 305 305 LYS LYS A . n A 1 308 GLU 308 306 306 GLU GLU A . n A 1 309 GLU 309 307 307 GLU GLU A . n A 1 310 LEU 310 308 308 LEU LEU A . n A 1 311 ASP 311 309 ? ? ? A . n A 1 312 LYS 312 310 ? ? ? A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2014-04-02 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 MOLREP phasing . ? 2 REFMAC refinement 5.7.0032 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 103 ? ? CZ A ARG 103 ? ? NH2 A ARG 103 ? ? 116.88 120.30 -3.42 0.50 N 2 1 NE A ARG 231 ? ? CZ A ARG 231 ? ? NH1 A ARG 231 ? ? 116.99 120.30 -3.31 0.50 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A VAL 40 ? A VAL 42 2 1 Y 1 A THR 41 ? A THR 43 3 1 Y 1 A LYS 42 ? A LYS 44 4 1 Y 1 A GLY 43 ? A GLY 45 5 1 Y 1 A ASP 44 ? A ASP 46 6 1 Y 1 A GLN 45 ? A GLN 47 7 1 Y 1 A ILE 46 ? A ILE 48 8 1 Y 1 A LEU 47 ? A LEU 49 9 1 Y 1 A ASN 48 ? A ASN 50 10 1 Y 1 A VAL 49 ? A VAL 51 11 1 Y 1 A THR 50 ? A THR 52 12 1 Y 1 A LEU 51 ? A LEU 53 13 1 Y 1 A SER 52 ? A SER 54 14 1 Y 1 A LYS 53 ? A LYS 55 15 1 Y 1 A VAL 54 ? A VAL 56 16 1 Y 1 A GLY 55 ? A GLY 57 17 1 Y 1 A GLY 56 ? A GLY 58 18 1 Y 1 A LYS 57 ? A LYS 59 19 1 Y 1 A GLY 58 ? A GLY 60 20 1 Y 1 A LEU 59 ? A LEU 61 21 1 Y 1 A PHE 60 ? A PHE 62 22 1 Y 1 A ASP 309 ? A ASP 311 23 1 Y 1 A LYS 310 ? A LYS 312 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-[5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-1H-pyrrol-3-yl]propanoic acid' DPM 3 ;3-[(5S)-5-{[3-(2-carboxyethyl)-4-(carboxymethyl)-5-methyl-1H-pyrrol-2-yl]methyl}-4-(carboxymethyl)-2-oxo-2,5-dihydro-1H-pyrrol-3-yl]propanoic acid ; 29P 4 'ACETIC ACID' ACY 5 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DPM 1 401 402 DPM DPM A . C 3 29P 1 402 403 29P DPN A . D 4 ACY 1 403 401 ACY ACY A . E 5 HOH 1 501 501 HOH HOH A . E 5 HOH 2 502 502 HOH HOH A . E 5 HOH 3 503 503 HOH HOH A . E 5 HOH 4 504 504 HOH HOH A . E 5 HOH 5 505 505 HOH HOH A . E 5 HOH 6 506 506 HOH HOH A . E 5 HOH 7 507 507 HOH HOH A . E 5 HOH 8 508 508 HOH HOH A . E 5 HOH 9 509 509 HOH HOH A . E 5 HOH 10 510 510 HOH HOH A . E 5 HOH 11 511 511 HOH HOH A . E 5 HOH 12 512 512 HOH HOH A . E 5 HOH 13 513 513 HOH HOH A . E 5 HOH 14 514 514 HOH HOH A . E 5 HOH 15 515 515 HOH HOH A . E 5 HOH 16 516 516 HOH HOH A . E 5 HOH 17 517 517 HOH HOH A . E 5 HOH 18 518 518 HOH HOH A . E 5 HOH 19 519 519 HOH HOH A . E 5 HOH 20 520 520 HOH HOH A . E 5 HOH 21 521 521 HOH HOH A . E 5 HOH 22 522 522 HOH HOH A . E 5 HOH 23 523 523 HOH HOH A . E 5 HOH 24 524 524 HOH HOH A . E 5 HOH 25 525 525 HOH HOH A . E 5 HOH 26 526 526 HOH HOH A . E 5 HOH 27 527 527 HOH HOH A . E 5 HOH 28 528 528 HOH HOH A . E 5 HOH 29 529 529 HOH HOH A . E 5 HOH 30 530 530 HOH HOH A . E 5 HOH 31 531 531 HOH HOH A . E 5 HOH 32 532 532 HOH HOH A . E 5 HOH 33 533 533 HOH HOH A . E 5 HOH 34 534 534 HOH HOH A . E 5 HOH 35 535 535 HOH HOH A . E 5 HOH 36 536 536 HOH HOH A . E 5 HOH 37 537 537 HOH HOH A . E 5 HOH 38 538 538 HOH HOH A . E 5 HOH 39 539 539 HOH HOH A . E 5 HOH 40 540 540 HOH HOH A . E 5 HOH 41 541 541 HOH HOH A . E 5 HOH 42 542 542 HOH HOH A . E 5 HOH 43 543 543 HOH HOH A . E 5 HOH 44 544 544 HOH HOH A . E 5 HOH 45 545 545 HOH HOH A . E 5 HOH 46 546 546 HOH HOH A . E 5 HOH 47 547 547 HOH HOH A . E 5 HOH 48 548 548 HOH HOH A . E 5 HOH 49 549 549 HOH HOH A . E 5 HOH 50 550 550 HOH HOH A . E 5 HOH 51 551 551 HOH HOH A . E 5 HOH 52 552 552 HOH HOH A . E 5 HOH 53 553 553 HOH HOH A . E 5 HOH 54 554 554 HOH HOH A . E 5 HOH 55 555 555 HOH HOH A . E 5 HOH 56 556 556 HOH HOH A . E 5 HOH 57 557 557 HOH HOH A . E 5 HOH 58 558 558 HOH HOH A . E 5 HOH 59 559 559 HOH HOH A . E 5 HOH 60 560 560 HOH HOH A . E 5 HOH 61 561 561 HOH HOH A . E 5 HOH 62 562 562 HOH HOH A . E 5 HOH 63 563 563 HOH HOH A . E 5 HOH 64 564 564 HOH HOH A . E 5 HOH 65 565 565 HOH HOH A . E 5 HOH 66 566 566 HOH HOH A . E 5 HOH 67 567 567 HOH HOH A . E 5 HOH 68 568 568 HOH HOH A . E 5 HOH 69 569 569 HOH HOH A . E 5 HOH 70 570 570 HOH HOH A . E 5 HOH 71 571 571 HOH HOH A . E 5 HOH 72 572 572 HOH HOH A . E 5 HOH 73 573 573 HOH HOH A . E 5 HOH 74 574 574 HOH HOH A . E 5 HOH 75 575 575 HOH HOH A . E 5 HOH 76 576 576 HOH HOH A . E 5 HOH 77 577 577 HOH HOH A . E 5 HOH 78 578 578 HOH HOH A . E 5 HOH 79 579 579 HOH HOH A . E 5 HOH 80 580 580 HOH HOH A . E 5 HOH 81 581 581 HOH HOH A . E 5 HOH 82 582 582 HOH HOH A . E 5 HOH 83 583 583 HOH HOH A . E 5 HOH 84 584 584 HOH HOH A . E 5 HOH 85 585 585 HOH HOH A . E 5 HOH 86 586 586 HOH HOH A . E 5 HOH 87 587 587 HOH HOH A . E 5 HOH 88 588 588 HOH HOH A . E 5 HOH 89 589 589 HOH HOH A . E 5 HOH 90 590 590 HOH HOH A . E 5 HOH 91 591 591 HOH HOH A . E 5 HOH 92 592 592 HOH HOH A . E 5 HOH 93 593 593 HOH HOH A . E 5 HOH 94 594 594 HOH HOH A . E 5 HOH 95 595 595 HOH HOH A . E 5 HOH 96 596 596 HOH HOH A . E 5 HOH 97 597 597 HOH HOH A . E 5 HOH 98 598 598 HOH HOH A . E 5 HOH 99 599 599 HOH HOH A . E 5 HOH 100 600 600 HOH HOH A . E 5 HOH 101 601 601 HOH HOH A . E 5 HOH 102 602 602 HOH HOH A . E 5 HOH 103 603 603 HOH HOH A . E 5 HOH 104 604 604 HOH HOH A . E 5 HOH 105 605 605 HOH HOH A . E 5 HOH 106 606 606 HOH HOH A . E 5 HOH 107 607 607 HOH HOH A . E 5 HOH 108 608 608 HOH HOH A . E 5 HOH 109 609 609 HOH HOH A . E 5 HOH 110 610 610 HOH HOH A . E 5 HOH 111 611 611 HOH HOH A . E 5 HOH 112 612 612 HOH HOH A . E 5 HOH 113 613 613 HOH HOH A . E 5 HOH 114 614 614 HOH HOH A . E 5 HOH 115 615 615 HOH HOH A . E 5 HOH 116 616 616 HOH HOH A . E 5 HOH 117 617 617 HOH HOH A . E 5 HOH 118 618 618 HOH HOH A . E 5 HOH 119 619 619 HOH HOH A . E 5 HOH 120 620 620 HOH HOH A . E 5 HOH 121 621 621 HOH HOH A . E 5 HOH 122 622 622 HOH HOH A . E 5 HOH 123 623 623 HOH HOH A . E 5 HOH 124 624 624 HOH HOH A . E 5 HOH 125 625 625 HOH HOH A . E 5 HOH 126 626 626 HOH HOH A . E 5 HOH 127 627 627 HOH HOH A . E 5 HOH 128 628 628 HOH HOH A . E 5 HOH 129 629 629 HOH HOH A . E 5 HOH 130 630 630 HOH HOH A . E 5 HOH 131 631 631 HOH HOH A . E 5 HOH 132 632 632 HOH HOH A . E 5 HOH 133 633 633 HOH HOH A . E 5 HOH 134 634 634 HOH HOH A . E 5 HOH 135 635 635 HOH HOH A . E 5 HOH 136 636 636 HOH HOH A . E 5 HOH 137 637 637 HOH HOH A . E 5 HOH 138 638 638 HOH HOH A . E 5 HOH 139 639 639 HOH HOH A . E 5 HOH 140 640 640 HOH HOH A . E 5 HOH 141 641 641 HOH HOH A . E 5 HOH 142 642 642 HOH HOH A . E 5 HOH 143 643 643 HOH HOH A . E 5 HOH 144 644 644 HOH HOH A . E 5 HOH 145 645 645 HOH HOH A . E 5 HOH 146 646 646 HOH HOH A . E 5 HOH 147 647 647 HOH HOH A . E 5 HOH 148 648 648 HOH HOH A . E 5 HOH 149 649 649 HOH HOH A . E 5 HOH 150 650 650 HOH HOH A . E 5 HOH 151 651 651 HOH HOH A . E 5 HOH 152 652 652 HOH HOH A . E 5 HOH 153 653 653 HOH HOH A . E 5 HOH 154 654 654 HOH HOH A . E 5 HOH 155 655 655 HOH HOH A . E 5 HOH 156 656 656 HOH HOH A . E 5 HOH 157 657 657 HOH HOH A . E 5 HOH 158 658 658 HOH HOH A . E 5 HOH 159 659 659 HOH HOH A . E 5 HOH 160 660 660 HOH HOH A . E 5 HOH 161 661 661 HOH HOH A . E 5 HOH 162 662 662 HOH HOH A . E 5 HOH 163 663 663 HOH HOH A . E 5 HOH 164 664 664 HOH HOH A . E 5 HOH 165 665 665 HOH HOH A . E 5 HOH 166 666 666 HOH HOH A . E 5 HOH 167 667 667 HOH HOH A . E 5 HOH 168 668 668 HOH HOH A . E 5 HOH 169 669 669 HOH HOH A . E 5 HOH 170 670 670 HOH HOH A . E 5 HOH 171 671 671 HOH HOH A . E 5 HOH 172 672 672 HOH HOH A . E 5 HOH 173 673 673 HOH HOH A . E 5 HOH 174 674 674 HOH HOH A . E 5 HOH 175 675 675 HOH HOH A . E 5 HOH 176 676 676 HOH HOH A . E 5 HOH 177 677 677 HOH HOH A . E 5 HOH 178 678 678 HOH HOH A . E 5 HOH 179 679 679 HOH HOH A . E 5 HOH 180 680 680 HOH HOH A . E 5 HOH 181 681 681 HOH HOH A . E 5 HOH 182 682 682 HOH HOH A . E 5 HOH 183 683 683 HOH HOH A . E 5 HOH 184 684 684 HOH HOH A . E 5 HOH 185 685 685 HOH HOH A . E 5 HOH 186 686 686 HOH HOH A . E 5 HOH 187 687 687 HOH HOH A . E 5 HOH 188 688 688 HOH HOH A . E 5 HOH 189 689 689 HOH HOH A . E 5 HOH 190 690 690 HOH HOH A . E 5 HOH 191 691 691 HOH HOH A . E 5 HOH 192 692 692 HOH HOH A . E 5 HOH 193 693 693 HOH HOH A . E 5 HOH 194 694 694 HOH HOH A . E 5 HOH 195 695 695 HOH HOH A . E 5 HOH 196 696 696 HOH HOH A . E 5 HOH 197 697 697 HOH HOH A . E 5 HOH 198 698 698 HOH HOH A . E 5 HOH 199 699 699 HOH HOH A . E 5 HOH 200 700 700 HOH HOH A . E 5 HOH 201 701 701 HOH HOH A . E 5 HOH 202 702 702 HOH HOH A . E 5 HOH 203 703 703 HOH HOH A . E 5 HOH 204 704 704 HOH HOH A . E 5 HOH 205 705 705 HOH HOH A . E 5 HOH 206 706 706 HOH HOH A . E 5 HOH 207 707 707 HOH HOH A . E 5 HOH 208 708 708 HOH HOH A . E 5 HOH 209 709 709 HOH HOH A . E 5 HOH 210 710 710 HOH HOH A . E 5 HOH 211 711 711 HOH HOH A . E 5 HOH 212 712 712 HOH HOH A . E 5 HOH 213 713 713 HOH HOH A . E 5 HOH 214 714 714 HOH HOH A . E 5 HOH 215 715 715 HOH HOH A . E 5 HOH 216 716 716 HOH HOH A . E 5 HOH 217 717 717 HOH HOH A . E 5 HOH 218 718 718 HOH HOH A . E 5 HOH 219 719 719 HOH HOH A . E 5 HOH 220 720 720 HOH HOH A . E 5 HOH 221 721 721 HOH HOH A . E 5 HOH 222 722 722 HOH HOH A . E 5 HOH 223 723 723 HOH HOH A . E 5 HOH 224 724 724 HOH HOH A . E 5 HOH 225 725 725 HOH HOH A . E 5 HOH 226 726 726 HOH HOH A . E 5 HOH 227 727 727 HOH HOH A . E 5 HOH 228 728 728 HOH HOH A . E 5 HOH 229 729 729 HOH HOH A . E 5 HOH 230 730 730 HOH HOH A . E 5 HOH 231 731 731 HOH HOH A . E 5 HOH 232 732 732 HOH HOH A . E 5 HOH 233 733 733 HOH HOH A . E 5 HOH 234 734 734 HOH HOH A . E 5 HOH 235 735 735 HOH HOH A . E 5 HOH 236 736 736 HOH HOH A . E 5 HOH 237 737 737 HOH HOH A . E 5 HOH 238 738 738 HOH HOH A . E 5 HOH 239 739 739 HOH HOH A . E 5 HOH 240 740 740 HOH HOH A . E 5 HOH 241 741 741 HOH HOH A . E 5 HOH 242 742 742 HOH HOH A . E 5 HOH 243 743 743 HOH HOH A . E 5 HOH 244 744 744 HOH HOH A . E 5 HOH 245 745 745 HOH HOH A . E 5 HOH 246 746 746 HOH HOH A . E 5 HOH 247 747 747 HOH HOH A . E 5 HOH 248 748 748 HOH HOH A . E 5 HOH 249 749 749 HOH HOH A . #