HEADER TRANSFERASE/TRANSFERASE INHIBITOR 15-SEP-13 4MQ1 TITLE THE CRYSTAL STRUCTURE OF DYRK1A WITH A BOUND PYRIDO[2,3-D]PYRIMIDINE TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION-REGULATED KINASE COMPND 3 1A; COMPND 4 CHAIN: A, B, C, D; COMPND 5 FRAGMENT: UNP RESIDUES 127-485; COMPND 6 SYNONYM: DUAL SPECIFICITY YAK1-RELATED KINASE, HP86, PROTEIN KINASE COMPND 7 MINIBRAIN HOMOLOG, MNBH, HMNB; COMPND 8 EC: 2.7.12.1; COMPND 9 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: DYRK1A, DYRK, MNB, MNBH; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)-R3-PRARE2; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4 KEYWDS DYRK1A, DYRK1B, KINASE, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR C.M.LUKACS,C.A.JANSON,C.GARVIE,L.LIANG REVDAT 4 06-DEC-23 4MQ1 1 REMARK REVDAT 3 20-SEP-23 4MQ1 1 REMARK SEQADV LINK REVDAT 2 18-DEC-13 4MQ1 1 JRNL REVDAT 1 11-DEC-13 4MQ1 0 JRNL AUTH K.ANDERSON,Y.CHEN,Z.CHEN,R.DOMINIQUE,K.GLENN,Y.HE,C.JANSON, JRNL AUTH 2 K.C.LUK,C.LUKACS,A.POLONSKAIA,Q.QIAO,A.RAILKAR,P.ROSSMAN, JRNL AUTH 3 H.SUN,Q.XIANG,M.VILENCHIK,P.WOVKULICH,X.ZHANG JRNL TITL PYRIDO[2,3-D]PYRIMIDINES: DISCOVERY AND PRELIMINARY SAR OF A JRNL TITL 2 NOVEL SERIES OF DYRK1B AND DYRK1A INHIBITORS. JRNL REF BIOORG.MED.CHEM.LETT. V. 23 6610 2013 JRNL REFN ISSN 0960-894X JRNL PMID 24239188 JRNL DOI 10.1016/J.BMCL.2013.10.055 REMARK 2 REMARK 2 RESOLUTION. 2.35 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.35 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.83 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 85514 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.246 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4498 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.35 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.41 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6286 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3040 REMARK 3 BIN FREE R VALUE SET COUNT : 348 REMARK 3 BIN FREE R VALUE : 0.3550 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 10921 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 281 REMARK 3 SOLVENT ATOMS : 470 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 53.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.94 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.12000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.22000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.265 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.152 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.371 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.947 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.928 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 11486 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 10892 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 15517 ; 1.511 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 24994 ; 0.892 ; 3.007 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1347 ; 6.169 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 527 ;36.344 ;23.947 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1955 ;14.025 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 65 ;19.083 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1649 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 12751 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 2712 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5409 ; 3.449 ; 5.045 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 5408 ; 3.449 ; 5.045 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6746 ; 5.239 ; 7.549 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 6747 ; 5.238 ; 7.550 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 6077 ; 3.556 ; 5.308 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 6066 ; 3.533 ; 5.302 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 8753 ; 5.498 ; 7.848 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 13484 ; 7.567 ;40.507 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 13326 ; 7.550 ;40.470 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4MQ1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082222. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 90023 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.350 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 3.800 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 8.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2VX3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.98 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 15% PEG 300, 0.1M LISO4, 0.1M TRIS, PH REMARK 280 8.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 131.92150 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.46950 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 131.92150 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 32.46950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 793 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 125 REMARK 465 MET A 126 REMARK 465 SER A 127 REMARK 465 SER A 128 REMARK 465 HIS A 129 REMARK 465 LYS A 130 REMARK 465 LYS A 131 REMARK 465 GLU A 132 REMARK 465 ARG A 133 REMARK 465 LYS A 134 REMARK 465 LYS A 481 REMARK 465 THR A 482 REMARK 465 ALA A 483 REMARK 465 ASP A 484 REMARK 465 GLU A 485 REMARK 465 SER B 125 REMARK 465 MET B 126 REMARK 465 SER B 127 REMARK 465 SER B 128 REMARK 465 HIS B 129 REMARK 465 LYS B 130 REMARK 465 LYS B 131 REMARK 465 GLU B 132 REMARK 465 ARG B 133 REMARK 465 LYS B 134 REMARK 465 LYS B 409 REMARK 465 ASP B 410 REMARK 465 GLY B 411 REMARK 465 LYS B 412 REMARK 465 ARG B 413 REMARK 465 LYS B 481 REMARK 465 THR B 482 REMARK 465 ALA B 483 REMARK 465 ASP B 484 REMARK 465 GLU B 485 REMARK 465 SER C 125 REMARK 465 MET C 126 REMARK 465 SER C 127 REMARK 465 SER C 128 REMARK 465 HIS C 129 REMARK 465 LYS C 130 REMARK 465 LYS C 131 REMARK 465 GLU C 132 REMARK 465 ARG C 133 REMARK 465 LYS C 134 REMARK 465 ASP C 214 REMARK 465 THR C 215 REMARK 465 GLU C 216 REMARK 465 GLY C 432 REMARK 465 GLY C 433 REMARK 465 PRO C 434 REMARK 465 GLY C 435 REMARK 465 GLY C 436 REMARK 465 ARG C 437 REMARK 465 ARG C 438 REMARK 465 ALA C 439 REMARK 465 GLY C 440 REMARK 465 GLU C 441 REMARK 465 SER C 442 REMARK 465 GLY C 443 REMARK 465 HIS C 444 REMARK 465 LYS C 480 REMARK 465 LYS C 481 REMARK 465 THR C 482 REMARK 465 ALA C 483 REMARK 465 ASP C 484 REMARK 465 GLU C 485 REMARK 465 SER D 125 REMARK 465 MET D 126 REMARK 465 SER D 127 REMARK 465 SER D 128 REMARK 465 HIS D 129 REMARK 465 LYS D 130 REMARK 465 LYS D 131 REMARK 465 GLU D 132 REMARK 465 ARG D 133 REMARK 465 LYS D 134 REMARK 465 LEU D 398 REMARK 465 PRO D 399 REMARK 465 ASP D 400 REMARK 465 GLY D 401 REMARK 465 THR D 402 REMARK 465 ASP D 410 REMARK 465 GLY D 411 REMARK 465 GLY D 443 REMARK 465 LYS D 480 REMARK 465 LYS D 481 REMARK 465 THR D 482 REMARK 465 ALA D 483 REMARK 465 ASP D 484 REMARK 465 GLU D 485 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 157 CG OD1 OD2 REMARK 470 ARG A 317 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 407 CG CD CE NZ REMARK 470 LYS A 409 CG CD CE NZ REMARK 470 LYS A 412 CG CD CE NZ REMARK 470 GLU B 216 CG CD OE1 OE2 REMARK 470 LYS B 299 CG CD CE NZ REMARK 470 ARG B 317 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 407 CG CD CE NZ REMARK 470 LYS B 480 CG CD CE NZ REMARK 470 LYS C 154 CG CD CE NZ REMARK 470 GLU C 160 CG CD OE1 OE2 REMARK 470 MET C 217 CG SD CE REMARK 470 ARG C 255 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 260 CG OD1 ND2 REMARK 470 LYS C 264 CG CD CE NZ REMARK 470 LYS C 299 CG CD CE NZ REMARK 470 ARG C 317 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 320 CG CD OE1 NE2 REMARK 470 ARG C 392 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 397 CG CD CE NZ REMARK 470 LYS C 407 CG CD CE NZ REMARK 470 LYS C 409 CG CD CE NZ REMARK 470 LYS C 412 CG CD CE NZ REMARK 470 THR C 445 OG1 CG2 REMARK 470 LYS C 451 CG CD CE NZ REMARK 470 ARG C 458 CG CD NE CZ NH1 NH2 REMARK 470 LYS C 465 CG CD CE NZ REMARK 470 TYR C 471 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LYS D 154 CG CD CE NZ REMARK 470 GLU D 181 CG CD OE1 OE2 REMARK 470 LYS D 212 CG CD CE NZ REMARK 470 ASP D 214 CG OD1 OD2 REMARK 470 GLU D 216 CG CD OE1 OE2 REMARK 470 ARG D 255 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 317 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 392 CG CD NE CZ NH1 NH2 REMARK 470 GLU D 396 CG CD OE1 OE2 REMARK 470 LYS D 397 CG CD CE NZ REMARK 470 LYS D 407 CG CD CE NZ REMARK 470 LYS D 409 CG CD CE NZ REMARK 470 LYS D 412 CG CD CE NZ REMARK 470 SER D 442 OG REMARK 470 LYS D 451 CG CD CE NZ REMARK 470 LYS D 465 CG CD CE NZ REMARK 470 TYR D 471 CG CD1 CD2 CE1 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 247 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 325 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 458 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 458 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 137 54.02 39.25 REMARK 500 ARG A 158 -51.49 -151.08 REMARK 500 LEU A 241 -163.80 -121.86 REMARK 500 SER A 242 -158.73 -111.34 REMARK 500 CYS A 286 -3.18 84.08 REMARK 500 ASP A 287 42.40 -148.12 REMARK 500 LYS A 289 166.84 179.45 REMARK 500 ASP A 307 86.56 64.33 REMARK 500 GLN A 316 108.54 -161.87 REMARK 500 ARG A 317 124.10 0.23 REMARK 500 GLN A 323 147.34 74.90 REMARK 500 SER A 362 45.35 -103.38 REMARK 500 ASP A 400 4.58 -68.69 REMARK 500 ARG B 158 -55.23 -130.72 REMARK 500 GLN B 182 62.35 60.69 REMARK 500 SER B 242 -150.93 -106.60 REMARK 500 CYS B 286 -0.92 74.32 REMARK 500 ASP B 287 40.45 -147.07 REMARK 500 ASP B 307 78.17 65.50 REMARK 500 GLN B 323 141.93 74.84 REMARK 500 ASP B 339 -159.62 -150.27 REMARK 500 ASP C 157 38.92 38.47 REMARK 500 ARG C 158 -51.87 -130.67 REMARK 500 LEU C 241 -166.03 -113.89 REMARK 500 ASP C 287 42.37 -156.94 REMARK 500 ASP C 307 89.02 57.95 REMARK 500 ARG C 317 116.92 -27.43 REMARK 500 GLN C 323 151.93 68.46 REMARK 500 SER C 362 56.93 -98.85 REMARK 500 ASP C 400 -37.56 -36.92 REMARK 500 GLU C 414 -40.24 -130.97 REMARK 500 ASP D 157 44.26 36.55 REMARK 500 ARG D 158 -44.96 -146.69 REMARK 500 LEU D 241 -167.69 -113.89 REMARK 500 SER D 242 -148.19 -105.21 REMARK 500 ASN D 253 42.78 36.26 REMARK 500 LEU D 281 -64.89 -100.93 REMARK 500 CYS D 286 -2.89 83.34 REMARK 500 ASP D 287 42.25 -155.99 REMARK 500 ASP D 307 87.23 66.40 REMARK 500 ARG D 317 125.34 -3.21 REMARK 500 GLN D 323 153.02 70.67 REMARK 500 PRO D 381 150.43 -49.82 REMARK 500 LYS D 406 155.83 -46.24 REMARK 500 ARG D 438 43.98 -105.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR C 319 GLN C 320 143.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE B 503 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2C3 A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2C3 B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE B 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2C3 C 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE C 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2C3 D 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE D 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 D 504 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2VX3 RELATED DB: PDB REMARK 900 RELATED ID: 4MQ2 RELATED DB: PDB DBREF 4MQ1 A 127 485 UNP Q13627 DYR1A_HUMAN 127 485 DBREF 4MQ1 B 127 485 UNP Q13627 DYR1A_HUMAN 127 485 DBREF 4MQ1 C 127 485 UNP Q13627 DYR1A_HUMAN 127 485 DBREF 4MQ1 D 127 485 UNP Q13627 DYR1A_HUMAN 127 485 SEQADV 4MQ1 SER A 125 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 MET A 126 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 SER B 125 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 MET B 126 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 SER C 125 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 MET C 126 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 SER D 125 UNP Q13627 EXPRESSION TAG SEQADV 4MQ1 MET D 126 UNP Q13627 EXPRESSION TAG SEQRES 1 A 361 SER MET SER SER HIS LYS LYS GLU ARG LYS VAL TYR ASN SEQRES 2 A 361 ASP GLY TYR ASP ASP ASP ASN TYR ASP TYR ILE VAL LYS SEQRES 3 A 361 ASN GLY GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER SEQRES 4 A 361 LEU ILE GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA SEQRES 5 A 361 TYR ASP ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE SEQRES 6 A 361 ILE LYS ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE SEQRES 7 A 361 GLU VAL ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR SEQRES 8 A 361 GLU MET LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE SEQRES 9 A 361 MET PHE ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SEQRES 10 A 361 SER TYR ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE SEQRES 11 A 361 ARG GLY VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN SEQRES 12 A 361 GLN MET CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU SEQRES 13 A 361 LEU SER ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE SEQRES 14 A 361 LEU LEU CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL SEQRES 15 A 361 ASP PHE GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR SEQRES 16 A 361 GLN PTR ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL SEQRES 17 A 361 LEU LEU GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SEQRES 18 A 361 SER LEU GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU SEQRES 19 A 361 PRO LEU PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN SEQRES 20 A 361 LYS ILE VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE SEQRES 21 A 361 LEU ASP GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS SEQRES 22 A 361 LEU PRO ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP SEQRES 23 A 361 GLY LYS ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU SEQRES 24 A 361 HIS ASN ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY SEQRES 25 A 361 ARG ARG ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR SEQRES 26 A 361 LEU LYS PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR SEQRES 27 A 361 ASP PRO LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN SEQRES 28 A 361 HIS SER PHE PHE LYS LYS THR ALA ASP GLU SEQRES 1 B 361 SER MET SER SER HIS LYS LYS GLU ARG LYS VAL TYR ASN SEQRES 2 B 361 ASP GLY TYR ASP ASP ASP ASN TYR ASP TYR ILE VAL LYS SEQRES 3 B 361 ASN GLY GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER SEQRES 4 B 361 LEU ILE GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA SEQRES 5 B 361 TYR ASP ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE SEQRES 6 B 361 ILE LYS ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE SEQRES 7 B 361 GLU VAL ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR SEQRES 8 B 361 GLU MET LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE SEQRES 9 B 361 MET PHE ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SEQRES 10 B 361 SER TYR ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE SEQRES 11 B 361 ARG GLY VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN SEQRES 12 B 361 GLN MET CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU SEQRES 13 B 361 LEU SER ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE SEQRES 14 B 361 LEU LEU CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL SEQRES 15 B 361 ASP PHE GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR SEQRES 16 B 361 GLN PTR ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL SEQRES 17 B 361 LEU LEU GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SEQRES 18 B 361 SER LEU GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU SEQRES 19 B 361 PRO LEU PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN SEQRES 20 B 361 LYS ILE VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE SEQRES 21 B 361 LEU ASP GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS SEQRES 22 B 361 LEU PRO ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP SEQRES 23 B 361 GLY LYS ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU SEQRES 24 B 361 HIS ASN ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY SEQRES 25 B 361 ARG ARG ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR SEQRES 26 B 361 LEU LYS PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR SEQRES 27 B 361 ASP PRO LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN SEQRES 28 B 361 HIS SER PHE PHE LYS LYS THR ALA ASP GLU SEQRES 1 C 361 SER MET SER SER HIS LYS LYS GLU ARG LYS VAL TYR ASN SEQRES 2 C 361 ASP GLY TYR ASP ASP ASP ASN TYR ASP TYR ILE VAL LYS SEQRES 3 C 361 ASN GLY GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER SEQRES 4 C 361 LEU ILE GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA SEQRES 5 C 361 TYR ASP ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE SEQRES 6 C 361 ILE LYS ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE SEQRES 7 C 361 GLU VAL ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR SEQRES 8 C 361 GLU MET LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE SEQRES 9 C 361 MET PHE ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SEQRES 10 C 361 SER TYR ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE SEQRES 11 C 361 ARG GLY VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN SEQRES 12 C 361 GLN MET CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU SEQRES 13 C 361 LEU SER ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE SEQRES 14 C 361 LEU LEU CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL SEQRES 15 C 361 ASP PHE GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR SEQRES 16 C 361 GLN PTR ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL SEQRES 17 C 361 LEU LEU GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SEQRES 18 C 361 SER LEU GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU SEQRES 19 C 361 PRO LEU PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN SEQRES 20 C 361 LYS ILE VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE SEQRES 21 C 361 LEU ASP GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS SEQRES 22 C 361 LEU PRO ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP SEQRES 23 C 361 GLY LYS ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU SEQRES 24 C 361 HIS ASN ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY SEQRES 25 C 361 ARG ARG ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR SEQRES 26 C 361 LEU LYS PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR SEQRES 27 C 361 ASP PRO LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN SEQRES 28 C 361 HIS SER PHE PHE LYS LYS THR ALA ASP GLU SEQRES 1 D 361 SER MET SER SER HIS LYS LYS GLU ARG LYS VAL TYR ASN SEQRES 2 D 361 ASP GLY TYR ASP ASP ASP ASN TYR ASP TYR ILE VAL LYS SEQRES 3 D 361 ASN GLY GLU LYS TRP MET ASP ARG TYR GLU ILE ASP SER SEQRES 4 D 361 LEU ILE GLY LYS GLY SER PHE GLY GLN VAL VAL LYS ALA SEQRES 5 D 361 TYR ASP ARG VAL GLU GLN GLU TRP VAL ALA ILE LYS ILE SEQRES 6 D 361 ILE LYS ASN LYS LYS ALA PHE LEU ASN GLN ALA GLN ILE SEQRES 7 D 361 GLU VAL ARG LEU LEU GLU LEU MET ASN LYS HIS ASP THR SEQRES 8 D 361 GLU MET LYS TYR TYR ILE VAL HIS LEU LYS ARG HIS PHE SEQRES 9 D 361 MET PHE ARG ASN HIS LEU CYS LEU VAL PHE GLU MET LEU SEQRES 10 D 361 SER TYR ASN LEU TYR ASP LEU LEU ARG ASN THR ASN PHE SEQRES 11 D 361 ARG GLY VAL SER LEU ASN LEU THR ARG LYS PHE ALA GLN SEQRES 12 D 361 GLN MET CYS THR ALA LEU LEU PHE LEU ALA THR PRO GLU SEQRES 13 D 361 LEU SER ILE ILE HIS CYS ASP LEU LYS PRO GLU ASN ILE SEQRES 14 D 361 LEU LEU CYS ASN PRO LYS ARG SER ALA ILE LYS ILE VAL SEQRES 15 D 361 ASP PHE GLY SER SER CYS GLN LEU GLY GLN ARG ILE TYR SEQRES 16 D 361 GLN PTR ILE GLN SER ARG PHE TYR ARG SER PRO GLU VAL SEQRES 17 D 361 LEU LEU GLY MET PRO TYR ASP LEU ALA ILE ASP MET TRP SEQRES 18 D 361 SER LEU GLY CYS ILE LEU VAL GLU MET HIS THR GLY GLU SEQRES 19 D 361 PRO LEU PHE SER GLY ALA ASN GLU VAL ASP GLN MET ASN SEQRES 20 D 361 LYS ILE VAL GLU VAL LEU GLY ILE PRO PRO ALA HIS ILE SEQRES 21 D 361 LEU ASP GLN ALA PRO LYS ALA ARG LYS PHE PHE GLU LYS SEQRES 22 D 361 LEU PRO ASP GLY THR TRP ASN LEU LYS LYS THR LYS ASP SEQRES 23 D 361 GLY LYS ARG GLU TYR LYS PRO PRO GLY THR ARG LYS LEU SEQRES 24 D 361 HIS ASN ILE LEU GLY VAL GLU THR GLY GLY PRO GLY GLY SEQRES 25 D 361 ARG ARG ALA GLY GLU SER GLY HIS THR VAL ALA ASP TYR SEQRES 26 D 361 LEU LYS PHE LYS ASP LEU ILE LEU ARG MET LEU ASP TYR SEQRES 27 D 361 ASP PRO LYS THR ARG ILE GLN PRO TYR TYR ALA LEU GLN SEQRES 28 D 361 HIS SER PHE PHE LYS LYS THR ALA ASP GLU MODRES 4MQ1 PTR A 321 TYR O-PHOSPHOTYROSINE MODRES 4MQ1 PTR B 321 TYR O-PHOSPHOTYROSINE MODRES 4MQ1 PTR C 321 TYR O-PHOSPHOTYROSINE MODRES 4MQ1 PTR D 321 TYR O-PHOSPHOTYROSINE HET PTR A 321 32 HET PTR B 321 16 HET PTR C 321 16 HET PTR D 321 16 HET 2C3 A 501 37 HET 1PE A 502 16 HET 1PE A 503 16 HET SO4 A 504 5 HET SO4 A 505 5 HET 2C3 B 501 37 HET 1PE B 502 16 HET 1PE B 503 13 HET SO4 B 504 5 HET SO4 B 505 5 HET 2C3 C 501 37 HET 1PE C 502 16 HET SO4 C 503 5 HET SO4 C 504 5 HET 2C3 D 501 37 HET 1PE D 502 16 HET SO4 D 503 5 HET SO4 D 504 5 HETNAM PTR O-PHOSPHOTYROSINE HETNAM 2C3 N-(5-{[(1R)-3-AMINO-1-(3-CHLOROPHENYL) HETNAM 2 2C3 PROPYL]CARBAMOYL}-2-CHLOROPHENYL)-2-METHOXY-7-OXO-7,8- HETNAM 3 2C3 DIHYDROPYRIDO[2,3-D]PYRIMIDINE-6-CARBOXAMIDE HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETSYN PTR PHOSPHONOTYROSINE HETSYN 1PE PEG400 FORMUL 1 PTR 4(C9 H12 N O6 P) FORMUL 5 2C3 4(C25 H22 CL2 N6 O4) FORMUL 6 1PE 6(C10 H22 O6) FORMUL 8 SO4 8(O4 S 2-) FORMUL 23 HOH *470(H2 O) HELIX 1 1 TYR A 136 TYR A 140 5 5 HELIX 2 2 LYS A 193 LYS A 212 1 20 HELIX 3 3 THR A 215 ILE A 221 5 7 HELIX 4 4 ASN A 244 THR A 252 1 9 HELIX 5 5 SER A 258 ALA A 277 1 20 HELIX 6 6 LYS A 289 GLU A 291 5 3 HELIX 7 7 SER A 324 ARG A 328 5 5 HELIX 8 8 SER A 329 LEU A 334 1 6 HELIX 9 9 LEU A 340 GLY A 357 1 18 HELIX 10 10 ASN A 365 GLY A 378 1 14 HELIX 11 11 PRO A 381 ASP A 386 1 6 HELIX 12 12 LYS A 390 PHE A 394 1 5 HELIX 13 13 LYS A 422 LEU A 427 1 6 HELIX 14 14 GLY A 433 ARG A 437 5 5 HELIX 15 15 THR A 445 LEU A 460 1 16 HELIX 16 16 GLN A 469 GLN A 475 1 7 HELIX 17 17 HIS A 476 LYS A 480 5 5 HELIX 18 18 TYR B 136 TYR B 140 5 5 HELIX 19 19 LYS B 193 LYS B 212 1 20 HELIX 20 20 THR B 215 ILE B 221 5 7 HELIX 21 21 ASN B 244 THR B 252 1 9 HELIX 22 22 SER B 258 ALA B 277 1 20 HELIX 23 23 LYS B 289 GLU B 291 5 3 HELIX 24 24 SER B 324 ARG B 328 5 5 HELIX 25 25 SER B 329 LEU B 334 1 6 HELIX 26 26 LEU B 340 GLY B 357 1 18 HELIX 27 27 ASN B 365 GLY B 378 1 14 HELIX 28 28 PRO B 381 ASP B 386 1 6 HELIX 29 29 LYS B 390 PHE B 394 1 5 HELIX 30 30 LYS B 422 LEU B 427 1 6 HELIX 31 31 GLY B 433 ARG B 437 5 5 HELIX 32 32 THR B 445 LEU B 460 1 16 HELIX 33 33 GLN B 469 LEU B 474 1 6 HELIX 34 34 GLN B 475 LYS B 480 5 6 HELIX 35 35 TYR C 136 TYR C 140 5 5 HELIX 36 36 LYS C 193 LYS C 212 1 20 HELIX 37 37 MET C 217 ILE C 221 5 5 HELIX 38 38 ASN C 244 THR C 252 1 9 HELIX 39 39 SER C 258 ALA C 277 1 20 HELIX 40 40 LYS C 289 GLU C 291 5 3 HELIX 41 41 SER C 324 ARG C 328 5 5 HELIX 42 42 SER C 329 LEU C 334 1 6 HELIX 43 43 LEU C 340 GLY C 357 1 18 HELIX 44 44 ASN C 365 GLY C 378 1 14 HELIX 45 45 PRO C 381 ALA C 388 1 8 HELIX 46 46 LYS C 390 LYS C 393 5 4 HELIX 47 47 LYS C 422 GLY C 428 1 7 HELIX 48 48 VAL C 446 LEU C 460 1 15 HELIX 49 49 ASP C 463 ARG C 467 5 5 HELIX 50 50 GLN C 469 GLN C 475 1 7 HELIX 51 51 TYR D 136 TYR D 140 5 5 HELIX 52 52 LYS D 193 LYS D 212 1 20 HELIX 53 53 THR D 215 ILE D 221 5 7 HELIX 54 54 ASN D 244 THR D 252 1 9 HELIX 55 55 SER D 258 THR D 278 1 21 HELIX 56 56 LYS D 289 GLU D 291 5 3 HELIX 57 57 SER D 324 ARG D 328 5 5 HELIX 58 58 SER D 329 LEU D 334 1 6 HELIX 59 59 LEU D 340 GLY D 357 1 18 HELIX 60 60 ASN D 365 GLY D 378 1 14 HELIX 61 61 PRO D 381 ASP D 386 1 6 HELIX 62 62 LYS D 390 LYS D 393 5 4 HELIX 63 63 LYS D 422 GLY D 428 1 7 HELIX 64 64 GLY D 433 ARG D 437 5 5 HELIX 65 65 THR D 445 LEU D 460 1 16 HELIX 66 66 GLN D 469 GLN D 475 1 7 SHEET 1 A 6 LYS A 154 TRP A 155 0 SHEET 2 A 6 TYR A 159 GLY A 168 -1 O TYR A 159 N TRP A 155 SHEET 3 A 6 GLY A 171 ASP A 178 -1 O LYS A 175 N SER A 163 SHEET 4 A 6 GLU A 183 ILE A 190 -1 O VAL A 185 N ALA A 176 SHEET 5 A 6 HIS A 233 GLU A 239 -1 O PHE A 238 N ALA A 186 SHEET 6 A 6 LEU A 224 PHE A 230 -1 N ARG A 226 O VAL A 237 SHEET 1 B 2 ILE A 283 ILE A 284 0 SHEET 2 B 2 CYS A 312 GLN A 313 -1 O CYS A 312 N ILE A 284 SHEET 1 C 2 ILE A 293 LEU A 295 0 SHEET 2 C 2 ILE A 303 ILE A 305 -1 O LYS A 304 N LEU A 294 SHEET 1 D 2 PHE A 395 LYS A 397 0 SHEET 2 D 2 TRP A 403 LEU A 405 -1 O ASN A 404 N GLU A 396 SHEET 1 E 6 LYS B 154 TRP B 155 0 SHEET 2 E 6 TYR B 159 GLY B 168 -1 O TYR B 159 N TRP B 155 SHEET 3 E 6 GLY B 171 ASP B 178 -1 O VAL B 173 N GLY B 166 SHEET 4 E 6 GLU B 183 ILE B 190 -1 O GLU B 183 N ASP B 178 SHEET 5 E 6 HIS B 233 GLU B 239 -1 O PHE B 238 N ALA B 186 SHEET 6 E 6 LEU B 224 PHE B 230 -1 N ARG B 226 O VAL B 237 SHEET 1 F 2 ILE B 283 ILE B 284 0 SHEET 2 F 2 CYS B 312 GLN B 313 -1 O CYS B 312 N ILE B 284 SHEET 1 G 2 ILE B 293 LEU B 295 0 SHEET 2 G 2 ILE B 303 ILE B 305 -1 O LYS B 304 N LEU B 294 SHEET 1 H 2 PHE B 395 LYS B 397 0 SHEET 2 H 2 TRP B 403 LEU B 405 -1 O ASN B 404 N GLU B 396 SHEET 1 I 6 LYS C 154 TRP C 155 0 SHEET 2 I 6 TYR C 159 GLY C 168 -1 O TYR C 159 N TRP C 155 SHEET 3 I 6 GLY C 171 ASP C 178 -1 O VAL C 173 N GLY C 166 SHEET 4 I 6 GLU C 183 ILE C 190 -1 O VAL C 185 N ALA C 176 SHEET 5 I 6 HIS C 233 GLU C 239 -1 O PHE C 238 N ALA C 186 SHEET 6 I 6 LEU C 224 PHE C 230 -1 N PHE C 228 O CYS C 235 SHEET 1 J 2 ILE C 283 ILE C 284 0 SHEET 2 J 2 CYS C 312 GLN C 313 -1 O CYS C 312 N ILE C 284 SHEET 1 K 2 ILE C 293 LEU C 295 0 SHEET 2 K 2 ILE C 303 ILE C 305 -1 O LYS C 304 N LEU C 294 SHEET 1 L 2 PHE C 395 LYS C 397 0 SHEET 2 L 2 TRP C 403 LEU C 405 -1 O ASN C 404 N GLU C 396 SHEET 1 M 6 LYS D 154 TRP D 155 0 SHEET 2 M 6 TYR D 159 GLY D 168 -1 O TYR D 159 N TRP D 155 SHEET 3 M 6 GLY D 171 ASP D 178 -1 O LYS D 175 N SER D 163 SHEET 4 M 6 GLU D 183 ILE D 190 -1 O VAL D 185 N ALA D 176 SHEET 5 M 6 HIS D 233 GLU D 239 -1 O PHE D 238 N ALA D 186 SHEET 6 M 6 LEU D 224 PHE D 230 -1 N PHE D 228 O CYS D 235 SHEET 1 N 2 ILE D 283 ILE D 284 0 SHEET 2 N 2 CYS D 312 GLN D 313 -1 O CYS D 312 N ILE D 284 SHEET 1 O 2 ILE D 293 LEU D 295 0 SHEET 2 O 2 ILE D 303 ILE D 305 -1 O LYS D 304 N LEU D 294 SHEET 1 P 2 PHE D 395 GLU D 396 0 SHEET 2 P 2 ASN D 404 LEU D 405 -1 O ASN D 404 N GLU D 396 LINK C GLN A 320 N APTR A 321 1555 1555 1.31 LINK C GLN A 320 N BPTR A 321 1555 1555 1.33 LINK C APTR A 321 N ILE A 322 1555 1555 1.32 LINK C BPTR A 321 N ILE A 322 1555 1555 1.34 LINK C GLN B 320 N PTR B 321 1555 1555 1.33 LINK C PTR B 321 N ILE B 322 1555 1555 1.34 LINK C GLN C 320 N PTR C 321 1555 1555 1.33 LINK C PTR C 321 N ILE C 322 1555 1555 1.32 LINK C GLN D 320 N PTR D 321 1555 1555 1.32 LINK C PTR D 321 N ILE D 322 1555 1555 1.34 CISPEP 1 GLN C 320 PTR C 321 0 14.27 SITE 1 AC1 19 ILE A 165 GLY A 166 LYS A 167 GLY A 168 SITE 2 AC1 19 PHE A 170 GLY A 171 VAL A 173 LYS A 188 SITE 3 AC1 19 PHE A 238 GLU A 239 MET A 240 LEU A 241 SITE 4 AC1 19 SER A 242 ASN A 292 LEU A 294 VAL A 306 SITE 5 AC1 19 ASP A 307 SO4 A 505 HOH A 676 SITE 1 AC2 3 ASP A 162 LYS A 175 TRP A 184 SITE 1 AC3 3 GLN A 201 GLN C 201 LEU C 234 SITE 1 AC4 5 THR A 466 ARG A 467 ILE A 468 GLN A 469 SITE 2 AC4 5 TYR A 472 SITE 1 AC5 7 GLY A 168 SER A 169 LYS A 289 GLY A 411 SITE 2 AC5 7 2C3 A 501 HOH A 758 HOH A 782 SITE 1 AC6 20 ILE B 165 LYS B 167 GLY B 168 GLY B 171 SITE 2 AC6 20 GLN B 172 LYS B 188 PHE B 238 GLU B 239 SITE 3 AC6 20 MET B 240 LEU B 241 SER B 242 TYR B 243 SITE 4 AC6 20 ASN B 292 LEU B 294 VAL B 306 ASP B 307 SITE 5 AC6 20 1PE B 502 HOH B 637 HOH B 700 GLN D 182 SITE 1 AC7 4 ASP B 162 LYS B 175 TRP B 184 2C3 B 501 SITE 1 AC8 3 GLN B 201 MET B 229 GLN D 201 SITE 1 AC9 3 LYS B 264 ARG B 300 SER B 301 SITE 1 BC1 4 ARG B 467 ILE B 468 GLN B 469 TYR B 472 SITE 1 BC2 18 ILE C 165 LYS C 167 GLY C 168 GLY C 171 SITE 2 BC2 18 VAL C 173 LYS C 188 PHE C 238 GLU C 239 SITE 3 BC2 18 MET C 240 LEU C 241 SER C 242 TYR C 243 SITE 4 BC2 18 ASN C 292 LEU C 294 VAL C 306 ASP C 307 SITE 5 BC2 18 1PE C 502 SO4 C 503 SITE 1 BC3 5 ASP C 162 LYS C 175 TRP C 184 2C3 C 501 SITE 2 BC3 5 HOH C 615 SITE 1 BC4 4 GLY C 168 SER C 169 2C3 C 501 HOH C 619 SITE 1 BC5 4 PTR C 321 ASN C 365 GLU C 366 LYS C 393 SITE 1 BC6 17 ILE D 165 LYS D 167 GLY D 168 PHE D 170 SITE 2 BC6 17 GLY D 171 VAL D 173 LYS D 188 PHE D 238 SITE 3 BC6 17 GLU D 239 MET D 240 LEU D 241 SER D 242 SITE 4 BC6 17 ASN D 292 LEU D 294 ASP D 307 1PE D 502 SITE 5 BC6 17 SO4 D 503 SITE 1 BC7 6 ASP D 162 LYS D 175 TRP D 184 2C3 D 501 SITE 2 BC7 6 HOH D 650 HOH D 651 SITE 1 BC8 4 GLY D 168 SER D 169 LYS D 289 2C3 D 501 SITE 1 BC9 3 PTR D 321 GLU D 366 LYS D 393 CRYST1 263.843 64.939 140.461 90.00 115.16 90.00 C 1 2 1 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.003790 0.000000 0.001780 0.00000 SCALE2 0.000000 0.015399 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007866 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.608151 -0.792911 -0.038002 20.78508 1 MTRIX2 2 -0.792760 0.604168 0.080699 15.69872 1 MTRIX3 2 -0.041028 0.079204 -0.996014 -105.08250 1 MTRIX1 3 0.842292 0.471557 -0.261112 11.51254 1 MTRIX2 3 0.481677 -0.875900 -0.028050 -1.17060 1 MTRIX3 3 -0.241935 -0.102146 -0.964901 -45.80280 1 MTRIX1 4 0.889670 -0.380269 -0.252751 50.87412 1 MTRIX2 4 -0.394582 -0.918838 -0.006496 0.38144 1 MTRIX3 4 -0.229767 0.105511 -0.967510 -81.02502 1