data_4MQ3 # _entry.id 4MQ3 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4MQ3 RCSB RCSB082224 WWPDB D_1000082224 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4MQ3 _pdbx_database_status.recvd_initial_deposition_date 2013-09-15 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Galilee, M.' 1 'Alian, A.' 2 # _citation.id primary _citation.title ;Identification of phe187 as a crucial dimerization determinant facilitates crystallization of a monomeric retroviral integrase core domain. ; _citation.journal_abbrev Structure _citation.journal_volume 22 _citation.page_first 1512 _citation.page_last 1519 _citation.year 2014 _citation.journal_id_ASTM STRUE6 _citation.country UK _citation.journal_id_ISSN 0969-2126 _citation.journal_id_CSD 2005 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 25199694 _citation.pdbx_database_id_DOI 10.1016/j.str.2014.08.001 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Galilee, M.' 1 primary 'Alian, A.' 2 # _cell.entry_id 4MQ3 _cell.length_a 28.254 _cell.length_b 66.643 _cell.length_c 32.619 _cell.angle_alpha 90.00 _cell.angle_beta 103.43 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MQ3 _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Integrase 14667.780 1 ? F1030K 'Catalytic Core Domain' ? 2 water nat water 18.015 186 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name IN # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMG VKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNKK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMG VKHKFGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNKK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 ILE n 1 7 TRP n 1 8 GLN n 1 9 MET n 1 10 ASP n 1 11 CYS n 1 12 THR n 1 13 HIS n 1 14 PHE n 1 15 ASP n 1 16 GLY n 1 17 LYS n 1 18 ILE n 1 19 ILE n 1 20 LEU n 1 21 VAL n 1 22 GLY n 1 23 ILE n 1 24 HIS n 1 25 VAL n 1 26 GLU n 1 27 SER n 1 28 GLY n 1 29 TYR n 1 30 ILE n 1 31 TRP n 1 32 ALA n 1 33 GLN n 1 34 ILE n 1 35 ILE n 1 36 SER n 1 37 GLN n 1 38 GLU n 1 39 THR n 1 40 ALA n 1 41 ASP n 1 42 CYS n 1 43 THR n 1 44 VAL n 1 45 LYS n 1 46 ALA n 1 47 VAL n 1 48 LEU n 1 49 GLN n 1 50 LEU n 1 51 LEU n 1 52 SER n 1 53 ALA n 1 54 HIS n 1 55 ASN n 1 56 VAL n 1 57 THR n 1 58 GLU n 1 59 LEU n 1 60 GLN n 1 61 THR n 1 62 ASP n 1 63 ASN n 1 64 GLY n 1 65 PRO n 1 66 ASN n 1 67 PHE n 1 68 LYS n 1 69 ASN n 1 70 GLN n 1 71 LYS n 1 72 MET n 1 73 GLU n 1 74 GLY n 1 75 VAL n 1 76 LEU n 1 77 ASN n 1 78 TYR n 1 79 MET n 1 80 GLY n 1 81 VAL n 1 82 LYS n 1 83 HIS n 1 84 LYS n 1 85 PHE n 1 86 GLY n 1 87 ILE n 1 88 PRO n 1 89 GLY n 1 90 ASN n 1 91 PRO n 1 92 GLN n 1 93 SER n 1 94 GLN n 1 95 ALA n 1 96 LEU n 1 97 VAL n 1 98 GLU n 1 99 ASN n 1 100 VAL n 1 101 ASN n 1 102 HIS n 1 103 THR n 1 104 LEU n 1 105 LYS n 1 106 VAL n 1 107 TRP n 1 108 ILE n 1 109 GLN n 1 110 LYS n 1 111 PHE n 1 112 LEU n 1 113 PRO n 1 114 GLU n 1 115 THR n 1 116 THR n 1 117 SER n 1 118 LEU n 1 119 ASP n 1 120 ASN n 1 121 ALA n 1 122 LEU n 1 123 SER n 1 124 LEU n 1 125 ALA n 1 126 VAL n 1 127 HIS n 1 128 SER n 1 129 LEU n 1 130 ASN n 1 131 LYS n 1 132 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name FIV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene pol _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'isolate Petaluma' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Feline immunodeficiency virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11674 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'ArcticExpress (DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code POL_FIVPE _struct_ref.pdbx_db_accession P16088 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GIWQMDCTHFDGKIILVGIHVESGYIWAQIISQETADCTVKAVLQLLSAHNVTELQTDNGPNFKNQKMEGVLNYMGVKHK FGIPGNPQSQALVENVNHTLKVWIQKFLPETTSLDNALSLAVHSLNFK ; _struct_ref.pdbx_align_begin 904 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MQ3 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 132 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P16088 _struct_ref_seq.db_align_beg 904 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1031 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 61 _struct_ref_seq.pdbx_auth_seq_align_end 188 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4MQ3 GLY A 1 ? UNP P16088 ? ? 'EXPRESSION TAG' 57 1 1 4MQ3 SER A 2 ? UNP P16088 ? ? 'EXPRESSION TAG' 58 2 1 4MQ3 HIS A 3 ? UNP P16088 ? ? 'EXPRESSION TAG' 59 3 1 4MQ3 MET A 4 ? UNP P16088 ? ? 'EXPRESSION TAG' 60 4 1 4MQ3 LYS A 131 ? UNP P16088 PHE 1030 'ENGINEERED MUTATION' 187 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4MQ3 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # loop_ _exptl_crystal.id _exptl_crystal.density_meas _exptl_crystal.density_Matthews _exptl_crystal.density_percent_sol _exptl_crystal.description _exptl_crystal.F_000 _exptl_crystal.preparation 1 ? 2.07 40.64 ? ? ? 2 ? ? ? ? ? ? # loop_ _exptl_crystal_grow.crystal_id _exptl_crystal_grow.method _exptl_crystal_grow.temp _exptl_crystal_grow.temp_details _exptl_crystal_grow.pH _exptl_crystal_grow.pdbx_pH_range _exptl_crystal_grow.pdbx_details 1 'VAPOR DIFFUSION' 293 ? 8.5 ? '0.2M Trimethylamine N-oxide, 0.1M Tris pH 8.5, 20% PEG MME 2000, VAPOR DIFFUSION, temperature 293K' 2 'VAPOR DIFFUSION' 293 ? 5.5 ? '0.2M Ammonium acetate, 0.1M Bis-Tris pH 5.5, 25% PEG 3350, VAPOR DIFFUSION, temperature 293K' # _diffrn.id 1 _diffrn.ambient_temp 103 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2013-07-30 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.918409 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.918409 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4MQ3 _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F -3 _reflns.d_resolution_low 33.32 _reflns.d_resolution_high 1.08 _reflns.number_obs 47812 _reflns.number_all 48083 _reflns.percent_possible_obs 95.6 _reflns.pdbx_Rmerge_I_obs 0.03 _reflns.pdbx_Rsym_value 0.03 _reflns.pdbx_netI_over_sigmaI 15.94 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.41 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.08 _reflns_shell.d_res_low 1.135 _reflns_shell.percent_possible_all 90.3 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.59 _reflns_shell.pdbx_redundancy ? _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4MQ3 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 45678 _refine.ls_number_reflns_all 47812 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 33.32 _refine.ls_d_res_high 1.08 _refine.ls_percent_reflns_obs 95.48 _refine.ls_R_factor_obs 0.14173 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.13990 _refine.ls_R_factor_R_free 0.17650 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 2405 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.979 _refine.correlation_coeff_Fo_to_Fc_free 0.966 _refine.B_iso_mean 17.061 _refine.aniso_B[1][1] 0.17 _refine.aniso_B[2][2] 0.07 _refine.aniso_B[3][3] -0.21 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.05 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'PDB ENTRY 3f9k' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.029 _refine.pdbx_overall_ESU_R_Free 0.032 _refine.overall_SU_ML 0.021 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 0.922 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4MQ3 _refine_analyze.Luzzati_coordinate_error_obs 0.1304 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1009 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 186 _refine_hist.number_atoms_total 1195 _refine_hist.d_res_high 1.08 _refine_hist.d_res_low 33.32 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.020 0.020 ? 1030 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.942 1.931 ? 1397 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.609 5.000 ? 128 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.130 26.667 ? 45 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 12.373 15.000 ? 184 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_chiral_restr 0.121 0.200 ? 161 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.013 0.021 ? 758 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr 8.439 3.000 ? 1030 'X-RAY DIFFRACTION' ? r_sphericity_free 43.451 5.000 ? 40 'X-RAY DIFFRACTION' ? r_sphericity_bonded 17.379 5.000 ? 1155 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.079 _refine_ls_shell.d_res_low 1.107 _refine_ls_shell.number_reflns_R_work 3006 _refine_ls_shell.R_factor_R_work 0.226 _refine_ls_shell.percent_reflns_obs 87.28 _refine_ls_shell.R_factor_R_free 0.273 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 158 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _pdbx_refine.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine.entry_id 4MQ3 _pdbx_refine.R_factor_all_no_cutoff ? _pdbx_refine.R_factor_obs_no_cutoff ? _pdbx_refine.free_R_factor_no_cutoff ? _pdbx_refine.free_R_error_no_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_no_cutoff ? _pdbx_refine.free_R_val_test_set_ct_no_cutoff ? _pdbx_refine.R_factor_all_4sig_cutoff ? _pdbx_refine.R_factor_obs_4sig_cutoff ? _pdbx_refine.free_R_factor_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff ? _pdbx_refine.free_R_val_test_set_ct_4sig_cutoff ? _pdbx_refine.number_reflns_obs_4sig_cutoff ? # _struct.entry_id 4MQ3 _struct.title 'The 1.1 Angstrom Structure of Catalytic Core Domain of FIV Integrase' _struct.pdbx_descriptor Integrase _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MQ3 _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'alpha beta, Ribonuclease-H like motif, Nucleotidyltransferase, VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 39 ? HIS A 54 ? THR A 95 HIS A 110 1 ? 16 HELX_P HELX_P2 2 ASN A 69 ? GLY A 80 ? ASN A 125 GLY A 136 1 ? 12 HELX_P HELX_P3 3 GLN A 94 ? LEU A 112 ? GLN A 150 LEU A 168 1 ? 19 HELX_P HELX_P4 4 PRO A 113 ? THR A 115 ? PRO A 169 THR A 171 5 ? 3 HELX_P HELX_P5 5 SER A 117 ? LYS A 131 ? SER A 173 LYS A 187 1 ? 15 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 30 ? ILE A 35 ? ILE A 86 ILE A 91 A 2 LYS A 17 ? HIS A 24 ? LYS A 73 HIS A 80 A 3 ILE A 6 ? PHE A 14 ? ILE A 62 PHE A 70 A 4 GLU A 58 ? ASP A 62 ? GLU A 114 ASP A 118 A 5 LYS A 82 ? GLY A 86 ? LYS A 138 GLY A 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O GLN A 33 ? O GLN A 89 N LEU A 20 ? N LEU A 76 A 2 3 O ILE A 19 ? O ILE A 75 N THR A 12 ? N THR A 68 A 3 4 N TRP A 7 ? N TRP A 63 O GLN A 60 ? O GLN A 116 A 4 5 N LEU A 59 ? N LEU A 115 O LYS A 82 ? O LYS A 138 # _database_PDB_matrix.entry_id 4MQ3 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4MQ3 _atom_sites.fract_transf_matrix[1][1] 0.035393 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.008451 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015005 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.031519 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 57 ? ? ? A . n A 1 2 SER 2 58 ? ? ? A . n A 1 3 HIS 3 59 ? ? ? A . n A 1 4 MET 4 60 60 MET MET A . n A 1 5 GLY 5 61 61 GLY GLY A . n A 1 6 ILE 6 62 62 ILE ILE A . n A 1 7 TRP 7 63 63 TRP TRP A . n A 1 8 GLN 8 64 64 GLN GLN A . n A 1 9 MET 9 65 65 MET MET A . n A 1 10 ASP 10 66 66 ASP ASP A . n A 1 11 CYS 11 67 67 CYS CYS A . n A 1 12 THR 12 68 68 THR THR A . n A 1 13 HIS 13 69 69 HIS HIS A . n A 1 14 PHE 14 70 70 PHE PHE A . n A 1 15 ASP 15 71 71 ASP ASP A . n A 1 16 GLY 16 72 72 GLY GLY A . n A 1 17 LYS 17 73 73 LYS LYS A . n A 1 18 ILE 18 74 74 ILE ILE A . n A 1 19 ILE 19 75 75 ILE ILE A . n A 1 20 LEU 20 76 76 LEU LEU A . n A 1 21 VAL 21 77 77 VAL VAL A . n A 1 22 GLY 22 78 78 GLY GLY A . n A 1 23 ILE 23 79 79 ILE ILE A . n A 1 24 HIS 24 80 80 HIS HIS A . n A 1 25 VAL 25 81 81 VAL VAL A . n A 1 26 GLU 26 82 82 GLU GLU A . n A 1 27 SER 27 83 83 SER SER A . n A 1 28 GLY 28 84 84 GLY GLY A . n A 1 29 TYR 29 85 85 TYR TYR A . n A 1 30 ILE 30 86 86 ILE ILE A . n A 1 31 TRP 31 87 87 TRP TRP A . n A 1 32 ALA 32 88 88 ALA ALA A . n A 1 33 GLN 33 89 89 GLN GLN A . n A 1 34 ILE 34 90 90 ILE ILE A . n A 1 35 ILE 35 91 91 ILE ILE A . n A 1 36 SER 36 92 92 SER SER A . n A 1 37 GLN 37 93 93 GLN GLN A . n A 1 38 GLU 38 94 94 GLU GLU A . n A 1 39 THR 39 95 95 THR THR A . n A 1 40 ALA 40 96 96 ALA ALA A . n A 1 41 ASP 41 97 97 ASP ASP A . n A 1 42 CYS 42 98 98 CYS CYS A . n A 1 43 THR 43 99 99 THR THR A . n A 1 44 VAL 44 100 100 VAL VAL A . n A 1 45 LYS 45 101 101 LYS LYS A . n A 1 46 ALA 46 102 102 ALA ALA A . n A 1 47 VAL 47 103 103 VAL VAL A . n A 1 48 LEU 48 104 104 LEU LEU A . n A 1 49 GLN 49 105 105 GLN GLN A . n A 1 50 LEU 50 106 106 LEU LEU A . n A 1 51 LEU 51 107 107 LEU LEU A . n A 1 52 SER 52 108 108 SER SER A . n A 1 53 ALA 53 109 109 ALA ALA A . n A 1 54 HIS 54 110 110 HIS HIS A . n A 1 55 ASN 55 111 111 ASN ASN A . n A 1 56 VAL 56 112 112 VAL VAL A . n A 1 57 THR 57 113 113 THR THR A . n A 1 58 GLU 58 114 114 GLU GLU A . n A 1 59 LEU 59 115 115 LEU LEU A . n A 1 60 GLN 60 116 116 GLN GLN A . n A 1 61 THR 61 117 117 THR THR A . n A 1 62 ASP 62 118 118 ASP ASP A . n A 1 63 ASN 63 119 119 ASN ASN A . n A 1 64 GLY 64 120 120 GLY GLY A . n A 1 65 PRO 65 121 121 PRO PRO A . n A 1 66 ASN 66 122 122 ASN ASN A . n A 1 67 PHE 67 123 123 PHE PHE A . n A 1 68 LYS 68 124 124 LYS LYS A . n A 1 69 ASN 69 125 125 ASN ASN A . n A 1 70 GLN 70 126 126 GLN GLN A . n A 1 71 LYS 71 127 127 LYS LYS A . n A 1 72 MET 72 128 128 MET MET A . n A 1 73 GLU 73 129 129 GLU GLU A . n A 1 74 GLY 74 130 130 GLY GLY A . n A 1 75 VAL 75 131 131 VAL VAL A . n A 1 76 LEU 76 132 132 LEU LEU A . n A 1 77 ASN 77 133 133 ASN ASN A . n A 1 78 TYR 78 134 134 TYR TYR A . n A 1 79 MET 79 135 135 MET MET A . n A 1 80 GLY 80 136 136 GLY GLY A . n A 1 81 VAL 81 137 137 VAL VAL A . n A 1 82 LYS 82 138 138 LYS LYS A . n A 1 83 HIS 83 139 139 HIS HIS A . n A 1 84 LYS 84 140 140 LYS LYS A . n A 1 85 PHE 85 141 141 PHE PHE A . n A 1 86 GLY 86 142 142 GLY GLY A . n A 1 87 ILE 87 143 143 ILE ILE A . n A 1 88 PRO 88 144 144 PRO PRO A . n A 1 89 GLY 89 145 145 GLY GLY A . n A 1 90 ASN 90 146 146 ASN ASN A . n A 1 91 PRO 91 147 147 PRO PRO A . n A 1 92 GLN 92 148 148 GLN GLN A . n A 1 93 SER 93 149 149 SER SER A . n A 1 94 GLN 94 150 150 GLN GLN A . n A 1 95 ALA 95 151 151 ALA ALA A . n A 1 96 LEU 96 152 152 LEU LEU A . n A 1 97 VAL 97 153 153 VAL VAL A . n A 1 98 GLU 98 154 154 GLU GLU A . n A 1 99 ASN 99 155 155 ASN ASN A . n A 1 100 VAL 100 156 156 VAL VAL A . n A 1 101 ASN 101 157 157 ASN ASN A . n A 1 102 HIS 102 158 158 HIS HIS A . n A 1 103 THR 103 159 159 THR THR A . n A 1 104 LEU 104 160 160 LEU LEU A . n A 1 105 LYS 105 161 161 LYS LYS A . n A 1 106 VAL 106 162 162 VAL VAL A . n A 1 107 TRP 107 163 163 TRP TRP A . n A 1 108 ILE 108 164 164 ILE ILE A . n A 1 109 GLN 109 165 165 GLN GLN A . n A 1 110 LYS 110 166 166 LYS LYS A . n A 1 111 PHE 111 167 167 PHE PHE A . n A 1 112 LEU 112 168 168 LEU LEU A . n A 1 113 PRO 113 169 169 PRO PRO A . n A 1 114 GLU 114 170 170 GLU GLU A . n A 1 115 THR 115 171 171 THR THR A . n A 1 116 THR 116 172 172 THR THR A . n A 1 117 SER 117 173 173 SER SER A . n A 1 118 LEU 118 174 174 LEU LEU A . n A 1 119 ASP 119 175 175 ASP ASP A . n A 1 120 ASN 120 176 176 ASN ASN A . n A 1 121 ALA 121 177 177 ALA ALA A . n A 1 122 LEU 122 178 178 LEU LEU A . n A 1 123 SER 123 179 179 SER SER A . n A 1 124 LEU 124 180 180 LEU LEU A . n A 1 125 ALA 125 181 181 ALA ALA A . n A 1 126 VAL 126 182 182 VAL VAL A . n A 1 127 HIS 127 183 183 HIS HIS A . n A 1 128 SER 128 184 184 SER SER A . n A 1 129 LEU 129 185 185 LEU LEU A . n A 1 130 ASN 130 186 186 ASN ASN A . n A 1 131 LYS 131 187 187 LYS LYS A . n A 1 132 LYS 132 188 188 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-09-17 2 'Structure model' 1 1 2014-11-19 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal MxCuBE 'data collection' . ? 1 BALBES phasing . ? 2 REFMAC refinement 5.6.0117 ? 3 XDS 'data reduction' . ? 4 XDS 'data scaling' . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NE2 A GLN 148 ? ? O A HOH 325 ? ? 1.48 2 1 CB A MET 60 ? ? O A HOH 320 ? ? 1.83 3 1 CB A ASN 122 ? ? O A HOH 344 ? ? 2.11 4 1 O A HOH 272 ? ? O A HOH 304 ? ? 2.11 5 1 O A HOH 379 ? ? O A HOH 380 ? ? 2.18 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 C A LYS 188 ? ? 1_555 O A HOH 229 ? ? 1_455 1.46 2 1 O A HOH 250 ? ? 1_555 O A HOH 370 ? ? 1_655 1.88 3 1 O A HOH 262 ? ? 1_555 O A HOH 360 ? ? 1_655 2.07 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 57 ? A GLY 1 2 1 Y 1 A SER 58 ? A SER 2 3 1 Y 1 A HIS 59 ? A HIS 3 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 10 HOH HOH A . B 2 HOH 11 211 11 HOH HOH A . B 2 HOH 12 212 12 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 14 HOH HOH A . B 2 HOH 15 215 15 HOH HOH A . B 2 HOH 16 216 16 HOH HOH A . B 2 HOH 17 217 17 HOH HOH A . B 2 HOH 18 218 18 HOH HOH A . B 2 HOH 19 219 19 HOH HOH A . B 2 HOH 20 220 20 HOH HOH A . B 2 HOH 21 221 21 HOH HOH A . B 2 HOH 22 222 22 HOH HOH A . B 2 HOH 23 223 23 HOH HOH A . B 2 HOH 24 224 24 HOH HOH A . B 2 HOH 25 225 25 HOH HOH A . B 2 HOH 26 226 26 HOH HOH A . B 2 HOH 27 227 27 HOH HOH A . B 2 HOH 28 228 28 HOH HOH A . B 2 HOH 29 229 29 HOH HOH A . B 2 HOH 30 230 30 HOH HOH A . B 2 HOH 31 231 31 HOH HOH A . B 2 HOH 32 232 32 HOH HOH A . B 2 HOH 33 233 33 HOH HOH A . B 2 HOH 34 234 34 HOH HOH A . B 2 HOH 35 235 35 HOH HOH A . B 2 HOH 36 236 36 HOH HOH A . B 2 HOH 37 237 37 HOH HOH A . B 2 HOH 38 238 38 HOH HOH A . B 2 HOH 39 239 39 HOH HOH A . B 2 HOH 40 240 40 HOH HOH A . B 2 HOH 41 241 41 HOH HOH A . B 2 HOH 42 242 42 HOH HOH A . B 2 HOH 43 243 43 HOH HOH A . B 2 HOH 44 244 44 HOH HOH A . B 2 HOH 45 245 45 HOH HOH A . B 2 HOH 46 246 46 HOH HOH A . B 2 HOH 47 247 47 HOH HOH A . B 2 HOH 48 248 48 HOH HOH A . B 2 HOH 49 249 49 HOH HOH A . B 2 HOH 50 250 50 HOH HOH A . B 2 HOH 51 251 51 HOH HOH A . B 2 HOH 52 252 52 HOH HOH A . B 2 HOH 53 253 53 HOH HOH A . B 2 HOH 54 254 54 HOH HOH A . B 2 HOH 55 255 55 HOH HOH A . B 2 HOH 56 256 56 HOH HOH A . B 2 HOH 57 257 57 HOH HOH A . B 2 HOH 58 258 58 HOH HOH A . B 2 HOH 59 259 59 HOH HOH A . B 2 HOH 60 260 60 HOH HOH A . B 2 HOH 61 261 61 HOH HOH A . B 2 HOH 62 262 62 HOH HOH A . B 2 HOH 63 263 63 HOH HOH A . B 2 HOH 64 264 64 HOH HOH A . B 2 HOH 65 265 65 HOH HOH A . B 2 HOH 66 266 66 HOH HOH A . B 2 HOH 67 267 67 HOH HOH A . B 2 HOH 68 268 68 HOH HOH A . B 2 HOH 69 269 69 HOH HOH A . B 2 HOH 70 270 70 HOH HOH A . B 2 HOH 71 271 71 HOH HOH A . B 2 HOH 72 272 72 HOH HOH A . B 2 HOH 73 273 73 HOH HOH A . B 2 HOH 74 274 74 HOH HOH A . B 2 HOH 75 275 75 HOH HOH A . B 2 HOH 76 276 76 HOH HOH A . B 2 HOH 77 277 77 HOH HOH A . B 2 HOH 78 278 78 HOH HOH A . B 2 HOH 79 279 79 HOH HOH A . B 2 HOH 80 280 80 HOH HOH A . B 2 HOH 81 281 81 HOH HOH A . B 2 HOH 82 282 82 HOH HOH A . B 2 HOH 83 283 83 HOH HOH A . B 2 HOH 84 284 84 HOH HOH A . B 2 HOH 85 285 85 HOH HOH A . B 2 HOH 86 286 86 HOH HOH A . B 2 HOH 87 287 87 HOH HOH A . B 2 HOH 88 288 88 HOH HOH A . B 2 HOH 89 289 89 HOH HOH A . B 2 HOH 90 290 90 HOH HOH A . B 2 HOH 91 291 91 HOH HOH A . B 2 HOH 92 292 92 HOH HOH A . B 2 HOH 93 293 93 HOH HOH A . B 2 HOH 94 294 94 HOH HOH A . B 2 HOH 95 295 95 HOH HOH A . B 2 HOH 96 296 96 HOH HOH A . B 2 HOH 97 297 97 HOH HOH A . B 2 HOH 98 298 98 HOH HOH A . B 2 HOH 99 299 99 HOH HOH A . B 2 HOH 100 300 100 HOH HOH A . B 2 HOH 101 301 101 HOH HOH A . B 2 HOH 102 302 102 HOH HOH A . B 2 HOH 103 303 103 HOH HOH A . B 2 HOH 104 304 104 HOH HOH A . B 2 HOH 105 305 105 HOH HOH A . B 2 HOH 106 306 106 HOH HOH A . B 2 HOH 107 307 107 HOH HOH A . B 2 HOH 108 308 108 HOH HOH A . B 2 HOH 109 309 109 HOH HOH A . B 2 HOH 110 310 110 HOH HOH A . B 2 HOH 111 311 111 HOH HOH A . B 2 HOH 112 312 112 HOH HOH A . B 2 HOH 113 313 113 HOH HOH A . B 2 HOH 114 314 114 HOH HOH A . B 2 HOH 115 315 115 HOH HOH A . B 2 HOH 116 316 116 HOH HOH A . B 2 HOH 117 317 117 HOH HOH A . B 2 HOH 118 318 118 HOH HOH A . B 2 HOH 119 319 119 HOH HOH A . B 2 HOH 120 320 120 HOH HOH A . B 2 HOH 121 321 121 HOH HOH A . B 2 HOH 122 322 122 HOH HOH A . B 2 HOH 123 323 123 HOH HOH A . B 2 HOH 124 324 124 HOH HOH A . B 2 HOH 125 325 125 HOH HOH A . B 2 HOH 126 326 126 HOH HOH A . B 2 HOH 127 327 127 HOH HOH A . B 2 HOH 128 328 128 HOH HOH A . B 2 HOH 129 329 129 HOH HOH A . B 2 HOH 130 330 130 HOH HOH A . B 2 HOH 131 331 131 HOH HOH A . B 2 HOH 132 332 132 HOH HOH A . B 2 HOH 133 333 133 HOH HOH A . B 2 HOH 134 334 134 HOH HOH A . B 2 HOH 135 335 135 HOH HOH A . B 2 HOH 136 336 136 HOH HOH A . B 2 HOH 137 337 137 HOH HOH A . B 2 HOH 138 338 138 HOH HOH A . B 2 HOH 139 339 139 HOH HOH A . B 2 HOH 140 340 140 HOH HOH A . B 2 HOH 141 341 141 HOH HOH A . B 2 HOH 142 342 142 HOH HOH A . B 2 HOH 143 343 143 HOH HOH A . B 2 HOH 144 344 144 HOH HOH A . B 2 HOH 145 345 145 HOH HOH A . B 2 HOH 146 346 147 HOH HOH A . B 2 HOH 147 347 148 HOH HOH A . B 2 HOH 148 348 149 HOH HOH A . B 2 HOH 149 349 151 HOH HOH A . B 2 HOH 150 350 152 HOH HOH A . B 2 HOH 151 351 153 HOH HOH A . B 2 HOH 152 352 154 HOH HOH A . B 2 HOH 153 353 155 HOH HOH A . B 2 HOH 154 354 156 HOH HOH A . B 2 HOH 155 355 157 HOH HOH A . B 2 HOH 156 356 158 HOH HOH A . B 2 HOH 157 357 159 HOH HOH A . B 2 HOH 158 358 160 HOH HOH A . B 2 HOH 159 359 161 HOH HOH A . B 2 HOH 160 360 162 HOH HOH A . B 2 HOH 161 361 163 HOH HOH A . B 2 HOH 162 362 164 HOH HOH A . B 2 HOH 163 363 166 HOH HOH A . B 2 HOH 164 364 167 HOH HOH A . B 2 HOH 165 365 168 HOH HOH A . B 2 HOH 166 366 169 HOH HOH A . B 2 HOH 167 367 171 HOH HOH A . B 2 HOH 168 368 172 HOH HOH A . B 2 HOH 169 369 173 HOH HOH A . B 2 HOH 170 370 174 HOH HOH A . B 2 HOH 171 371 175 HOH HOH A . B 2 HOH 172 372 176 HOH HOH A . B 2 HOH 173 373 177 HOH HOH A . B 2 HOH 174 374 178 HOH HOH A . B 2 HOH 175 375 179 HOH HOH A . B 2 HOH 176 376 180 HOH HOH A . B 2 HOH 177 377 181 HOH HOH A . B 2 HOH 178 378 182 HOH HOH A . B 2 HOH 179 379 183 HOH HOH A . B 2 HOH 180 380 184 HOH HOH A . B 2 HOH 181 381 185 HOH HOH A . B 2 HOH 182 382 186 HOH HOH A . B 2 HOH 183 383 187 HOH HOH A . B 2 HOH 184 384 188 HOH HOH A . B 2 HOH 185 385 189 HOH HOH A . B 2 HOH 186 386 1 HOH HOH A . #