HEADER SIGNALING PROTEIN 18-SEP-13 4MSL TITLE CRYSTAL STRUCTURE OF THE VPS10P DOMAIN OF HUMAN SORTILIN/NTS3 IN TITLE 2 COMPLEX WITH AF40431 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SORTILIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: VPS10P DOMAIN (UNP RESIDUES 78-756); COMPND 5 SYNONYM: 100 KDA NT RECEPTOR, GLYCOPROTEIN 95, GP95, NEUROTENSIN COMPND 6 RECEPTOR 3, NT3, NTR3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SORT1; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL: HUMAN EMBRYONIC KIDNEY 293F CELLS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCEP-PU KEYWDS PRONGF, ALZHEIMER'S DISEASE, BETA-PROPELLER, ASP-BOX REPEAT, VPS10P KEYWDS 2 DOMAIN, 10CC DOMAIN, RECEPTOR SORTING, PEPTIDE BINDING, PROTEIN KEYWDS 3 BINDING, MEMBRANE, SIGNALING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.L.ANDERSEN,D.STRANDBYGAARD,S.THIRUP REVDAT 4 27-NOV-24 4MSL 1 HETSYN REVDAT 3 29-JUL-20 4MSL 1 COMPND REMARK SEQADV HETNAM REVDAT 3 2 1 LINK SITE ATOM REVDAT 2 24-SEP-14 4MSL 1 JRNL REVDAT 1 12-FEB-14 4MSL 0 JRNL AUTH J.L.ANDERSEN,T.J.SCHRDER,S.CHRISTENSEN,D.STRANDBYGARD, JRNL AUTH 2 L.T.PALLESEN,M.M.GARCIA-ALAI,S.LINDBERG,M.LANGGARD, JRNL AUTH 3 J.C.ESKILDSEN,L.DAVID,L.TAGMOSE,K.B.SIMONSEN,P.J.MALTAS, JRNL AUTH 4 L.C.RNN,I.E.DE JONG,I.J.MALIK,J.EGEBJERG,J.J.KARLSSON, JRNL AUTH 5 S.UPPALANCHI,D.R.SAKUMUDI,P.ERADI,S.P.WATSON,S.THIRUP JRNL TITL IDENTIFICATION OF THE FIRST SMALL-MOLECULE LIGAND OF THE JRNL TITL 2 NEURONAL RECEPTOR SORTILIN AND STRUCTURE DETERMINATION OF JRNL TITL 3 THE RECEPTOR-LIGAND COMPLEX. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 70 451 2014 JRNL REFN ISSN 0907-4449 JRNL PMID 24531479 JRNL DOI 10.1107/S1399004713030149 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.2_1309) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.95 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 30842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.206 REMARK 3 R VALUE (WORKING SET) : 0.205 REMARK 3 FREE R VALUE : 0.227 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1543 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.9609 - 6.0010 1.00 2734 144 0.1923 0.2217 REMARK 3 2 6.0010 - 4.7646 1.00 2701 143 0.1733 0.1844 REMARK 3 3 4.7646 - 4.1628 1.00 2668 141 0.1589 0.1728 REMARK 3 4 4.1628 - 3.7824 1.00 2666 140 0.1984 0.2341 REMARK 3 5 3.7824 - 3.5114 1.00 2646 139 0.2147 0.2661 REMARK 3 6 3.5114 - 3.3044 1.00 2679 142 0.2283 0.2408 REMARK 3 7 3.3044 - 3.1389 1.00 2641 138 0.2601 0.2472 REMARK 3 8 3.1389 - 3.0023 1.00 2649 139 0.2671 0.2901 REMARK 3 9 3.0023 - 2.8868 1.00 2626 138 0.2730 0.3056 REMARK 3 10 2.8868 - 2.7872 1.00 2653 140 0.2887 0.3116 REMARK 3 11 2.7872 - 2.7000 1.00 2636 139 0.3099 0.3434 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.340 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 84.40 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 5395 REMARK 3 ANGLE : 1.260 7291 REMARK 3 CHIRALITY : 0.089 802 REMARK 3 PLANARITY : 0.006 929 REMARK 3 DIHEDRAL : 14.664 1967 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 53:238) REMARK 3 ORIGIN FOR THE GROUP (A): -17.6457 37.1772 38.3912 REMARK 3 T TENSOR REMARK 3 T11: 0.7747 T22: 0.9453 REMARK 3 T33: 0.5973 T12: -0.2999 REMARK 3 T13: -0.1013 T23: -0.0656 REMARK 3 L TENSOR REMARK 3 L11: 3.7044 L22: 7.4440 REMARK 3 L33: 3.9172 L12: -3.3711 REMARK 3 L13: 0.3059 L23: -1.2931 REMARK 3 S TENSOR REMARK 3 S11: -0.0078 S12: -1.0694 S13: 0.1679 REMARK 3 S21: 0.7667 S22: 0.3401 S23: -0.3490 REMARK 3 S31: -0.5220 S32: 0.2646 S33: -0.2868 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 239:534) REMARK 3 ORIGIN FOR THE GROUP (A): -26.3320 24.5167 15.7043 REMARK 3 T TENSOR REMARK 3 T11: 0.3155 T22: 0.5646 REMARK 3 T33: 0.4337 T12: -0.0753 REMARK 3 T13: 0.0512 T23: -0.0154 REMARK 3 L TENSOR REMARK 3 L11: 3.3435 L22: 4.2535 REMARK 3 L33: 4.5667 L12: -0.0046 REMARK 3 L13: -0.9034 L23: 0.0808 REMARK 3 S TENSOR REMARK 3 S11: 0.2604 S12: 0.0700 S13: -0.2043 REMARK 3 S21: 0.3136 S22: -0.3873 S23: 0.2895 REMARK 3 S31: -0.1241 S32: -0.6287 S33: 0.1335 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 535:652) REMARK 3 ORIGIN FOR THE GROUP (A): -10.3784 16.9098 16.9985 REMARK 3 T TENSOR REMARK 3 T11: 0.3625 T22: 0.6087 REMARK 3 T33: 0.7506 T12: -0.0860 REMARK 3 T13: -0.0793 T23: 0.1184 REMARK 3 L TENSOR REMARK 3 L11: 3.4941 L22: 3.0636 REMARK 3 L33: 7.3434 L12: -0.3457 REMARK 3 L13: -1.3560 L23: 0.1421 REMARK 3 S TENSOR REMARK 3 S11: 0.0431 S12: -0.3355 S13: -0.2263 REMARK 3 S21: 0.4278 S22: -0.2758 S23: -0.4771 REMARK 3 S31: 0.5180 S32: 0.6938 S33: 0.1522 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 653:715) REMARK 3 ORIGIN FOR THE GROUP (A): -24.8097 40.0660 -10.9787 REMARK 3 T TENSOR REMARK 3 T11: 0.8557 T22: 1.4456 REMARK 3 T33: 1.0346 T12: 0.4236 REMARK 3 T13: 0.2246 T23: 0.2412 REMARK 3 L TENSOR REMARK 3 L11: 5.5092 L22: 4.2225 REMARK 3 L33: 1.7389 L12: -5.0914 REMARK 3 L13: 3.4183 L23: -3.0124 REMARK 3 S TENSOR REMARK 3 S11: 0.9641 S12: 1.6933 S13: 0.4478 REMARK 3 S21: -0.8105 S22: -1.2311 S23: -0.6285 REMARK 3 S31: -0.2026 S32: 0.3388 S33: 0.3068 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MSL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082313. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 14-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9000 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M-F REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30847 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 47.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.03900 REMARK 200 R SYM (I) : 0.03900 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 19.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.47400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 66.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES-TRIS, 0.4 M SODIUM REMARK 280 MALONATE, 26 % (W/V) PEG 3350, 8 % (V/V) GLYCEROL, PH 7.3, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 292K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 80.43800 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.58250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 80.43800 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 39.58250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 45 REMARK 465 ALA A 46 REMARK 465 PRO A 47 REMARK 465 GLY A 48 REMARK 465 GLU A 49 REMARK 465 ASP A 50 REMARK 465 GLU A 51 REMARK 465 GLU A 52 REMARK 465 PRO A 100 REMARK 465 LEU A 101 REMARK 465 VAL A 102 REMARK 465 ILE A 103 REMARK 465 MET A 104 REMARK 465 THR A 105 REMARK 465 PHE A 106 REMARK 465 PHE A 559 REMARK 465 LEU A 560 REMARK 465 LYS A 716 REMARK 465 GLN A 717 REMARK 465 ASN A 718 REMARK 465 SER A 719 REMARK 465 LYS A 720 REMARK 465 SER A 721 REMARK 465 ASN A 722 REMARK 465 SER A 723 REMARK 465 GLY A 724 REMARK 465 SER A 725 REMARK 465 ALA A 726 REMARK 465 MET A 727 REMARK 465 ILE A 728 REMARK 465 GLU A 729 REMARK 465 GLY A 730 REMARK 465 ARG A 731 REMARK 465 GLY A 732 REMARK 465 VAL A 733 REMARK 465 GLY A 734 REMARK 465 HIS A 735 REMARK 465 HIS A 736 REMARK 465 HIS A 737 REMARK 465 HIS A 738 REMARK 465 HIS A 739 REMARK 465 HIS A 740 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 73 -125.34 45.90 REMARK 500 TYR A 117 34.18 70.81 REMARK 500 GLU A 144 -134.61 56.33 REMARK 500 PHE A 170 34.70 70.95 REMARK 500 ALA A 240 -70.63 -126.61 REMARK 500 ASP A 389 3.58 -68.70 REMARK 500 GLN A 400 38.80 81.14 REMARK 500 THR A 592 -63.12 -125.79 REMARK 500 GLU A 650 -161.49 69.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3F6K RELATED DB: PDB DBREF 4MSL A 45 723 UNP Q99523 SORT_HUMAN 78 756 SEQADV 4MSL MET A 617 UNP Q99523 VAL 650 VARIANT SEQADV 4MSL GLY A 724 UNP Q99523 EXPRESSION TAG SEQADV 4MSL SER A 725 UNP Q99523 EXPRESSION TAG SEQADV 4MSL ALA A 726 UNP Q99523 EXPRESSION TAG SEQADV 4MSL MET A 727 UNP Q99523 EXPRESSION TAG SEQADV 4MSL ILE A 728 UNP Q99523 EXPRESSION TAG SEQADV 4MSL GLU A 729 UNP Q99523 EXPRESSION TAG SEQADV 4MSL GLY A 730 UNP Q99523 EXPRESSION TAG SEQADV 4MSL ARG A 731 UNP Q99523 EXPRESSION TAG SEQADV 4MSL GLY A 732 UNP Q99523 EXPRESSION TAG SEQADV 4MSL VAL A 733 UNP Q99523 EXPRESSION TAG SEQADV 4MSL GLY A 734 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 735 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 736 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 737 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 738 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 739 UNP Q99523 EXPRESSION TAG SEQADV 4MSL HIS A 740 UNP Q99523 EXPRESSION TAG SEQRES 1 A 696 SER ALA PRO GLY GLU ASP GLU GLU CYS GLY ARG VAL ARG SEQRES 2 A 696 ASP PHE VAL ALA LYS LEU ALA ASN ASN THR HIS GLN HIS SEQRES 3 A 696 VAL PHE ASP ASP LEU ARG GLY SER VAL SER LEU SER TRP SEQRES 4 A 696 VAL GLY ASP SER THR GLY VAL ILE LEU VAL LEU THR THR SEQRES 5 A 696 PHE HIS VAL PRO LEU VAL ILE MET THR PHE GLY GLN SER SEQRES 6 A 696 LYS LEU TYR ARG SER GLU ASP TYR GLY LYS ASN PHE LYS SEQRES 7 A 696 ASP ILE THR ASP LEU ILE ASN ASN THR PHE ILE ARG THR SEQRES 8 A 696 GLU PHE GLY MET ALA ILE GLY PRO GLU ASN SER GLY LYS SEQRES 9 A 696 VAL VAL LEU THR ALA GLU VAL SER GLY GLY SER ARG GLY SEQRES 10 A 696 GLY ARG ILE PHE ARG SER SER ASP PHE ALA LYS ASN PHE SEQRES 11 A 696 VAL GLN THR ASP LEU PRO PHE HIS PRO LEU THR GLN MET SEQRES 12 A 696 MET TYR SER PRO GLN ASN SER ASP TYR LEU LEU ALA LEU SEQRES 13 A 696 SER THR GLU ASN GLY LEU TRP VAL SER LYS ASN PHE GLY SEQRES 14 A 696 GLY LYS TRP GLU GLU ILE HIS LYS ALA VAL CYS LEU ALA SEQRES 15 A 696 LYS TRP GLY SER ASP ASN THR ILE PHE PHE THR THR TYR SEQRES 16 A 696 ALA ASN GLY SER CYS LYS ALA ASP LEU GLY ALA LEU GLU SEQRES 17 A 696 LEU TRP ARG THR SER ASP LEU GLY LYS SER PHE LYS THR SEQRES 18 A 696 ILE GLY VAL LYS ILE TYR SER PHE GLY LEU GLY GLY ARG SEQRES 19 A 696 PHE LEU PHE ALA SER VAL MET ALA ASP LYS ASP THR THR SEQRES 20 A 696 ARG ARG ILE HIS VAL SER THR ASP GLN GLY ASP THR TRP SEQRES 21 A 696 SER MET ALA GLN LEU PRO SER VAL GLY GLN GLU GLN PHE SEQRES 22 A 696 TYR SER ILE LEU ALA ALA ASN ASP ASP MET VAL PHE MET SEQRES 23 A 696 HIS VAL ASP GLU PRO GLY ASP THR GLY PHE GLY THR ILE SEQRES 24 A 696 PHE THR SER ASP ASP ARG GLY ILE VAL TYR SER LYS SER SEQRES 25 A 696 LEU ASP ARG HIS LEU TYR THR THR THR GLY GLY GLU THR SEQRES 26 A 696 ASP PHE THR ASN VAL THR SER LEU ARG GLY VAL TYR ILE SEQRES 27 A 696 THR SER VAL LEU SER GLU ASP ASN SER ILE GLN THR MET SEQRES 28 A 696 ILE THR PHE ASP GLN GLY GLY ARG TRP THR HIS LEU ARG SEQRES 29 A 696 LYS PRO GLU ASN SER GLU CYS ASP ALA THR ALA LYS ASN SEQRES 30 A 696 LYS ASN GLU CYS SER LEU HIS ILE HIS ALA SER TYR SER SEQRES 31 A 696 ILE SER GLN LYS LEU ASN VAL PRO MET ALA PRO LEU SER SEQRES 32 A 696 GLU PRO ASN ALA VAL GLY ILE VAL ILE ALA HIS GLY SER SEQRES 33 A 696 VAL GLY ASP ALA ILE SER VAL MET VAL PRO ASP VAL TYR SEQRES 34 A 696 ILE SER ASP ASP GLY GLY TYR SER TRP THR LYS MET LEU SEQRES 35 A 696 GLU GLY PRO HIS TYR TYR THR ILE LEU ASP SER GLY GLY SEQRES 36 A 696 ILE ILE VAL ALA ILE GLU HIS SER SER ARG PRO ILE ASN SEQRES 37 A 696 VAL ILE LYS PHE SER THR ASP GLU GLY GLN CYS TRP GLN SEQRES 38 A 696 THR TYR THR PHE THR ARG ASP PRO ILE TYR PHE THR GLY SEQRES 39 A 696 LEU ALA SER GLU PRO GLY ALA ARG SER MET ASN ILE SER SEQRES 40 A 696 ILE TRP GLY PHE THR GLU SER PHE LEU THR SER GLN TRP SEQRES 41 A 696 VAL SER TYR THR ILE ASP PHE LYS ASP ILE LEU GLU ARG SEQRES 42 A 696 ASN CYS GLU GLU LYS ASP TYR THR ILE TRP LEU ALA HIS SEQRES 43 A 696 SER THR ASP PRO GLU ASP TYR GLU ASP GLY CYS ILE LEU SEQRES 44 A 696 GLY TYR LYS GLU GLN PHE LEU ARG LEU ARG LYS SER SER SEQRES 45 A 696 MET CYS GLN ASN GLY ARG ASP TYR VAL VAL THR LYS GLN SEQRES 46 A 696 PRO SER ILE CYS LEU CYS SER LEU GLU ASP PHE LEU CYS SEQRES 47 A 696 ASP PHE GLY TYR TYR ARG PRO GLU ASN ASP SER LYS CYS SEQRES 48 A 696 VAL GLU GLN PRO GLU LEU LYS GLY HIS ASP LEU GLU PHE SEQRES 49 A 696 CYS LEU TYR GLY ARG GLU GLU HIS LEU THR THR ASN GLY SEQRES 50 A 696 TYR ARG LYS ILE PRO GLY ASP LYS CYS GLN GLY GLY VAL SEQRES 51 A 696 ASN PRO VAL ARG GLU VAL LYS ASP LEU LYS LYS LYS CYS SEQRES 52 A 696 THR SER ASN PHE LEU SER PRO GLU LYS GLN ASN SER LYS SEQRES 53 A 696 SER ASN SER GLY SER ALA MET ILE GLU GLY ARG GLY VAL SEQRES 54 A 696 GLY HIS HIS HIS HIS HIS HIS MODRES 4MSL ASN A 373 ASN GLYCOSYLATION SITE MODRES 4MSL ASN A 549 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET MAN B 4 11 HET NAG C 1 14 HET NAG C 2 14 HET BMA C 3 11 HET PG4 A 808 13 HET 2ET A 809 23 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM PG4 TETRAETHYLENE GLYCOL HETNAM 2ET N-[(7-HYDROXY-4-METHYL-2-OXO-2H-CHROMEN-8-YL)METHYL]-L- HETNAM 2 2ET LEUCINE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE FORMUL 2 NAG 4(C8 H15 N O6) FORMUL 2 BMA 2(C6 H12 O6) FORMUL 2 MAN C6 H12 O6 FORMUL 4 PG4 C8 H18 O5 FORMUL 5 2ET C17 H21 N O5 FORMUL 6 HOH *67(H2 O) HELIX 1 1 ASP A 58 ASN A 65 1 8 HELIX 2 2 THR A 125 ASN A 129 5 5 HELIX 3 3 ARG A 134 PHE A 137 5 4 HELIX 4 4 ALA A 431 GLN A 437 1 7 HELIX 5 5 ASP A 496 GLY A 499 5 4 HELIX 6 6 GLU A 580 LYS A 582 5 3 HELIX 7 7 SER A 636 GLU A 638 5 3 HELIX 8 8 LYS A 662 GLY A 672 1 11 HELIX 9 9 ARG A 673 LEU A 677 1 5 HELIX 10 10 LEU A 703 SER A 709 1 7 SHEET 1 A 4 THR A 67 VAL A 71 0 SHEET 2 A 4 TRP A 564 ASP A 570 -1 O THR A 568 N HIS A 68 SHEET 3 A 4 ASN A 549 PHE A 555 -1 N GLY A 554 O VAL A 565 SHEET 4 A 4 TYR A 535 SER A 541 -1 N GLY A 538 O TRP A 553 SHEET 1 B 4 VAL A 79 VAL A 84 0 SHEET 2 B 4 VAL A 90 THR A 96 -1 O LEU A 94 N SER A 80 SHEET 3 B 4 SER A 109 SER A 114 -1 O LYS A 110 N THR A 95 SHEET 4 B 4 LYS A 122 ASP A 123 -1 O LYS A 122 N ARG A 113 SHEET 1 C 4 MET A 139 ILE A 141 0 SHEET 2 C 4 VAL A 149 ALA A 153 -1 O VAL A 150 N ALA A 140 SHEET 3 C 4 ARG A 163 SER A 167 -1 O SER A 167 N VAL A 149 SHEET 4 C 4 VAL A 175 ASP A 178 -1 O VAL A 175 N ARG A 166 SHEET 1 D 4 MET A 188 TYR A 189 0 SHEET 2 D 4 LEU A 197 LEU A 200 -1 O LEU A 198 N MET A 188 SHEET 3 D 4 LEU A 206 SER A 209 -1 O TRP A 207 N ALA A 199 SHEET 4 D 4 GLU A 217 HIS A 220 -1 O GLU A 217 N VAL A 208 SHEET 1 E 7 LEU A 225 TRP A 228 0 SHEET 2 E 7 ILE A 234 THR A 238 -1 O PHE A 235 N LYS A 227 SHEET 3 E 7 LEU A 251 THR A 256 -1 O TRP A 254 N PHE A 236 SHEET 4 E 7 LYS A 264 GLY A 276 -1 O ILE A 270 N LEU A 251 SHEET 5 E 7 PHE A 279 MET A 285 -1 O SER A 283 N SER A 272 SHEET 6 E 7 ARG A 292 SER A 297 -1 O ARG A 293 N VAL A 284 SHEET 7 E 7 SER A 305 MET A 306 -1 O SER A 305 N VAL A 296 SHEET 1 F 4 TYR A 318 ASN A 324 0 SHEET 2 F 4 MET A 327 ASP A 333 -1 O HIS A 331 N SER A 319 SHEET 3 F 4 PHE A 340 SER A 346 -1 O PHE A 344 N MET A 330 SHEET 4 F 4 TYR A 353 LEU A 361 -1 O HIS A 360 N GLY A 341 SHEET 1 G 4 THR A 372 ASN A 373 0 SHEET 2 G 4 TYR A 381 LEU A 386 -1 O ILE A 382 N THR A 372 SHEET 3 G 4 ILE A 392 THR A 397 -1 O MET A 395 N THR A 383 SHEET 4 G 4 THR A 405 HIS A 406 -1 O THR A 405 N ILE A 396 SHEET 1 H 4 SER A 426 ILE A 429 0 SHEET 2 H 4 VAL A 455 GLY A 462 -1 O SER A 460 N HIS A 428 SHEET 3 H 4 ASP A 471 SER A 475 -1 O TYR A 473 N ALA A 457 SHEET 4 H 4 THR A 483 LEU A 486 -1 O THR A 483 N ILE A 474 SHEET 1 I 4 HIS A 490 LEU A 495 0 SHEET 2 I 4 ILE A 500 GLU A 505 -1 O ILE A 500 N LEU A 495 SHEET 3 I 4 VAL A 513 SER A 517 -1 O LYS A 515 N ALA A 503 SHEET 4 I 4 GLN A 525 THR A 528 -1 O TYR A 527 N ILE A 514 SHEET 1 J 3 TYR A 584 LEU A 588 0 SHEET 2 J 3 TYR A 605 LEU A 612 -1 O PHE A 609 N TRP A 587 SHEET 3 J 3 LYS A 628 ILE A 632 -1 O GLN A 629 N GLN A 608 SHEET 1 K 2 LEU A 634 CYS A 635 0 SHEET 2 K 2 GLN A 691 GLY A 693 1 O GLY A 692 N CYS A 635 SHEET 1 L 2 PHE A 640 CYS A 642 0 SHEET 2 L 2 TYR A 682 LYS A 684 -1 O ARG A 683 N LEU A 641 SHEET 1 M 2 TYR A 646 TYR A 647 0 SHEET 2 M 2 VAL A 656 GLU A 657 -1 O VAL A 656 N TYR A 647 SHEET 1 N 2 THR A 678 THR A 679 0 SHEET 2 N 2 LYS A 701 ASP A 702 -1 O LYS A 701 N THR A 679 SSBOND 1 CYS A 53 CYS A 523 1555 1555 2.05 SSBOND 2 CYS A 224 CYS A 244 1555 1555 2.36 SSBOND 3 CYS A 415 CYS A 425 1555 1555 2.04 SSBOND 4 CYS A 579 CYS A 618 1555 1555 2.04 SSBOND 5 CYS A 601 CYS A 633 1555 1555 2.03 SSBOND 6 CYS A 635 CYS A 690 1555 1555 2.04 SSBOND 7 CYS A 642 CYS A 655 1555 1555 2.05 SSBOND 8 CYS A 669 CYS A 707 1555 1555 2.04 LINK ND2 ASN A 373 C1 NAG B 1 1555 1555 1.45 LINK ND2 ASN A 549 C1 NAG C 1 1555 1555 1.46 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.44 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 LINK O6 BMA B 3 C1 MAN B 4 1555 1555 1.45 LINK O4 NAG C 1 C1 NAG C 2 1555 1555 1.46 LINK O4 NAG C 2 C1 BMA C 3 1555 1555 1.45 CRYST1 160.876 79.165 111.700 90.00 127.27 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006216 0.000000 0.004730 0.00000 SCALE2 0.000000 0.012632 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011250 0.00000