HEADER PROTEIN BINDING 19-SEP-13 4MT6 TITLE CRYSTAL STRUCTURE OF CLOSED INACTIVE COLLYBISTIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 9; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COLLYBISTIN, RAC/CDC42 GUANINE NUCLEOTIDE EXCHANGE FACTOR 9; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: ARHGEF9; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTYB12 KEYWDS CLOSED CONFORMATION, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR D.SCHNEEBERGER,H.SCHINDELIN REVDAT 3 28-FEB-24 4MT6 1 SEQADV REVDAT 2 01-OCT-14 4MT6 1 JRNL REVDAT 1 13-AUG-14 4MT6 0 JRNL AUTH T.SOYKAN,D.SCHNEEBERGER,G.TRIA,C.BUECHNER,N.BADER,D.SVERGUN, JRNL AUTH 2 I.TESSMER,A.POULOPOULOS,T.PAPADOPOULOS,F.VAROQUEAUX, JRNL AUTH 3 H.SCHINDELIN,N.BROSE JRNL TITL A CONFORMATIONAL SWITCH IN COLLYBISTIN DETERMINES THE JRNL TITL 2 DIFFERENTIATION OF INHIBITORY POSTSYNAPSES. JRNL REF EMBO J. V. 33 2113 2014 JRNL REFN ISSN 0261-4189 JRNL PMID 25082542 JRNL DOI 10.15252/EMBJ.201488143 REMARK 2 REMARK 2 RESOLUTION. 5.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 5.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 108.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 5694 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.710 REMARK 3 FREE R VALUE TEST SET COUNT : 268 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1108.6506 - 6.9301 1.00 2752 131 0.2151 0.2614 REMARK 3 2 6.9301 - 5.5007 1.00 2674 137 0.3199 0.3580 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.910 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 38.440 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 300.1 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 177.0 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3372 REMARK 3 ANGLE : 0.682 4536 REMARK 3 CHIRALITY : 0.047 462 REMARK 3 PLANARITY : 0.003 589 REMARK 3 DIHEDRAL : 15.531 1278 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 18:72 REMARK 3 ORIGIN FOR THE GROUP (A): -22.4396 -35.0715 -6.6584 REMARK 3 T TENSOR REMARK 3 T11: 1.6140 T22: 2.6357 REMARK 3 T33: 0.2029 T12: 0.7523 REMARK 3 T13: 0.7429 T23: 0.2887 REMARK 3 L TENSOR REMARK 3 L11: 1.0237 L22: 1.0644 REMARK 3 L33: 0.5848 L12: -0.0116 REMARK 3 L13: -0.6708 L23: 0.3436 REMARK 3 S TENSOR REMARK 3 S11: -0.8403 S12: -0.4057 S13: -0.8757 REMARK 3 S21: -0.0986 S22: 0.0332 S23: -0.0822 REMARK 3 S31: 0.5749 S32: -0.1128 S33: 0.4651 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 106:293 REMARK 3 ORIGIN FOR THE GROUP (A): -42.6989 -24.1394 -9.7800 REMARK 3 T TENSOR REMARK 3 T11: 0.3896 T22: 1.4153 REMARK 3 T33: 1.6232 T12: 0.3592 REMARK 3 T13: -0.1782 T23: 0.4670 REMARK 3 L TENSOR REMARK 3 L11: 2.9649 L22: 2.6656 REMARK 3 L33: 2.6673 L12: 0.1515 REMARK 3 L13: -0.1981 L23: 0.2683 REMARK 3 S TENSOR REMARK 3 S11: -0.4524 S12: 0.4546 S13: -1.1471 REMARK 3 S21: -1.1204 S22: 0.1639 S23: -0.3783 REMARK 3 S31: -0.3838 S32: -0.8042 S33: -0.2349 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESSEQ 294:439 REMARK 3 ORIGIN FOR THE GROUP (A): -23.9646 -59.0711 4.9860 REMARK 3 T TENSOR REMARK 3 T11: 1.4607 T22: 1.7060 REMARK 3 T33: 1.4207 T12: -0.2862 REMARK 3 T13: 0.1180 T23: 0.4218 REMARK 3 L TENSOR REMARK 3 L11: 5.4230 L22: 0.7853 REMARK 3 L33: 2.9333 L12: -0.5080 REMARK 3 L13: -0.5540 L23: 1.2542 REMARK 3 S TENSOR REMARK 3 S11: -1.0936 S12: -0.3532 S13: -2.0853 REMARK 3 S21: -0.0270 S22: 0.4915 S23: 0.4227 REMARK 3 S31: 1.3769 S32: -1.3564 S33: 0.5472 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MT6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : HORIZONTALLY DIFFRACTING SI REMARK 200 (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 5698 REMARK 200 RESOLUTION RANGE HIGH (A) : 5.501 REMARK 200 RESOLUTION RANGE LOW (A) : 153.625 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 11.00 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.15500 REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 5.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 5.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.20 REMARK 200 R MERGE FOR SHELL (I) : 0.01600 REMARK 200 R SYM FOR SHELL (I) : 1.56900 REMARK 200 FOR SHELL : 0.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 84.43 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20MM NA-CACODYLATE, 5MM REMARK 280 CO(III)HEXAMINE CHLORIDE, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 21 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z+1/2,-X+1/2,-Y REMARK 290 7555 -Z+1/2,-X,Y+1/2 REMARK 290 8555 -Z,X+1/2,-Y+1/2 REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z+1/2,-X+1/2 REMARK 290 11555 Y+1/2,-Z+1/2,-X REMARK 290 12555 -Y+1/2,-Z,X+1/2 REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X,-Y+1/2,Z REMARK 290 15555 -X+1/2,Y,-Z REMARK 290 16555 X,-Y,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z,-X,-Y+1/2 REMARK 290 19555 -Z,-X+1/2,Y REMARK 290 20555 -Z+1/2,X,-Y REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z,-X REMARK 290 23555 Y,-Z,-X+1/2 REMARK 290 24555 -Y,-Z+1/2,X REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 108.62950 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 108.62950 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 108.62950 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 108.62950 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 108.62950 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLN A 2 REMARK 465 TRP A 3 REMARK 465 ILE A 4 REMARK 465 ARG A 5 REMARK 465 GLY A 6 REMARK 465 GLY A 7 REMARK 465 SER A 8 REMARK 465 GLY A 9 REMARK 465 MET A 10 REMARK 465 LEU A 11 REMARK 465 ILE A 12 REMARK 465 THR A 13 REMARK 465 GLY A 14 REMARK 465 ASP A 15 REMARK 465 SER A 16 REMARK 465 ILE A 17 REMARK 465 VAL A 73 REMARK 465 ASN A 74 REMARK 465 GLN A 75 REMARK 465 GLU A 76 REMARK 465 ASP A 77 REMARK 465 GLY A 78 REMARK 465 VAL A 79 REMARK 465 GLU A 80 REMARK 465 GLU A 81 REMARK 465 GLY A 82 REMARK 465 PRO A 83 REMARK 465 SER A 84 REMARK 465 ASP A 85 REMARK 465 VAL A 86 REMARK 465 GLN A 87 REMARK 465 ASN A 88 REMARK 465 GLY A 89 REMARK 465 HIS A 90 REMARK 465 LEU A 91 REMARK 465 ASP A 92 REMARK 465 PRO A 93 REMARK 465 ASN A 94 REMARK 465 SER A 95 REMARK 465 ASP A 96 REMARK 465 CYS A 97 REMARK 465 LEU A 98 REMARK 465 CYS A 99 REMARK 465 LEU A 100 REMARK 465 GLY A 101 REMARK 465 ARG A 102 REMARK 465 PRO A 103 REMARK 465 LEU A 104 REMARK 465 GLN A 105 REMARK 465 ILE A 440 REMARK 465 GLY A 441 REMARK 465 PHE A 442 REMARK 465 GLU A 443 REMARK 465 ILE A 444 REMARK 465 SER A 445 REMARK 465 GLU A 446 REMARK 465 ASN A 447 REMARK 465 GLN A 448 REMARK 465 LYS A 449 REMARK 465 ARG A 450 REMARK 465 GLN A 451 REMARK 465 ALA A 452 REMARK 465 ALA A 453 REMARK 465 MET A 454 REMARK 465 THR A 455 REMARK 465 VAL A 456 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ARG A 296 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASN A 292 N LYS A 295 1.77 REMARK 500 O ASN A 292 N ARG A 294 1.95 REMARK 500 O LEU A 263 OG1 THR A 267 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 45 -61.64 -92.79 REMARK 500 PHE A 156 -63.28 -104.77 REMARK 500 GLN A 236 61.64 72.38 REMARK 500 ASP A 239 38.56 -76.76 REMARK 500 ALA A 241 -166.80 -67.65 REMARK 500 VAL A 250 -8.58 -59.44 REMARK 500 ASN A 292 -88.18 -69.09 REMARK 500 GLU A 293 -38.69 -9.60 REMARK 500 SER A 324 26.35 -177.47 REMARK 500 GLU A 325 132.11 -170.33 REMARK 500 TYR A 339 -7.67 77.36 REMARK 500 HIS A 352 -22.03 100.86 REMARK 500 ASP A 385 163.76 -48.83 REMARK 500 ASP A 390 106.45 -23.01 REMARK 500 PHE A 391 -95.09 12.66 REMARK 500 ASN A 392 56.79 96.44 REMARK 500 ASN A 397 64.11 61.48 REMARK 500 LYS A 415 -70.69 -89.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4MT7 RELATED DB: PDB DBREF 4MT6 A 1 456 UNP Q9QX73 ARHG9_RAT 1 456 SEQADV 4MT6 GLU A 33 UNP Q9QX73 GLY 33 ENGINEERED MUTATION SEQADV 4MT6 LEU A 34 UNP Q9QX73 VAL 34 ENGINEERED MUTATION SEQRES 1 A 456 MET GLN TRP ILE ARG GLY GLY SER GLY MET LEU ILE THR SEQRES 2 A 456 GLY ASP SER ILE VAL SER ALA GLU ALA VAL TRP ASP HIS SEQRES 3 A 456 VAL THR MET ALA ASN ARG GLU LEU ALA PHE LYS ALA GLY SEQRES 4 A 456 ASP VAL ILE LYS VAL LEU ASP ALA SER ASN LYS ASP TRP SEQRES 5 A 456 TRP TRP GLY GLN ILE ASP ASP GLU GLU GLY TRP PHE PRO SEQRES 6 A 456 ALA SER PHE VAL ARG LEU TRP VAL ASN GLN GLU ASP GLY SEQRES 7 A 456 VAL GLU GLU GLY PRO SER ASP VAL GLN ASN GLY HIS LEU SEQRES 8 A 456 ASP PRO ASN SER ASP CYS LEU CYS LEU GLY ARG PRO LEU SEQRES 9 A 456 GLN ASN ARG ASP GLN MET ARG ALA ASN VAL ILE ASN GLU SEQRES 10 A 456 ILE MET SER THR GLU ARG HIS TYR ILE LYS HIS LEU LYS SEQRES 11 A 456 ASP ILE CYS GLU GLY TYR LEU LYS GLN CYS ARG LYS ARG SEQRES 12 A 456 ARG ASP MET PHE SER ASP GLU GLN LEU LYS VAL ILE PHE SEQRES 13 A 456 GLY ASN ILE GLU ASP ILE TYR ARG PHE GLN MET GLY PHE SEQRES 14 A 456 VAL ARG ASP LEU GLU LYS GLN TYR ASN ASN ASP ASP PRO SEQRES 15 A 456 HIS LEU SER GLU ILE GLY PRO CYS PHE LEU GLU HIS GLN SEQRES 16 A 456 ASP GLY PHE TRP ILE TYR SER GLU TYR CYS ASN ASN HIS SEQRES 17 A 456 LEU ASP ALA CYS MET GLU LEU SER LYS LEU MET LYS ASP SEQRES 18 A 456 SER ARG TYR GLN HIS PHE PHE GLU ALA CYS ARG LEU LEU SEQRES 19 A 456 GLN GLN MET ILE ASP ILE ALA ILE ASP GLY PHE LEU LEU SEQRES 20 A 456 THR PRO VAL GLN LYS ILE CYS LYS TYR PRO LEU GLN LEU SEQRES 21 A 456 ALA GLU LEU LEU LYS TYR THR ALA GLN ASP HIS SER ASP SEQRES 22 A 456 TYR ARG TYR VAL ALA ALA ALA LEU ALA VAL MET ARG ASN SEQRES 23 A 456 VAL THR GLN GLN ILE ASN GLU ARG LYS ARG ARG LEU GLU SEQRES 24 A 456 ASN ILE ASP LYS ILE ALA GLN TRP GLN ALA SER VAL LEU SEQRES 25 A 456 ASP TRP GLU GLY ASP ASP ILE LEU ASP ARG SER SER GLU SEQRES 26 A 456 LEU ILE TYR THR GLY GLU MET ALA TRP ILE TYR GLN PRO SEQRES 27 A 456 TYR GLY ARG ASN GLN GLN ARG VAL PHE PHE LEU PHE ASP SEQRES 28 A 456 HIS GLN MET VAL LEU CYS LYS LYS ASP LEU ILE ARG ARG SEQRES 29 A 456 ASP ILE LEU TYR TYR LYS GLY ARG ILE ASP MET ASP LYS SEQRES 30 A 456 TYR GLU VAL ILE ASP ILE GLU ASP GLY ARG ASP ASP ASP SEQRES 31 A 456 PHE ASN VAL SER MET LYS ASN ALA PHE LYS LEU HIS ASN SEQRES 32 A 456 LYS GLU THR GLU GLU VAL HIS LEU PHE PHE ALA LYS LYS SEQRES 33 A 456 LEU GLU GLU LYS ILE ARG TRP LEU ARG ALA PHE ARG GLU SEQRES 34 A 456 GLU ARG LYS MET VAL GLN GLU ASP GLU LYS ILE GLY PHE SEQRES 35 A 456 GLU ILE SER GLU ASN GLN LYS ARG GLN ALA ALA MET THR SEQRES 36 A 456 VAL HELIX 1 1 PRO A 65 SER A 67 5 3 HELIX 2 2 ARG A 107 TYR A 136 1 30 HELIX 3 3 TYR A 136 ARG A 143 1 8 HELIX 4 4 SER A 148 PHE A 156 1 9 HELIX 5 5 ASN A 158 TYR A 177 1 20 HELIX 6 6 ASP A 181 SER A 185 5 5 HELIX 7 7 ILE A 187 HIS A 194 1 8 HELIX 8 8 TRP A 199 ASN A 207 1 9 HELIX 9 9 ASN A 207 LYS A 220 1 14 HELIX 10 10 ASP A 221 GLN A 235 1 15 HELIX 11 11 ALA A 241 LEU A 246 1 6 HELIX 12 12 THR A 248 TYR A 266 1 19 HELIX 13 13 ASP A 273 ASN A 300 1 28 HELIX 14 14 ILE A 301 ALA A 309 1 9 HELIX 15 15 ASP A 318 ARG A 322 5 5 HELIX 16 16 LYS A 416 LYS A 439 1 24 SHEET 1 A 5 GLU A 61 PHE A 64 0 SHEET 2 A 5 TRP A 53 GLN A 56 -1 N GLY A 55 O GLY A 62 SHEET 3 A 5 VAL A 41 VAL A 44 -1 N LYS A 43 O GLN A 56 SHEET 4 A 5 SER A 19 ALA A 22 -1 N ALA A 20 O ILE A 42 SHEET 5 A 5 VAL A 69 LEU A 71 -1 O ARG A 70 N GLU A 21 SHEET 1 B 7 LEU A 367 ASP A 374 0 SHEET 2 B 7 GLN A 353 LYS A 359 -1 N MET A 354 O ILE A 373 SHEET 3 B 7 GLN A 343 PHE A 350 -1 N PHE A 350 O GLN A 353 SHEET 4 B 7 LEU A 326 ILE A 335 -1 N ILE A 327 O LEU A 349 SHEET 5 B 7 VAL A 409 PHE A 413 -1 O PHE A 413 N ALA A 333 SHEET 6 B 7 ALA A 398 ASN A 403 -1 N PHE A 399 O PHE A 412 SHEET 7 B 7 TYR A 378 ILE A 381 -1 N ILE A 381 O LYS A 400 SHEET 1 C 2 GLY A 386 ARG A 387 0 SHEET 2 C 2 SER A 394 MET A 395 -1 O MET A 395 N GLY A 386 CISPEP 1 ASP A 390 PHE A 391 0 -0.19 CRYST1 217.259 217.259 217.259 90.00 90.00 90.00 I 21 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004603 0.000000 0.000000 0.00000 SCALE2 0.000000 0.004603 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004603 0.00000