data_4MWN # _entry.id 4MWN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4MWN RCSB RCSB082458 WWPDB D_1000082458 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2016-05-18 _pdbx_database_PDB_obs_spr.pdb_id 5I5Q _pdbx_database_PDB_obs_spr.replace_pdb_id 4MWN _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4MWM . unspecified PDB 4MWN . unspecified # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 4MWN _pdbx_database_status.recvd_initial_deposition_date 2013-09-25 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tanley, S.W.M.' 1 'Helliwell, J.R.' 2 # _citation.id primary _citation.title 'X-ray crystal structures of cisplatin binding to histidine in a protein at multiple temperatures reveals their structural dynamics' _citation.journal_abbrev Struct.Dyn. _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2329-7778 _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI dx.doi.org/10.1063/1.4883975 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tanley, S.W.M.' 1 primary 'Helliwell, J.R.' 2 # _cell.entry_id 4MWN _cell.length_a 27.346 _cell.length_b 32.134 _cell.length_c 34.296 _cell.angle_alpha 88.04 _cell.angle_beta 71.17 _cell.angle_gamma 68.35 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4MWN _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'Lysozyme C' 14402.236 1 3.2.1.17 ? ? ? 2 non-polymer syn 'DIMETHYL SULFOXIDE' 78.133 6 ? ? ? ? 3 non-polymer syn Cisplatin 300.045 2 ? ? ? ? 4 non-polymer syn 'PLATINUM (II) ION' 195.078 1 ? ? ? ? 5 non-polymer syn 'NITRATE ION' 62.005 1 ? ? ? ? 6 water nat water 18.015 41 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name '1,4-beta-N-acetylmuramidase C, Allergen Gal d IV' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;AKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIP CSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_seq_one_letter_code_can ;AKVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIP CSALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 LYS n 1 3 VAL n 1 4 PHE n 1 5 GLY n 1 6 ARG n 1 7 CYS n 1 8 GLU n 1 9 LEU n 1 10 ALA n 1 11 ALA n 1 12 ALA n 1 13 MET n 1 14 LYS n 1 15 ARG n 1 16 HIS n 1 17 GLY n 1 18 LEU n 1 19 ASP n 1 20 ASN n 1 21 TYR n 1 22 ARG n 1 23 GLY n 1 24 TYR n 1 25 SER n 1 26 LEU n 1 27 GLY n 1 28 ASN n 1 29 TRP n 1 30 VAL n 1 31 CYS n 1 32 ALA n 1 33 ALA n 1 34 LYS n 1 35 PHE n 1 36 GLU n 1 37 SER n 1 38 ASN n 1 39 PHE n 1 40 ASN n 1 41 THR n 1 42 GLN n 1 43 ALA n 1 44 THR n 1 45 ASN n 1 46 ARG n 1 47 ASN n 1 48 THR n 1 49 ASP n 1 50 GLY n 1 51 SER n 1 52 THR n 1 53 ASP n 1 54 TYR n 1 55 GLY n 1 56 ILE n 1 57 LEU n 1 58 GLN n 1 59 ILE n 1 60 ASN n 1 61 SER n 1 62 ARG n 1 63 TRP n 1 64 TRP n 1 65 CYS n 1 66 ASN n 1 67 ASP n 1 68 GLY n 1 69 ARG n 1 70 THR n 1 71 PRO n 1 72 GLY n 1 73 SER n 1 74 ARG n 1 75 ASN n 1 76 LEU n 1 77 CYS n 1 78 ASN n 1 79 ILE n 1 80 PRO n 1 81 CYS n 1 82 SER n 1 83 ALA n 1 84 LEU n 1 85 LEU n 1 86 SER n 1 87 SER n 1 88 ASP n 1 89 ILE n 1 90 THR n 1 91 ALA n 1 92 SER n 1 93 VAL n 1 94 ASN n 1 95 CYS n 1 96 ALA n 1 97 LYS n 1 98 LYS n 1 99 ILE n 1 100 VAL n 1 101 SER n 1 102 ASP n 1 103 GLY n 1 104 ASN n 1 105 GLY n 1 106 MET n 1 107 ASN n 1 108 ALA n 1 109 TRP n 1 110 VAL n 1 111 ALA n 1 112 TRP n 1 113 ARG n 1 114 ASN n 1 115 ARG n 1 116 CYS n 1 117 LYS n 1 118 GLY n 1 119 THR n 1 120 ASP n 1 121 VAL n 1 122 GLN n 1 123 ALA n 1 124 TRP n 1 125 ILE n 1 126 ARG n 1 127 GLY n 1 128 CYS n 1 129 ARG n 1 130 LEU n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name bantam,chickens _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code LYSC_CHICK _struct_ref.pdbx_db_accession P00698 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; _struct_ref.pdbx_align_begin 19 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4MWN _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 130 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P00698 _struct_ref_seq.db_align_beg 19 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 147 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 129 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4MWN _struct_ref_seq_dif.mon_id ALA _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code P00698 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CPT non-polymer . Cisplatin 'diammine(dichloro)platinum' 'Cl2 H6 N2 Pt' 300.045 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DMS non-polymer . 'DIMETHYL SULFOXIDE' ? 'C2 H6 O S' 78.133 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 PT non-polymer . 'PLATINUM (II) ION' ? 'Pt 2' 195.078 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4MWN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.83 _exptl_crystal.density_percent_sol 32.87 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method EVAPORATION _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.7 _exptl_crystal_grow.pdbx_details ;40mg HEWL co-crystallised with 2.6mg cisplatin, with the platinum compounds being in a 3-fold molar excess to the protein, 462.5 ul of a 0.02M NaAc solution along with 462.5 ul of a 0.5M NaNo3 solution was used with 75 ul DMSO added, Batch, pH 4.7, EVAPORATION, temperature 294K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 294 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'APEX II CCD' _diffrn_detector.pdbx_collection_date 2012-12-15 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'confocal mirror optics' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'SEALED TUBE' _diffrn_source.type 'BRUKER AXS MICROSTAR-H' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 # _reflns.entry_id 4MWN _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 4 _reflns.d_resolution_low 32.31 _reflns.d_resolution_high 1.42 _reflns.number_obs 18176 _reflns.number_all 19160 _reflns.percent_possible_obs 94.8 _reflns.pdbx_Rmerge_I_obs 0.145 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 6.8 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.42 _reflns_shell.d_res_low 1.51 _reflns_shell.percent_possible_all 98.5 _reflns_shell.Rmerge_I_obs 0.554 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 1.1 _reflns_shell.pdbx_redundancy 2.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4MWN _refine.ls_number_reflns_obs 18176 _refine.ls_number_reflns_all 19160 _refine.pdbx_ls_sigma_I 2 _refine.pdbx_ls_sigma_F 4 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.31 _refine.ls_d_res_high 1.42 _refine.ls_percent_reflns_obs 99.21 _refine.ls_R_factor_obs 0.20978 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.20840 _refine.ls_R_factor_R_free 0.23506 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 984 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.939 _refine.B_iso_mean 15.362 _refine.aniso_B[1][1] 0.10 _refine.aniso_B[2][2] -0.28 _refine.aniso_B[3][3] 0.26 _refine.aniso_B[1][2] 0.31 _refine.aniso_B[1][3] -0.15 _refine.aniso_B[2][3] -0.01 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.084 _refine.pdbx_overall_ESU_R_Free 0.082 _refine.overall_SU_ML 0.060 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.514 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 992 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 32 _refine_hist.number_atoms_solvent 41 _refine_hist.number_atoms_total 1065 _refine_hist.d_res_high 1.42 _refine_hist.d_res_low 32.31 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.020 0.019 ? 1038 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2.247 1.914 ? 1397 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.676 5.000 ? 127 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 30.767 23.000 ? 50 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.481 15.000 ? 164 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 17.917 15.000 ? 11 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.155 0.200 ? 148 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.013 0.020 ? 790 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1.591 1.237 ? 511 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2.405 1.852 ? 637 ? 'X-RAY DIFFRACTION' r_mcangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it 3.305 1.674 ? 527 ? 'X-RAY DIFFRACTION' r_scbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_long_range_B_refined 5.866 11.672 ? 1599 ? 'X-RAY DIFFRACTION' r_long_range_B_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.420 _refine_ls_shell.d_res_low 1.457 _refine_ls_shell.number_reflns_R_work 1356 _refine_ls_shell.R_factor_R_work 0.272 _refine_ls_shell.percent_reflns_obs 98.49 _refine_ls_shell.R_factor_R_free 0.260 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 80 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4MWN _struct.title 'Triclinic HEWL co-crystallised with cisplatin, studied at a data collection temperature of 294K' _struct.pdbx_descriptor 'Lysozyme C (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4MWN _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text Hydrolase # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 3 ? H N N 2 ? I N N 2 ? J N N 4 ? K N N 5 ? L N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 5 ? HIS A 16 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P2 2 ASN A 20 ? TYR A 24 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P3 3 SER A 25 ? ASN A 38 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P4 4 PRO A 80 ? SER A 86 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P5 5 ILE A 89 ? GLY A 103 ? ILE A 88 GLY A 102 1 ? 15 HELX_P HELX_P6 6 GLY A 105 ? ALA A 108 ? GLY A 104 ALA A 107 5 ? 4 HELX_P HELX_P7 7 TRP A 109 ? CYS A 116 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P8 8 ASP A 120 ? ILE A 125 ? ASP A 119 ILE A 124 5 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 128 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.043 ? disulf2 disulf ? ? A CYS 31 SG ? ? ? 1_555 A CYS 116 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 1.978 ? disulf3 disulf ? ? A CYS 65 SG ? ? ? 1_555 A CYS 81 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.003 ? disulf4 disulf ? ? A CYS 77 SG ? ? ? 1_555 A CYS 95 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.007 ? metalc1 metalc ? ? A HIS 16 ND1 ? ? ? 1_555 F CPT . PT1 ? ? A HIS 15 A CPT 205 1_555 ? ? ? ? ? ? ? 2.108 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 THR A 44 ? ARG A 46 ? THR A 43 ARG A 45 A 2 THR A 52 ? TYR A 54 ? THR A 51 TYR A 53 A 3 ILE A 59 ? ASN A 60 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 45 ? N ASN A 44 O ASP A 53 ? O ASP A 52 A 2 3 N TYR A 54 ? N TYR A 53 O ILE A 59 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE DMS A 201' AC2 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE DMS A 202' AC3 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE DMS A 203' AC4 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE DMS A 204' AC5 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CPT A 205' AC6 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE CPT A 206' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE DMS A 207' AC8 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE DMS A 208' AC9 Software ? ? ? ? 2 'BINDING SITE FOR RESIDUE PT A 209' BC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NO3 A 210' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 ASN A 45 ? ASN A 44 . ? 1_555 ? 2 AC1 3 ARG A 46 ? ARG A 45 . ? 1_555 ? 3 AC1 3 ASN A 78 ? ASN A 77 . ? 1_655 ? 4 AC2 7 GLY A 5 ? GLY A 4 . ? 1_555 ? 5 AC2 7 CYS A 7 ? CYS A 6 . ? 1_555 ? 6 AC2 7 GLU A 8 ? GLU A 7 . ? 1_555 ? 7 AC2 7 LYS A 98 ? LYS A 97 . ? 1_556 ? 8 AC2 7 ASP A 102 ? ASP A 101 . ? 1_556 ? 9 AC2 7 HOH L . ? HOH A 310 . ? 1_555 ? 10 AC2 7 HOH L . ? HOH A 323 . ? 1_556 ? 11 AC3 7 ASN A 66 ? ASN A 65 . ? 1_555 ? 12 AC3 7 ASN A 75 ? ASN A 74 . ? 1_555 ? 13 AC3 7 ASN A 78 ? ASN A 77 . ? 1_555 ? 14 AC3 7 ILE A 79 ? ILE A 78 . ? 1_555 ? 15 AC3 7 PRO A 80 ? PRO A 79 . ? 1_555 ? 16 AC3 7 ARG A 113 ? ARG A 112 . ? 1_465 ? 17 AC3 7 LYS A 117 ? LYS A 116 . ? 1_465 ? 18 AC4 6 GLN A 58 ? GLN A 57 . ? 1_555 ? 19 AC4 6 ILE A 59 ? ILE A 58 . ? 1_555 ? 20 AC4 6 ASN A 60 ? ASN A 59 . ? 1_555 ? 21 AC4 6 TRP A 64 ? TRP A 63 . ? 1_555 ? 22 AC4 6 ALA A 108 ? ALA A 107 . ? 1_555 ? 23 AC4 6 TRP A 109 ? TRP A 108 . ? 1_555 ? 24 AC5 5 HIS A 16 ? HIS A 15 . ? 1_555 ? 25 AC5 5 VAL A 93 ? VAL A 92 . ? 1_555 ? 26 AC5 5 ASN A 94 ? ASN A 93 . ? 1_555 ? 27 AC5 5 LYS A 97 ? LYS A 96 . ? 1_555 ? 28 AC5 5 DMS H . ? DMS A 207 . ? 1_455 ? 29 AC6 2 HIS A 16 ? HIS A 15 . ? 1_555 ? 30 AC6 2 PT J . ? PT A 209 . ? 1_555 ? 31 AC7 5 LYS A 34 ? LYS A 33 . ? 1_555 ? 32 AC7 5 PHE A 35 ? PHE A 34 . ? 1_555 ? 33 AC7 5 ASN A 38 ? ASN A 37 . ? 1_555 ? 34 AC7 5 LYS A 97 ? LYS A 96 . ? 1_655 ? 35 AC7 5 CPT F . ? CPT A 205 . ? 1_655 ? 36 AC8 6 SER A 25 ? SER A 24 . ? 1_555 ? 37 AC8 6 LEU A 26 ? LEU A 25 . ? 1_555 ? 38 AC8 6 GLY A 27 ? GLY A 26 . ? 1_555 ? 39 AC8 6 GLN A 42 ? GLN A 41 . ? 1_545 ? 40 AC8 6 GLN A 122 ? GLN A 121 . ? 1_555 ? 41 AC8 6 ILE A 125 ? ILE A 124 . ? 1_555 ? 42 AC9 2 HIS A 16 ? HIS A 15 . ? 1_555 ? 43 AC9 2 CPT G . ? CPT A 206 . ? 1_555 ? 44 BC1 6 ARG A 22 ? ARG A 21 . ? 1_565 ? 45 BC1 6 ASP A 67 ? ASP A 66 . ? 1_555 ? 46 BC1 6 PRO A 80 ? PRO A 79 . ? 1_555 ? 47 BC1 6 CYS A 81 ? CYS A 80 . ? 1_555 ? 48 BC1 6 SER A 82 ? SER A 81 . ? 1_555 ? 49 BC1 6 HOH L . ? HOH A 318 . ? 1_465 ? # _database_PDB_matrix.entry_id 4MWN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4MWN _atom_sites.fract_transf_matrix[1][1] 0.036568 _atom_sites.fract_transf_matrix[1][2] -0.014513 _atom_sites.fract_transf_matrix[1][3] -0.013940 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.033481 _atom_sites.fract_transf_matrix[2][3] 0.003247 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.030952 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O PT S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 0 ? ? ? A . n A 1 2 LYS 2 1 1 LYS LYS A . n A 1 3 VAL 3 2 2 VAL VAL A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 GLY 5 4 4 GLY GLY A . n A 1 6 ARG 6 5 5 ARG ARG A . n A 1 7 CYS 7 6 6 CYS CYS A . n A 1 8 GLU 8 7 7 GLU GLU A . n A 1 9 LEU 9 8 8 LEU LEU A . n A 1 10 ALA 10 9 9 ALA ALA A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 ALA 12 11 11 ALA ALA A . n A 1 13 MET 13 12 12 MET MET A . n A 1 14 LYS 14 13 13 LYS LYS A . n A 1 15 ARG 15 14 14 ARG ARG A . n A 1 16 HIS 16 15 15 HIS HIS A . n A 1 17 GLY 17 16 16 GLY GLY A . n A 1 18 LEU 18 17 17 LEU LEU A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 ASN 20 19 19 ASN ASN A . n A 1 21 TYR 21 20 20 TYR TYR A . n A 1 22 ARG 22 21 21 ARG ARG A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 TYR 24 23 23 TYR TYR A . n A 1 25 SER 25 24 24 SER SER A . n A 1 26 LEU 26 25 25 LEU LEU A . n A 1 27 GLY 27 26 26 GLY GLY A . n A 1 28 ASN 28 27 27 ASN ASN A . n A 1 29 TRP 29 28 28 TRP TRP A . n A 1 30 VAL 30 29 29 VAL VAL A . n A 1 31 CYS 31 30 30 CYS CYS A . n A 1 32 ALA 32 31 31 ALA ALA A . n A 1 33 ALA 33 32 32 ALA ALA A . n A 1 34 LYS 34 33 33 LYS LYS A . n A 1 35 PHE 35 34 34 PHE PHE A . n A 1 36 GLU 36 35 35 GLU GLU A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 ASN 38 37 37 ASN ASN A . n A 1 39 PHE 39 38 38 PHE PHE A . n A 1 40 ASN 40 39 39 ASN ASN A . n A 1 41 THR 41 40 40 THR THR A . n A 1 42 GLN 42 41 41 GLN GLN A . n A 1 43 ALA 43 42 42 ALA ALA A . n A 1 44 THR 44 43 43 THR THR A . n A 1 45 ASN 45 44 44 ASN ASN A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ASN 47 46 46 ASN ASN A . n A 1 48 THR 48 47 47 THR THR A . n A 1 49 ASP 49 48 48 ASP ASP A . n A 1 50 GLY 50 49 49 GLY GLY A . n A 1 51 SER 51 50 50 SER SER A . n A 1 52 THR 52 51 51 THR THR A . n A 1 53 ASP 53 52 52 ASP ASP A . n A 1 54 TYR 54 53 53 TYR TYR A . n A 1 55 GLY 55 54 54 GLY GLY A . n A 1 56 ILE 56 55 55 ILE ILE A . n A 1 57 LEU 57 56 56 LEU LEU A . n A 1 58 GLN 58 57 57 GLN GLN A . n A 1 59 ILE 59 58 58 ILE ILE A . n A 1 60 ASN 60 59 59 ASN ASN A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 ARG 62 61 61 ARG ARG A . n A 1 63 TRP 63 62 62 TRP TRP A . n A 1 64 TRP 64 63 63 TRP TRP A . n A 1 65 CYS 65 64 64 CYS CYS A . n A 1 66 ASN 66 65 65 ASN ASN A . n A 1 67 ASP 67 66 66 ASP ASP A . n A 1 68 GLY 68 67 67 GLY GLY A . n A 1 69 ARG 69 68 68 ARG ARG A . n A 1 70 THR 70 69 69 THR THR A . n A 1 71 PRO 71 70 70 PRO PRO A . n A 1 72 GLY 72 71 71 GLY GLY A . n A 1 73 SER 73 72 72 SER SER A . n A 1 74 ARG 74 73 73 ARG ARG A . n A 1 75 ASN 75 74 74 ASN ASN A . n A 1 76 LEU 76 75 75 LEU LEU A . n A 1 77 CYS 77 76 76 CYS CYS A . n A 1 78 ASN 78 77 77 ASN ASN A . n A 1 79 ILE 79 78 78 ILE ILE A . n A 1 80 PRO 80 79 79 PRO PRO A . n A 1 81 CYS 81 80 80 CYS CYS A . n A 1 82 SER 82 81 81 SER SER A . n A 1 83 ALA 83 82 82 ALA ALA A . n A 1 84 LEU 84 83 83 LEU LEU A . n A 1 85 LEU 85 84 84 LEU LEU A . n A 1 86 SER 86 85 85 SER SER A . n A 1 87 SER 87 86 86 SER SER A . n A 1 88 ASP 88 87 87 ASP ASP A . n A 1 89 ILE 89 88 88 ILE ILE A . n A 1 90 THR 90 89 89 THR THR A . n A 1 91 ALA 91 90 90 ALA ALA A . n A 1 92 SER 92 91 91 SER SER A . n A 1 93 VAL 93 92 92 VAL VAL A . n A 1 94 ASN 94 93 93 ASN ASN A . n A 1 95 CYS 95 94 94 CYS CYS A . n A 1 96 ALA 96 95 95 ALA ALA A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 ILE 99 98 98 ILE ILE A . n A 1 100 VAL 100 99 99 VAL VAL A . n A 1 101 SER 101 100 100 SER SER A . n A 1 102 ASP 102 101 101 ASP ASP A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 ASN 104 103 103 ASN ASN A . n A 1 105 GLY 105 104 104 GLY GLY A . n A 1 106 MET 106 105 105 MET MET A . n A 1 107 ASN 107 106 106 ASN ASN A . n A 1 108 ALA 108 107 107 ALA ALA A . n A 1 109 TRP 109 108 108 TRP TRP A . n A 1 110 VAL 110 109 109 VAL VAL A . n A 1 111 ALA 111 110 110 ALA ALA A . n A 1 112 TRP 112 111 111 TRP TRP A . n A 1 113 ARG 113 112 112 ARG ARG A . n A 1 114 ASN 114 113 113 ASN ASN A . n A 1 115 ARG 115 114 114 ARG ARG A . n A 1 116 CYS 116 115 115 CYS CYS A . n A 1 117 LYS 117 116 116 LYS LYS A . n A 1 118 GLY 118 117 117 GLY GLY A . n A 1 119 THR 119 118 118 THR THR A . n A 1 120 ASP 120 119 119 ASP ASP A . n A 1 121 VAL 121 120 120 VAL VAL A . n A 1 122 GLN 122 121 121 GLN GLN A . n A 1 123 ALA 123 122 122 ALA ALA A . n A 1 124 TRP 124 123 123 TRP TRP A . n A 1 125 ILE 125 124 124 ILE ILE A . n A 1 126 ARG 126 125 125 ARG ARG A . n A 1 127 GLY 127 126 126 GLY GLY A . n A 1 128 CYS 128 127 127 CYS CYS A . n A 1 129 ARG 129 128 128 ARG ARG A . n A 1 130 LEU 130 129 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 DMS 1 201 1 DMS DMS A . C 2 DMS 1 202 2 DMS DMS A . D 2 DMS 1 203 1 DMS DMS A . E 2 DMS 1 204 1 DMS DMS A . F 3 CPT 1 205 1 CPT CPT A . G 3 CPT 1 206 1 CPT CPT A . H 2 DMS 1 207 1 DMS DMS A . I 2 DMS 1 208 1 DMS DMS A . J 4 PT 1 209 1 PT PT A . K 5 NO3 1 210 1 NO3 NO3 A . L 6 HOH 1 301 1 HOH HOH A . L 6 HOH 2 302 2 HOH HOH A . L 6 HOH 3 303 3 HOH HOH A . L 6 HOH 4 304 4 HOH HOH A . L 6 HOH 5 305 5 HOH HOH A . L 6 HOH 6 306 6 HOH HOH A . L 6 HOH 7 307 7 HOH HOH A . L 6 HOH 8 308 8 HOH HOH A . L 6 HOH 9 309 9 HOH HOH A . L 6 HOH 10 310 10 HOH HOH A . L 6 HOH 11 311 11 HOH HOH A . L 6 HOH 12 312 12 HOH HOH A . L 6 HOH 13 313 13 HOH HOH A . L 6 HOH 14 314 14 HOH HOH A . L 6 HOH 15 315 15 HOH HOH A . L 6 HOH 16 316 16 HOH HOH A . L 6 HOH 17 317 17 HOH HOH A . L 6 HOH 18 318 18 HOH HOH A . L 6 HOH 19 319 20 HOH HOH A . L 6 HOH 20 320 21 HOH HOH A . L 6 HOH 21 321 22 HOH HOH A . L 6 HOH 22 322 23 HOH HOH A . L 6 HOH 23 323 25 HOH HOH A . L 6 HOH 24 324 26 HOH HOH A . L 6 HOH 25 325 27 HOH HOH A . L 6 HOH 26 326 28 HOH HOH A . L 6 HOH 27 327 29 HOH HOH A . L 6 HOH 28 328 30 HOH HOH A . L 6 HOH 29 329 31 HOH HOH A . L 6 HOH 30 330 32 HOH HOH A . L 6 HOH 31 331 33 HOH HOH A . L 6 HOH 32 332 35 HOH HOH A . L 6 HOH 33 333 36 HOH HOH A . L 6 HOH 34 334 37 HOH HOH A . L 6 HOH 35 335 38 HOH HOH A . L 6 HOH 36 336 39 HOH HOH A . L 6 HOH 37 337 40 HOH HOH A . L 6 HOH 38 338 44 HOH HOH A . L 6 HOH 39 339 45 HOH HOH A . L 6 HOH 40 340 46 HOH HOH A . L 6 HOH 41 341 47 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_conn_angle.id 1 _pdbx_struct_conn_angle.ptnr1_label_atom_id ND1 _pdbx_struct_conn_angle.ptnr1_label_alt_id ? _pdbx_struct_conn_angle.ptnr1_label_asym_id A _pdbx_struct_conn_angle.ptnr1_label_comp_id HIS _pdbx_struct_conn_angle.ptnr1_label_seq_id 16 _pdbx_struct_conn_angle.ptnr1_auth_atom_id ? _pdbx_struct_conn_angle.ptnr1_auth_asym_id A _pdbx_struct_conn_angle.ptnr1_auth_comp_id HIS _pdbx_struct_conn_angle.ptnr1_auth_seq_id 15 _pdbx_struct_conn_angle.ptnr1_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr1_symmetry 1_555 _pdbx_struct_conn_angle.ptnr2_label_atom_id PT1 _pdbx_struct_conn_angle.ptnr2_label_alt_id ? _pdbx_struct_conn_angle.ptnr2_label_asym_id F _pdbx_struct_conn_angle.ptnr2_label_comp_id CPT _pdbx_struct_conn_angle.ptnr2_label_seq_id . _pdbx_struct_conn_angle.ptnr2_auth_atom_id ? _pdbx_struct_conn_angle.ptnr2_auth_asym_id A _pdbx_struct_conn_angle.ptnr2_auth_comp_id CPT _pdbx_struct_conn_angle.ptnr2_auth_seq_id 205 _pdbx_struct_conn_angle.ptnr2_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr2_symmetry 1_555 _pdbx_struct_conn_angle.ptnr3_label_atom_id CL1 _pdbx_struct_conn_angle.ptnr3_label_alt_id ? _pdbx_struct_conn_angle.ptnr3_label_asym_id F _pdbx_struct_conn_angle.ptnr3_label_comp_id CPT _pdbx_struct_conn_angle.ptnr3_label_seq_id . _pdbx_struct_conn_angle.ptnr3_auth_atom_id ? _pdbx_struct_conn_angle.ptnr3_auth_asym_id A _pdbx_struct_conn_angle.ptnr3_auth_comp_id CPT _pdbx_struct_conn_angle.ptnr3_auth_seq_id 205 _pdbx_struct_conn_angle.ptnr3_PDB_ins_code ? _pdbx_struct_conn_angle.ptnr3_symmetry 1_555 _pdbx_struct_conn_angle.value 108.2 _pdbx_struct_conn_angle.value_esd ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-08-13 2 'Structure model' 1 1 2016-05-18 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal APEX 'data collection' . ? 1 Phaser-MR 'model building' . ? 2 REFMAC refinement 5.7.0032 ? 3 SAINT 'data reduction' . ? 4 APEX 'data scaling' . ? 5 Phaser-MR phasing . ? 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 CB A GLU 7 ? ? O A DMS 202 ? ? 1.71 2 1 CB A SER 72 ? ? O A HOH 341 ? ? 1.83 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 100 ? ? -70.11 -71.43 2 1 ASN A 103 ? ? -84.01 -149.35 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 N 1 A CPT 206 ? N1 ? G CPT 1 N1 2 1 N 1 A CPT 206 ? N2 ? G CPT 1 N2 3 1 N 1 A CPT 206 ? CL2 ? G CPT 1 CL2 4 1 N 1 A CPT 206 ? CL1 ? G CPT 1 CL1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA 0 ? A ALA 1 2 1 Y 1 A LEU 129 ? A LEU 130 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'DIMETHYL SULFOXIDE' DMS 3 Cisplatin CPT 4 'PLATINUM (II) ION' PT 5 'NITRATE ION' NO3 6 water HOH #