HEADER TRANSFERASE/TRANSFERASE INHIBITOR 26-SEP-13 4MX9 TITLE CDPK1 FROM NEOSPORA CANINUM IN COMPLEX WITH INHIBITOR UW1294 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CALMODULIN-LIKE DOMAIN PROTEIN KINASE ISOENZYME GAMMA, COMPND 3 RELATED; COMPND 4 CHAIN: A; COMPND 5 FRAGMENT: RESIDUES 22-506; COMPND 6 EC: 2.7.11.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEOSPORA CANINUM; SOURCE 3 ORGANISM_TAXID: 572307; SOURCE 4 STRAIN: LIVERPOOL; SOURCE 5 GENE: CDPK1, NCLIV_011980, XP_003880764; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: AVA0421 KEYWDS SERINE/THREONINE PROTEIN KINASE, TRANSFERASE, CALCIUM-BINDING, ATP- KEYWDS 2 BINDING, TRANSFERASE-TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.A.MERRITT REVDAT 3 20-SEP-23 4MX9 1 REMARK REVDAT 2 07-MAY-14 4MX9 1 JRNL REVDAT 1 09-OCT-13 4MX9 0 JRNL AUTH K.K.OJO,M.C.REID,L.KALLUR SIDDARAMAIAH,J.MULLER,P.WINZER, JRNL AUTH 2 Z.ZHANG,K.R.KEYLOUN,R.S.VIDADALA,E.A.MERRITT,W.G.HOL, JRNL AUTH 3 D.J.MALY,E.FAN,W.C.VAN VOORHIS,A.HEMPHILL JRNL TITL NEOSPORA CANINUM CALCIUM-DEPENDENT PROTEIN KINASE 1 IS AN JRNL TITL 2 EFFECTIVE DRUG TARGET FOR NEOSPOROSIS THERAPY. JRNL REF PLOS ONE V. 9 92929 2014 JRNL REFN ESSN 1932-6203 JRNL PMID 24681759 JRNL DOI 10.1371/JOURNAL.PONE.0092929 REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH K.K.OJO,E.T.LARSON,K.R.KEYLOUN,L.J.CASTANEDA,A.E.DEROCHER, REMARK 1 AUTH 2 K.K.INAMPUDI,J.E.KIM,T.L.ARAKAKI,R.C.MURPHY,L.ZHANG, REMARK 1 AUTH 3 A.J.NAPULI,D.J.MALY,C.L.VERLINDE,F.S.BUCKNER,M.PARSONS, REMARK 1 AUTH 4 W.G.HOL,E.A.MERRITT,W.C.VAN VOORHIS REMARK 1 TITL TOXOPLASMA GONDII CALCIUM-DEPENDENT PROTEIN KINASE 1 IS A REMARK 1 TITL 2 TARGET FOR SELECTIVE KINASE INHIBITORS. REMARK 1 REF NAT.STRUCT.MOL.BIOL. V. 17 602 2010 REMARK 1 REFN ISSN 1545-9993 REMARK 1 PMID 20436472 REMARK 1 DOI 10.1038/NSMB.1818 REMARK 2 REMARK 2 RESOLUTION. 3.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.76 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 85.7 REMARK 3 NUMBER OF REFLECTIONS : 7197 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.250 REMARK 3 R VALUE (WORKING SET) : 0.249 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.700 REMARK 3 FREE R VALUE TEST SET COUNT : 336 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.18 REMARK 3 REFLECTION IN BIN (WORKING SET) : 418 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 66.93 REMARK 3 BIN R VALUE (WORKING SET) : 0.3980 REMARK 3 BIN FREE R VALUE SET COUNT : 9 REMARK 3 BIN FREE R VALUE : 0.4690 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3670 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 24 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.02000 REMARK 3 B22 (A**2) : 2.30000 REMARK 3 B33 (A**2) : -4.52000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 2.75000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.674 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.541 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 67.990 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.891 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.845 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3813 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 3665 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5145 ; 1.438 ; 1.979 REMARK 3 BOND ANGLES OTHERS (DEGREES): 8464 ; 0.934 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 471 ; 5.437 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 182 ;37.618 ;24.945 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 725 ;16.480 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;16.010 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 569 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4278 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 846 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1848 ; 1.893 ; 2.720 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1847 ; 1.893 ; 2.720 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2310 ; 3.371 ; 4.068 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 42 A 212 REMARK 3 ORIGIN FOR THE GROUP (A): 4.1394 -21.1150 -30.0476 REMARK 3 T TENSOR REMARK 3 T11: 0.4810 T22: 0.4475 REMARK 3 T33: 0.4860 T12: 0.0521 REMARK 3 T13: -0.0348 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 0.2729 L22: 1.7578 REMARK 3 L33: 3.5308 L12: 0.6305 REMARK 3 L13: 0.0167 L23: 0.4206 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: -0.0878 S13: -0.0887 REMARK 3 S21: -0.0680 S22: -0.2024 S23: 0.1002 REMARK 3 S31: -0.2851 S32: -0.1014 S33: 0.1390 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 213 A 313 REMARK 3 ORIGIN FOR THE GROUP (A): 7.8133 -14.5137 -8.2019 REMARK 3 T TENSOR REMARK 3 T11: 0.5520 T22: 0.5247 REMARK 3 T33: 0.3859 T12: -0.0716 REMARK 3 T13: -0.0793 T23: -0.0034 REMARK 3 L TENSOR REMARK 3 L11: 1.1972 L22: 2.1831 REMARK 3 L33: 1.4419 L12: 0.6884 REMARK 3 L13: -0.7991 L23: 0.1586 REMARK 3 S TENSOR REMARK 3 S11: 0.1544 S12: -0.0639 S13: 0.0916 REMARK 3 S21: 0.3680 S22: -0.3121 S23: -0.1472 REMARK 3 S31: 0.0242 S32: -0.1005 S33: 0.1578 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 314 A 373 REMARK 3 ORIGIN FOR THE GROUP (A): -10.3817 -7.6483 -29.7512 REMARK 3 T TENSOR REMARK 3 T11: 1.2267 T22: 1.0996 REMARK 3 T33: 0.4651 T12: -0.1111 REMARK 3 T13: 0.3175 T23: -0.0980 REMARK 3 L TENSOR REMARK 3 L11: 1.0186 L22: 0.7725 REMARK 3 L33: 1.2788 L12: -0.3481 REMARK 3 L13: 0.9999 L23: -0.4825 REMARK 3 S TENSOR REMARK 3 S11: -0.2059 S12: -0.4709 S13: 0.4524 REMARK 3 S21: -0.5053 S22: -0.3670 S23: -0.4742 REMARK 3 S31: 0.3875 S32: -0.7288 S33: 0.5729 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 374 A 405 REMARK 3 ORIGIN FOR THE GROUP (A): -10.2116 -11.1440 -53.7662 REMARK 3 T TENSOR REMARK 3 T11: 0.7818 T22: 0.8158 REMARK 3 T33: 0.3545 T12: 0.1349 REMARK 3 T13: -0.1333 T23: 0.1118 REMARK 3 L TENSOR REMARK 3 L11: 0.0443 L22: 0.6552 REMARK 3 L33: 1.6995 L12: -0.1185 REMARK 3 L13: -0.1904 L23: 1.0332 REMARK 3 S TENSOR REMARK 3 S11: 0.1473 S12: -0.0601 S13: -0.0030 REMARK 3 S21: -0.1226 S22: 0.2727 S23: -0.2497 REMARK 3 S31: -0.2837 S32: 0.2177 S33: -0.4199 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 406 A 439 REMARK 3 ORIGIN FOR THE GROUP (A): -20.8527 -7.8004 -49.1858 REMARK 3 T TENSOR REMARK 3 T11: 1.0395 T22: 0.5900 REMARK 3 T33: 0.6305 T12: -0.0145 REMARK 3 T13: -0.1898 T23: -0.1491 REMARK 3 L TENSOR REMARK 3 L11: 2.5834 L22: 2.1730 REMARK 3 L33: 2.0729 L12: 0.0466 REMARK 3 L13: -1.1378 L23: 1.8264 REMARK 3 S TENSOR REMARK 3 S11: 0.5056 S12: 0.0951 S13: 0.7606 REMARK 3 S21: 0.6627 S22: -0.5670 S23: 0.4712 REMARK 3 S31: 0.3114 S32: -0.5050 S33: 0.0614 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 440 A 506 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9586 2.7402 -21.0757 REMARK 3 T TENSOR REMARK 3 T11: 0.5386 T22: 0.5150 REMARK 3 T33: 0.4565 T12: -0.0525 REMARK 3 T13: 0.0573 T23: -0.1034 REMARK 3 L TENSOR REMARK 3 L11: 5.6479 L22: 6.3091 REMARK 3 L33: 3.9368 L12: 3.5788 REMARK 3 L13: -4.2199 L23: -1.0848 REMARK 3 S TENSOR REMARK 3 S11: 0.3059 S12: -0.0155 S13: 0.4673 REMARK 3 S21: 0.0618 S22: -0.0249 S23: 0.0970 REMARK 3 S31: -0.0329 S32: -0.1834 S33: -0.2810 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4MX9 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1000082480. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97939 REMARK 200 MONOCHROMATOR : SIDE SCATTERING BENT CUBE-ROOT I REMARK 200 -BEAM SINGLE CRYSTAL; ASYMMETRIC REMARK 200 CUT 4.965 DEGS. REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : AIMLESS 0.1.29 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7664 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 65.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 91.7 REMARK 200 DATA REDUNDANCY : 2.600 REMARK 200 R MERGE (I) : 0.26400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.6 REMARK 200 DATA REDUNDANCY IN SHELL : 2.60 REMARK 200 R MERGE FOR SHELL (I) : 0.01100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 4M97 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN SOLUTION: 25 MM HEPES PH 7.0, REMARK 280 0.5 M NACL, 5% GLYCEROL, 5 MM DTT, 20 MM EGTA, 3MG/ML PROTEIN, REMARK 280 0.2 MM UW1294, 1% DMSO; CRYSTALLIZATION BUFFER: 30% PEG 3350, REMARK 280 0.2 M AMMONIUM CITRATE, 0.1 M BISTRIS PH 5.3, 5 MM DTT, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 36.57050 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL UNIT IS THE SAME AS AU REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 22 REMARK 465 ALA A 23 REMARK 465 ALA A 24 REMARK 465 GLY A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 27 REMARK 465 GLY A 28 REMARK 465 ASP A 29 REMARK 465 LYS A 30 REMARK 465 LEU A 31 REMARK 465 HIS A 32 REMARK 465 ALA A 33 REMARK 465 THR A 34 REMARK 465 PRO A 35 REMARK 465 GLY A 36 REMARK 465 MET A 37 REMARK 465 PHE A 38 REMARK 465 VAL A 39 REMARK 465 GLN A 40 REMARK 465 HIS A 41 REMARK 465 MET A 389 REMARK 465 LYS A 390 REMARK 465 GLY A 391 REMARK 465 GLN A 392 REMARK 465 ASP A 393 REMARK 465 ALA A 394 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 184 CG CD CE NZ REMARK 470 LYS A 186 CG CD CE NZ REMARK 470 LYS A 265 CD CE NZ REMARK 470 LYS A 274 CG CD CE NZ REMARK 470 LYS A 388 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 88 OH TYR A 123 2.01 REMARK 500 O SER A 438 O HOH A 720 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 61 -10.96 73.40 REMARK 500 ASP A 119 -166.91 -122.38 REMARK 500 ARG A 172 -34.07 82.07 REMARK 500 ILE A 315 106.02 -59.27 REMARK 500 SER A 316 68.15 -103.14 REMARK 500 ASP A 318 109.98 -167.17 REMARK 500 MET A 387 125.03 -24.16 REMARK 500 MET A 396 65.25 -102.40 REMARK 500 VAL A 413 34.09 -68.12 REMARK 500 ASP A 414 -110.88 50.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 2E8 A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4M97 RELATED DB: PDB REMARK 900 NCCDPK1 APO DBREF 4MX9 A 22 506 UNP F0V9W9 F0V9W9_NEOCL 22 506 SEQRES 1 A 485 GLY ALA ALA GLY GLY ALA GLY ASP LYS LEU HIS ALA THR SEQRES 2 A 485 PRO GLY MET PHE VAL GLN HIS SER THR ALA ILE PHE SER SEQRES 3 A 485 ASP ARG TYR LYS GLY GLN ARG VAL LEU GLY LYS GLY SER SEQRES 4 A 485 PHE GLY GLU VAL ILE LEU CYS LYS ASP LYS ILE THR GLY SEQRES 5 A 485 GLN GLU CYS ALA VAL LYS VAL ILE SER LYS ARG GLN VAL SEQRES 6 A 485 LYS GLN LYS THR ASP LYS GLU SER LEU LEU ARG GLU VAL SEQRES 7 A 485 GLN LEU LEU LYS GLN LEU ASP HIS PRO ASN ILE MET LYS SEQRES 8 A 485 LEU TYR GLU PHE PHE GLU ASP LYS GLY TYR TYR TYR LEU SEQRES 9 A 485 VAL GLY GLU VAL TYR THR GLY GLY GLU LEU PHE ASP GLU SEQRES 10 A 485 ILE ILE SER ARG LYS ARG PHE SER GLU VAL ASP ALA ALA SEQRES 11 A 485 ARG ILE ILE ARG GLN VAL LEU SER GLY ILE THR TYR MET SEQRES 12 A 485 HIS LYS ASN LYS ILE VAL HIS ARG ASP LEU LYS PRO GLU SEQRES 13 A 485 ASN LEU LEU LEU GLU SER LYS SER LYS ASP ALA ASN ILE SEQRES 14 A 485 ARG ILE ILE ASP PHE GLY LEU SER THR HIS PHE GLU ALA SEQRES 15 A 485 SER LYS LYS MET LYS ASP LYS ILE GLY THR ALA TYR TYR SEQRES 16 A 485 ILE ALA PRO GLU VAL LEU HIS GLY THR TYR ASP GLU LYS SEQRES 17 A 485 CYS ASP VAL TRP SER THR GLY VAL ILE LEU TYR ILE LEU SEQRES 18 A 485 LEU SER GLY CYS PRO PRO PHE ASN GLY ALA ASN GLU TYR SEQRES 19 A 485 ASP ILE LEU LYS LYS VAL GLU LYS GLY LYS TYR THR PHE SEQRES 20 A 485 GLU LEU PRO GLN TRP LYS LYS VAL SER GLU SER ALA LYS SEQRES 21 A 485 ASP LEU ILE ARG LYS MET LEU THR TYR VAL PRO SER MET SEQRES 22 A 485 ARG ILE SER ALA ARG ASP ALA LEU ASP HIS GLU TRP ILE SEQRES 23 A 485 GLN THR TYR THR LYS GLU GLN ILE SER VAL ASP VAL PRO SEQRES 24 A 485 SER LEU ASP ASN ALA ILE LEU ASN ILE ARG GLN PHE GLN SEQRES 25 A 485 GLY THR GLN LYS LEU ALA GLN ALA ALA LEU LEU TYR MET SEQRES 26 A 485 GLY SER LYS LEU THR SER GLN ASP GLU THR LYS GLU LEU SEQRES 27 A 485 THR ALA ILE PHE HIS LYS MET ASP LYS ASN GLY ASP GLY SEQRES 28 A 485 GLN LEU ASP ARG ALA GLU LEU ILE GLU GLY TYR LYS GLU SEQRES 29 A 485 LEU MET LYS MET LYS GLY GLN ASP ALA SER MET LEU ASP SEQRES 30 A 485 ALA SER ALA VAL GLU HIS GLU VAL ASP GLN VAL LEU ASP SEQRES 31 A 485 ALA VAL ASP PHE ASP LYS ASN GLY TYR ILE GLU TYR SER SEQRES 32 A 485 GLU PHE VAL THR VAL ALA MET ASP ARG LYS THR LEU LEU SEQRES 33 A 485 SER ARG GLU ARG LEU GLU ARG ALA PHE ARG MET PHE ASP SEQRES 34 A 485 SER ASP ASN SER GLY LYS ILE SER SER SER GLU LEU ALA SEQRES 35 A 485 THR ILE PHE GLY VAL SER ASP VAL ASP SER GLU THR TRP SEQRES 36 A 485 LYS ASN VAL LEU ALA GLU VAL ASP LYS ASN ASN ASP GLY SEQRES 37 A 485 GLU VAL ASP PHE ASP GLU PHE GLN GLN MET LEU LEU LYS SEQRES 38 A 485 LEU CYS GLY ASN HET 2E8 A 601 31 HETNAM 2E8 3-(6-ETHOXYNAPHTHALEN-2-YL)-1-[(1-METHYLPIPERIDIN-4- HETNAM 2 2E8 YL)METHYL]-1H-PYRAZOLO[3,4-D]PYRIMIDIN-4-AMINE FORMUL 2 2E8 C24 H28 N6 O FORMUL 3 HOH *24(H2 O) HELIX 1 1 ILE A 45 ARG A 49 1 5 HELIX 2 2 ASP A 91 LYS A 103 1 13 HELIX 3 3 GLU A 134 ILE A 140 1 7 HELIX 4 4 SER A 146 ASN A 167 1 22 HELIX 5 5 LYS A 175 GLU A 177 5 3 HELIX 6 6 GLY A 196 HIS A 200 5 5 HELIX 7 7 LYS A 206 ILE A 211 1 6 HELIX 8 8 ALA A 218 GLY A 224 1 7 HELIX 9 9 LYS A 229 GLY A 245 1 17 HELIX 10 10 ASN A 253 GLY A 264 1 12 HELIX 11 11 LEU A 270 LYS A 274 5 5 HELIX 12 12 SER A 277 LEU A 288 1 12 HELIX 13 13 VAL A 291 ARG A 295 5 5 HELIX 14 14 SER A 297 ASP A 303 1 7 HELIX 15 15 HIS A 304 THR A 311 1 8 HELIX 16 16 LEU A 322 ASP A 367 1 46 HELIX 17 17 ASP A 375 MET A 387 1 13 HELIX 18 18 ASP A 398 VAL A 413 1 16 HELIX 19 19 TYR A 423 ASP A 450 1 28 HELIX 20 20 SER A 459 SER A 469 1 11 HELIX 21 21 ASP A 472 ASP A 484 1 13 HELIX 22 22 PHE A 493 LEU A 503 1 11 SHEET 1 A 5 TYR A 50 GLY A 59 0 SHEET 2 A 5 GLY A 62 ASP A 69 -1 O LEU A 66 N GLN A 53 SHEET 3 A 5 GLU A 75 SER A 82 -1 O CYS A 76 N CYS A 67 SHEET 4 A 5 TYR A 122 GLY A 127 -1 O GLY A 127 N ALA A 77 SHEET 5 A 5 LEU A 113 GLU A 118 -1 N TYR A 114 O VAL A 126 SHEET 1 B 2 LEU A 179 LEU A 181 0 SHEET 2 B 2 ILE A 190 ILE A 192 -1 O ARG A 191 N LEU A 180 SHEET 1 C 2 GLN A 373 LEU A 374 0 SHEET 2 C 2 ILE A 421 GLU A 422 -1 O ILE A 421 N LEU A 374 SHEET 1 D 2 LYS A 456 SER A 458 0 SHEET 2 D 2 GLU A 490 ASP A 492 -1 O VAL A 491 N ILE A 457 SITE 1 AC1 13 GLY A 59 VAL A 64 ALA A 77 LYS A 79 SITE 2 AC1 13 MET A 111 LEU A 125 GLU A 128 VAL A 129 SITE 3 AC1 13 TYR A 130 GLU A 134 ASP A 194 LEU A 197 SITE 4 AC1 13 HOH A 722 CRYST1 48.380 73.141 66.270 90.00 99.84 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020670 0.000000 0.003585 0.00000 SCALE2 0.000000 0.013672 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015315 0.00000