HEADER TRANSFERASE 27-SEP-13 4MYO TITLE CRYSTAL STRUCTURE OF STREPTOGRAMIN GROUP A ANTIBIOTIC TITLE 2 ACETYLTRANSFERASE VATA FROM STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: VIRGINIAMYCIN A ACETYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 EC: 2.3.1.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: BM3093; SOURCE 5 GENE: VAT; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS STRUCTURAL GENOMICS, ANTIBIOTIC RESISTANCE, CENTER FOR STRUCTURAL KEYWDS 2 GENOMICS OF INFECTIOUS DISEASES, CSGID, NIAID, NATIONAL INSTITUTE OF KEYWDS 3 ALLERGY AND INFECTIOUS DISEASES, LEFT-HANDED BETA HELIX DOMAIN, KEYWDS 4 XENOBIOTIC ACYLTRANSFERASE (XAT) FAMILY, HEXAPEPTIDE REPEAT KEYWDS 5 ACYLTRANSFERASE, TRANSFERASE, STREPTOGRAMIN GROUP A ANTIBIOTICS, KEYWDS 6 STREPTOGRAMIN A, VIRGINIAMYCIN, DALFOPRISTIN, ACETYL COENZYME A, KEYWDS 7 COENZYME A, INTRACELLULAR EXPDTA X-RAY DIFFRACTION AUTHOR P.J.STOGIOS,G.MINASOV,A.DONG,E.EVDOKIMOVA,V.YIM,M.KRISHNAMOORTHY,R.DI AUTHOR 2 LEO,P.COURVALIN,A.SAVCHENKO,W.F.ANDERSON,CENTER FOR STRUCTURAL AUTHOR 3 GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 4 20-SEP-23 4MYO 1 REMARK SEQADV LINK REVDAT 3 24-DEC-14 4MYO 1 JRNL REVDAT 2 24-SEP-14 4MYO 1 JRNL REVDAT 1 16-OCT-13 4MYO 0 SPRSDE 16-OCT-13 4MYO 4E8L JRNL AUTH P.J.STOGIOS,M.L.KUHN,E.EVDOKIMOVA,P.COURVALIN,W.F.ANDERSON, JRNL AUTH 2 A.SAVCHENKO JRNL TITL POTENTIAL FOR REDUCTION OF STREPTOGRAMIN A RESISTANCE JRNL TITL 2 REVEALED BY STRUCTURAL ANALYSIS OF ACETYLTRANSFERASE VATA. JRNL REF ANTIMICROB.AGENTS CHEMOTHER. V. 58 7083 2014 JRNL REFN ISSN 0066-4804 JRNL PMID 25223995 JRNL DOI 10.1128/AAC.03743-14 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.3_1479) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.67 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 22953 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1148 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 24.6668 - 5.3765 1.00 2858 151 0.1853 0.2295 REMARK 3 2 5.3765 - 4.2747 1.00 2758 146 0.1461 0.2090 REMARK 3 3 4.2747 - 3.7365 1.00 2741 143 0.1607 0.2314 REMARK 3 4 3.7365 - 3.3958 1.00 2722 143 0.1831 0.2645 REMARK 3 5 3.3958 - 3.1529 1.00 2685 142 0.2274 0.2754 REMARK 3 6 3.1529 - 2.9674 1.00 2686 142 0.2355 0.3098 REMARK 3 7 2.9674 - 2.8190 1.00 2720 142 0.2528 0.3372 REMARK 3 8 2.8190 - 2.6964 0.98 2635 139 0.2492 0.3111 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.70 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 5234 REMARK 3 ANGLE : 0.691 7084 REMARK 3 CHIRALITY : 0.048 751 REMARK 3 PLANARITY : 0.003 911 REMARK 3 DIHEDRAL : 10.774 1963 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 6:84 REMARK 3 ORIGIN FOR THE GROUP (A): -10.4642 31.8536 -11.2982 REMARK 3 T TENSOR REMARK 3 T11: 0.3843 T22: 0.1926 REMARK 3 T33: 0.3184 T12: 0.0223 REMARK 3 T13: 0.0533 T23: -0.0647 REMARK 3 L TENSOR REMARK 3 L11: 6.1609 L22: 5.6068 REMARK 3 L33: 8.7297 L12: -0.7735 REMARK 3 L13: 4.3181 L23: -2.2693 REMARK 3 S TENSOR REMARK 3 S11: -0.0243 S12: 0.0579 S13: 0.3003 REMARK 3 S21: 0.0972 S22: 0.1651 S23: -0.4574 REMARK 3 S31: -0.0875 S32: 0.2966 S33: -0.1062 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 85:113 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0017 41.8553 -39.5095 REMARK 3 T TENSOR REMARK 3 T11: 0.5578 T22: 0.2929 REMARK 3 T33: 0.3786 T12: 0.0010 REMARK 3 T13: 0.0017 T23: 0.0684 REMARK 3 L TENSOR REMARK 3 L11: 5.9531 L22: 8.6625 REMARK 3 L33: 4.2519 L12: -4.5009 REMARK 3 L13: -0.1688 L23: 3.4788 REMARK 3 S TENSOR REMARK 3 S11: -0.3524 S12: -0.0438 S13: 0.7635 REMARK 3 S21: 0.0832 S22: 0.4372 S23: -0.7806 REMARK 3 S31: -0.4174 S32: 0.2271 S33: -0.1396 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 114:216 REMARK 3 ORIGIN FOR THE GROUP (A): -26.3133 30.3033 -3.1688 REMARK 3 T TENSOR REMARK 3 T11: 0.5309 T22: 0.3544 REMARK 3 T33: 0.3107 T12: 0.1017 REMARK 3 T13: 0.0808 T23: 0.0263 REMARK 3 L TENSOR REMARK 3 L11: 1.9523 L22: 3.1324 REMARK 3 L33: 3.6543 L12: 0.1914 REMARK 3 L13: 0.4301 L23: 1.0015 REMARK 3 S TENSOR REMARK 3 S11: -0.0757 S12: -0.3689 S13: 0.2201 REMARK 3 S21: 0.6434 S22: 0.0529 S23: 0.2094 REMARK 3 S31: -0.3529 S32: -0.5898 S33: 0.0261 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN B AND RESID 6:84 REMARK 3 ORIGIN FOR THE GROUP (A): -12.1233 22.3620 -42.8110 REMARK 3 T TENSOR REMARK 3 T11: 0.3538 T22: 0.2720 REMARK 3 T33: 0.3650 T12: 0.0973 REMARK 3 T13: 0.0279 T23: 0.0384 REMARK 3 L TENSOR REMARK 3 L11: 6.8511 L22: 5.9723 REMARK 3 L33: 6.8254 L12: 1.9211 REMARK 3 L13: 0.5808 L23: -0.3180 REMARK 3 S TENSOR REMARK 3 S11: 0.0703 S12: 0.3318 S13: -0.2671 REMARK 3 S21: -0.4136 S22: 0.0257 S23: -0.4894 REMARK 3 S31: 0.5471 S32: 0.4579 S33: -0.0860 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN B AND RESID 85:113 REMARK 3 ORIGIN FOR THE GROUP (A): -18.8566 -7.3249 -36.6874 REMARK 3 T TENSOR REMARK 3 T11: 0.7796 T22: 0.4112 REMARK 3 T33: 0.3136 T12: -0.0609 REMARK 3 T13: -0.0570 T23: 0.0026 REMARK 3 L TENSOR REMARK 3 L11: 5.2434 L22: 0.8985 REMARK 3 L33: 6.5054 L12: 2.1204 REMARK 3 L13: 1.4812 L23: 1.1428 REMARK 3 S TENSOR REMARK 3 S11: -0.1078 S12: 0.6728 S13: 0.1587 REMARK 3 S21: -0.0952 S22: 0.1876 S23: 0.2385 REMARK 3 S31: -0.4602 S32: 0.3559 S33: -0.1112 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN B AND RESID 114:217 REMARK 3 ORIGIN FOR THE GROUP (A): -28.1562 30.3788 -43.9193 REMARK 3 T TENSOR REMARK 3 T11: 0.3904 T22: 0.2732 REMARK 3 T33: 0.2729 T12: 0.0203 REMARK 3 T13: -0.0728 T23: 0.0157 REMARK 3 L TENSOR REMARK 3 L11: 1.7143 L22: 7.1201 REMARK 3 L33: 4.2309 L12: -0.7349 REMARK 3 L13: 0.2824 L23: -3.9408 REMARK 3 S TENSOR REMARK 3 S11: -0.0056 S12: 0.2117 S13: 0.0565 REMARK 3 S21: -0.5623 S22: 0.1357 S23: 0.4842 REMARK 3 S31: -0.1524 S32: -0.3354 S33: -0.1235 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN C AND RESID 7:84 REMARK 3 ORIGIN FOR THE GROUP (A): -11.4139 0.0014 -18.5673 REMARK 3 T TENSOR REMARK 3 T11: 0.4620 T22: 0.2410 REMARK 3 T33: 0.2748 T12: 0.0152 REMARK 3 T13: -0.1061 T23: 0.0245 REMARK 3 L TENSOR REMARK 3 L11: 5.7888 L22: 5.0031 REMARK 3 L33: 6.0380 L12: -1.7893 REMARK 3 L13: -3.6904 L23: 1.8244 REMARK 3 S TENSOR REMARK 3 S11: -0.0391 S12: -0.2643 S13: 0.0854 REMARK 3 S21: 0.4836 S22: 0.2102 S23: -0.4778 REMARK 3 S31: 0.1983 S32: 0.3392 S33: -0.1724 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN C AND RESID 85:113 REMARK 3 ORIGIN FOR THE GROUP (A): -16.9610 19.9664 4.3221 REMARK 3 T TENSOR REMARK 3 T11: 0.8211 T22: 0.3479 REMARK 3 T33: 0.4378 T12: 0.1162 REMARK 3 T13: 0.0406 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 2.5572 L22: 5.5047 REMARK 3 L33: 3.4599 L12: 3.6377 REMARK 3 L13: -2.9058 L23: -4.3139 REMARK 3 S TENSOR REMARK 3 S11: -0.3818 S12: 0.1032 S13: -0.9472 REMARK 3 S21: -0.1995 S22: 0.1188 S23: -0.5211 REMARK 3 S31: 0.4144 S32: -0.0217 S33: 0.2520 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN C AND RESID 114:217 REMARK 3 ORIGIN FOR THE GROUP (A): -27.7217 -5.4671 -23.5795 REMARK 3 T TENSOR REMARK 3 T11: 0.5523 T22: 0.3509 REMARK 3 T33: 0.3505 T12: -0.1088 REMARK 3 T13: -0.0623 T23: 0.0677 REMARK 3 L TENSOR REMARK 3 L11: 2.6420 L22: 6.8130 REMARK 3 L33: 2.8251 L12: -0.4217 REMARK 3 L13: 0.0054 L23: 1.5506 REMARK 3 S TENSOR REMARK 3 S11: 0.0450 S12: 0.1136 S13: -0.3513 REMARK 3 S21: 0.0072 S22: 0.1256 S23: 0.5694 REMARK 3 S31: 0.9534 S32: -0.3076 S33: -0.1203 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4MYO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082531. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 HF REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54178 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU SATURN A200 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22987 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.696 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 6.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07800 REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.75 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.36800 REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.013 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1MR7 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M POTASSIUM/SODIUM TARTRATE, 2 M REMARK 280 AMMONIUM SULFATE, 0.1 M TRI-SODIUM CITRATE PH 5.6, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.45450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.45450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 45.91800 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 92.01850 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 45.91800 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 92.01850 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.45450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 45.91800 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 92.01850 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 48.45450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 45.91800 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 92.01850 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 9940 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -164.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 21590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 55970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -338.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -96.90900 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH C 429 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 217 REMARK 465 ASP A 218 REMARK 465 THR A 219 REMARK 465 ASP B 218 REMARK 465 THR B 219 REMARK 465 GLY C 6 REMARK 465 ASP C 218 REMARK 465 THR C 219 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 40 -6.51 67.99 REMARK 500 ARG A 100 -129.43 55.11 REMARK 500 PRO A 114 77.94 -68.48 REMARK 500 LYS A 214 98.89 -63.67 REMARK 500 ASN B 34 17.90 58.66 REMARK 500 TYR B 40 -9.63 66.33 REMARK 500 LYS B 46 -73.38 -83.26 REMARK 500 ASN B 83 -72.87 -53.70 REMARK 500 ARG B 100 -139.03 52.55 REMARK 500 GLU B 148 14.51 59.85 REMARK 500 TYR C 40 -11.40 67.71 REMARK 500 ARG C 100 -135.24 49.66 REMARK 500 ASP C 205 88.06 -68.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 301 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 164 O REMARK 620 2 HOH A 432 O 86.1 REMARK 620 3 ASN B 164 O 94.4 173.7 REMARK 620 4 HOH B 429 O 95.1 86.8 87.0 REMARK 620 5 HOH B 430 O 173.0 97.5 81.4 79.1 REMARK 620 6 ASN C 164 O 91.4 97.2 89.0 172.6 94.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 305 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HUR RELATED DB: PDB REMARK 900 RELATED ID: 4HUS RELATED DB: PDB REMARK 900 RELATED ID: CSGID-IDP91546 RELATED DB: TARGETTRACK DBREF 4MYO A 7 219 UNP P26839 VATA_STAAU 7 219 DBREF 4MYO B 7 219 UNP P26839 VATA_STAAU 7 219 DBREF 4MYO C 7 219 UNP P26839 VATA_STAAU 7 219 SEQADV 4MYO GLY A 6 UNP P26839 EXPRESSION TAG SEQADV 4MYO GLY B 6 UNP P26839 EXPRESSION TAG SEQADV 4MYO GLY C 6 UNP P26839 EXPRESSION TAG SEQRES 1 A 214 GLY HIS GLY PRO ASP PRO GLU ASN ILE LEU PRO ILE LYS SEQRES 2 A 214 GLY ASN ARG ASN LEU GLN PHE ILE LYS PRO THR ILE THR SEQRES 3 A 214 ASN GLU ASN ILE LEU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 A 214 SER LYS ARG GLY GLU SER PHE GLU ASP GLN VAL LEU TYR SEQRES 5 A 214 HIS TYR GLU VAL ILE GLY ASP LYS LEU ILE ILE GLY ARG SEQRES 6 A 214 PHE CYS SER ILE GLY PRO GLY THR THR PHE ILE MET ASN SEQRES 7 A 214 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 A 214 HIS LEU PHE ARG MET GLY TRP GLU LYS TYR MET PRO SER SEQRES 9 A 214 LEU LYS ASP LEU PRO LEU LYS GLY ASP ILE GLU ILE GLY SEQRES 10 A 214 ASN ASP VAL TRP ILE GLY ARG ASP VAL THR ILE MET PRO SEQRES 11 A 214 GLY VAL LYS ILE GLY ASP GLY ALA ILE ILE ALA ALA GLU SEQRES 12 A 214 ALA VAL VAL THR LYS ASN VAL ALA PRO TYR SER ILE VAL SEQRES 13 A 214 GLY GLY ASN PRO LEU LYS PHE ILE ARG LYS ARG PHE SER SEQRES 14 A 214 ASP GLY VAL ILE GLU GLU TRP LEU ALA LEU GLN TRP TRP SEQRES 15 A 214 ASN LEU ASP MET LYS ILE ILE ASN GLU ASN LEU PRO PHE SEQRES 16 A 214 ILE ILE ASN GLY ASP ILE GLU MET LEU LYS ARG LYS ARG SEQRES 17 A 214 LYS LEU LEU ASP ASP THR SEQRES 1 B 214 GLY HIS GLY PRO ASP PRO GLU ASN ILE LEU PRO ILE LYS SEQRES 2 B 214 GLY ASN ARG ASN LEU GLN PHE ILE LYS PRO THR ILE THR SEQRES 3 B 214 ASN GLU ASN ILE LEU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 B 214 SER LYS ARG GLY GLU SER PHE GLU ASP GLN VAL LEU TYR SEQRES 5 B 214 HIS TYR GLU VAL ILE GLY ASP LYS LEU ILE ILE GLY ARG SEQRES 6 B 214 PHE CYS SER ILE GLY PRO GLY THR THR PHE ILE MET ASN SEQRES 7 B 214 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 B 214 HIS LEU PHE ARG MET GLY TRP GLU LYS TYR MET PRO SER SEQRES 9 B 214 LEU LYS ASP LEU PRO LEU LYS GLY ASP ILE GLU ILE GLY SEQRES 10 B 214 ASN ASP VAL TRP ILE GLY ARG ASP VAL THR ILE MET PRO SEQRES 11 B 214 GLY VAL LYS ILE GLY ASP GLY ALA ILE ILE ALA ALA GLU SEQRES 12 B 214 ALA VAL VAL THR LYS ASN VAL ALA PRO TYR SER ILE VAL SEQRES 13 B 214 GLY GLY ASN PRO LEU LYS PHE ILE ARG LYS ARG PHE SER SEQRES 14 B 214 ASP GLY VAL ILE GLU GLU TRP LEU ALA LEU GLN TRP TRP SEQRES 15 B 214 ASN LEU ASP MET LYS ILE ILE ASN GLU ASN LEU PRO PHE SEQRES 16 B 214 ILE ILE ASN GLY ASP ILE GLU MET LEU LYS ARG LYS ARG SEQRES 17 B 214 LYS LEU LEU ASP ASP THR SEQRES 1 C 214 GLY HIS GLY PRO ASP PRO GLU ASN ILE LEU PRO ILE LYS SEQRES 2 C 214 GLY ASN ARG ASN LEU GLN PHE ILE LYS PRO THR ILE THR SEQRES 3 C 214 ASN GLU ASN ILE LEU VAL GLY GLU TYR SER TYR TYR ASP SEQRES 4 C 214 SER LYS ARG GLY GLU SER PHE GLU ASP GLN VAL LEU TYR SEQRES 5 C 214 HIS TYR GLU VAL ILE GLY ASP LYS LEU ILE ILE GLY ARG SEQRES 6 C 214 PHE CYS SER ILE GLY PRO GLY THR THR PHE ILE MET ASN SEQRES 7 C 214 GLY ALA ASN HIS ARG MET ASP GLY SER THR TYR PRO PHE SEQRES 8 C 214 HIS LEU PHE ARG MET GLY TRP GLU LYS TYR MET PRO SER SEQRES 9 C 214 LEU LYS ASP LEU PRO LEU LYS GLY ASP ILE GLU ILE GLY SEQRES 10 C 214 ASN ASP VAL TRP ILE GLY ARG ASP VAL THR ILE MET PRO SEQRES 11 C 214 GLY VAL LYS ILE GLY ASP GLY ALA ILE ILE ALA ALA GLU SEQRES 12 C 214 ALA VAL VAL THR LYS ASN VAL ALA PRO TYR SER ILE VAL SEQRES 13 C 214 GLY GLY ASN PRO LEU LYS PHE ILE ARG LYS ARG PHE SER SEQRES 14 C 214 ASP GLY VAL ILE GLU GLU TRP LEU ALA LEU GLN TRP TRP SEQRES 15 C 214 ASN LEU ASP MET LYS ILE ILE ASN GLU ASN LEU PRO PHE SEQRES 16 C 214 ILE ILE ASN GLY ASP ILE GLU MET LEU LYS ARG LYS ARG SEQRES 17 C 214 LYS LEU LEU ASP ASP THR HET MG A 301 1 HET CL A 302 1 HET CL A 303 1 HET CL A 304 1 HET CL A 305 1 HET CL B 301 1 HET CL B 302 1 HET CL B 303 1 HET CL B 304 1 HET SO4 B 305 5 HET CL C 301 1 HET CL C 302 1 HET CL C 303 1 HET SO4 C 304 5 HET SO4 C 305 5 HETNAM MG MAGNESIUM ION HETNAM CL CHLORIDE ION HETNAM SO4 SULFATE ION FORMUL 4 MG MG 2+ FORMUL 5 CL 11(CL 1-) FORMUL 13 SO4 3(O4 S 2-) FORMUL 19 HOH *115(H2 O) HELIX 1 1 LYS A 27 ILE A 30 5 4 HELIX 2 2 SER A 50 ASP A 53 5 4 HELIX 3 3 ASN A 83 ASN A 86 5 4 HELIX 4 4 PRO A 95 ARG A 100 5 6 HELIX 5 5 TRP A 103 MET A 107 5 5 HELIX 6 6 SER A 174 GLN A 185 1 12 HELIX 7 7 TRP A 186 LEU A 189 5 4 HELIX 8 8 ASP A 190 GLU A 196 1 7 HELIX 9 9 ASN A 197 ASN A 203 1 7 HELIX 10 10 ASP A 205 ARG A 213 1 9 HELIX 11 11 LYS B 27 ILE B 30 5 4 HELIX 12 12 SER B 50 ASP B 53 5 4 HELIX 13 13 PRO B 95 ARG B 100 5 6 HELIX 14 14 GLY B 102 MET B 107 5 6 HELIX 15 15 SER B 174 GLN B 185 1 12 HELIX 16 16 TRP B 186 LEU B 189 5 4 HELIX 17 17 ASP B 190 GLY B 204 1 15 HELIX 18 18 ASP B 205 LEU B 216 1 12 HELIX 19 19 LYS C 27 ILE C 30 5 4 HELIX 20 20 SER C 50 ASP C 53 5 4 HELIX 21 21 PRO C 95 ARG C 100 1 6 HELIX 22 22 TRP C 103 MET C 107 5 5 HELIX 23 23 SER C 174 GLN C 185 1 12 HELIX 24 24 TRP C 186 LEU C 189 5 4 HELIX 25 25 ASP C 190 ASN C 203 1 14 HELIX 26 26 ILE C 206 LEU C 215 1 10 SHEET 1 A 7 LEU A 23 PHE A 25 0 SHEET 2 A 7 TYR A 42 ASP A 44 -1 O TYR A 43 N GLN A 24 SHEET 3 A 7 SER A 73 ILE A 74 1 O ILE A 74 N ASP A 44 SHEET 4 A 7 TRP A 126 ILE A 127 1 O ILE A 127 N SER A 73 SHEET 5 A 7 ILE A 144 ILE A 145 1 O ILE A 145 N TRP A 126 SHEET 6 A 7 SER A 159 GLY A 162 1 O SER A 159 N ILE A 144 SHEET 7 A 7 LYS A 167 LYS A 171 -1 O ARG A 170 N ILE A 160 SHEET 1 B 4 ILE A 35 VAL A 37 0 SHEET 2 B 4 LEU A 66 ILE A 68 1 O ILE A 68 N LEU A 36 SHEET 3 B 4 ILE A 119 ILE A 121 1 O ILE A 121 N ILE A 67 SHEET 4 B 4 LYS A 138 ILE A 139 1 O ILE A 139 N GLU A 120 SHEET 1 C 4 VAL A 55 LEU A 56 0 SHEET 2 C 4 THR A 79 ILE A 81 1 O PHE A 80 N LEU A 56 SHEET 3 C 4 THR A 132 ILE A 133 1 O ILE A 133 N THR A 79 SHEET 4 C 4 VAL A 150 VAL A 151 1 O VAL A 151 N THR A 132 SHEET 1 D 7 LEU B 23 PHE B 25 0 SHEET 2 D 7 TYR B 42 ASP B 44 -1 O TYR B 43 N GLN B 24 SHEET 3 D 7 SER B 73 ILE B 74 1 O ILE B 74 N ASP B 44 SHEET 4 D 7 TRP B 126 ILE B 127 1 O ILE B 127 N SER B 73 SHEET 5 D 7 ILE B 144 ILE B 145 1 O ILE B 145 N TRP B 126 SHEET 6 D 7 SER B 159 GLY B 162 1 O SER B 159 N ILE B 144 SHEET 7 D 7 LYS B 167 LYS B 171 -1 O ARG B 170 N ILE B 160 SHEET 1 E 4 ILE B 35 VAL B 37 0 SHEET 2 E 4 LEU B 66 ILE B 68 1 O ILE B 68 N LEU B 36 SHEET 3 E 4 ILE B 119 ILE B 121 1 O ILE B 121 N ILE B 67 SHEET 4 E 4 LYS B 138 ILE B 139 1 O ILE B 139 N GLU B 120 SHEET 1 F 4 VAL B 55 LEU B 56 0 SHEET 2 F 4 THR B 79 ILE B 81 1 O PHE B 80 N LEU B 56 SHEET 3 F 4 THR B 132 ILE B 133 1 O ILE B 133 N ILE B 81 SHEET 4 F 4 VAL B 150 VAL B 151 1 O VAL B 151 N THR B 132 SHEET 1 G 7 LEU C 23 PHE C 25 0 SHEET 2 G 7 TYR C 42 ASP C 44 -1 O TYR C 43 N GLN C 24 SHEET 3 G 7 SER C 73 ILE C 74 1 O ILE C 74 N ASP C 44 SHEET 4 G 7 TRP C 126 ILE C 127 1 O ILE C 127 N SER C 73 SHEET 5 G 7 ILE C 144 ILE C 145 1 O ILE C 145 N TRP C 126 SHEET 6 G 7 SER C 159 GLY C 162 1 O VAL C 161 N ILE C 144 SHEET 7 G 7 LYS C 167 LYS C 171 -1 O ARG C 170 N ILE C 160 SHEET 1 H 4 ILE C 35 VAL C 37 0 SHEET 2 H 4 LEU C 66 ILE C 68 1 O LEU C 66 N LEU C 36 SHEET 3 H 4 ILE C 119 ILE C 121 1 O ILE C 121 N ILE C 67 SHEET 4 H 4 LYS C 138 ILE C 139 1 O ILE C 139 N GLU C 120 SHEET 1 I 4 VAL C 55 LEU C 56 0 SHEET 2 I 4 THR C 79 ILE C 81 1 O PHE C 80 N LEU C 56 SHEET 3 I 4 THR C 132 ILE C 133 1 O ILE C 133 N THR C 79 SHEET 4 I 4 VAL C 150 VAL C 151 1 O VAL C 151 N THR C 132 LINK O ASN A 164 MG MG A 301 1555 1555 2.18 LINK MG MG A 301 O HOH A 432 1555 1555 2.09 LINK MG MG A 301 O ASN B 164 1555 1555 2.20 LINK MG MG A 301 O HOH B 429 1555 1555 2.11 LINK MG MG A 301 O HOH B 430 1555 1555 2.10 LINK MG MG A 301 O ASN C 164 1555 1555 2.21 CISPEP 1 ASN A 164 PRO A 165 0 -1.89 CISPEP 2 ASN B 164 PRO B 165 0 -0.69 CISPEP 3 ASN C 164 PRO C 165 0 -1.80 SITE 1 AC1 6 ASN A 164 HOH A 432 ASN B 164 HOH B 429 SITE 2 AC1 6 HOH B 430 ASN C 164 SITE 1 AC2 2 LYS A 153 PHE A 168 SITE 1 AC3 1 ASN A 203 SITE 1 AC4 1 GLU A 60 SITE 1 AC5 2 ASP A 118 LYS A 138 SITE 1 AC6 1 PHE B 168 SITE 1 AC7 1 ARG B 88 SITE 1 AC8 4 LYS B 27 GLY B 38 GLU B 39 ARG B 70 SITE 1 AC9 1 ARG C 100 SITE 1 BC1 4 LYS C 27 GLY C 38 GLU C 39 ARG C 70 SITE 1 BC2 2 LYS C 153 PHE C 168 CRYST1 91.836 184.037 96.909 90.00 90.00 90.00 C 2 2 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010889 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005434 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010319 0.00000