HEADER RNA BINDING PROTEIN/RNA 02-OCT-13 4N0T TITLE CORE STRUCTURE OF THE U6 SMALL NUCLEAR RIBONUCLEOPROTEIN AT 1.7 TITLE 2 ANGSTROM RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: U4/U6 SNRNA-ASSOCIATED-SPLICING FACTOR PRP24; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: U4/U6 SNRNP PROTEIN; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: U6 SNRNA; COMPND 8 CHAIN: B; COMPND 9 ENGINEERED: YES; COMPND 10 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: S288C; SOURCE 6 GENE: PRP24, YM8156.10C, YMR268C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) STAR PLYSS; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET3A; SOURCE 12 MOL_ID: 2; SOURCE 13 SYNTHETIC: YES; SOURCE 14 OTHER_DETAILS: IN VITRO TRANSCRIPTION USING A CLONED PLASMID SOURCE 15 TEMPLATE KEYWDS SPLICEOSOMAL RIBONUCLEOPROTEIN COMPLEX, ANNEALING U6 AND U4 SNRNA, KEYWDS 2 NUCLEUS, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR E.J.MONTEMAYOR,E.C.CURRAN,H.LIAO,K.L.ANDREWS,C.N.TREBA,S.E.BUTCHER, AUTHOR 2 D.A.BROW REVDAT 4 20-SEP-23 4N0T 1 REMARK SEQADV REVDAT 3 02-JUL-14 4N0T 1 JRNL REVDAT 2 21-MAY-14 4N0T 1 TITLE REVDAT 1 14-MAY-14 4N0T 0 JRNL AUTH E.J.MONTEMAYOR,E.C.CURRAN,H.H.LIAO,K.L.ANDREWS,C.N.TREBA, JRNL AUTH 2 S.E.BUTCHER,D.A.BROW JRNL TITL CORE STRUCTURE OF THE U6 SMALL NUCLEAR RIBONUCLEOPROTEIN AT JRNL TITL 2 1.7- ANGSTROM RESOLUTION. JRNL REF NAT.STRUCT.MOL.BIOL. V. 21 544 2014 JRNL REFN ISSN 1545-9993 JRNL PMID 24837192 JRNL DOI 10.1038/NSMB.2832 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.25 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 145765 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.220 REMARK 3 FREE R VALUE TEST SET COUNT : 4690 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.2536 - 5.2564 0.98 4588 161 0.1700 0.1887 REMARK 3 2 5.2564 - 4.1776 1.00 4737 154 0.1422 0.1456 REMARK 3 3 4.1776 - 3.6511 1.00 4703 163 0.1463 0.1556 REMARK 3 4 3.6511 - 3.3180 1.00 4758 148 0.1598 0.1769 REMARK 3 5 3.3180 - 3.0806 1.00 4694 167 0.1782 0.1873 REMARK 3 6 3.0806 - 2.8992 1.00 4732 156 0.1896 0.2183 REMARK 3 7 2.8992 - 2.7542 1.00 4719 156 0.1885 0.2214 REMARK 3 8 2.7542 - 2.6344 1.00 4686 155 0.1954 0.2621 REMARK 3 9 2.6344 - 2.5331 1.00 4777 154 0.1877 0.2203 REMARK 3 10 2.5331 - 2.4457 1.00 4725 167 0.1944 0.2263 REMARK 3 11 2.4457 - 2.3693 1.00 4660 148 0.1931 0.2757 REMARK 3 12 2.3693 - 2.3016 1.00 4687 171 0.1982 0.2502 REMARK 3 13 2.3016 - 2.2411 1.00 4769 167 0.1982 0.2761 REMARK 3 14 2.2411 - 2.1864 1.00 4730 143 0.1976 0.2064 REMARK 3 15 2.1864 - 2.1367 1.00 4698 153 0.1943 0.2339 REMARK 3 16 2.1367 - 2.0913 1.00 4700 170 0.1994 0.2329 REMARK 3 17 2.0913 - 2.0495 1.00 4707 150 0.2022 0.2171 REMARK 3 18 2.0495 - 2.0108 1.00 4687 172 0.2011 0.2839 REMARK 3 19 2.0108 - 1.9749 1.00 4779 139 0.2078 0.2286 REMARK 3 20 1.9749 - 1.9414 1.00 4754 146 0.2228 0.2791 REMARK 3 21 1.9414 - 1.9101 1.00 4704 154 0.2221 0.3011 REMARK 3 22 1.9101 - 1.8807 1.00 4708 149 0.2225 0.2924 REMARK 3 23 1.8807 - 1.8531 1.00 4772 166 0.2297 0.2354 REMARK 3 24 1.8531 - 1.8270 1.00 4693 152 0.2361 0.2801 REMARK 3 25 1.8270 - 1.8023 1.00 4761 164 0.2360 0.3131 REMARK 3 26 1.8023 - 1.7789 1.00 4673 143 0.2486 0.2954 REMARK 3 27 1.7789 - 1.7567 1.00 4679 163 0.2573 0.2934 REMARK 3 28 1.7567 - 1.7355 1.00 4744 174 0.2575 0.2990 REMARK 3 29 1.7355 - 1.7153 1.00 4644 160 0.2668 0.2639 REMARK 3 30 1.7153 - 1.6961 0.91 4407 125 0.2876 0.3574 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 23.210 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4547 REMARK 3 ANGLE : 1.025 6444 REMARK 3 CHIRALITY : 0.066 780 REMARK 3 PLANARITY : 0.005 583 REMARK 3 DIHEDRAL : 14.673 1932 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'B' AND ((RESSEQ 30:36))) OR (CHAIN 'B' AND REMARK 3 ((RESSEQ 97:100))) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9912 -17.6974 77.8594 REMARK 3 T TENSOR REMARK 3 T11: 2.5628 T22: 1.0350 REMARK 3 T33: 1.2796 T12: -0.8308 REMARK 3 T13: -0.0298 T23: 1.0894 REMARK 3 L TENSOR REMARK 3 L11: 1.2158 L22: 2.1167 REMARK 3 L33: 1.0197 L12: 0.3034 REMARK 3 L13: 0.6061 L23: -0.0909 REMARK 3 S TENSOR REMARK 3 S11: -1.1870 S12: -0.5455 S13: -1.1191 REMARK 3 S21: 0.3563 S22: -0.5382 S23: 0.5591 REMARK 3 S31: 2.4537 S32: -0.4932 S33: -0.5158 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND ((RESSEQ 63:70))) OR (CHAIN 'B' AND REMARK 3 ((RESSEQ 77:86))) REMARK 3 ORIGIN FOR THE GROUP (A): -2.1565 -31.2914 49.5011 REMARK 3 T TENSOR REMARK 3 T11: 1.1673 T22: 0.8300 REMARK 3 T33: 1.1203 T12: -0.2199 REMARK 3 T13: 0.4105 T23: -0.2790 REMARK 3 L TENSOR REMARK 3 L11: 3.8466 L22: 4.8488 REMARK 3 L33: 2.1909 L12: 0.2037 REMARK 3 L13: 2.6278 L23: -1.7631 REMARK 3 S TENSOR REMARK 3 S11: 0.4705 S12: 0.0543 S13: 0.4628 REMARK 3 S21: 0.3073 S22: -0.8735 S23: 0.9341 REMARK 3 S31: 1.0874 S32: -0.4980 S33: 0.3506 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N0T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000082608. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97872 REMARK 200 MONOCHROMATOR : DIAMOND LAUE MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : NULL REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.0 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.90000 REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2GHP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.06 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM LITHIUM SULFATE, 100 MM SODIUM REMARK 280 CITRATE, PH 5.5, 20 % PEG 1,000, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 274K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 35.68500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5650 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 28170 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -30.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 33 REMARK 465 LEU A 34 REMARK 465 THR A 35 REMARK 465 ASN A 399 REMARK 465 HIS A 400 REMARK 465 HIS A 401 REMARK 465 HIS A 402 REMARK 465 HIS A 403 REMARK 465 HIS A 404 REMARK 465 HIS A 405 REMARK 465 HIS A 406 REMARK 465 G B 71 REMARK 465 C B 72 REMARK 465 A B 73 REMARK 465 U B 74 REMARK 465 A B 75 REMARK 465 A B 76 REMARK 465 C B 101 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 804 O HOH A 1076 2.02 REMARK 500 NH1 ARG A 172 O HOH A 843 2.08 REMARK 500 OD2 ASP A 135 O HOH A 1034 2.08 REMARK 500 O HOH A 715 O HOH A 1075 2.09 REMARK 500 O HOH A 743 O HOH A 1076 2.10 REMARK 500 OP2 A B 42 O HOH B 330 2.12 REMARK 500 O HOH B 274 O HOH B 368 2.12 REMARK 500 O GLN A 398 O HOH A 702 2.12 REMARK 500 O HOH B 337 O HOH B 342 2.13 REMARK 500 O LEU A 313 O HOH A 1075 2.14 REMARK 500 NZ LYS A 391 O HOH A 980 2.14 REMARK 500 OE2 GLU A 224 O HOH A 888 2.16 REMARK 500 NZ LYS A 99 O HOH A 1090 2.16 REMARK 500 O HOH A 623 O HOH A 1037 2.17 REMARK 500 O4 U B 32 N6 A B 99 2.17 REMARK 500 O HOH A 709 O HOH A 1074 2.18 REMARK 500 O HOH A 998 O HOH A 1002 2.18 REMARK 500 OP1 A B 56 O HOH B 369 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NZ LYS A 341 O HOH B 383 2657 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 159 94.30 -160.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 501 DBREF 4N0T A 34 400 UNP P49960 PRP24_YEAST 34 400 DBREF1 4N0T B 30 101 GB BK006945.2 DBREF2 4N0T B BK006945.2 366264 366335 SEQADV 4N0T MET A 33 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 401 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 402 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 403 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 404 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 405 UNP P49960 EXPRESSION TAG SEQADV 4N0T HIS A 406 UNP P49960 EXPRESSION TAG SEQADV 4N0T G B 62 GB BK006945. A 66296 ENGINEERED MUTATION SEQADV 4N0T C B 100 GB BK006945. U 66334 ENGINEERED MUTATION SEQADV 4N0T C B 101 GB BK006945. U 66335 ENGINEERED MUTATION SEQRES 1 A 374 MET LEU THR ARG ASN ARG GLU LEU THR THR VAL LEU VAL SEQRES 2 A 374 LYS ASN LEU PRO LYS SER TYR ASN GLN ASN LYS VAL TYR SEQRES 3 A 374 LYS TYR PHE LYS HIS CYS GLY PRO ILE ILE HIS VAL ASP SEQRES 4 A 374 VAL ALA ASP SER LEU LYS LYS ASN PHE ARG PHE ALA ARG SEQRES 5 A 374 ILE GLU PHE ALA ARG TYR ASP GLY ALA LEU ALA ALA ILE SEQRES 6 A 374 THR LYS THR HIS LYS VAL VAL GLY GLN ASN GLU ILE ILE SEQRES 7 A 374 VAL SER HIS LEU THR GLU CYS THR LEU TRP MET THR ASN SEQRES 8 A 374 PHE PRO PRO SER TYR THR GLN ARG ASN ILE ARG ASP LEU SEQRES 9 A 374 LEU GLN ASP ILE ASN VAL VAL ALA LEU SER ILE ARG LEU SEQRES 10 A 374 PRO SER LEU ARG PHE ASN THR SER ARG ARG PHE ALA TYR SEQRES 11 A 374 ILE ASP VAL THR SER LYS GLU ASP ALA ARG TYR CYS VAL SEQRES 12 A 374 GLU LYS LEU ASN GLY LEU LYS ILE GLU GLY TYR THR LEU SEQRES 13 A 374 VAL THR LYS VAL SER ASN PRO LEU GLU LYS SER LYS ARG SEQRES 14 A 374 THR ASP SER ALA THR LEU GLU GLY ARG GLU ILE MET ILE SEQRES 15 A 374 ARG ASN LEU SER THR GLU LEU LEU ASP GLU ASN LEU LEU SEQRES 16 A 374 ARG GLU SER PHE GLU GLY PHE GLY SER ILE GLU LYS ILE SEQRES 17 A 374 ASN ILE PRO ALA GLY GLN LYS GLU HIS SER PHE ASN ASN SEQRES 18 A 374 CYS CYS ALA PHE MET VAL PHE GLU ASN LYS ASP SER ALA SEQRES 19 A 374 GLU ARG ALA LEU GLN MET ASN ARG SER LEU LEU GLY ASN SEQRES 20 A 374 ARG GLU ILE SER VAL SER LEU ALA ASP LYS LYS PRO PHE SEQRES 21 A 374 LEU GLU ARG ASN GLU VAL LYS ARG LEU LEU ALA SER ARG SEQRES 22 A 374 ASN SER LYS GLU LEU GLU THR LEU ILE CYS LEU PHE PRO SEQRES 23 A 374 LEU SER ASP LYS VAL SER PRO SER LEU ILE CYS GLN PHE SEQRES 24 A 374 LEU GLN GLU GLU ILE HIS ILE ASN GLU LYS ASP ILE ARG SEQRES 25 A 374 LYS ILE LEU LEU VAL SER ASP PHE ASN GLY ALA ILE ILE SEQRES 26 A 374 ILE PHE ARG ASP SER LYS PHE ALA ALA LYS MET LEU MET SEQRES 27 A 374 ILE LEU ASN GLY SER GLN PHE GLN GLY LYS VAL ILE ARG SEQRES 28 A 374 SER GLY THR ILE ASN ASP MET LYS ARG TYR TYR ASN ASN SEQRES 29 A 374 GLN GLN ASN HIS HIS HIS HIS HIS HIS HIS SEQRES 1 B 72 G G U C A A U U U G A A A SEQRES 2 B 72 C A A U A C A G A G A U G SEQRES 3 B 72 A U C A G C G G U U C C C SEQRES 4 B 72 C U G C A U A A G G A U G SEQRES 5 B 72 A A C C G U U U U A C A A SEQRES 6 B 72 A G A G A C C HET SO4 A 501 5 HETNAM SO4 SULFATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 HOH *696(H2 O) HELIX 1 1 ARG A 38 LEU A 40 5 3 HELIX 2 2 ASN A 53 LYS A 62 1 10 HELIX 3 3 HIS A 63 GLY A 65 5 3 HELIX 4 4 ARG A 89 THR A 98 1 10 HELIX 5 5 THR A 129 ILE A 140 1 12 HELIX 6 6 SER A 167 ASN A 179 1 13 HELIX 7 7 ASN A 194 LYS A 198 5 5 HELIX 8 8 ASP A 203 GLU A 208 1 6 HELIX 9 9 SER A 218 LEU A 222 5 5 HELIX 10 10 ASP A 223 GLU A 232 1 10 HELIX 11 11 GLY A 233 GLY A 235 5 3 HELIX 12 12 ASN A 262 LEU A 270 1 9 HELIX 13 13 GLN A 271 ASN A 273 5 3 HELIX 14 14 LYS A 289 ALA A 303 1 15 HELIX 15 15 ASN A 306 GLU A 311 1 6 HELIX 16 16 SER A 324 GLU A 335 1 12 HELIX 17 17 ASN A 339 LYS A 341 5 3 HELIX 18 18 SER A 350 ASN A 353 5 4 HELIX 19 19 ASP A 361 ASN A 373 1 13 HELIX 20 20 THR A 386 GLN A 398 1 13 SHEET 1 A 4 ILE A 67 ASP A 74 0 SHEET 2 A 4 ARG A 81 PHE A 87 -1 O PHE A 82 N ALA A 73 SHEET 3 A 4 THR A 42 LEU A 48 -1 N VAL A 45 O ALA A 83 SHEET 4 A 4 ILE A 110 HIS A 113 -1 O SER A 112 N LEU A 44 SHEET 1 B 2 VAL A 103 VAL A 104 0 SHEET 2 B 2 ASN A 107 GLU A 108 -1 O ASN A 107 N VAL A 104 SHEET 1 C 4 ALA A 144 ARG A 148 0 SHEET 2 C 4 PHE A 160 VAL A 165 -1 O TYR A 162 N ARG A 148 SHEET 3 C 4 THR A 118 THR A 122 -1 N LEU A 119 O ILE A 163 SHEET 4 C 4 VAL A 189 VAL A 192 -1 O LYS A 191 N TRP A 120 SHEET 1 D 2 LYS A 182 ILE A 183 0 SHEET 2 D 2 TYR A 186 THR A 187 -1 O TYR A 186 N ILE A 183 SHEET 1 E 4 ILE A 237 ASN A 241 0 SHEET 2 E 4 CYS A 254 PHE A 260 -1 O VAL A 259 N LYS A 239 SHEET 3 E 4 GLU A 211 LEU A 217 -1 N ILE A 214 O ALA A 256 SHEET 4 E 4 SER A 283 LEU A 286 -1 O SER A 285 N MET A 213 SHEET 1 F 2 LEU A 276 LEU A 277 0 SHEET 2 F 2 ARG A 280 GLU A 281 -1 O ARG A 280 N LEU A 277 SHEET 1 G 4 ILE A 343 VAL A 349 0 SHEET 2 G 4 GLY A 354 PHE A 359 -1 O ILE A 356 N LEU A 347 SHEET 3 G 4 LEU A 313 PHE A 317 -1 N ILE A 314 O ILE A 357 SHEET 4 G 4 ARG A 383 GLY A 385 -1 O ARG A 383 N PHE A 317 SHEET 1 H 2 GLN A 376 PHE A 377 0 SHEET 2 H 2 LYS A 380 VAL A 381 -1 O LYS A 380 N PHE A 377 CISPEP 1 PHE A 317 PRO A 318 0 -8.74 SITE 1 AC1 4 THR A 386 ASN A 388 ARG A 392 HOH A 872 CRYST1 61.782 71.370 82.081 90.00 109.62 90.00 P 1 21 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016186 0.000000 0.005771 0.00000 SCALE2 0.000000 0.014011 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012934 0.00000