HEADER TRANSPORT PROTEIN 03-OCT-13 4N15 TITLE CRYSTAL STRUCTURE OF A TRAP PERIPLASMIC SOLUTE BINDING PROTEIN FROM TITLE 2 BURKHOLDERIA AMBIFARIA (BAM_6123), TARGET EFI-510059, WITH BOUND TITLE 3 BETA-D-GLUCURONATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRAP DICARBOXYLATE TRANSPORTER, DCTP SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRAP PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BURKHOLDERIA AMBIFARIA; SOURCE 3 ORGANISM_TAXID: 339670; SOURCE 4 STRAIN: ATCC BAA-244 / AMMD; SOURCE 5 GENE: BAMB_6123; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TRAP PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR M.W.VETTING,R.TORO,R.BHOSLE,N.F.AL OBAIDI,S.ZHAO,M.STEAD, AUTHOR 2 J.D.ATTONITO,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,B.HILLERICH,J.LOVE, AUTHOR 3 R.D.SEIDEL,H.J.IMKER,M.P.JACOBSON,J.A.GERLT,S.C.ALMO,ENZYME FUNCTION AUTHOR 4 INITIATIVE (EFI) REVDAT 6 20-SEP-23 4N15 1 HETSYN REVDAT 5 29-JUL-20 4N15 1 COMPND REMARK SEQADV HETNAM REVDAT 5 2 1 LINK SITE REVDAT 4 04-APR-18 4N15 1 REMARK REVDAT 3 15-NOV-17 4N15 1 REMARK REVDAT 2 25-FEB-15 4N15 1 JRNL REVDAT 1 16-OCT-13 4N15 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.0 REMARK 3 NUMBER OF REFLECTIONS : 31126 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.160 REMARK 3 R VALUE (WORKING SET) : 0.158 REMARK 3 FREE R VALUE : 0.196 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1572 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 22.0686 - 3.6672 0.92 2775 148 0.1324 0.1597 REMARK 3 2 3.6672 - 2.9129 0.96 2745 166 0.1490 0.1495 REMARK 3 3 2.9129 - 2.5453 0.97 2796 135 0.1583 0.2340 REMARK 3 4 2.5453 - 2.3129 0.98 2787 148 0.1540 0.2196 REMARK 3 5 2.3129 - 2.1472 0.99 2817 159 0.1552 0.1967 REMARK 3 6 2.1472 - 2.0207 1.00 2847 135 0.1667 0.2258 REMARK 3 7 2.0207 - 1.9196 1.00 2809 145 0.1804 0.2170 REMARK 3 8 1.9196 - 1.8361 0.98 2752 168 0.1906 0.2041 REMARK 3 9 1.8361 - 1.7654 0.95 2687 143 0.1902 0.2162 REMARK 3 10 1.7654 - 1.7045 0.88 2470 125 0.1924 0.2815 REMARK 3 11 1.7045 - 1.6510 0.73 2069 100 0.1989 0.2855 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.230 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.59 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2397 REMARK 3 ANGLE : 1.273 3250 REMARK 3 CHIRALITY : 0.074 358 REMARK 3 PLANARITY : 0.007 422 REMARK 3 DIHEDRAL : 13.004 895 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 27 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.4265 26.5119 1.4250 REMARK 3 T TENSOR REMARK 3 T11: 0.0969 T22: 0.1346 REMARK 3 T33: 0.1343 T12: -0.0251 REMARK 3 T13: -0.0123 T23: 0.0377 REMARK 3 L TENSOR REMARK 3 L11: 1.4692 L22: 0.7491 REMARK 3 L33: 0.9385 L12: 0.2536 REMARK 3 L13: 0.1806 L23: -0.0235 REMARK 3 S TENSOR REMARK 3 S11: -0.0594 S12: 0.0993 S13: 0.1937 REMARK 3 S21: -0.0462 S22: 0.0140 S23: -0.0995 REMARK 3 S31: -0.2320 S32: 0.1881 S33: 0.0352 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 95 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.8026 12.9043 -0.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.1078 T22: 0.1306 REMARK 3 T33: 0.0962 T12: 0.0129 REMARK 3 T13: -0.0048 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.8212 L22: 0.9111 REMARK 3 L33: 1.3247 L12: 0.0344 REMARK 3 L13: -0.7644 L23: -0.1382 REMARK 3 S TENSOR REMARK 3 S11: -0.0408 S12: 0.2345 S13: -0.0702 REMARK 3 S21: -0.0264 S22: 0.0332 S23: -0.0745 REMARK 3 S31: 0.2532 S32: 0.1303 S33: -0.0081 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 96 THROUGH 123 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9942 9.5720 17.8865 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.0695 REMARK 3 T33: 0.0916 T12: -0.0009 REMARK 3 T13: -0.0352 T23: 0.0039 REMARK 3 L TENSOR REMARK 3 L11: 1.0819 L22: 1.1125 REMARK 3 L33: 0.4198 L12: 0.2662 REMARK 3 L13: -0.1863 L23: 0.2017 REMARK 3 S TENSOR REMARK 3 S11: 0.1667 S12: -0.1447 S13: -0.0148 REMARK 3 S21: 0.1498 S22: -0.0948 S23: -0.0190 REMARK 3 S31: 0.3351 S32: 0.0242 S33: -0.0087 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 124 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.4427 12.4583 11.7415 REMARK 3 T TENSOR REMARK 3 T11: 0.1260 T22: 0.0837 REMARK 3 T33: 0.0904 T12: 0.0076 REMARK 3 T13: -0.0043 T23: -0.0019 REMARK 3 L TENSOR REMARK 3 L11: 0.5723 L22: 0.5418 REMARK 3 L33: 0.5912 L12: 0.1040 REMARK 3 L13: -0.0401 L23: 0.1092 REMARK 3 S TENSOR REMARK 3 S11: 0.0355 S12: -0.0382 S13: -0.0275 REMARK 3 S21: 0.2084 S22: -0.0422 S23: -0.0072 REMARK 3 S31: 0.1807 S32: 0.0531 S33: 0.0047 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 154 THROUGH 191 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9112 3.3373 7.7627 REMARK 3 T TENSOR REMARK 3 T11: 0.1720 T22: 0.1053 REMARK 3 T33: 0.2058 T12: -0.1761 REMARK 3 T13: 0.2260 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 0.8018 L22: 0.6101 REMARK 3 L33: 0.6132 L12: -0.0025 REMARK 3 L13: -0.0404 L23: -0.0857 REMARK 3 S TENSOR REMARK 3 S11: 0.0152 S12: -0.0569 S13: -0.0841 REMARK 3 S21: 0.5236 S22: -0.1883 S23: 0.4595 REMARK 3 S31: 0.2914 S32: -0.1744 S33: 0.2556 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 192 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.9260 14.7461 2.0402 REMARK 3 T TENSOR REMARK 3 T11: 0.0808 T22: 0.1929 REMARK 3 T33: 0.1226 T12: -0.0705 REMARK 3 T13: 0.0080 T23: -0.0313 REMARK 3 L TENSOR REMARK 3 L11: 0.7241 L22: 0.7432 REMARK 3 L33: 0.6911 L12: 0.2457 REMARK 3 L13: 0.2534 L23: -0.0530 REMARK 3 S TENSOR REMARK 3 S11: -0.1817 S12: 0.2659 S13: 0.0105 REMARK 3 S21: -0.0819 S22: 0.0748 S23: 0.1950 REMARK 3 S31: 0.0909 S32: -0.3338 S33: 0.0593 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 249 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.9574 15.7098 7.0740 REMARK 3 T TENSOR REMARK 3 T11: 0.0980 T22: 0.1217 REMARK 3 T33: 0.0767 T12: -0.0133 REMARK 3 T13: 0.0094 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 1.7624 L22: 0.6631 REMARK 3 L33: 0.6909 L12: 0.0523 REMARK 3 L13: -0.1749 L23: 0.3494 REMARK 3 S TENSOR REMARK 3 S11: -0.0949 S12: 0.2315 S13: 0.0053 REMARK 3 S21: 0.1113 S22: -0.0047 S23: 0.0502 REMARK 3 S31: 0.1525 S32: -0.0353 S33: 0.0315 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 250 THROUGH 284 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.1233 25.7639 12.5311 REMARK 3 T TENSOR REMARK 3 T11: 0.0775 T22: 0.0841 REMARK 3 T33: 0.1120 T12: 0.0028 REMARK 3 T13: -0.0151 T23: -0.0103 REMARK 3 L TENSOR REMARK 3 L11: 2.5096 L22: 0.4837 REMARK 3 L33: 0.7258 L12: 0.0613 REMARK 3 L13: -0.1203 L23: 0.1427 REMARK 3 S TENSOR REMARK 3 S11: -0.0137 S12: -0.0215 S13: 0.1597 REMARK 3 S21: 0.0621 S22: -0.0215 S23: 0.0583 REMARK 3 S31: -0.0530 S32: 0.0261 S33: 0.0159 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 285 THROUGH 311 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1896 4.9536 18.5801 REMARK 3 T TENSOR REMARK 3 T11: 0.5414 T22: 0.1849 REMARK 3 T33: 0.1696 T12: -0.0332 REMARK 3 T13: 0.0880 T23: -0.0080 REMARK 3 L TENSOR REMARK 3 L11: 0.7907 L22: 1.3340 REMARK 3 L33: 0.1359 L12: -0.5506 REMARK 3 L13: 0.0356 L23: 0.2443 REMARK 3 S TENSOR REMARK 3 S11: -0.1862 S12: -0.1328 S13: -0.0593 REMARK 3 S21: 0.7452 S22: -0.0245 S23: 0.2626 REMARK 3 S31: 0.4647 S32: -0.1444 S33: -0.1194 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 312 THROUGH 327 ) REMARK 3 ORIGIN FOR THE GROUP (A): 35.6749 1.5891 21.4692 REMARK 3 T TENSOR REMARK 3 T11: 0.3000 T22: 0.1574 REMARK 3 T33: 0.1632 T12: -0.0303 REMARK 3 T13: -0.0786 T23: 0.0544 REMARK 3 L TENSOR REMARK 3 L11: 2.3480 L22: 3.8873 REMARK 3 L33: 3.5010 L12: -1.0830 REMARK 3 L13: -0.8962 L23: 1.8409 REMARK 3 S TENSOR REMARK 3 S11: 0.2489 S12: 0.1244 S13: -0.1240 REMARK 3 S21: -0.2899 S22: -0.1675 S23: -0.0239 REMARK 3 S31: -0.0231 S32: 0.1512 S33: -0.0331 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N15 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082620. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : RIGAKU RAXIS IV REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32282 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.650 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.6 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 14.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.65 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.36500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 4LN5 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 33.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.84 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 59.1 MG/ML PROTEIN IN 10 MM HEPES, PH REMARK 280 7.5, 5 MM DTT, 10 MM D-GLUCURONIC ACID, RESERVOIR: 0.2 M REMARK 280 MAGNESIUM ACETATE, 20% W/V PEG3350 (MCSG1 C5), CRYOPROTECTION: 4: REMARK 280 1 50% W/V PEG3350:RESERVOIR, VAPOR DIFFUSION, SITTING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.76100 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 27.76100 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 48.09500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 50.89050 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 48.09500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 50.89050 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 27.76100 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 48.09500 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 50.89050 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 27.76100 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 48.09500 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 50.89050 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 513 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 749 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 HIS A 3 REMARK 465 ARG A 4 REMARK 465 PHE A 5 REMARK 465 PRO A 6 REMARK 465 ARG A 7 REMARK 465 SER A 8 REMARK 465 ARG A 9 REMARK 465 THR A 10 REMARK 465 ALA A 11 REMARK 465 LEU A 12 REMARK 465 ALA A 13 REMARK 465 VAL A 14 REMARK 465 ALA A 15 REMARK 465 LEU A 16 REMARK 465 MET A 17 REMARK 465 ALA A 18 REMARK 465 GLY A 19 REMARK 465 PHE A 20 REMARK 465 ALA A 21 REMARK 465 MET A 22 REMARK 465 SER A 23 REMARK 465 ALA A 24 REMARK 465 GLN A 25 REMARK 465 ALA A 26 REMARK 465 LYS A 328 REMARK 465 ALA A 329 REMARK 465 GLU A 330 REMARK 465 ASN A 331 REMARK 465 LEU A 332 REMARK 465 TYR A 333 REMARK 465 PHE A 334 REMARK 465 GLN A 335 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HH TYR A 152 HD1 HIS A 219 1.25 REMARK 500 O HOH A 699 O HOH A 762 2.04 REMARK 500 O HOH A 782 O HOH A 792 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 713 O HOH A 713 3555 2.06 REMARK 500 O HOH A 590 O HOH A 610 4555 2.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 113 -178.99 -170.76 REMARK 500 ALA A 153 -167.12 -165.77 REMARK 500 ASN A 209 173.96 178.78 REMARK 500 THR A 234 134.44 -39.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 401 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 322 OD1 REMARK 620 2 HOH A 523 O 92.4 REMARK 620 3 HOH A 542 O 86.9 87.3 REMARK 620 4 HOH A 593 O 90.9 174.4 88.3 REMARK 620 5 HOH A 716 O 85.6 93.0 172.5 91.8 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N17 RELATED DB: PDB REMARK 900 RELATED ID: EFI-510059 RELATED DB: TARGETTRACK DBREF 4N15 A 1 328 UNP Q0B2F6 Q0B2F6_BURCM 1 328 SEQADV 4N15 ALA A 329 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 GLU A 330 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 ASN A 331 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 LEU A 332 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 TYR A 333 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 PHE A 334 UNP Q0B2F6 EXPRESSION TAG SEQADV 4N15 GLN A 335 UNP Q0B2F6 EXPRESSION TAG SEQRES 1 A 335 MET THR HIS ARG PHE PRO ARG SER ARG THR ALA LEU ALA SEQRES 2 A 335 VAL ALA LEU MET ALA GLY PHE ALA MET SER ALA GLN ALA SEQRES 3 A 335 ARG VAL PHE ARG SER ALA ASP VAL HIS GLY ASP SER PHE SEQRES 4 A 335 PRO THR ASN MET ALA VAL LYS PHE MET GLY ASP GLU LEU SEQRES 5 A 335 SER LYS LEU THR GLY GLY LYS ASP SER ILE LYS VAL PHE SEQRES 6 A 335 GLY ASN SER ALA LEU GLY SER GLU LYS ASP THR VAL ASP SEQRES 7 A 335 GLN VAL ARG ILE GLY ALA ILE ASP MET ALA ARG VAL ASN SEQRES 8 A 335 GLY ALA SER PHE ASN GLU ILE VAL PRO GLU SER LEU ILE SEQRES 9 A 335 PRO SER PHE PRO PHE LEU PHE ARG ASP VAL ASP HIS PHE SEQRES 10 A 335 ARG LYS ALA MET TYR GLY PRO ALA GLY GLN LYS ILE LEU SEQRES 11 A 335 ASP ALA PHE ALA ALA LYS GLY MET ILE ALA LEU THR PHE SEQRES 12 A 335 TYR GLU SER GLY ALA ARG SER ILE TYR ALA LYS ARG PRO SEQRES 13 A 335 VAL ARG THR PRO ALA ASP MET LYS GLY LEU LYS VAL ARG SEQRES 14 A 335 VAL GLN PRO SER ASP LEU MET VAL ASP GLU ILE ARG ALA SEQRES 15 A 335 MET GLY GLY THR PRO THR PRO MET PRO PHE ALA GLU VAL SEQRES 16 A 335 TYR THR GLY LEU LYS THR GLY LEU VAL ASP ALA ALA GLU SEQRES 17 A 335 ASN ASN LEU PRO SER TYR GLU GLU THR LYS HIS PHE GLU SEQRES 18 A 335 VAL ALA PRO ASP TYR SER GLU THR GLN HIS ALA MET THR SEQRES 19 A 335 PRO GLU VAL LEU VAL PHE SER LYS LYS ILE TRP ASP THR SEQRES 20 A 335 LEU SER PRO GLN GLU GLN ALA ALA ILE ARG LYS ALA ALA SEQRES 21 A 335 ALA ASP SER VAL PRO TYR TYR GLN LYS LEU TRP THR ALA SEQRES 22 A 335 ARG GLU ALA SER ALA GLN GLN ALA VAL THR LYS GLY GLY SEQRES 23 A 335 ALA ASN ILE LEU PRO ALA ALA GLN VAL ASP ARG ALA ALA SEQRES 24 A 335 PHE VAL LYS ALA MET GLN PRO LEU TRP THR LYS TYR GLU SEQRES 25 A 335 LYS THR PRO GLN MET LYS GLN ILE VAL ASP GLU ILE GLU SEQRES 26 A 335 ALA THR LYS ALA GLU ASN LEU TYR PHE GLN HET MG A 401 1 HET BDP A 402 13 HETNAM MG MAGNESIUM ION HETNAM BDP BETA-D-GLUCOPYRANURONIC ACID HETSYN BDP BETA-D-GLUCURONIC ACID; D-GLUCURONIC ACID; GLUCURONIC HETSYN 2 BDP ACID FORMUL 2 MG MG 2+ FORMUL 3 BDP C6 H10 O7 FORMUL 4 HOH *302(H2 O) HELIX 1 1 PHE A 39 THR A 56 1 18 HELIX 2 2 SER A 72 ILE A 82 1 11 HELIX 3 3 ALA A 93 ASN A 96 5 4 HELIX 4 4 VAL A 99 PHE A 107 5 9 HELIX 5 5 ASP A 113 TYR A 122 1 10 HELIX 6 6 GLY A 123 ALA A 132 1 10 HELIX 7 7 PHE A 133 LYS A 136 5 4 HELIX 8 8 THR A 159 LYS A 164 1 6 HELIX 9 9 SER A 173 MET A 183 1 11 HELIX 10 10 PRO A 191 ALA A 193 5 3 HELIX 11 11 GLU A 194 THR A 201 1 8 HELIX 12 12 ASN A 210 THR A 217 1 8 HELIX 13 13 LYS A 218 ALA A 223 1 6 HELIX 14 14 LYS A 242 ASP A 246 1 5 HELIX 15 15 SER A 249 GLY A 285 1 37 HELIX 16 16 PRO A 291 VAL A 295 5 5 HELIX 17 17 ASP A 296 GLN A 305 1 10 HELIX 18 18 PRO A 306 GLU A 312 1 7 HELIX 19 19 THR A 314 ALA A 326 1 13 SHEET 1 A 5 SER A 61 PHE A 65 0 SHEET 2 A 5 VAL A 28 ALA A 32 1 N PHE A 29 O SER A 61 SHEET 3 A 5 MET A 87 ASN A 91 1 O ARG A 89 N ALA A 32 SHEET 4 A 5 GLU A 236 SER A 241 -1 O VAL A 237 N VAL A 90 SHEET 5 A 5 MET A 138 TYR A 144 -1 N TYR A 144 O GLU A 236 SHEET 1 B 4 ALA A 206 ASN A 209 0 SHEET 2 B 4 ARG A 149 ALA A 153 -1 N TYR A 152 O ALA A 207 SHEET 3 B 4 ASP A 225 ALA A 232 -1 O SER A 227 N ILE A 151 SHEET 4 B 4 ASN A 288 LEU A 290 1 O LEU A 290 N TYR A 226 SHEET 1 C 2 LYS A 167 VAL A 170 0 SHEET 2 C 2 THR A 186 PRO A 189 1 O THR A 186 N VAL A 168 LINK OD1 ASP A 322 MG MG A 401 1555 1555 2.07 LINK MG MG A 401 O HOH A 523 1555 1555 2.12 LINK MG MG A 401 O HOH A 542 1555 1555 2.10 LINK MG MG A 401 O HOH A 593 1555 1555 2.15 LINK MG MG A 401 O HOH A 716 1555 1555 2.01 CRYST1 96.190 101.781 55.522 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010396 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009825 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018011 0.00000