HEADER VIRAL PROTEIN 04-OCT-13 4N23 TITLE CRYSTAL STRUCTURE OF THE GP2 CORE DOMAIN FROM THE CALIFORNIA ACADEMY TITLE 2 OF SCIENCE VIRUS, MONOCLINIC SYMMETRY COMPND MOL_ID: 1; COMPND 2 MOLECULE: GP2 ECTODOMAIN; COMPND 3 CHAIN: A, B, C; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAS VIRUS; SOURCE 3 ORGANISM_TAXID: 1223561; SOURCE 4 GENE: GP2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS MARBURG VIRUS, POST-FUSION CONFORMATION, STRUCTURAL GENOMICS, PSI- KEYWDS 2 BIOLOGY, NEW YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM, NYSGRC, KEYWDS 3 VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.N.MALASHKEVICH,J.F.KOELLHOFFER,Z.DAI,R.TORO,J.R.LAI,S.C.ALMO,NEW AUTHOR 2 YORK STRUCTURAL GENOMICS RESEARCH CONSORTIUM (NYSGRC) REVDAT 4 20-SEP-23 4N23 1 REMARK REVDAT 3 02-APR-14 4N23 1 JRNL REVDAT 2 08-JAN-14 4N23 1 JRNL REVDAT 1 27-NOV-13 4N23 0 JRNL AUTH J.F.KOELLHOFFER,Z.DAI,V.N.MALASHKEVICH,M.D.STENGLEIN,Y.LIU, JRNL AUTH 2 R.TORO,J.S HARRISON,K.CHANDRAN,J.L.DERISI,S.C.ALMO,J.R.LAI JRNL TITL STRUCTURAL CHARACTERIZATION OF THE GLYCOPROTEIN GP2 CORE JRNL TITL 2 DOMAIN FROM THE CAS VIRUS, A NOVEL ARENAVIRUS-LIKE SPECIES. JRNL REF J.MOL.BIOL. V. 426 1452 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24333483 JRNL DOI 10.1016/J.JMB.2013.12.009 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 26977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.228 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1350 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1766 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.14 REMARK 3 BIN R VALUE (WORKING SET) : 0.2070 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2986 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 40 REMARK 3 SOLVENT ATOMS : 131 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 52.45 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 30.71000 REMARK 3 B22 (A**2) : -10.14000 REMARK 3 B33 (A**2) : -20.57000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 4.09000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.038 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.035 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.078 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.458 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.962 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.937 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3106 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4181 ; 1.123 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 378 ; 4.676 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 154 ;41.306 ;26.169 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 617 ;17.636 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ;13.593 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 472 ; 0.080 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2258 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 3 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.299 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : 1/2H+3/2K, 1/2H-1/2K, -1/2H-1/2K-L REMARK 3 TWIN FRACTION : 0.347 REMARK 3 TWIN DOMAIN : 3 REMARK 3 TWIN OPERATOR : 1/2H-3/2K, -1/2H-1/2K, -1/2H+1/2K-L REMARK 3 TWIN FRACTION : 0.354 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 3 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 229 A 351 REMARK 3 RESIDUE RANGE : A 401 A 401 REMARK 3 RESIDUE RANGE : C 401 C 401 REMARK 3 ORIGIN FOR THE GROUP (A): 10.9126 23.0350 50.8486 REMARK 3 T TENSOR REMARK 3 T11: 0.0997 T22: 0.0231 REMARK 3 T33: 0.1365 T12: -0.0182 REMARK 3 T13: 0.0257 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 0.5231 L22: 0.2276 REMARK 3 L33: 1.0566 L12: -0.0444 REMARK 3 L13: 0.7091 L23: -0.0440 REMARK 3 S TENSOR REMARK 3 S11: -0.0158 S12: 0.0406 S13: 0.0112 REMARK 3 S21: -0.0354 S22: 0.0004 S23: 0.0409 REMARK 3 S31: -0.0312 S32: 0.0965 S33: 0.0154 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 230 B 351 REMARK 3 RESIDUE RANGE : B 401 B 401 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9352 26.4866 51.4911 REMARK 3 T TENSOR REMARK 3 T11: 0.0924 T22: 0.0169 REMARK 3 T33: 0.1386 T12: 0.0092 REMARK 3 T13: 0.0061 T23: 0.0113 REMARK 3 L TENSOR REMARK 3 L11: 0.5988 L22: 0.2131 REMARK 3 L33: 2.6125 L12: -0.0215 REMARK 3 L13: -0.3872 L23: -0.1143 REMARK 3 S TENSOR REMARK 3 S11: -0.0449 S12: 0.0203 S13: 0.0847 REMARK 3 S21: -0.0135 S22: -0.0530 S23: -0.0200 REMARK 3 S31: 0.0669 S32: -0.0540 S33: 0.0979 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 228 C 351 REMARK 3 RESIDUE RANGE : C 402 C 403 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3476 22.2374 50.1907 REMARK 3 T TENSOR REMARK 3 T11: 0.0882 T22: 0.0084 REMARK 3 T33: 0.1245 T12: 0.0076 REMARK 3 T13: 0.0199 T23: 0.0043 REMARK 3 L TENSOR REMARK 3 L11: 0.5855 L22: 0.1911 REMARK 3 L33: 1.4560 L12: -0.0194 REMARK 3 L13: 0.1299 L23: 0.1853 REMARK 3 S TENSOR REMARK 3 S11: -0.0286 S12: 0.0525 S13: -0.0545 REMARK 3 S21: -0.0158 S22: 0.0068 S23: -0.0116 REMARK 3 S31: -0.0542 S32: -0.0212 S33: 0.0218 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: U VALUES : WITH TLS ADDED HYDROGENS REMARK 3 HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 4 REMARK 4 4N23 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082654. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 07-DEC-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 31-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : NULL REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27014 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.700 REMARK 200 R MERGE (I) : 0.07200 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.1 REMARK 200 STARTING MODEL: 4N21 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: MCSG4-D10 - 0.2 M LITHIUM SULFATE, 0.1 REMARK 280 M MES-NAOH, PH 6, 35% MPD, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 40.43300 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.35900 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 40.43300 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.35900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13490 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -156.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C3 MPD C 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 535 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 222 REMARK 465 HIS A 223 REMARK 465 HIS A 224 REMARK 465 HIS A 225 REMARK 465 HIS A 226 REMARK 465 HIS A 227 REMARK 465 HIS A 228 REMARK 465 MET B 222 REMARK 465 HIS B 223 REMARK 465 HIS B 224 REMARK 465 HIS B 225 REMARK 465 HIS B 226 REMARK 465 HIS B 227 REMARK 465 HIS B 228 REMARK 465 GLU B 229 REMARK 465 MET C 222 REMARK 465 HIS C 223 REMARK 465 HIS C 224 REMARK 465 HIS C 225 REMARK 465 HIS C 226 REMARK 465 HIS C 227 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 319 90.58 42.83 REMARK 500 MET A 322 -38.04 -132.73 REMARK 500 CYS A 323 -77.44 54.97 REMARK 500 LYS B 319 101.72 58.54 REMARK 500 MET B 322 59.70 -155.28 REMARK 500 TYR C 232 7.98 -67.42 REMARK 500 LYS C 319 98.17 64.88 REMARK 500 MET C 322 -39.63 -142.12 REMARK 500 CYS C 323 -102.54 51.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MPD C 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MRD C 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4N21 RELATED DB: PDB REMARK 900 TRICLINIC SYMMETRY, TWO TRIMERS PER ASYMMETRIC UNIT, SOMEWHAT REMARK 900 BETTER DENSITY IN THE LOOP AREA. REMARK 900 RELATED ID: NYSGRC-031146 RELATED DB: TARGETTRACK DBREF 4N23 A 222 351 PDB 4N23 4N23 222 351 DBREF 4N23 B 222 351 PDB 4N23 4N23 222 351 DBREF 4N23 C 222 351 PDB 4N23 4N23 222 351 SEQRES 1 A 130 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 A 130 GLY ASN MET LYS GLN ILE GLU ASP LYS ILE GLU GLU ILE SEQRES 3 A 130 LEU SER LYS ILE TYR HIS ILE GLU ASN GLU ILE ALA ARG SEQRES 4 A 130 ILE LYS LYS LEU ILE GLY ALA ILE ALA SER LYS ILE ILE SEQRES 5 A 130 LYS THR ALA ASN TYR THR THR ASN ALA LEU PHE LEU LEU SEQRES 6 A 130 ASN LYS GLU GLU SER GLU ILE ARG ASP HIS VAL VAL GLU SEQRES 7 A 130 HIS GLU LEU ALA LEU ASN TYR LEU LEU ALA HIS GLN GLY SEQRES 8 A 130 GLY LEU CYS ASN VAL VAL LYS GLY PRO MET CYS SER SER SEQRES 9 A 130 ASP ILE ASP ASP PHE SER LYS ASN VAL SER ASP MET ILE SEQRES 10 A 130 ASP LYS VAL HIS GLU GLU MET LYS LYS PHE TYR HIS GLU SEQRES 1 B 130 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 B 130 GLY ASN MET LYS GLN ILE GLU ASP LYS ILE GLU GLU ILE SEQRES 3 B 130 LEU SER LYS ILE TYR HIS ILE GLU ASN GLU ILE ALA ARG SEQRES 4 B 130 ILE LYS LYS LEU ILE GLY ALA ILE ALA SER LYS ILE ILE SEQRES 5 B 130 LYS THR ALA ASN TYR THR THR ASN ALA LEU PHE LEU LEU SEQRES 6 B 130 ASN LYS GLU GLU SER GLU ILE ARG ASP HIS VAL VAL GLU SEQRES 7 B 130 HIS GLU LEU ALA LEU ASN TYR LEU LEU ALA HIS GLN GLY SEQRES 8 B 130 GLY LEU CYS ASN VAL VAL LYS GLY PRO MET CYS SER SER SEQRES 9 B 130 ASP ILE ASP ASP PHE SER LYS ASN VAL SER ASP MET ILE SEQRES 10 B 130 ASP LYS VAL HIS GLU GLU MET LYS LYS PHE TYR HIS GLU SEQRES 1 C 130 MET HIS HIS HIS HIS HIS HIS GLU ASN LEU TYR PHE GLN SEQRES 2 C 130 GLY ASN MET LYS GLN ILE GLU ASP LYS ILE GLU GLU ILE SEQRES 3 C 130 LEU SER LYS ILE TYR HIS ILE GLU ASN GLU ILE ALA ARG SEQRES 4 C 130 ILE LYS LYS LEU ILE GLY ALA ILE ALA SER LYS ILE ILE SEQRES 5 C 130 LYS THR ALA ASN TYR THR THR ASN ALA LEU PHE LEU LEU SEQRES 6 C 130 ASN LYS GLU GLU SER GLU ILE ARG ASP HIS VAL VAL GLU SEQRES 7 C 130 HIS GLU LEU ALA LEU ASN TYR LEU LEU ALA HIS GLN GLY SEQRES 8 C 130 GLY LEU CYS ASN VAL VAL LYS GLY PRO MET CYS SER SER SEQRES 9 C 130 ASP ILE ASP ASP PHE SER LYS ASN VAL SER ASP MET ILE SEQRES 10 C 130 ASP LYS VAL HIS GLU GLU MET LYS LYS PHE TYR HIS GLU HET MPD A 401 8 HET MPD B 401 8 HET MPD C 401 8 HET MPD C 402 8 HET MRD C 403 8 HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL HETNAM MRD (4R)-2-METHYLPENTANE-2,4-DIOL FORMUL 4 MPD 4(C6 H14 O2) FORMUL 8 MRD C6 H14 O2 FORMUL 9 HOH *131(H2 O) HELIX 1 1 ASN A 230 LEU A 308 1 79 HELIX 2 2 ALA A 309 GLY A 312 5 4 HELIX 3 3 GLY A 313 VAL A 318 1 6 HELIX 4 4 PHE A 330 PHE A 348 1 19 HELIX 5 5 LEU B 231 LEU B 308 1 78 HELIX 6 6 ALA B 309 GLY B 312 5 4 HELIX 7 7 GLY B 313 VAL B 318 1 6 HELIX 8 8 PHE B 330 LYS B 347 1 18 HELIX 9 9 PHE B 348 GLU B 351 5 4 HELIX 10 10 ASN C 230 LEU C 308 1 79 HELIX 11 11 ALA C 309 GLN C 311 5 3 HELIX 12 12 GLY C 312 VAL C 318 1 7 HELIX 13 13 PHE C 330 LYS C 347 1 18 HELIX 14 14 PHE C 348 HIS C 350 5 3 SSBOND 1 CYS B 315 CYS B 323 1555 1555 2.04 SITE 1 AC1 4 ASN A 277 HIS A 342 MET A 345 ASN B 277 SITE 1 AC2 6 LYS A 274 TYR A 278 LYS A 340 LYS B 274 SITE 2 AC2 6 TYR B 278 LYS C 340 SITE 1 AC3 6 THR A 279 THR B 275 ALA B 276 THR C 275 SITE 2 AC3 6 ALA C 276 THR C 279 SITE 1 AC4 4 HIS C 342 LYS C 346 HOH C 517 HOH C 527 SITE 1 AC5 4 LYS B 340 TYR C 278 HOH C 519 HOH C 526 CRYST1 80.866 46.718 109.474 90.00 104.28 90.00 C 1 2 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012366 0.000000 0.003148 0.00000 SCALE2 0.000000 0.021405 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009426 0.00000