HEADER FLUORESCENT PROTEIN 07-OCT-13 4N3D TITLE CRYSTAL STRUCTURE OF THE DIMERIC VARIANT EGFP-K162Q IN P61 SPACE GROUP COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS EGFP, GREEN FLUORESCENT PROTEIN, BETA-BARREL, THR-TYR-GLY KEYWDS 2 CHROMOPHORE, FLUORESCENT BIOMARKER, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR N.V.PLETNEVA,V.Z.PLETNEV,S.V.PLETNEV REVDAT 1 27-AUG-14 4N3D 0 JRNL AUTH N.V.PLETNEVA,S.V PLETNEV,A.M.BOGDANOV,E.A.GORYACHEVA, JRNL AUTH 2 I.V.ARTEMYEV,E.A.SOUSLOVA,S.F.ARKHIPOVA,V.Z.PLETNEV JRNL TITL THREE DIMENSIONAL STRUCTURE OF THE DIMERIC GENE-ENGINEERED JRNL TITL 2 VARIANT OF GREEN FLUORESCENT PROTEIN EGFP-K162Q IN P61 JRNL TITL 3 CRYSTAL SPACE GROUP JRNL REF RUS.J.BIOORG.CHEM. V. 40 383 2014 JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.34 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.34 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.21 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 122019 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1231 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.34 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.38 REMARK 3 REFLECTION IN BIN (WORKING SET) : 8801 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 BIN R VALUE (WORKING SET) : 0.2640 REMARK 3 BIN FREE R VALUE SET COUNT : 98 REMARK 3 BIN FREE R VALUE : 0.2710 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3620 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 31 REMARK 3 SOLVENT ATOMS : 549 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.38 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.06000 REMARK 3 B22 (A**2) : -0.06000 REMARK 3 B33 (A**2) : 0.09000 REMARK 3 B12 (A**2) : -0.03000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.050 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.050 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3923 ; 0.024 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5342 ; 2.041 ; 1.976 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 498 ; 6.946 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 189 ;33.784 ;25.344 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 691 ;14.049 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;18.183 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 575 ; 0.151 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3019 ; 0.018 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2349 ; 1.548 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3835 ; 2.518 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1574 ; 3.419 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1489 ; 5.458 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4N3D COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-13. REMARK 100 THE RCSB ID CODE IS RCSB082700. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 2013 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : MIRROR REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 122157 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.340 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.34 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.3 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.65900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: TWO MICROLITERS OF PROTEIN 10MG/ML IN REMARK 280 BUFFER 20 TRIS 8.0 100 NACL MIXED WITH EQUAL AMOUNT OF RESEVOIR REMARK 280 SOLUTION - 0.056 NAH2PO4, 1.344 M K2HPO4 PH 8.2, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 293.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.63033 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.26067 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 32.44550 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 54.07583 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 10.81517 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -11 REMARK 465 ARG A -10 REMARK 465 GLY A -9 REMARK 465 SER A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLY A -1 REMARK 465 SER A 0 REMARK 465 VAL A 1 REMARK 465 SER A 2 REMARK 465 LEU A 231 REMARK 465 GLY A 232 REMARK 465 MET B -11 REMARK 465 ARG B -10 REMARK 465 GLY B -9 REMARK 465 SER B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLY B -1 REMARK 465 SER B 0 REMARK 465 VAL B 1 REMARK 465 SER B 2 REMARK 465 LEU B 231 REMARK 465 GLY B 232 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 17 NH1 ARG B 122 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 303 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 172 OE2 REMARK 620 2 HIS A 139 O 102.6 REMARK 620 3 HOH A 668 O 81.7 136.9 REMARK 620 4 HOH A 516 O 153.4 103.9 80.8 REMARK 620 5 HOH A 427 O 107.3 67.4 152.9 80.8 REMARK 620 6 HOH A 521 O 70.0 68.3 73.4 123.0 133.6 REMARK 620 7 HOH A 590 O 134.9 76.0 71.7 55.9 113.0 67.9 REMARK 620 8 HOH A 488 O 88.4 140.7 81.6 69.4 73.3 148.8 121.6 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 305 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 139 O REMARK 620 2 GLY A 138 O 68.9 REMARK 620 3 HOH A 521 O 74.0 135.9 REMARK 620 4 HOH A 632 O 93.5 88.7 70.6 REMARK 620 5 HOH A 502 O 112.9 71.5 147.5 137.0 REMARK 620 6 HOH A 590 O 78.2 118.1 74.9 145.4 75.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A 304 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 205 O REMARK 620 2 SER B 205 O 92.6 REMARK 620 3 TYR A 145 O 88.6 176.2 REMARK 620 4 HOH A 432 O 72.8 109.8 74.0 REMARK 620 5 HOH B 317 O 130.7 71.4 105.1 156.4 REMARK 620 6 HOH B 319 O 60.8 114.1 63.4 115.7 83.1 REMARK 620 7 HOH A 448 O 137.1 101.2 80.2 64.3 92.2 140.4 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2Y0G RELATED DB: PDB REMARK 900 ENHANCED GREEN FLUORESCENT PROTEIN EGFP REMARK 900 RELATED ID: 4EUL RELATED DB: PDB REMARK 900 ENHANCED GREEN FLUORESCENT PROTEIN EGFP DBREF 4N3D A -11 232 UNP P42212 GFP_AEQVI 1 232 DBREF 4N3D B -11 232 UNP P42212 GFP_AEQVI 1 232 SEQADV 4N3D ARG A -10 UNP P42212 EXPRESSION TAG SEQADV 4N3D GLY A -9 UNP P42212 EXPRESSION TAG SEQADV 4N3D SER A -8 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -7 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -6 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -5 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -4 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -3 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS A -2 UNP P42212 EXPRESSION TAG SEQADV 4N3D GLY A -1 UNP P42212 EXPRESSION TAG SEQADV 4N3D SER A 0 UNP P42212 EXPRESSION TAG SEQADV 4N3D VAL A 1 UNP P42212 EXPRESSION TAG SEQADV 4N3D CRO A 65 UNP P42212 SER 65 CHROMOPHORE SEQADV 4N3D CRO A 65 UNP P42212 TYR 66 CHROMOPHORE SEQADV 4N3D CRO A 65 UNP P42212 GLY 67 CHROMOPHORE SEQADV 4N3D GLN A 162 UNP P42212 LYS 162 ENGINEERED MUTATION SEQADV 4N3D LEU A 231 UNP P42212 HIS 231 ENGINEERED MUTATION SEQADV 4N3D ARG B -10 UNP P42212 EXPRESSION TAG SEQADV 4N3D GLY B -9 UNP P42212 EXPRESSION TAG SEQADV 4N3D SER B -8 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -7 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -6 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -5 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -4 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -3 UNP P42212 EXPRESSION TAG SEQADV 4N3D HIS B -2 UNP P42212 EXPRESSION TAG SEQADV 4N3D GLY B -1 UNP P42212 EXPRESSION TAG SEQADV 4N3D SER B 0 UNP P42212 EXPRESSION TAG SEQADV 4N3D VAL B 1 UNP P42212 EXPRESSION TAG SEQADV 4N3D CRO B 65 UNP P42212 SER 65 CHROMOPHORE SEQADV 4N3D CRO B 65 UNP P42212 TYR 66 CHROMOPHORE SEQADV 4N3D CRO B 65 UNP P42212 GLY 67 CHROMOPHORE SEQADV 4N3D GLN B 162 UNP P42212 LYS 162 ENGINEERED MUTATION SEQADV 4N3D LEU B 231 UNP P42212 HIS 231 ENGINEERED MUTATION SEQRES 1 A 242 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 A 242 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 A 242 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 A 242 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 A 242 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 A 242 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL SEQRES 7 A 242 GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 A 242 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 A 242 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 A 242 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 A 242 ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP SEQRES 12 A 242 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR ASN SEQRES 13 A 242 SER HIS ASN VAL TYR ILE MET ALA ASP LYS GLN LYS ASN SEQRES 14 A 242 GLY ILE GLN VAL ASN PHE LYS ILE ARG HIS ASN ILE GLU SEQRES 15 A 242 ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 A 242 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 A 242 HIS TYR LEU SER THR GLN SER ALA LEU SER LYS ASP PRO SEQRES 18 A 242 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 A 242 THR ALA ALA GLY ILE THR LEU GLY SEQRES 1 B 242 MET ARG GLY SER HIS HIS HIS HIS HIS HIS GLY SER VAL SEQRES 2 B 242 SER LYS GLY GLU GLU LEU PHE THR GLY VAL VAL PRO ILE SEQRES 3 B 242 LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS PHE SEQRES 4 B 242 SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR GLY SEQRES 5 B 242 LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS LEU SEQRES 6 B 242 PRO VAL PRO TRP PRO THR LEU VAL THR THR LEU CRO VAL SEQRES 7 B 242 GLN CYS PHE SER ARG TYR PRO ASP HIS MET LYS GLN HIS SEQRES 8 B 242 ASP PHE PHE LYS SER ALA MET PRO GLU GLY TYR VAL GLN SEQRES 9 B 242 GLU ARG THR ILE PHE PHE LYS ASP ASP GLY ASN TYR LYS SEQRES 10 B 242 THR ARG ALA GLU VAL LYS PHE GLU GLY ASP THR LEU VAL SEQRES 11 B 242 ASN ARG ILE GLU LEU LYS GLY ILE ASP PHE LYS GLU ASP SEQRES 12 B 242 GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR ASN TYR ASN SEQRES 13 B 242 SER HIS ASN VAL TYR ILE MET ALA ASP LYS GLN LYS ASN SEQRES 14 B 242 GLY ILE GLN VAL ASN PHE LYS ILE ARG HIS ASN ILE GLU SEQRES 15 B 242 ASP GLY SER VAL GLN LEU ALA ASP HIS TYR GLN GLN ASN SEQRES 16 B 242 THR PRO ILE GLY ASP GLY PRO VAL LEU LEU PRO ASP ASN SEQRES 17 B 242 HIS TYR LEU SER THR GLN SER ALA LEU SER LYS ASP PRO SEQRES 18 B 242 ASN GLU LYS ARG ASP HIS MET VAL LEU LEU GLU PHE VAL SEQRES 19 B 242 THR ALA ALA GLY ILE THR LEU GLY MODRES 4N3D CRO A 65 GLY MODRES 4N3D CRO A 65 TYR MODRES 4N3D CRO A 65 GLY MODRES 4N3D CRO B 65 GLY MODRES 4N3D CRO B 65 TYR MODRES 4N3D CRO B 65 GLY HET CRO A 65 22 HET CRO B 65 22 HET PO4 A 301 5 HET PO4 A 302 5 HET K A 303 1 HET K A 304 1 HET K A 305 1 HET GOL A 306 6 HET GOL A 307 6 HET GOL A 308 6 HETNAM CRO {2-[(1R,2R)-1-AMINO-2-HYDROXYPROPYL]-4-(4- HETNAM 2 CRO HYDROXYBENZYLIDENE)-5-OXO-4,5-DIHYDRO-1H-IMIDAZOL-1- HETNAM 3 CRO YL}ACETIC ACID HETNAM PO4 PHOSPHATE ION HETNAM K POTASSIUM ION HETNAM GOL GLYCEROL HETSYN CRO PEPTIDE DERIVED CHROMOPHORE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 CRO 2(C15 H17 N3 O5) FORMUL 3 PO4 2(O4 P 3-) FORMUL 5 K 3(K 1+) FORMUL 8 GOL 3(C3 H8 O3) FORMUL 11 HOH *549(H2 O) HELIX 1 1 LYS A 3 THR A 9 5 7 HELIX 2 2 PRO A 56 VAL A 61 5 6 HELIX 3 3 VAL A 68 SER A 72 5 5 HELIX 4 4 PRO A 75 HIS A 81 5 7 HELIX 5 5 ASP A 82 ALA A 87 1 6 HELIX 6 6 LYS B 3 THR B 9 5 7 HELIX 7 7 PRO B 56 VAL B 61 5 6 HELIX 8 8 VAL B 68 SER B 72 5 5 HELIX 9 9 PRO B 75 HIS B 81 5 7 HELIX 10 10 ASP B 82 ALA B 87 1 6 SHEET 1 A12 VAL A 11 VAL A 22 0 SHEET 2 A12 HIS A 25 ASP A 36 -1 O PHE A 27 N GLY A 20 SHEET 3 A12 LYS A 41 CYS A 48 -1 O ILE A 47 N SER A 30 SHEET 4 A12 HIS A 217 ALA A 227 -1 O LEU A 220 N LEU A 44 SHEET 5 A12 HIS A 199 SER A 208 -1 N SER A 202 O THR A 225 SHEET 6 A12 HIS A 148 ALA A 154 -1 N ILE A 152 O HIS A 199 SHEET 7 A12 ILE A 161 ASN A 170 -1 O GLN A 162 N MET A 153 SHEET 8 A12 VAL A 176 PRO A 187 -1 O HIS A 181 N PHE A 165 SHEET 9 A12 TYR A 92 PHE A 100 -1 N GLU A 95 O GLN A 184 SHEET 10 A12 ASN A 105 GLU A 115 -1 O TYR A 106 N ILE A 98 SHEET 11 A12 THR A 118 ILE A 128 -1 O VAL A 120 N LYS A 113 SHEET 12 A12 VAL A 11 VAL A 22 1 N ASP A 21 O GLY A 127 SHEET 1 B12 VAL B 11 VAL B 22 0 SHEET 2 B12 HIS B 25 ASP B 36 -1 O PHE B 27 N GLY B 20 SHEET 3 B12 LYS B 41 CYS B 48 -1 O ILE B 47 N SER B 30 SHEET 4 B12 HIS B 217 ALA B 227 -1 O MET B 218 N PHE B 46 SHEET 5 B12 HIS B 199 SER B 208 -1 N TYR B 200 O ALA B 227 SHEET 6 B12 ASN B 149 ALA B 154 -1 N ILE B 152 O HIS B 199 SHEET 7 B12 ILE B 161 ASN B 170 -1 O GLN B 162 N MET B 153 SHEET 8 B12 VAL B 176 PRO B 187 -1 O HIS B 181 N PHE B 165 SHEET 9 B12 TYR B 92 PHE B 100 -1 N GLU B 95 O GLN B 184 SHEET 10 B12 ASN B 105 GLU B 115 -1 O TYR B 106 N ILE B 98 SHEET 11 B12 THR B 118 ILE B 128 -1 O VAL B 120 N LYS B 113 SHEET 12 B12 VAL B 11 VAL B 22 1 N ASP B 21 O GLY B 127 LINK OE2 GLU A 172 K K A 303 1555 1555 2.69 LINK O HIS A 139 K K A 303 1555 1555 2.74 LINK O HIS A 139 K K A 305 1555 1555 2.75 LINK O SER A 205 K K A 304 1555 1555 2.82 LINK O GLY A 138 K K A 305 1555 1555 2.86 LINK O SER B 205 K K A 304 1555 1555 2.92 LINK O TYR A 145 K K A 304 1555 1555 2.93 LINK K K A 304 O HOH A 432 1555 1555 2.69 LINK K K A 304 O HOH B 317 1555 1555 2.72 LINK K K A 303 O HOH A 668 1555 1555 2.75 LINK K K A 305 O HOH A 521 1555 1555 2.76 LINK K K A 305 O HOH A 632 1555 1555 2.81 LINK K K A 305 O HOH A 502 1555 1555 2.89 LINK K K A 304 O HOH B 319 1555 1555 2.98 LINK K K A 305 O HOH A 590 1555 1555 3.02 LINK K K A 303 O HOH A 516 1555 1555 3.04 LINK K K A 303 O HOH A 427 1555 1555 3.14 LINK K K A 303 O HOH A 521 1555 1555 3.15 LINK K K A 304 O HOH A 448 1555 1555 3.16 LINK K K A 303 O HOH A 590 1555 1555 3.16 LINK K K A 303 O HOH A 488 1555 1555 3.20 LINK C3 CRO B 65 N VAL B 68 1555 1555 1.33 LINK C3 CRO A 65 N VAL A 68 1555 1555 1.33 LINK C LEU A 64 N1 CRO A 65 1555 1555 1.34 LINK C LEU B 64 N1 CRO B 65 1555 1555 1.34 CISPEP 1 MET A 88 PRO A 89 0 6.88 CISPEP 2 MET B 88 PRO B 89 0 6.55 SITE 1 AC1 9 LYS A 101 ASP A 102 HOH A 453 HOH A 483 SITE 2 AC1 9 HOH A 502 HOH A 538 HOH A 563 HOH A 571 SITE 3 AC1 9 HOH A 650 SITE 1 AC2 5 ASN A 149 TYR A 151 HOH A 408 HOH A 501 SITE 2 AC2 5 HOH A 626 SITE 1 AC3 4 HIS A 139 GLU A 172 HOH A 516 HOH A 668 SITE 1 AC4 6 TYR A 145 SER A 205 HOH A 432 SER B 205 SITE 2 AC4 6 HOH B 317 HOH B 319 SITE 1 AC5 7 GLY A 138 HIS A 139 HOH A 502 HOH A 521 SITE 2 AC5 7 HOH A 571 HOH A 590 HOH A 632 SITE 1 AC6 6 ASP A 36 TYR A 39 GOL A 307 HOH A 628 SITE 2 AC6 6 HOH A 634 HOH A 678 SITE 1 AC7 4 ASP A 36 TYR A 39 GOL A 306 HOH A 678 SITE 1 AC8 7 GLY A 24 HIS A 25 LYS A 26 LYS A 107 SITE 2 AC8 7 HOH A 471 HOH A 474 HOH A 545 CRYST1 121.861 121.861 64.891 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008206 0.004738 0.000000 0.00000 SCALE2 0.000000 0.009476 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015410 0.00000