HEADER NUCLEAR PROTEIN/DNA 08-OCT-13 4N41 TITLE STRUCTURE OF THERMUS THERMOPHILUS ARGONAUTE BOUND TO GUIDE DNA AND 15- TITLE 2 MER TARGET DNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGONAUTE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: 5'-D(P*TP*GP*AP*GP*GP*TP*AP*GP*TP*AP*GP*GP*TP*T*GP*TP*AP*TP COMPND 7 *AP*GP*T)-3'; COMPND 8 CHAIN: C, E; COMPND 9 ENGINEERED: YES; COMPND 10 MOL_ID: 3; COMPND 11 MOLECULE: 5'-D(P*AP*CP*CP*TP*AP*CP*TP*AP*CP*CP*TP*CP*G)-3'; COMPND 12 CHAIN: D; COMPND 13 ENGINEERED: YES; COMPND 14 MOL_ID: 4; COMPND 15 MOLECULE: 5'-D(*AP*AP*CP*CP*TP*AP*CP*TP*GP*CP*CP*TP*CP*G)-3'; COMPND 16 CHAIN: F; COMPND 17 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMUS THERMOPHILUS; SOURCE 3 ORGANISM_TAXID: 274; SOURCE 4 STRAIN: THERMOPHILUS; SOURCE 5 GENE: ARGONAUTE, TT_P0026; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-SUMO; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 MOL_ID: 3; SOURCE 14 SYNTHETIC: YES; SOURCE 15 MOL_ID: 4; SOURCE 16 SYNTHETIC: YES KEYWDS ARGONAUTE, RNA INTERFERENCE, DNA INTERFERENCE, NUCLEAR PROTEIN-DNA KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR G.SHENG,H.ZHAO,J.WANG,Y.RAO,Y.WANG REVDAT 4 20-SEP-23 4N41 1 REMARK LINK REVDAT 3 15-NOV-17 4N41 1 REMARK REVDAT 2 29-JAN-14 4N41 1 JRNL REVDAT 1 15-JAN-14 4N41 0 JRNL AUTH G.SHENG,H.ZHAO,J.WANG,Y.RAO,W.TIAN,D.C.SWARTS, JRNL AUTH 2 J.VAN DER OOST,D.J.PATEL,Y.WANG JRNL TITL STRUCTURE-BASED CLEAVAGE MECHANISM OF THERMUS THERMOPHILUS JRNL TITL 2 ARGONAUTE DNA GUIDE STRAND-MEDIATED DNA TARGET CLEAVAGE. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 652 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 24374628 JRNL DOI 10.1073/PNAS.1321032111 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 45.52 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 86385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 4330 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 45.5337 - 6.9772 0.98 2756 156 0.1930 0.2093 REMARK 3 2 6.9772 - 5.5411 1.00 2762 168 0.2200 0.2601 REMARK 3 3 5.5411 - 4.8416 1.00 2773 147 0.2033 0.2346 REMARK 3 4 4.8416 - 4.3993 1.00 2760 135 0.1930 0.2062 REMARK 3 5 4.3993 - 4.0842 1.00 2714 170 0.1891 0.2160 REMARK 3 6 4.0842 - 3.8435 1.00 2760 150 0.2175 0.2473 REMARK 3 7 3.8435 - 3.6511 1.00 2726 153 0.2184 0.2536 REMARK 3 8 3.6511 - 3.4923 1.00 2740 130 0.2253 0.2842 REMARK 3 9 3.4923 - 3.3579 1.00 2789 126 0.2448 0.2662 REMARK 3 10 3.3579 - 3.2420 1.00 2756 128 0.2388 0.3080 REMARK 3 11 3.2420 - 3.1407 1.00 2742 134 0.2557 0.3100 REMARK 3 12 3.1407 - 3.0509 1.00 2763 139 0.2590 0.2625 REMARK 3 13 3.0509 - 2.9706 1.00 2691 152 0.2449 0.3095 REMARK 3 14 2.9706 - 2.8981 1.00 2760 144 0.2421 0.2737 REMARK 3 15 2.8981 - 2.8323 1.00 2690 154 0.2366 0.2616 REMARK 3 16 2.8323 - 2.7720 1.00 2795 136 0.2394 0.3389 REMARK 3 17 2.7720 - 2.7166 1.00 2687 155 0.2403 0.2847 REMARK 3 18 2.7166 - 2.6653 1.00 2762 133 0.2481 0.3341 REMARK 3 19 2.6653 - 2.6177 1.00 2732 125 0.2539 0.3537 REMARK 3 20 2.6177 - 2.5733 1.00 2713 153 0.2506 0.2780 REMARK 3 21 2.5733 - 2.5318 1.00 2792 137 0.2467 0.3030 REMARK 3 22 2.5318 - 2.4929 1.00 2695 148 0.2495 0.3111 REMARK 3 23 2.4929 - 2.4562 1.00 2720 150 0.2597 0.3625 REMARK 3 24 2.4562 - 2.4216 1.00 2737 154 0.2659 0.3451 REMARK 3 25 2.4216 - 2.3889 1.00 2688 147 0.2641 0.3100 REMARK 3 26 2.3889 - 2.3579 1.00 2726 136 0.2580 0.3003 REMARK 3 27 2.3579 - 2.3284 1.00 2761 149 0.2527 0.3007 REMARK 3 28 2.3284 - 2.3004 1.00 2721 128 0.2572 0.2795 REMARK 3 29 2.3004 - 2.2736 1.00 2722 152 0.2661 0.3091 REMARK 3 30 2.2736 - 2.2480 0.95 2622 141 0.2803 0.3273 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.290 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 28.920 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 49.72 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 68.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 11689 REMARK 3 ANGLE : 1.274 16151 REMARK 3 CHIRALITY : 0.060 1793 REMARK 3 PLANARITY : 0.006 1899 REMARK 3 DIHEDRAL : 15.564 4321 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 2 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A AND SEGID A REMARK 3 SELECTION : CHAIN B AND SEGID B REMARK 3 ATOM PAIRS NUMBER : 5333 REMARK 3 RMSD : NULL REMARK 3 NCS GROUP : 2 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN C AND SEGID C REMARK 3 SELECTION : CHAIN D AND SEGID D REMARK 3 ATOM PAIRS NUMBER : 504 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 2 REMARK 3 REFERENCE SELECTION: CHAIN C AND SEGID C REMARK 3 SELECTION : CHAIN E AND SEGID E REMARK 3 ATOM PAIRS NUMBER : 504 REMARK 3 RMSD : NULL REMARK 3 NCS OPERATOR : 3 REMARK 3 REFERENCE SELECTION: CHAIN C AND SEGID C REMARK 3 SELECTION : CHAIN F AND SEGID F REMARK 3 ATOM PAIRS NUMBER : 504 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4N41 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000082724. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 86435 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.248 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.77200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3F73 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.51 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.65 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.2 M SODIUM CHLORIDE, 0.1 M TRIS-HCL, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 306K, PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 50.84950 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6710 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31380 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -48.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31590 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -62.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 HIS A 3 REMARK 465 LEU A 4 REMARK 465 PRO A 36 REMARK 465 PRO A 37 REMARK 465 GLY A 38 REMARK 465 ARG A 39 REMARK 465 GLU A 40 REMARK 465 GLU A 41 REMARK 465 VAL A 42 REMARK 465 TYR A 43 REMARK 465 LEU A 215 REMARK 465 PRO A 216 REMARK 465 LEU A 217 REMARK 465 PRO A 218 REMARK 465 GLY A 219 REMARK 465 GLY A 220 REMARK 465 LEU A 221 REMARK 465 SER A 222 REMARK 465 GLY A 231 REMARK 465 ARG A 232 REMARK 465 LEU A 233 REMARK 465 GLU A 274 REMARK 465 GLY A 275 REMARK 465 SER A 276 REMARK 465 ASP A 497 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 HIS B 3 REMARK 465 LEU B 4 REMARK 465 GLU B 272 REMARK 465 GLU B 273 REMARK 465 GLU B 274 REMARK 465 GLY B 275 REMARK 465 GLY B 495 REMARK 465 GLY B 496 REMARK 465 ASP B 497 REMARK 465 GLY B 498 REMARK 465 GLY B 499 REMARK 465 ARG B 672 REMARK 465 HIS B 673 REMARK 465 LEU B 674 REMARK 465 LYS B 675 REMARK 465 GLU B 676 REMARK 465 DT C 19 REMARK 465 DA C 22 REMARK 465 DT C 23 REMARK 465 DA C 24 REMARK 465 DG C 25 REMARK 465 DT C 26 REMARK 465 DG E 15 REMARK 465 DT E 16 REMARK 465 DA E 17 REMARK 465 DT E 18 REMARK 465 DA E 19 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 28 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 30 CG CD OE1 OE2 REMARK 470 VAL A 31 CG1 CG2 REMARK 470 LEU A 33 CG CD1 CD2 REMARK 470 ASP A 34 CG OD1 OD2 REMARK 470 LEU A 45 CG CD1 CD2 REMARK 470 VAL A 74 CG1 CG2 REMARK 470 GLU A 76 CG CD OE1 OE2 REMARK 470 LEU A 79 CG CD1 CD2 REMARK 470 ARG A 81 CG CD NE CZ NH1 NH2 REMARK 470 MET A 82 CG SD CE REMARK 470 GLN A 84 CG CD OE1 NE2 REMARK 470 TYR A 86 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR A 88 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ARG A 89 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 90 CG CD1 CD2 REMARK 470 TYR A 91 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 107 OG REMARK 470 ARG A 122 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 123 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 125 CG CD OE1 OE2 REMARK 470 PRO A 143 CG CD REMARK 470 GLN A 185 CG CD OE1 NE2 REMARK 470 LYS A 191 CG CD CE NZ REMARK 470 ARG A 199 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 200 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 203 CG CD OE1 OE2 REMARK 470 LEU A 205 CG CD1 CD2 REMARK 470 ARG A 206 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 209 CG CD OE1 OE2 REMARK 470 GLU A 210 CG CD OE1 OE2 REMARK 470 ASP A 211 CG OD1 OD2 REMARK 470 PRO A 212 CG CD REMARK 470 LYS A 213 CG CD CE NZ REMARK 470 GLU A 214 CG CD OE1 OE2 REMARK 470 LEU A 223 CG CD1 CD2 REMARK 470 LEU A 224 CG CD1 CD2 REMARK 470 TYR A 226 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 SER A 229 OG REMARK 470 LYS A 230 CG CD CE NZ REMARK 470 GLN A 234 CG CD OE1 NE2 REMARK 470 ARG A 236 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 237 CG CD OE1 OE2 REMARK 470 ARG A 240 CG CD NE CZ NH1 NH2 REMARK 470 PRO A 247 CG CD REMARK 470 LYS A 248 CG CD CE NZ REMARK 470 ASP A 249 CG OD1 OD2 REMARK 470 PRO A 250 CG CD REMARK 470 ARG A 251 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 257 CG CD1 CD2 REMARK 470 LEU A 260 CG CD1 CD2 REMARK 470 GLU A 272 CG CD OE1 OE2 REMARK 470 LEU A 277 CG CD1 CD2 REMARK 470 LYS A 320 CG CD CE NZ REMARK 470 ARG A 367 CG CD NE CZ NH1 NH2 REMARK 470 SER A 386 OG REMARK 470 GLU A 507 CG CD OE1 OE2 REMARK 470 GLN A 509 CG CD OE1 NE2 REMARK 470 GLN A 585 CG CD OE1 NE2 REMARK 470 ASP A 598 CG OD1 OD2 REMARK 470 ARG A 672 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 675 CG CD CE NZ REMARK 470 GLU B 40 CG CD OE1 OE2 REMARK 470 GLU B 41 CG CD OE1 OE2 REMARK 470 MET B 82 CG SD CE REMARK 470 SER B 107 OG REMARK 470 ARG B 122 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 125 CG CD OE1 OE2 REMARK 470 VAL B 127 CG1 CG2 REMARK 470 PRO B 143 CG CD REMARK 470 LEU B 189 CG CD1 CD2 REMARK 470 LYS B 191 CG CD CE NZ REMARK 470 ARG B 192 CG CD NE CZ NH1 NH2 REMARK 470 VAL B 193 CG1 CG2 REMARK 470 ARG B 199 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 200 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 203 CG CD OE1 OE2 REMARK 470 LEU B 205 CG CD1 CD2 REMARK 470 ARG B 206 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 209 CG CD OE1 OE2 REMARK 470 GLU B 210 CG CD OE1 OE2 REMARK 470 ASP B 211 CG OD1 OD2 REMARK 470 PRO B 212 CG CD REMARK 470 LYS B 213 CG CD CE NZ REMARK 470 GLU B 214 CG CD OE1 OE2 REMARK 470 LEU B 215 CG CD1 CD2 REMARK 470 PRO B 218 CG CD REMARK 470 SER B 222 OG REMARK 470 LEU B 223 CG CD1 CD2 REMARK 470 LEU B 224 CG CD1 CD2 REMARK 470 SER B 229 OG REMARK 470 GLN B 234 CG CD OE1 NE2 REMARK 470 ARG B 236 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 237 CG CD OE1 OE2 REMARK 470 ARG B 240 CG CD NE CZ NH1 NH2 REMARK 470 PRO B 247 CG CD REMARK 470 LYS B 248 CG CD CE NZ REMARK 470 ASP B 249 CG OD1 OD2 REMARK 470 PRO B 250 CG CD REMARK 470 LYS B 252 CG CD CE NZ REMARK 470 LEU B 265 CG CD1 CD2 REMARK 470 HIS B 271 CG ND1 CD2 CE1 NE2 REMARK 470 SER B 276 OG REMARK 470 LEU B 277 CG CD1 CD2 REMARK 470 ILE B 297 CG1 CG2 CD1 REMARK 470 ARG B 324 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 325 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 340 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 367 CG CD NE CZ NH1 NH2 REMARK 470 SER B 386 OG REMARK 470 HIS B 500 CG ND1 CD2 CE1 NE2 REMARK 470 GLU B 507 CG CD OE1 OE2 REMARK 470 GLN B 509 CG CD OE1 NE2 REMARK 470 GLN B 585 CG CD OE1 NE2 REMARK 470 DG C 20 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ASP A 246 O ASP A 249 2.01 REMARK 500 NH2 ARG A 545 O VAL A 549 2.11 REMARK 500 NH2 ARG B 545 O VAL B 549 2.11 REMARK 500 NH2 ARG A 350 OD1 ASP A 352 2.16 REMARK 500 NH2 ARG A 335 O HOH A 772 2.17 REMARK 500 O HOH A 806 O HOH A 818 2.17 REMARK 500 OD2 ASP A 590 N1 DG D 15 2.18 REMARK 500 OP1 DA C 7 O HOH C 202 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DT C 1 P DT C 1 OP3 -0.120 REMARK 500 DG C 8 O3' DG C 8 C3' -0.047 REMARK 500 DT E 1 P DT E 1 OP3 -0.129 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 143 N - CA - CB ANGL. DEV. = 9.1 DEGREES REMARK 500 ASP A 249 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 ARG A 640 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 PRO B 143 N - CA - CB ANGL. DEV. = 7.6 DEGREES REMARK 500 PRO B 218 N - CA - CB ANGL. DEV. = 7.5 DEGREES REMARK 500 PRO B 247 N - CA - CB ANGL. DEV. = 7.2 DEGREES REMARK 500 DT C 1 OP1 - P - OP2 ANGL. DEV. = -10.2 DEGREES REMARK 500 DT C 1 O4' - C1' - N1 ANGL. DEV. = -4.8 DEGREES REMARK 500 DG C 2 O5' - C5' - C4' ANGL. DEV. = -7.7 DEGREES REMARK 500 DG C 5 O5' - C5' - C4' ANGL. DEV. = -5.5 DEGREES REMARK 500 DT C 6 O4' - C1' - N1 ANGL. DEV. = 4.7 DEGREES REMARK 500 DA C 7 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 DA C 10 O4' - C1' - N9 ANGL. DEV. = 3.2 DEGREES REMARK 500 DG C 11 O4' - C4' - C3' ANGL. DEV. = -2.5 DEGREES REMARK 500 DG C 11 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT C 13 O4' - C1' - N1 ANGL. DEV. = 5.0 DEGREES REMARK 500 DT E 1 OP1 - P - OP2 ANGL. DEV. = -12.7 DEGREES REMARK 500 DG E 5 O5' - C5' - C4' ANGL. DEV. = -6.2 DEGREES REMARK 500 DT E 9 O4' - C1' - N1 ANGL. DEV. = 1.9 DEGREES REMARK 500 DA E 10 O4' - C4' - C3' ANGL. DEV. = -4.2 DEGREES REMARK 500 DT E 13 O4' - C1' - N1 ANGL. DEV. = 1.8 DEGREES REMARK 500 DA D 3 O4' - C1' - N9 ANGL. DEV. = 2.5 DEGREES REMARK 500 DC D 4 O4' - C1' - N1 ANGL. DEV. = 6.5 DEGREES REMARK 500 DC D 5 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT D 6 O4' - C1' - N1 ANGL. DEV. = 4.1 DEGREES REMARK 500 DA D 7 O4' - C1' - N9 ANGL. DEV. = 3.3 DEGREES REMARK 500 DC D 11 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT D 13 O4' - C1' - N1 ANGL. DEV. = 2.2 DEGREES REMARK 500 DG D 15 O4' - C1' - N9 ANGL. DEV. = -5.8 DEGREES REMARK 500 DA F 3 O4' - C1' - N9 ANGL. DEV. = 3.8 DEGREES REMARK 500 DC F 4 O5' - C5' - C4' ANGL. DEV. = -5.4 DEGREES REMARK 500 DC F 4 O4' - C1' - N1 ANGL. DEV. = 2.5 DEGREES REMARK 500 DT F 6 O4' - C1' - N1 ANGL. DEV. = 4.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 382 64.18 -103.45 REMARK 500 LEU A 596 -142.56 -120.16 REMARK 500 ASN B 12 32.01 -94.16 REMARK 500 PRO B 92 109.31 -54.44 REMARK 500 LEU B 596 -140.89 -117.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA A 508 GLN A 509 132.59 REMARK 500 GLU A 597 ASP A 598 -137.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL A 685 OXT REMARK 620 2 VAL A 685 O 55.9 REMARK 620 3 HOH A 735 O 95.5 97.2 REMARK 620 4 DT C 1 OP3 154.7 101.4 98.7 REMARK 620 5 DA C 3 OP1 86.0 141.2 93.3 113.8 REMARK 620 6 HOH C 205 O 85.5 82.4 178.4 79.9 87.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 478 OD1 REMARK 620 2 ASP B 478 OD2 53.0 REMARK 620 3 ASP B 660 OD2 81.1 109.1 REMARK 620 4 HOH B 808 O 67.8 104.6 102.4 REMARK 620 5 DT F 6 OP1 126.6 170.5 79.4 68.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG E 101 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 VAL B 685 OXT REMARK 620 2 VAL B 685 O 60.2 REMARK 620 3 DT E 1 OP3 166.2 110.2 REMARK 620 4 DA E 3 OP1 94.6 152.1 92.1 REMARK 620 5 HOH E 203 O 89.8 89.0 79.8 78.4 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG E 101 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3DLH RELATED DB: PDB REMARK 900 RELATED ID: 3HVR RELATED DB: PDB REMARK 900 RELATED ID: 3HM9 RELATED DB: PDB REMARK 900 RELATED ID: 4N47 RELATED DB: PDB REMARK 900 RELATED ID: 4N76 RELATED DB: PDB REMARK 900 RELATED ID: 4NCA RELATED DB: PDB REMARK 900 RELATED ID: 4NCB RELATED DB: PDB DBREF 4N41 A 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 4N41 B 1 685 UNP Q746M7 Q746M7_THET2 1 685 DBREF 4N41 C 1 26 PDB 4N41 4N41 1 26 DBREF 4N41 E 1 21 PDB 4N41 4N41 1 21 DBREF 4N41 D 3 15 PDB 4N41 4N41 3 15 DBREF 4N41 F 2 15 PDB 4N41 4N41 2 15 SEQRES 1 A 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 A 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 A 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 A 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 A 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 A 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 A 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 A 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 A 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 A 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 A 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 A 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 A 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 A 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 A 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 A 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 A 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 A 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 A 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 A 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 A 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 A 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 A 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 A 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 A 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 A 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 A 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 A 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 A 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 A 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 A 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 A 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 A 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 A 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 A 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 A 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 A 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 A 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 A 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 A 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 A 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 A 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 A 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 A 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 A 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 A 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 A 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 A 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 A 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 A 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 A 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 A 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 A 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 B 685 MET ASN HIS LEU GLY LYS THR GLU VAL PHE LEU ASN ARG SEQRES 2 B 685 PHE ALA LEU ARG PRO LEU ASN PRO GLU GLU LEU ARG PRO SEQRES 3 B 685 TRP ARG LEU GLU VAL VAL LEU ASP PRO PRO PRO GLY ARG SEQRES 4 B 685 GLU GLU VAL TYR PRO LEU LEU ALA GLN VAL ALA ARG ARG SEQRES 5 B 685 ALA GLY GLY VAL THR VAL ARG MET GLY ASP GLY LEU ALA SEQRES 6 B 685 SER TRP SER PRO PRO GLU VAL LEU VAL LEU GLU GLY THR SEQRES 7 B 685 LEU ALA ARG MET GLY GLN THR TYR ALA TYR ARG LEU TYR SEQRES 8 B 685 PRO LYS GLY ARG ARG PRO LEU ASP PRO LYS ASP PRO GLY SEQRES 9 B 685 GLU ARG SER VAL LEU SER ALA LEU ALA ARG ARG LEU LEU SEQRES 10 B 685 GLN GLU ARG LEU ARG ARG LEU GLU GLY VAL TRP VAL GLU SEQRES 11 B 685 GLY LEU ALA VAL TYR ARG ARG GLU HIS ALA ARG GLY PRO SEQRES 12 B 685 GLY TRP ARG VAL LEU GLY GLY ALA VAL LEU ASP LEU TRP SEQRES 13 B 685 VAL SER ASP SER GLY ALA PHE LEU LEU GLU VAL ASP PRO SEQRES 14 B 685 ALA TYR ARG ILE LEU CYS GLU MET SER LEU GLU ALA TRP SEQRES 15 B 685 LEU ALA GLN GLY HIS PRO LEU PRO LYS ARG VAL ARG ASN SEQRES 16 B 685 ALA TYR ASP ARG ARG THR TRP GLU LEU LEU ARG LEU GLY SEQRES 17 B 685 GLU GLU ASP PRO LYS GLU LEU PRO LEU PRO GLY GLY LEU SEQRES 18 B 685 SER LEU LEU ASP TYR HIS ALA SER LYS GLY ARG LEU GLN SEQRES 19 B 685 GLY ARG GLU GLY GLY ARG VAL ALA TRP VAL ALA ASP PRO SEQRES 20 B 685 LYS ASP PRO ARG LYS PRO ILE PRO HIS LEU THR GLY LEU SEQRES 21 B 685 LEU VAL PRO VAL LEU THR LEU GLU ASP LEU HIS GLU GLU SEQRES 22 B 685 GLU GLY SER LEU ALA LEU SER LEU PRO TRP GLU GLU ARG SEQRES 23 B 685 ARG ARG ARG THR ARG GLU ILE ALA SER TRP ILE GLY ARG SEQRES 24 B 685 ARG LEU GLY LEU GLY THR PRO GLU ALA VAL ARG ALA GLN SEQRES 25 B 685 ALA TYR ARG LEU SER ILE PRO LYS LEU MET GLY ARG ARG SEQRES 26 B 685 ALA VAL SER LYS PRO ALA ASP ALA LEU ARG VAL GLY PHE SEQRES 27 B 685 TYR ARG ALA GLN GLU THR ALA LEU ALA LEU LEU ARG LEU SEQRES 28 B 685 ASP GLY ALA GLN GLY TRP PRO GLU PHE LEU ARG ARG ALA SEQRES 29 B 685 LEU LEU ARG ALA PHE GLY ALA SER GLY ALA SER LEU ARG SEQRES 30 B 685 LEU HIS THR LEU HIS ALA HIS PRO SER GLN GLY LEU ALA SEQRES 31 B 685 PHE ARG GLU ALA LEU ARG LYS ALA LYS GLU GLU GLY VAL SEQRES 32 B 685 GLN ALA VAL LEU VAL LEU THR PRO PRO MET ALA TRP GLU SEQRES 33 B 685 ASP ARG ASN ARG LEU LYS ALA LEU LEU LEU ARG GLU GLY SEQRES 34 B 685 LEU PRO SER GLN ILE LEU ASN VAL PRO LEU ARG GLU GLU SEQRES 35 B 685 GLU ARG HIS ARG TRP GLU ASN ALA LEU LEU GLY LEU LEU SEQRES 36 B 685 ALA LYS ALA GLY LEU GLN VAL VAL ALA LEU SER GLY ALA SEQRES 37 B 685 TYR PRO ALA GLU LEU ALA VAL GLY PHE ASP ALA GLY GLY SEQRES 38 B 685 ARG GLU SER PHE ARG PHE GLY GLY ALA ALA CYS ALA VAL SEQRES 39 B 685 GLY GLY ASP GLY GLY HIS LEU LEU TRP THR LEU PRO GLU SEQRES 40 B 685 ALA GLN ALA GLY GLU ARG ILE PRO GLN GLU VAL VAL TRP SEQRES 41 B 685 ASP LEU LEU GLU GLU THR LEU TRP ALA PHE ARG ARG LYS SEQRES 42 B 685 ALA GLY ARG LEU PRO SER ARG VAL LEU LEU LEU ARG ASP SEQRES 43 B 685 GLY ARG VAL PRO GLN ASP GLU PHE ALA LEU ALA LEU GLU SEQRES 44 B 685 ALA LEU ALA ARG GLU GLY ILE ALA TYR ASP LEU VAL SER SEQRES 45 B 685 VAL ARG LYS SER GLY GLY GLY ARG VAL TYR PRO VAL GLN SEQRES 46 B 685 GLY ARG LEU ALA ASP GLY LEU TYR VAL PRO LEU GLU ASP SEQRES 47 B 685 LYS THR PHE LEU LEU LEU THR VAL HIS ARG ASP PHE ARG SEQRES 48 B 685 GLY THR PRO ARG PRO LEU LYS LEU VAL HIS GLU ALA GLY SEQRES 49 B 685 ASP THR PRO LEU GLU ALA LEU ALA HIS GLN ILE PHE HIS SEQRES 50 B 685 LEU THR ARG LEU TYR PRO ALA SER GLY PHE ALA PHE PRO SEQRES 51 B 685 ARG LEU PRO ALA PRO LEU HIS LEU ALA ASP ARG LEU VAL SEQRES 52 B 685 LYS GLU VAL GLY ARG LEU GLY ILE ARG HIS LEU LYS GLU SEQRES 53 B 685 VAL ASP ARG GLU LYS LEU PHE PHE VAL SEQRES 1 C 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 C 21 DT DG DT DA DT DA DG DT SEQRES 1 E 21 DT DG DA DG DG DT DA DG DT DA DG DG DT SEQRES 2 E 21 DT DG DT DA DT DA DG DT SEQRES 1 D 13 DA DC DC DT DA DC DT DA DC DC DT DC DG SEQRES 1 F 14 DA DA DC DC DT DA DC DT DA DC DC DT DC SEQRES 2 F 14 DG HET MG B 701 1 HET MG C 101 1 HET MG E 101 1 HETNAM MG MAGNESIUM ION FORMUL 7 MG 3(MG 2+) FORMUL 10 HOH *170(H2 O) HELIX 1 1 ASN A 20 ARG A 25 1 6 HELIX 2 2 LEU A 45 GLY A 54 1 10 HELIX 3 3 PRO A 69 LEU A 73 5 5 HELIX 4 4 ASP A 102 ARG A 123 1 22 HELIX 5 5 SER A 178 ALA A 184 1 7 HELIX 6 6 LEU A 224 SER A 229 1 6 HELIX 7 7 PRO A 282 GLY A 302 1 21 HELIX 8 8 LYS A 329 ALA A 331 5 3 HELIX 9 9 ASP A 332 GLY A 337 1 6 HELIX 10 10 PRO A 358 SER A 372 1 15 HELIX 11 11 HIS A 384 GLN A 387 5 4 HELIX 12 12 GLY A 388 GLU A 401 1 14 HELIX 13 13 ALA A 414 GLU A 428 1 15 HELIX 14 14 GLU A 443 ALA A 458 1 16 HELIX 15 15 ILE A 514 GLY A 535 1 22 HELIX 16 16 PRO A 550 GLU A 553 5 4 HELIX 17 17 PHE A 554 GLU A 564 1 11 HELIX 18 18 ARG A 608 GLY A 612 5 5 HELIX 19 19 PRO A 627 THR A 639 1 13 HELIX 20 20 PRO A 653 GLY A 670 1 18 HELIX 21 21 GLU B 41 GLY B 54 1 14 HELIX 22 22 PRO B 69 LEU B 73 5 5 HELIX 23 23 ASP B 102 ARG B 123 1 22 HELIX 24 24 SER B 178 GLN B 185 1 8 HELIX 25 25 SER B 222 SER B 229 1 8 HELIX 26 26 PRO B 282 GLY B 302 1 21 HELIX 27 27 LYS B 329 ALA B 331 5 3 HELIX 28 28 ASP B 332 GLY B 337 1 6 HELIX 29 29 PRO B 358 GLY B 373 1 16 HELIX 30 30 HIS B 384 GLN B 387 5 4 HELIX 31 31 GLY B 388 GLY B 402 1 15 HELIX 32 32 ALA B 414 GLU B 428 1 15 HELIX 33 33 GLU B 443 ALA B 458 1 16 HELIX 34 34 SER B 484 GLY B 488 5 5 HELIX 35 35 ILE B 514 ALA B 534 1 21 HELIX 36 36 PRO B 550 GLU B 553 5 4 HELIX 37 37 PHE B 554 GLU B 564 1 11 HELIX 38 38 PRO B 627 THR B 639 1 13 HELIX 39 39 ARG B 640 TYR B 642 5 3 HELIX 40 40 PRO B 653 GLY B 670 1 18 SHEET 1 A14 TRP A 128 GLU A 130 0 SHEET 2 A14 ALA A 133 ARG A 141 -1 O ALA A 133 N GLU A 130 SHEET 3 A14 TRP A 145 VAL A 157 -1 O VAL A 147 N HIS A 139 SHEET 4 A14 ALA A 162 CYS A 175 -1 O LEU A 174 N ARG A 146 SHEET 5 A14 LYS A 6 PRO A 18 -1 N PHE A 14 O LEU A 165 SHEET 6 A14 GLU A 307 ARG A 315 -1 O GLU A 307 N ALA A 15 SHEET 7 A14 LEU A 592 PRO A 595 -1 O TYR A 593 N TYR A 314 SHEET 8 A14 THR A 600 LEU A 604 -1 O LEU A 604 N LEU A 592 SHEET 9 A14 LEU A 617 ALA A 623 -1 O LEU A 619 N PHE A 601 SHEET 10 A14 ALA A 567 ARG A 574 -1 N ARG A 574 O LYS A 618 SHEET 11 A14 ARG A 540 ARG A 545 1 N ARG A 545 O VAL A 573 SHEET 12 A14 LEU A 473 ASP A 478 1 N VAL A 475 O LEU A 544 SHEET 13 A14 ALA A 490 GLY A 495 -1 O VAL A 494 N ALA A 474 SHEET 14 A14 LEU A 501 THR A 504 -1 O LEU A 502 N ALA A 493 SHEET 1 B 6 TRP A 128 GLU A 130 0 SHEET 2 B 6 ALA A 133 ARG A 141 -1 O ALA A 133 N GLU A 130 SHEET 3 B 6 TRP A 145 VAL A 157 -1 O VAL A 147 N HIS A 139 SHEET 4 B 6 ALA A 162 CYS A 175 -1 O LEU A 174 N ARG A 146 SHEET 5 B 6 LYS A 6 PRO A 18 -1 N PHE A 14 O LEU A 165 SHEET 6 B 6 VAL A 581 PRO A 583 -1 O TYR A 582 N PHE A 10 SHEET 1 C 4 THR A 57 MET A 60 0 SHEET 2 C 4 GLY A 63 SER A 66 -1 O GLY A 63 N MET A 60 SHEET 3 C 4 TRP A 27 VAL A 32 -1 N TRP A 27 O SER A 66 SHEET 4 C 4 ARG A 89 ARG A 95 -1 O TYR A 91 N GLU A 30 SHEET 1 D 5 PRO A 253 LEU A 257 0 SHEET 2 D 5 VAL A 241 ALA A 245 -1 N ALA A 242 O HIS A 256 SHEET 3 D 5 THR A 201 GLY A 208 -1 N ARG A 206 O TRP A 243 SHEET 4 D 5 ARG A 192 ASN A 195 -1 N VAL A 193 O TRP A 202 SHEET 5 D 5 LEU A 261 PRO A 263 -1 O VAL A 262 N ARG A 194 SHEET 1 E 2 LEU A 321 MET A 322 0 SHEET 2 E 2 ALA A 464 LEU A 465 -1 O ALA A 464 N MET A 322 SHEET 1 F 4 LEU A 376 THR A 380 0 SHEET 2 F 4 THR A 344 ARG A 350 1 N LEU A 346 O HIS A 379 SHEET 3 F 4 ALA A 405 THR A 410 1 O LEU A 407 N LEU A 349 SHEET 4 F 4 SER A 432 ASN A 436 1 O GLN A 433 N VAL A 408 SHEET 1 G14 TRP B 128 GLU B 130 0 SHEET 2 G14 ALA B 133 ARG B 141 -1 O ALA B 133 N GLU B 130 SHEET 3 G14 TRP B 145 VAL B 157 -1 O VAL B 147 N HIS B 139 SHEET 4 G14 ALA B 162 CYS B 175 -1 O LEU B 174 N ARG B 146 SHEET 5 G14 LYS B 6 PRO B 18 -1 N PHE B 14 O LEU B 165 SHEET 6 G14 GLU B 307 ARG B 315 -1 O GLU B 307 N ALA B 15 SHEET 7 G14 LEU B 592 PRO B 595 -1 O TYR B 593 N TYR B 314 SHEET 8 G14 THR B 600 LEU B 604 -1 O LEU B 602 N VAL B 594 SHEET 9 G14 LEU B 617 ALA B 623 -1 O LEU B 619 N PHE B 601 SHEET 10 G14 ALA B 567 ARG B 574 -1 N ARG B 574 O LYS B 618 SHEET 11 G14 ARG B 540 ARG B 545 1 N LEU B 543 O ASP B 569 SHEET 12 G14 LEU B 473 ASP B 478 1 N VAL B 475 O LEU B 544 SHEET 13 G14 ALA B 490 VAL B 494 -1 O CYS B 492 N GLY B 476 SHEET 14 G14 LEU B 502 THR B 504 -1 O THR B 504 N ALA B 491 SHEET 1 H 6 TRP B 128 GLU B 130 0 SHEET 2 H 6 ALA B 133 ARG B 141 -1 O ALA B 133 N GLU B 130 SHEET 3 H 6 TRP B 145 VAL B 157 -1 O VAL B 147 N HIS B 139 SHEET 4 H 6 ALA B 162 CYS B 175 -1 O LEU B 174 N ARG B 146 SHEET 5 H 6 LYS B 6 PRO B 18 -1 N PHE B 14 O LEU B 165 SHEET 6 H 6 VAL B 581 PRO B 583 -1 O TYR B 582 N PHE B 10 SHEET 1 I 5 THR B 57 MET B 60 0 SHEET 2 I 5 GLY B 63 SER B 66 -1 O ALA B 65 N VAL B 58 SHEET 3 I 5 TRP B 27 ASP B 34 -1 N LEU B 29 O LEU B 64 SHEET 4 I 5 GLN B 84 ARG B 95 -1 O GLY B 94 N ARG B 28 SHEET 5 I 5 GLU B 76 ARG B 81 -1 N ARG B 81 O GLN B 84 SHEET 1 J 5 ASP B 249 LEU B 257 0 SHEET 2 J 5 VAL B 241 ASP B 246 -1 N VAL B 244 O ILE B 254 SHEET 3 J 5 THR B 201 GLY B 208 -1 N GLU B 203 O ALA B 245 SHEET 4 J 5 ARG B 192 ASN B 195 -1 N VAL B 193 O TRP B 202 SHEET 5 J 5 LEU B 261 VAL B 264 -1 O VAL B 262 N ARG B 194 SHEET 1 K 2 LEU B 321 MET B 322 0 SHEET 2 K 2 ALA B 464 LEU B 465 -1 O ALA B 464 N MET B 322 SHEET 1 L 4 LEU B 376 THR B 380 0 SHEET 2 L 4 THR B 344 ARG B 350 1 N LEU B 346 O HIS B 379 SHEET 3 L 4 ALA B 405 THR B 410 1 O LEU B 407 N ALA B 347 SHEET 4 L 4 SER B 432 ASN B 436 1 O GLN B 433 N VAL B 408 LINK OXT VAL A 685 MG MG C 101 1555 1555 2.28 LINK O VAL A 685 MG MG C 101 1555 1555 2.28 LINK O HOH A 735 MG MG C 101 1555 1555 2.01 LINK OD1 ASP B 478 MG MG B 701 1555 1555 2.33 LINK OD2 ASP B 478 MG MG B 701 1555 1555 2.51 LINK OD2 ASP B 660 MG MG B 701 1555 1555 2.20 LINK OXT VAL B 685 MG MG E 101 1555 1555 2.00 LINK O VAL B 685 MG MG E 101 1555 1555 2.19 LINK MG MG B 701 O HOH B 808 1555 1555 2.07 LINK MG MG B 701 OP1 DT F 6 1555 1555 2.61 LINK OP3 DT C 1 MG MG C 101 1555 1555 1.92 LINK OP1 DA C 3 MG MG C 101 1555 1555 1.98 LINK MG MG C 101 O HOH C 205 1555 1555 2.03 LINK OP3 DT E 1 MG MG E 101 1555 1555 1.97 LINK OP1 DA E 3 MG MG E 101 1555 1555 2.04 LINK MG MG E 101 O HOH E 203 1555 1555 2.09 CISPEP 1 ASP A 34 PRO A 35 0 -4.08 CISPEP 2 GLY A 142 PRO A 143 0 -4.37 CISPEP 3 VAL A 437 PRO A 438 0 2.97 CISPEP 4 ASP B 34 PRO B 35 0 3.47 CISPEP 5 GLY B 142 PRO B 143 0 -6.12 SITE 1 AC1 5 ASP B 478 ALA B 479 ASP B 660 HOH B 808 SITE 2 AC1 5 DT F 6 SITE 1 AC2 5 VAL A 685 HOH A 735 DT C 1 DA C 3 SITE 2 AC2 5 HOH C 205 SITE 1 AC3 4 VAL B 685 DT E 1 DA E 3 HOH E 203 CRYST1 59.513 101.699 153.019 90.00 93.52 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016803 0.000000 0.001034 0.00000 SCALE2 0.000000 0.009833 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006547 0.00000