HEADER TRANSPORT PROTEIN 08-OCT-13 4N4U TITLE CRYSTAL STRUCTURE OF ABC TRANSPORTER SOLUTE BINDING PROTEIN BB0719 TITLE 2 FROM BORDETELLA BRONCHISEPTICA RB50, TARGET EFI-510049 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE ABC TRANSPORTER PERIPLASMIC SOLUTE-BINDING COMPND 3 PROTEIN; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: ABC TRANSPORTER PERIPLASMIC SOLUTE BINDING PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BORDETELLA BRONCHISEPTICA; SOURCE 3 ORGANISM_TAXID: 257310; SOURCE 4 STRAIN: RB50; SOURCE 5 GENE: BB0719; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS ABC PERIPLASMIC SOLUTE BINDING FAMILY, ENZYME FUNCTION INITIATIVE, KEYWDS 2 EFI, STRUCTURAL GENOMICS, TRANSPORT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.PATSKOVSKY,M.W.VETTING,R.TORO,R.BHOSLE,N.AL OBAIDI,M.STEAD, AUTHOR 2 E.WASHINGTON,A.SCOTT GLENN,S.CHOWDHURY,B.EVANS,J.HAMMONDS, AUTHOR 3 B.HILLERICH,J.LOVE,R.D.SEIDEL,H.J.IMKER,M.P.JACOBSON,J.A.GERLT, AUTHOR 4 S.C.ALMO,ENZYME FUNCTION INITIATIVE (EFI) REVDAT 4 28-FEB-24 4N4U 1 REMARK SEQADV REVDAT 3 24-JAN-18 4N4U 1 AUTHOR REVDAT 2 25-FEB-15 4N4U 1 JRNL REVDAT 1 23-OCT-13 4N4U 0 JRNL AUTH M.W.VETTING,N.AL-OBAIDI,S.ZHAO,B.SAN FRANCISCO,J.KIM, JRNL AUTH 2 D.J.WICHELECKI,J.T.BOUVIER,J.O.SOLBIATI,H.VU,X.ZHANG, JRNL AUTH 3 D.A.RODIONOV,J.D.LOVE,B.S.HILLERICH,R.D.SEIDEL,R.J.QUINN, JRNL AUTH 4 A.L.OSTERMAN,J.E.CRONAN,M.P.JACOBSON,J.A.GERLT,S.C.ALMO JRNL TITL EXPERIMENTAL STRATEGIES FOR FUNCTIONAL ANNOTATION AND JRNL TITL 2 METABOLISM DISCOVERY: TARGETED SCREENING OF SOLUTE BINDING JRNL TITL 3 PROTEINS AND UNBIASED PANNING OF METABOLOMES. JRNL REF BIOCHEMISTRY V. 54 909 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 25540822 JRNL DOI 10.1021/BI501388Y REMARK 2 REMARK 2 RESOLUTION. 1.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 85398 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.176 REMARK 3 FREE R VALUE : 0.212 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2661 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.61 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6168 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.60 REMARK 3 BIN R VALUE (WORKING SET) : 0.2810 REMARK 3 BIN FREE R VALUE SET COUNT : 193 REMARK 3 BIN FREE R VALUE : 0.2890 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4622 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 489 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.18 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.26 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -2.47000 REMARK 3 B22 (A**2) : -0.68000 REMARK 3 B33 (A**2) : 3.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.080 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.083 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.950 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.968 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.957 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4857 ; 0.009 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 4734 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6586 ; 1.343 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 10901 ; 0.770 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 646 ; 5.470 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 216 ;34.091 ;23.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 849 ;13.140 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 39 ;15.529 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 719 ; 0.078 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5616 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1115 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2464 ; 3.658 ; 1.610 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 2463 ; 3.658 ; 1.610 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3087 ; 4.031 ; 2.694 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 3088 ; 4.031 ; 2.694 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 2393 ; 5.911 ; 2.155 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 2393 ; 5.911 ; 2.155 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 3479 ; 7.196 ; 3.359 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 5970 ; 9.584 ; 8.941 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 5679 ; 9.508 ; 8.099 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 15.3854 67.8014 34.5251 REMARK 3 T TENSOR REMARK 3 T11: 0.1320 T22: 0.0785 REMARK 3 T33: 0.0123 T12: -0.0015 REMARK 3 T13: 0.0077 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.9021 L22: 1.4776 REMARK 3 L33: 0.1426 L12: -0.5028 REMARK 3 L13: 0.0399 L23: 0.1374 REMARK 3 S TENSOR REMARK 3 S11: 0.0735 S12: 0.1337 S13: 0.0722 REMARK 3 S21: -0.1179 S22: -0.0779 S23: -0.1108 REMARK 3 S31: -0.0130 S32: -0.0114 S33: 0.0044 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 326 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8005 37.1476 5.1350 REMARK 3 T TENSOR REMARK 3 T11: 0.2572 T22: 0.3054 REMARK 3 T33: 0.0354 T12: 0.0303 REMARK 3 T13: -0.0024 T23: -0.0444 REMARK 3 L TENSOR REMARK 3 L11: 2.3856 L22: 1.2910 REMARK 3 L33: 1.3578 L12: 0.0547 REMARK 3 L13: -0.4597 L23: -0.6481 REMARK 3 S TENSOR REMARK 3 S11: -0.0198 S12: 0.4795 S13: -0.2754 REMARK 3 S21: -0.1577 S22: -0.0874 S23: -0.0461 REMARK 3 S31: 0.2477 S32: 0.1692 S33: 0.1072 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4N4U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082753. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X29A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 168537 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.570 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -5.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.000 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.06500 REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.60 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.2 REMARK 200 DATA REDUNDANCY IN SHELL : 3.90 REMARK 200 R MERGE FOR SHELL (I) : 0.84100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.23 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN IN 10 MM HEPES, PH 7.5, 150 MM REMARK 280 SODIUM CHLORIDE, 5% GLYCEROL, RESERVOIR: 0.1M BIS-TRIS:HCL, 28% REMARK 280 PEG2000 MME, VAPOR DIFFUSION, SITTING DROP, PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 29.78400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 76.50400 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 34.26600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 76.50400 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 29.78400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 34.26600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 HIS A 2 REMARK 465 HIS A 3 REMARK 465 HIS A 4 REMARK 465 HIS A 5 REMARK 465 HIS A 6 REMARK 465 HIS A 7 REMARK 465 SER A 8 REMARK 465 SER A 9 REMARK 465 GLY A 10 REMARK 465 VAL A 11 REMARK 465 ASP A 12 REMARK 465 LEU A 13 REMARK 465 GLY A 14 REMARK 465 THR A 15 REMARK 465 GLU A 16 REMARK 465 ASN A 17 REMARK 465 LEU A 18 REMARK 465 TYR A 19 REMARK 465 PHE A 20 REMARK 465 GLN A 21 REMARK 465 SER A 22 REMARK 465 MET B 1 REMARK 465 HIS B 2 REMARK 465 HIS B 3 REMARK 465 HIS B 4 REMARK 465 HIS B 5 REMARK 465 HIS B 6 REMARK 465 HIS B 7 REMARK 465 SER B 8 REMARK 465 SER B 9 REMARK 465 GLY B 10 REMARK 465 VAL B 11 REMARK 465 ASP B 12 REMARK 465 LEU B 13 REMARK 465 GLY B 14 REMARK 465 THR B 15 REMARK 465 GLU B 16 REMARK 465 ASN B 17 REMARK 465 LEU B 18 REMARK 465 TYR B 19 REMARK 465 PHE B 20 REMARK 465 GLN B 21 REMARK 465 SER B 22 REMARK 465 MET B 23 REMARK 465 ALA B 24 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 23 CG SD CE REMARK 470 ARG A 61 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 177 CA - C - O ANGL. DEV. = 18.2 DEGREES REMARK 500 ARG A 177 CA - C - O ANGL. DEV. = 18.4 DEGREES REMARK 500 ARG A 177 CA - C - N ANGL. DEV. = -15.9 DEGREES REMARK 500 ARG A 177 CA - C - N ANGL. DEV. = -16.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 106 -2.53 72.83 REMARK 500 ARG A 222 48.99 -87.58 REMARK 500 VAL B 146 -169.83 -122.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: EFI-510049 RELATED DB: TARGETTRACK DBREF 4N4U A 24 326 UNP Q7WPG5 Q7WPG5_BORBR 24 326 DBREF 4N4U B 24 326 UNP Q7WPG5 Q7WPG5_BORBR 24 326 SEQADV 4N4U MET A 1 UNP Q7WPG5 INITIATING METHIONINE SEQADV 4N4U HIS A 2 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS A 3 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS A 4 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS A 5 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS A 6 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS A 7 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER A 8 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER A 9 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLY A 10 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U VAL A 11 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U ASP A 12 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U LEU A 13 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLY A 14 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U THR A 15 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLU A 16 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U ASN A 17 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U LEU A 18 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U TYR A 19 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U PHE A 20 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLN A 21 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER A 22 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U MET A 23 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U MET B 1 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS B 2 UNP Q7WPG5 INITIATING METHIONINE SEQADV 4N4U HIS B 3 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS B 4 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS B 5 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS B 6 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U HIS B 7 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER B 8 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER B 9 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLY B 10 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U VAL B 11 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U ASP B 12 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U LEU B 13 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLY B 14 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U THR B 15 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLU B 16 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U ASN B 17 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U LEU B 18 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U TYR B 19 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U PHE B 20 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U GLN B 21 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U SER B 22 UNP Q7WPG5 EXPRESSION TAG SEQADV 4N4U MET B 23 UNP Q7WPG5 EXPRESSION TAG SEQRES 1 A 326 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 A 326 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA THR TRP SEQRES 3 A 326 MET ALA TYR THR PHE GLY PRO SER GLU ASN LEU ALA ASN SEQRES 4 A 326 VAL GLN GLY MET LYS ARG VAL MET GLU ASP ILE GLU LYS SEQRES 5 A 326 ASN THR GLY GLY GLU VAL LYS PHE ARG LEU ARG LEU ALA SEQRES 6 A 326 GLY SER LEU PRO ILE GLN ALA THR ASP ILE THR GLN ALA SEQRES 7 A 326 VAL GLY ASN GLY THR VAL ARG PHE ALA ASP ASP GLY PHE SEQRES 8 A 326 TYR LEU GLY ASN VAL ARG ILE ALA GLY ILE LEU ARG LEU SEQRES 9 A 326 PRO MET LEU LEU ARG SER GLN GLU ASP PHE ASP LYS ALA SEQRES 10 A 326 TYR ALA ILE MET LYS PRO TYR VAL GLU ARG ASP PHE GLY SEQRES 11 A 326 LYS GLN GLY VAL VAL VAL LEU GLY HIS PHE SER PHE PRO SEQRES 12 A 326 HIS GLN VAL ILE PHE SER ALA ARG LYS LEU GLU SER LEU SEQRES 13 A 326 ALA ASP ILE LYS GLY GLN LYS LEU ARG VAL SER SER PRO SEQRES 14 A 326 GLU GLN ALA ALA PHE VAL GLN ARG ALA GLY GLY ILE PRO SEQRES 15 A 326 VAL THR LEU GLY GLY ALA GLU VAL PRO SER ALA LEU SER SEQRES 16 A 326 ALA GLY THR ILE ASP GLY ALA LEU THR ALA SER ALA GLY SEQRES 17 A 326 GLY GLY LYS ILE TRP GLY ASP MET LEU LYS TYR ASN LEU SEQRES 18 A 326 ARG LEU PRO VAL ASN TYR PHE ASP GLY PHE TYR LEU VAL SEQRES 19 A 326 ASN LYS LYS ALA PHE GLU ALA LEU SER PRO GLU MET GLN SEQRES 20 A 326 ALA LYS MET ARG GLU SER VAL ALA ARG GLN ALA PRO GLY SEQRES 21 A 326 THR THR ALA GLN ILE ALA LYS GLU GLU GLY GLU VAL THR SEQRES 22 A 326 ASP ALA LEU ARG GLN LYS GLY MET VAL ILE VAL PRO SER SEQRES 23 A 326 THR PRO ALA MET GLU GLN ALA ALA THR ASP LEU VAL SER SEQRES 24 A 326 GLY TYR TRP GLU ASP TRP ALA ARG GLU GLN GLY PRO GLU SEQRES 25 A 326 ALA VAL GLN ALA LEU ALA GLU VAL ARG LYS ALA LEU GLY SEQRES 26 A 326 ARG SEQRES 1 B 326 MET HIS HIS HIS HIS HIS HIS SER SER GLY VAL ASP LEU SEQRES 2 B 326 GLY THR GLU ASN LEU TYR PHE GLN SER MET ALA THR TRP SEQRES 3 B 326 MET ALA TYR THR PHE GLY PRO SER GLU ASN LEU ALA ASN SEQRES 4 B 326 VAL GLN GLY MET LYS ARG VAL MET GLU ASP ILE GLU LYS SEQRES 5 B 326 ASN THR GLY GLY GLU VAL LYS PHE ARG LEU ARG LEU ALA SEQRES 6 B 326 GLY SER LEU PRO ILE GLN ALA THR ASP ILE THR GLN ALA SEQRES 7 B 326 VAL GLY ASN GLY THR VAL ARG PHE ALA ASP ASP GLY PHE SEQRES 8 B 326 TYR LEU GLY ASN VAL ARG ILE ALA GLY ILE LEU ARG LEU SEQRES 9 B 326 PRO MET LEU LEU ARG SER GLN GLU ASP PHE ASP LYS ALA SEQRES 10 B 326 TYR ALA ILE MET LYS PRO TYR VAL GLU ARG ASP PHE GLY SEQRES 11 B 326 LYS GLN GLY VAL VAL VAL LEU GLY HIS PHE SER PHE PRO SEQRES 12 B 326 HIS GLN VAL ILE PHE SER ALA ARG LYS LEU GLU SER LEU SEQRES 13 B 326 ALA ASP ILE LYS GLY GLN LYS LEU ARG VAL SER SER PRO SEQRES 14 B 326 GLU GLN ALA ALA PHE VAL GLN ARG ALA GLY GLY ILE PRO SEQRES 15 B 326 VAL THR LEU GLY GLY ALA GLU VAL PRO SER ALA LEU SER SEQRES 16 B 326 ALA GLY THR ILE ASP GLY ALA LEU THR ALA SER ALA GLY SEQRES 17 B 326 GLY GLY LYS ILE TRP GLY ASP MET LEU LYS TYR ASN LEU SEQRES 18 B 326 ARG LEU PRO VAL ASN TYR PHE ASP GLY PHE TYR LEU VAL SEQRES 19 B 326 ASN LYS LYS ALA PHE GLU ALA LEU SER PRO GLU MET GLN SEQRES 20 B 326 ALA LYS MET ARG GLU SER VAL ALA ARG GLN ALA PRO GLY SEQRES 21 B 326 THR THR ALA GLN ILE ALA LYS GLU GLU GLY GLU VAL THR SEQRES 22 B 326 ASP ALA LEU ARG GLN LYS GLY MET VAL ILE VAL PRO SER SEQRES 23 B 326 THR PRO ALA MET GLU GLN ALA ALA THR ASP LEU VAL SER SEQRES 24 B 326 GLY TYR TRP GLU ASP TRP ALA ARG GLU GLN GLY PRO GLU SEQRES 25 B 326 ALA VAL GLN ALA LEU ALA GLU VAL ARG LYS ALA LEU GLY SEQRES 26 B 326 ARG HET GOL A 401 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *489(H2 O) HELIX 1 1 LEU A 37 THR A 54 1 18 HELIX 2 2 GLN A 71 THR A 73 5 3 HELIX 3 3 ASP A 74 ASN A 81 1 8 HELIX 4 4 PHE A 91 ASN A 95 5 5 HELIX 5 5 VAL A 96 LEU A 104 5 9 HELIX 6 6 SER A 110 GLN A 132 1 23 HELIX 7 7 LEU A 156 LYS A 160 5 5 HELIX 8 8 SER A 168 ALA A 178 1 11 HELIX 9 9 GLY A 186 ALA A 188 5 3 HELIX 10 10 GLU A 189 GLY A 197 1 9 HELIX 11 11 GLY A 208 TRP A 213 1 6 HELIX 12 12 GLY A 214 LEU A 217 5 4 HELIX 13 13 LYS A 236 ALA A 241 1 6 HELIX 14 14 SER A 243 GLY A 280 1 38 HELIX 15 15 THR A 287 GLY A 310 1 24 HELIX 16 16 GLY A 310 GLY A 325 1 16 HELIX 17 17 LEU B 37 THR B 54 1 18 HELIX 18 18 ASP B 74 ASN B 81 1 8 HELIX 19 19 VAL B 96 LEU B 104 5 9 HELIX 20 20 SER B 110 LYS B 131 1 22 HELIX 21 21 SER B 155 LYS B 160 1 6 HELIX 22 22 SER B 168 ALA B 178 1 11 HELIX 23 23 GLY B 186 ALA B 188 5 3 HELIX 24 24 GLU B 189 ALA B 196 1 8 HELIX 25 25 GLY B 208 TRP B 213 1 6 HELIX 26 26 GLY B 214 LEU B 217 5 4 HELIX 27 27 LYS B 236 LEU B 242 1 7 HELIX 28 28 SER B 243 LYS B 279 1 37 HELIX 29 29 THR B 287 GLY B 310 1 24 HELIX 30 30 GLY B 310 GLY B 325 1 16 SHEET 1 A 8 VAL A 58 ARG A 63 0 SHEET 2 A 8 ALA A 24 TYR A 29 1 N TRP A 26 O LYS A 59 SHEET 3 A 8 PHE A 86 ASP A 89 1 O PHE A 86 N TYR A 29 SHEET 4 A 8 TYR A 219 ASN A 235 -1 O LEU A 233 N ALA A 87 SHEET 5 A 8 VAL A 134 SER A 149 -1 N GLN A 145 O ASN A 226 SHEET 6 A 8 GLY A 201 THR A 204 -1 O ALA A 202 N PHE A 148 SHEET 7 A 8 LYS A 163 VAL A 166 1 N ARG A 165 O GLY A 201 SHEET 8 A 8 ILE A 181 THR A 184 1 O VAL A 183 N LEU A 164 SHEET 1 B 5 VAL A 58 ARG A 63 0 SHEET 2 B 5 ALA A 24 TYR A 29 1 N TRP A 26 O LYS A 59 SHEET 3 B 5 PHE A 86 ASP A 89 1 O PHE A 86 N TYR A 29 SHEET 4 B 5 TYR A 219 ASN A 235 -1 O LEU A 233 N ALA A 87 SHEET 5 B 5 VAL A 282 PRO A 285 1 O VAL A 284 N ASN A 220 SHEET 1 C 8 PHE B 60 ARG B 63 0 SHEET 2 C 8 TRP B 26 TYR B 29 1 N ALA B 28 O ARG B 61 SHEET 3 C 8 PHE B 86 ASP B 89 1 O PHE B 86 N TYR B 29 SHEET 4 C 8 TYR B 219 ASN B 235 -1 O LEU B 233 N ALA B 87 SHEET 5 C 8 VAL B 134 SER B 149 -1 N SER B 149 O TYR B 219 SHEET 6 C 8 GLY B 201 THR B 204 -1 O THR B 204 N VAL B 146 SHEET 7 C 8 LYS B 163 ARG B 165 1 N ARG B 165 O LEU B 203 SHEET 8 C 8 ILE B 181 VAL B 183 1 O VAL B 183 N LEU B 164 SHEET 1 D 5 PHE B 60 ARG B 63 0 SHEET 2 D 5 TRP B 26 TYR B 29 1 N ALA B 28 O ARG B 61 SHEET 3 D 5 PHE B 86 ASP B 89 1 O PHE B 86 N TYR B 29 SHEET 4 D 5 TYR B 219 ASN B 235 -1 O LEU B 233 N ALA B 87 SHEET 5 D 5 VAL B 282 VAL B 284 1 O VAL B 284 N ASN B 220 SITE 1 AC1 10 GLY A 214 LEU A 217 LYS A 218 LYS A 279 SITE 2 AC1 10 GLY A 280 MET A 281 HOH A 782 ARG B 97 SITE 3 AC1 10 GLN B 309 HOH B 421 CRYST1 59.568 68.532 153.008 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016788 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014592 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006536 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 0.367686 -0.096368 0.924943 5.50780 1 MTRIX2 2 -0.306009 0.926687 0.218195 39.44881 1 MTRIX3 2 -0.878160 -0.363268 0.311241 67.34068 1