HEADER TRANSFERASE 11-OCT-13 4N67 TITLE CRYSTAL STRUCTURE OF THE N-TERMINAL FIC DOMAIN OF A PUTATIVE CELL TITLE 2 FILAMENTATION PROTEIN (VIRB-TRANSLOCATED BEP EFFECTOR PROTEIN) WITH TITLE 3 BOUND ADP FROM BARTONELLA QUINTANA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE CELL FILAMENTATION PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BARTONELLA QUINTANA; SOURCE 3 ORGANISM_TAXID: 283165; SOURCE 4 STRAIN: TOULOUSE; SOURCE 5 GENE: BQ10650; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS STRUCTURAL GENOMICS, NIAID, NATIONAL INSTITUTE OF ALLERGY AND KEYWDS 2 INFECTIOUS DISEASES, SEATTLE STRUCTURAL GENOMICS CENTER FOR KEYWDS 3 INFECTIOUS DISEASE, SSGCID, TRANSFERASE, CELL FILAMENTATION, KEYWDS 4 ADENYLYLATION, AMPYLATION EXPDTA X-RAY DIFFRACTION AUTHOR SEATTLE STRUCTURAL GENOMICS CENTER FOR INFECTIOUS DISEASE (SSGCID) REVDAT 4 20-SEP-23 4N67 1 REMARK REVDAT 3 08-SEP-21 4N67 1 JRNL REMARK SEQADV REVDAT 2 10-DEC-14 4N67 1 AUTHOR REVDAT 1 24-SEP-14 4N67 0 JRNL AUTH T.SCHIRMER,T.A.P.DE BEER,S.TAMEGGER,A.HARMS,N.DIETZ, JRNL AUTH 2 D.M.DRANOW,T.E.EDWARDS,P.J.MYLER,I.PHAN,C.DEHIO JRNL TITL EVOLUTIONARY DIVERSIFICATION OF HOST-TARGETED BARTONELLA JRNL TITL 2 EFFECTORS PROTEINS DERIVED FROM A CONSERVED FICTA JRNL TITL 3 TOXIN-ANTITOXIN MODULE. JRNL REF MICROORGANISMS V. 9 2021 JRNL REFN ESSN 2076-2607 JRNL PMID 34442725 JRNL DOI 10.3390/MICROORGANISMS9081645 REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 35577 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.173 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1874 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.55 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.59 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2566 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2330 REMARK 3 BIN FREE R VALUE SET COUNT : 111 REMARK 3 BIN FREE R VALUE : 0.2830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1695 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 257 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.18000 REMARK 3 B22 (A**2) : 0.05000 REMARK 3 B33 (A**2) : -0.23000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.075 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.074 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.047 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.443 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1849 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1703 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2506 ; 1.491 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3910 ; 0.782 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 226 ; 4.793 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;30.111 ;22.889 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 308 ;13.379 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 16 ;17.835 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 255 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2123 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 468 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 891 ; 0.931 ; 1.159 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 890 ; 0.931 ; 1.156 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1121 ; 1.581 ; 1.727 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 958 ; 1.431 ; 1.327 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 8 A 214 REMARK 3 ORIGIN FOR THE GROUP (A): 12.5785 81.3013 13.9846 REMARK 3 T TENSOR REMARK 3 T11: 0.0211 T22: 0.0410 REMARK 3 T33: 0.0602 T12: 0.0038 REMARK 3 T13: -0.0169 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 0.6032 L22: 1.5021 REMARK 3 L33: 0.8526 L12: -0.2857 REMARK 3 L13: -0.0058 L23: 0.1762 REMARK 3 S TENSOR REMARK 3 S11: -0.0442 S12: -0.0360 S13: 0.0196 REMARK 3 S21: 0.1722 S22: 0.0682 S23: -0.1122 REMARK 3 S31: 0.0348 S32: -0.0423 S33: -0.0240 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4N67 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082802. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-OCT-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-F REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9786 REMARK 200 MONOCHROMATOR : DIAMOND [111] REMARK 200 OPTICS : BERYLLIUM LENSES REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37518 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.04600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.7100 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.510 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.2 REMARK 200 STARTING MODEL: PDB ENTRY 2JK8 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: JCSG+(G7): 01.M SUCCINIC ACID, PH=7.0, REMARK 280 15% PEG-3350, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K, REMARK 280 PH 7 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.22500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.80000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.03500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.80000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.22500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.03500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -6 REMARK 465 ALA A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 HIS A 0 REMARK 465 GLU A 215 REMARK 465 PHE A 216 REMARK 465 ILE A 217 REMARK 465 SER A 218 REMARK 465 GLN A 219 REMARK 465 MET A 220 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 1 CG ND1 CD2 CE1 NE2 REMARK 470 HIS A 4 CG ND1 CD2 CE1 NE2 REMARK 470 LYS A 9 CG CD CE NZ REMARK 470 ASN A 10 CG OD1 ND2 REMARK 470 LYS A 97 CG CD CE NZ REMARK 470 LYS A 111 CG CD CE NZ REMARK 470 LYS A 112 CG CD CE NZ REMARK 470 GLN A 129 CG CD OE1 NE2 REMARK 470 THR A 155 N REMARK 470 LYS A 178 CG CD CE NZ REMARK 470 LYS A 209 CG CD CE NZ REMARK 470 LEU A 213 CG CD1 CD2 REMARK 470 LYS A 214 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 33 CD GLU A 33 OE2 0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 154 NE - CZ - NH1 ANGL. DEV. = 6.0 DEGREES REMARK 500 ARG A 154 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 88 80.48 -153.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 302 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4LU4 RELATED DB: PDB REMARK 900 THE SAME PROTEIN BUT WITHOUT ADP (APO) REMARK 900 RELATED ID: SSGCID-BAQUA.17330.C RELATED DB: TARGETTRACK DBREF 4N67 A 2 220 UNP Q6FYV8 Q6FYV8_BARQU 2 220 SEQADV 4N67 MET A -6 UNP Q6FYV8 INITIATING METHIONINE SEQADV 4N67 ALA A -5 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A -4 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A -3 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A -2 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A -1 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A 0 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 HIS A 1 UNP Q6FYV8 EXPRESSION TAG SEQADV 4N67 MET A 2 UNP Q6FYV8 LEU 2 ENGINEERED MUTATION SEQADV 4N67 LYS A 65 UNP Q6FYV8 ASN 65 ENGINEERED MUTATION SEQRES 1 A 227 MET ALA HIS HIS HIS HIS HIS HIS MET GLU HIS ASN TYR SEQRES 2 A 227 PHE TYR LYS ASN SER ALA THR LEU LYS ASN LYS HIS GLY SEQRES 3 A 227 ILE LYS ASN PRO ARG LYS LEU TYR GLU ARG CYS ALA HIS SEQRES 4 A 227 GLU THR ALA ARG GLU ALA VAL ASN PHE ARG LEU GLU PRO SEQRES 5 A 227 PRO PRO GLY LYS PHE ASP ALA ALA TYR LEU ARG THR ILE SEQRES 6 A 227 HIS TRP CYS LEU PHE HIS LYS THR PHE GLU TRP ALA GLY SEQRES 7 A 227 VAL THR ARG ASP GLN PRO PHE THR PHE GLU ASP GLY SER SEQRES 8 A 227 THR ALA CYS MET PRO ALA MET ARG PRO LYS GLY TYR LYS SEQRES 9 A 227 VAL PRO PHE ALA VAL GLY SER GLN ILE GLN ARG GLU LEU SEQRES 10 A 227 LYS LYS LEU GLU GLN ARG LEU THR ALA LYS ASN ASN LEU SEQRES 11 A 227 GLN GLY LEU SER ARG GLN GLU PHE ALA ALA ASN ALA ALA SEQRES 12 A 227 GLU VAL PHE THR ALA LEU ASP HIS ALA HIS PRO PHE ARG SEQRES 13 A 227 LYS GLY ASN GLY ARG THR GLN ARG MET PHE MET GLU LYS SEQRES 14 A 227 LEU GLY GLN ALA ALA GLY TYR LYS ILE ASP PHE SER LEU SEQRES 15 A 227 ILE THR LYS GLU ARG MET THR TYR ALA SER ILE GLU ALA SEQRES 16 A 227 MET GLN HIS ASN ASN PRO GLU PRO MET LYS ASP LEU PHE SEQRES 17 A 227 GLU ASP ILE THR HIS PRO GLN LYS SER LEU LEU LEU LYS SEQRES 18 A 227 GLU PHE ILE SER GLN MET HET ADP A 301 27 HET MG A 302 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MG MAGNESIUM ION FORMUL 2 ADP C10 H15 N5 O10 P2 FORMUL 3 MG MG 2+ FORMUL 4 HOH *257(H2 O) HELIX 1 1 HIS A 1 PHE A 7 5 7 HELIX 2 2 ASN A 22 ARG A 42 1 21 HELIX 3 3 ASP A 51 HIS A 64 1 14 HELIX 4 4 SER A 104 LYS A 120 1 17 HELIX 5 5 ASN A 121 GLN A 124 5 4 HELIX 6 6 SER A 127 HIS A 146 1 20 HELIX 7 7 ASN A 152 ARG A 154 1 3 HELIX 8 8 GLN A 156 ALA A 167 1 12 HELIX 9 9 PHE A 173 ILE A 176 5 4 HELIX 10 10 THR A 177 ASN A 192 1 16 HELIX 11 11 PRO A 194 ILE A 204 1 11 HELIX 12 12 GLN A 208 LYS A 214 1 7 SHEET 1 A 2 PHE A 78 THR A 79 0 SHEET 2 A 2 THR A 85 ALA A 86 -1 O ALA A 86 N PHE A 78 SHEET 1 B 2 TYR A 169 ILE A 171 0 SHEET 2 B 2 THR A 205 PRO A 207 -1 O HIS A 206 N LYS A 170 LINK O2A ADP A 301 MG MG A 302 1555 1555 2.72 SITE 1 AC1 20 PRO A 93 TYR A 96 PHE A 139 ASP A 143 SITE 2 AC1 20 HIS A 146 LYS A 150 GLY A 151 ASN A 152 SITE 3 AC1 20 GLY A 153 SER A 185 ILE A 186 MET A 189 SITE 4 AC1 20 GLN A 190 MG A 302 HOH A 475 HOH A 523 SITE 5 AC1 20 HOH A 538 HOH A 572 HOH A 646 HOH A 647 SITE 1 AC2 4 GLY A 151 GLY A 153 ARG A 154 ADP A 301 CRYST1 40.450 64.070 97.600 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024722 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010246 0.00000