HEADER PROTEIN BINDING 15-OCT-13 4N7C TITLE STRUCTURAL RE-EXAMINATION OF NATIVE BLA G 4 COMPND MOL_ID: 1; COMPND 2 MOLECULE: BLA G 4 ALLERGEN VARIANT 1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BLATTELLA GERMANICA; SOURCE 3 ORGANISM_COMMON: GERMAN COCKROACH; SOURCE 4 ORGANISM_TAXID: 6973; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: ORIGAMI B; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET32A MODIFIED KEYWDS ALLERGEN, BETA BARREL, GLYCOPROTEIN, SECRETED, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR L.R.OFFERMANN,S.L.CHAN,T.OSINSKI,Y.W.TAN,F.T.CHEW,J.SIVARAMAN, AUTHOR 2 Y.K.MOK,W.MINOR,M.CHRUSZCZ REVDAT 4 29-NOV-23 4N7C 1 REMARK REVDAT 3 20-SEP-23 4N7C 1 REMARK REVDAT 2 13-APR-22 4N7C 1 AUTHOR JRNL REMARK SSBOND REVDAT 1 21-MAY-14 4N7C 0 JRNL AUTH L.R.OFFERMANN,S.L.CHAN,T.OSINSKI,Y.W.TAN,F.T.CHEW, JRNL AUTH 2 J.SIVARAMAN,Y.K.MOK,W.MINOR,M.CHRUSZCZ JRNL TITL THE MAJOR COCKROACH ALLERGEN BLA G 4 BINDS TYRAMINE AND JRNL TITL 2 OCTOPAMINE. JRNL REF MOL.IMMUNOL. V. 60 86 2014 JRNL REFN ISSN 0161-5890 JRNL PMID 24769496 JRNL DOI 10.1016/J.MOLIMM.2014.03.016 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.39 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 22948 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.187 REMARK 3 R VALUE (WORKING SET) : 0.186 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1229 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.80 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1654 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 99 REMARK 3 BIN FREE R VALUE : 0.3770 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1370 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 127 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.15000 REMARK 3 B22 (A**2) : 0.15000 REMARK 3 B33 (A**2) : -0.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.099 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.780 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.959 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1475 ; 0.024 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1296 ; 0.000 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2003 ; 2.233 ; 1.954 REMARK 3 BOND ANGLES OTHERS (DEGREES): 2955 ; 3.853 ; 3.006 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 178 ; 6.758 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 75 ;33.188 ;23.600 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 219 ;13.636 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.627 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 212 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1707 ; 0.014 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 369 ; 0.031 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 4 A 23 REMARK 3 ORIGIN FOR THE GROUP (A): 33.2910 6.7744 17.2910 REMARK 3 T TENSOR REMARK 3 T11: 0.0737 T22: 0.1438 REMARK 3 T33: 0.1921 T12: -0.0191 REMARK 3 T13: -0.0731 T23: 0.0412 REMARK 3 L TENSOR REMARK 3 L11: 2.7245 L22: 5.6751 REMARK 3 L33: 6.0305 L12: -0.6257 REMARK 3 L13: 0.1614 L23: -2.4616 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: -0.3543 S13: -0.0115 REMARK 3 S21: 0.2780 S22: -0.1509 S23: -0.6610 REMARK 3 S31: -0.1420 S32: 0.7040 S33: 0.2129 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 57 REMARK 3 ORIGIN FOR THE GROUP (A): 17.8244 6.7033 11.7261 REMARK 3 T TENSOR REMARK 3 T11: 0.1956 T22: 0.0193 REMARK 3 T33: 0.0664 T12: -0.0090 REMARK 3 T13: -0.0432 T23: 0.0069 REMARK 3 L TENSOR REMARK 3 L11: 1.2307 L22: 3.3033 REMARK 3 L33: 0.9054 L12: 0.4073 REMARK 3 L13: -0.4066 L23: -0.6152 REMARK 3 S TENSOR REMARK 3 S11: -0.0442 S12: -0.0291 S13: 0.0217 REMARK 3 S21: -0.1564 S22: 0.0070 S23: 0.0518 REMARK 3 S31: -0.0060 S32: 0.0314 S33: 0.0372 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 58 A 80 REMARK 3 ORIGIN FOR THE GROUP (A): 15.5458 9.3301 16.0426 REMARK 3 T TENSOR REMARK 3 T11: 0.2269 T22: 0.0925 REMARK 3 T33: 0.1327 T12: 0.0054 REMARK 3 T13: -0.0366 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.5515 L22: 3.7842 REMARK 3 L33: 1.7413 L12: -1.0730 REMARK 3 L13: 0.3956 L23: 0.7021 REMARK 3 S TENSOR REMARK 3 S11: -0.0291 S12: -0.3735 S13: 0.0257 REMARK 3 S21: 0.0815 S22: -0.0890 S23: 0.2682 REMARK 3 S31: -0.1235 S32: -0.0364 S33: 0.1181 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 81 A 90 REMARK 3 ORIGIN FOR THE GROUP (A): 17.2265 11.4885 21.8968 REMARK 3 T TENSOR REMARK 3 T11: 0.1982 T22: 0.1307 REMARK 3 T33: 0.3199 T12: -0.0152 REMARK 3 T13: 0.0165 T23: -0.1713 REMARK 3 L TENSOR REMARK 3 L11: 0.2734 L22: 9.2236 REMARK 3 L33: 4.8216 L12: 0.6179 REMARK 3 L13: 0.9978 L23: 0.5616 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: -0.0975 S13: 0.1136 REMARK 3 S21: 0.5080 S22: 0.0409 S23: 0.2770 REMARK 3 S31: -0.1988 S32: -0.1636 S33: -0.0457 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 91 A 121 REMARK 3 ORIGIN FOR THE GROUP (A): 25.0068 2.6922 15.1875 REMARK 3 T TENSOR REMARK 3 T11: 0.1444 T22: 0.0522 REMARK 3 T33: 0.0675 T12: -0.0003 REMARK 3 T13: -0.0222 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 1.2627 L22: 2.4536 REMARK 3 L33: 1.4948 L12: 0.1013 REMARK 3 L13: 0.0860 L23: -0.6394 REMARK 3 S TENSOR REMARK 3 S11: -0.1118 S12: -0.0957 S13: -0.0085 REMARK 3 S21: -0.0499 S22: -0.0156 S23: -0.2619 REMARK 3 S31: 0.0744 S32: 0.2105 S33: 0.1275 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 122 A 135 REMARK 3 ORIGIN FOR THE GROUP (A): 17.0651 6.1310 0.6530 REMARK 3 T TENSOR REMARK 3 T11: 0.2026 T22: 0.0845 REMARK 3 T33: 0.0678 T12: -0.0319 REMARK 3 T13: 0.0141 T23: -0.0009 REMARK 3 L TENSOR REMARK 3 L11: 4.2969 L22: 1.4530 REMARK 3 L33: 4.7155 L12: -0.6819 REMARK 3 L13: 2.7076 L23: -1.6660 REMARK 3 S TENSOR REMARK 3 S11: -0.1667 S12: 0.3043 S13: 0.1907 REMARK 3 S21: -0.1235 S22: -0.0142 S23: -0.1500 REMARK 3 S31: 0.1065 S32: -0.0963 S33: 0.1809 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 136 A 151 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6451 -1.1824 -0.3144 REMARK 3 T TENSOR REMARK 3 T11: 0.2653 T22: 0.2970 REMARK 3 T33: 0.0817 T12: -0.1965 REMARK 3 T13: -0.0541 T23: 0.0571 REMARK 3 L TENSOR REMARK 3 L11: 9.4465 L22: 7.2598 REMARK 3 L33: 8.3267 L12: -1.1366 REMARK 3 L13: -0.8247 L23: -2.3121 REMARK 3 S TENSOR REMARK 3 S11: -0.2598 S12: 0.4940 S13: -0.4422 REMARK 3 S21: -0.5693 S22: 0.6432 S23: 0.6401 REMARK 3 S31: 0.7441 S32: -1.2801 S33: -0.3834 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 152 A 174 REMARK 3 ORIGIN FOR THE GROUP (A): 26.6389 -6.9745 6.7852 REMARK 3 T TENSOR REMARK 3 T11: 0.2831 T22: 0.0765 REMARK 3 T33: 0.1968 T12: 0.0294 REMARK 3 T13: 0.0737 T23: -0.0043 REMARK 3 L TENSOR REMARK 3 L11: 2.3665 L22: 3.9601 REMARK 3 L33: 0.8997 L12: 1.1298 REMARK 3 L13: -0.0552 L23: -1.3383 REMARK 3 S TENSOR REMARK 3 S11: -0.2520 S12: 0.0776 S13: -0.4071 REMARK 3 S21: -0.3868 S22: 0.0171 S23: -0.5232 REMARK 3 S31: 0.3544 S32: 0.1048 S33: 0.2349 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4N7C COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 17-OCT-13. REMARK 100 THE DEPOSITION ID IS D_1000082843. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JAN-06 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X12C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9797, 0.9799, 0.9600 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45386 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 15.00 REMARK 200 R MERGE (I) : 0.06400 REMARK 200 R SYM (I) : 0.06400 REMARK 200 FOR THE DATA SET : 43.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.90 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : 0.50000 REMARK 200 FOR SHELL : 4.750 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-3000, MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 3EBK REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.11 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M HEPES, 1.5 M SODIUM CITRATE, 3% REMARK 280 ACETONE, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 62.70450 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 30.17700 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 30.17700 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.35225 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 30.17700 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 30.17700 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 94.05675 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 30.17700 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 30.17700 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.35225 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 30.17700 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 30.17700 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 94.05675 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 62.70450 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 SD MET A 141 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 1 REMARK 465 THR A 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 63 CD OE1 NE2 REMARK 470 LYS A 65 CG CD CE NZ REMARK 470 ASN A 66 CG OD1 ND2 REMARK 470 ARG A 67 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 75 CD CE NZ REMARK 470 ASP A 87 CG OD1 OD2 REMARK 470 LYS A 90 CD CE NZ REMARK 470 LYS A 135 CG CD CE NZ REMARK 470 LEU A 136 CG CD1 CD2 REMARK 470 ASP A 138 CG OD1 OD2 REMARK 470 LYS A 139 CG CD CE NZ REMARK 470 GLU A 140 CG CD OE1 OE2 REMARK 470 LYS A 155 CD CE NZ REMARK 470 LYS A 162 CD CE NZ REMARK 470 LYS A 167 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 20 127.10 -35.75 REMARK 500 TYR A 51 -138.09 54.96 REMARK 500 ASP A 53 22.53 -160.87 REMARK 500 TYR A 103 -45.02 69.94 REMARK 500 ASN A 105 -51.06 -127.31 REMARK 500 LEU A 136 118.13 -35.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 MET A 141 -10.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE AEF A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 204 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3EBK RELATED DB: PDB REMARK 900 RELATED ID: 4N7D RELATED DB: PDB DBREF 4N7C A 1 176 UNP B7TYB2 B7TYB2_BLAGE 1 176 SEQRES 1 A 176 ALA THR ASP THR LEU ALA ASN GLU ASP CYS PHE ARG HIS SEQRES 2 A 176 GLU SER LEU VAL PRO ASN LEU ASP TYR GLU ARG PHE ARG SEQRES 3 A 176 GLY SER TRP ILE ILE ALA ALA GLY THR SER GLU ALA LEU SEQRES 4 A 176 THR GLN TYR LYS CYS TRP ILE ASP ARG PHE SER TYR ASP SEQRES 5 A 176 ASP ALA LEU VAL SER LYS TYR THR ASP SER GLN GLY LYS SEQRES 6 A 176 ASN ARG THR THR ILE ARG GLY ARG THR LYS PHE GLU GLY SEQRES 7 A 176 ASN LYS PHE THR ILE ASP TYR ASN ASP LYS GLY LYS ALA SEQRES 8 A 176 PHE SER ALA PRO TYR SER VAL LEU ALA THR ASP TYR GLU SEQRES 9 A 176 ASN TYR ALA ILE VAL GLU GLY CYS PRO ALA ALA ALA ASN SEQRES 10 A 176 GLY HIS VAL ILE TYR VAL GLN LEU ARG MET THR LEU ARG SEQRES 11 A 176 ARG PHE HIS PRO LYS LEU GLY ASP LYS GLU MET LEU GLN SEQRES 12 A 176 HIS TYR THR LEU ASP GLN VAL ASN GLN ASN LYS LYS ALA SEQRES 13 A 176 ILE GLU GLU ASP LEU LYS HIS PHE ASN LEU LYS TYR GLU SEQRES 14 A 176 ASP LEU HIS SER THR CYS HIS HET CIT A 201 26 HET AEF A 202 10 HET GOL A 203 6 HET GOL A 204 6 HETNAM CIT CITRIC ACID HETNAM AEF 4-(2-AMINOETHYL)PHENOL HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CIT C6 H8 O7 FORMUL 3 AEF C8 H11 N O FORMUL 4 GOL 2(C3 H8 O3) FORMUL 6 HOH *127(H2 O) HELIX 1 1 ASP A 21 ARG A 26 1 6 HELIX 2 2 GLU A 37 TYR A 42 5 6 HELIX 3 3 ASP A 87 SER A 93 5 7 HELIX 4 4 PRO A 113 ASN A 117 5 5 HELIX 5 5 GLU A 140 ASN A 153 1 14 HELIX 6 6 ASN A 153 PHE A 164 1 12 HELIX 7 7 LYS A 167 LEU A 171 5 5 SHEET 1 A10 HIS A 172 SER A 173 0 SHEET 2 A10 GLY A 27 GLY A 34 -1 N GLY A 34 O HIS A 172 SHEET 3 A10 VAL A 120 MET A 127 -1 O LEU A 125 N ILE A 30 SHEET 4 A10 TYR A 106 GLY A 111 -1 N ALA A 107 O GLN A 124 SHEET 5 A10 ALA A 94 THR A 101 -1 N SER A 97 O GLU A 110 SHEET 6 A10 LYS A 80 TYR A 85 -1 N PHE A 81 O TYR A 96 SHEET 7 A10 THR A 68 GLU A 77 -1 N GLU A 77 O LYS A 80 SHEET 8 A10 ALA A 54 THR A 60 -1 N SER A 57 O ILE A 70 SHEET 9 A10 LYS A 43 SER A 50 -1 N ILE A 46 O LYS A 58 SHEET 10 A10 GLY A 27 GLY A 34 -1 N ILE A 31 O TRP A 45 SSBOND 1 CYS A 10 CYS A 112 1555 1555 2.12 SSBOND 2 CYS A 44 CYS A 175 1555 1555 2.13 SITE 1 AC1 15 ARG A 12 THR A 35 SER A 36 GLU A 37 SITE 2 AC1 15 ALA A 116 ASN A 117 HIS A 119 ARG A 130 SITE 3 AC1 15 ARG A 131 HOH A 316 HOH A 335 HOH A 362 SITE 4 AC1 15 HOH A 383 HOH A 395 HOH A 404 SITE 1 AC2 10 LEU A 39 TRP A 45 ASP A 47 ILE A 83 SITE 2 AC2 10 TYR A 85 TYR A 96 TYR A 122 HOH A 306 SITE 3 AC2 10 HOH A 308 HOH A 309 SITE 1 AC3 2 THR A 128 LEU A 129 SITE 1 AC4 5 LEU A 16 VAL A 17 ALA A 100 THR A 101 SITE 2 AC4 5 ASP A 160 CRYST1 60.354 60.354 125.409 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016569 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016569 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007974 0.00000