data_4NBI # _entry.id 4NBI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.381 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4NBI pdb_00004nbi 10.2210/pdb4nbi/pdb RCSB RCSB082993 ? ? WWPDB D_1000082993 ? ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4NBJ _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.entry_id 4NBI _pdbx_database_status.methods_development_category ? _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.recvd_initial_deposition_date 2013-10-23 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Ahmad, S.' 1 'Routh, S.B.' 2 'Kamarthapu, V.' 3 'Sankaranarayanan, R.' 4 # _citation.id primary _citation.title 'Mechanism of chiral proofreading during translation of the genetic code.' _citation.journal_abbrev Elife _citation.journal_volume 2 _citation.page_first e01519 _citation.page_last e01519 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 2050-084X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24302572 _citation.pdbx_database_id_DOI 10.7554/eLife.01519 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Ahmad, S.' 1 ? primary 'Routh, S.B.' 2 ? primary 'Kamarthapu, V.' 3 ? primary 'Chalissery, J.' 4 ? primary 'Muthukumar, S.' 5 ? primary 'Hussain, T.' 6 ? primary 'Kruparani, S.P.' 7 ? primary 'Deshmukh, M.V.' 8 ? primary 'Sankaranarayanan, R.' 9 ? # _cell.length_a 82.134 _cell.length_b 65.743 _cell.length_c 56.917 _cell.angle_alpha 90.000 _cell.angle_beta 93.300 _cell.angle_gamma 90.000 _cell.entry_id 4NBI _cell.pdbx_unique_axis ? _cell.Z_PDB 8 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.entry_id 4NBI _symmetry.Int_Tables_number 5 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'D-tyrosyl-tRNA(Tyr) deacylase' 19233.084 2 3.1.-.- ? ? ? 2 non-polymer syn "3'-deoxy-3'-(D-tyrosylamino)adenosine" 429.430 2 ? ? ? ? 3 non-polymer syn 'TRIETHYLENE GLYCOL' 150.173 1 ? ? ? ? 4 water nat water 18.015 250 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLN YELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI NLNK ; _entity_poly.pdbx_seq_one_letter_code_can ;MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLN YELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI NLNK ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ARG n 1 3 VAL n 1 4 VAL n 1 5 ILE n 1 6 GLN n 1 7 ARG n 1 8 VAL n 1 9 LYS n 1 10 GLY n 1 11 ALA n 1 12 ILE n 1 13 LEU n 1 14 SER n 1 15 VAL n 1 16 ARG n 1 17 LYS n 1 18 GLU n 1 19 ASN n 1 20 ILE n 1 21 GLY n 1 22 GLU n 1 23 ASN n 1 24 GLU n 1 25 LYS n 1 26 GLU n 1 27 LEU n 1 28 GLU n 1 29 ILE n 1 30 ILE n 1 31 SER n 1 32 GLU n 1 33 ILE n 1 34 LYS n 1 35 ASN n 1 36 GLY n 1 37 LEU n 1 38 ILE n 1 39 CYS n 1 40 PHE n 1 41 LEU n 1 42 GLY n 1 43 ILE n 1 44 HIS n 1 45 LYS n 1 46 ASN n 1 47 ASP n 1 48 THR n 1 49 TRP n 1 50 GLU n 1 51 ASP n 1 52 ALA n 1 53 LEU n 1 54 TYR n 1 55 ILE n 1 56 ILE n 1 57 ARG n 1 58 LYS n 1 59 CYS n 1 60 LEU n 1 61 ASN n 1 62 LEU n 1 63 ARG n 1 64 LEU n 1 65 TRP n 1 66 ASN n 1 67 ASN n 1 68 ASP n 1 69 ASN n 1 70 LYS n 1 71 THR n 1 72 TRP n 1 73 ASP n 1 74 LYS n 1 75 ASN n 1 76 VAL n 1 77 LYS n 1 78 ASP n 1 79 LEU n 1 80 ASN n 1 81 TYR n 1 82 GLU n 1 83 LEU n 1 84 LEU n 1 85 ILE n 1 86 VAL n 1 87 SER n 1 88 GLN n 1 89 PHE n 1 90 THR n 1 91 LEU n 1 92 PHE n 1 93 GLY n 1 94 ASN n 1 95 THR n 1 96 LYS n 1 97 LYS n 1 98 GLY n 1 99 ASN n 1 100 LYS n 1 101 PRO n 1 102 ASP n 1 103 PHE n 1 104 HIS n 1 105 LEU n 1 106 ALA n 1 107 LYS n 1 108 GLU n 1 109 PRO n 1 110 ASN n 1 111 GLU n 1 112 ALA n 1 113 LEU n 1 114 ILE n 1 115 PHE n 1 116 TYR n 1 117 ASN n 1 118 LYS n 1 119 ILE n 1 120 ILE n 1 121 ASP n 1 122 GLU n 1 123 PHE n 1 124 LYS n 1 125 LYS n 1 126 GLN n 1 127 TYR n 1 128 ASN n 1 129 ASP n 1 130 ASP n 1 131 LYS n 1 132 ILE n 1 133 LYS n 1 134 ILE n 1 135 GLY n 1 136 LYS n 1 137 PHE n 1 138 GLY n 1 139 ASN n 1 140 TYR n 1 141 MET n 1 142 ASN n 1 143 ILE n 1 144 ASP n 1 145 VAL n 1 146 THR n 1 147 ASN n 1 148 ASP n 1 149 GLY n 1 150 PRO n 1 151 VAL n 1 152 THR n 1 153 ILE n 1 154 TYR n 1 155 ILE n 1 156 ASP n 1 157 THR n 1 158 HIS n 1 159 ASP n 1 160 ILE n 1 161 ASN n 1 162 LEU n 1 163 ASN n 1 164 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DTD, PF11_0095' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 3D7 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Plasmodium falciparum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 36329 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-21b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8IIS0_PLAF7 _struct_ref.pdbx_db_accession Q8IIS0 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MRVVIQRVKGAILSVRKENIGENEKELEIISEIKNGLICFLGIHKNDTWEDALYIIRKCLNLRLWNNDNKTWDKNVKDLN YELLIVSQFTLFGNTKKGNKPDFHLAKEPNEALIFYNKIIDEFKKQYNDDKIKIGKFGNYMNIDVTNDGPVTIYIDTHDI NLNK ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NBI A 1 ? 164 ? Q8IIS0 1 ? 164 ? 1 164 2 1 4NBI B 1 ? 164 ? Q8IIS0 1 ? 164 ? 1 164 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 D3Y non-polymer . "3'-deoxy-3'-(D-tyrosylamino)adenosine" ? 'C19 H23 N7 O5' 429.430 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PGE non-polymer . 'TRIETHYLENE GLYCOL' ? 'C6 H14 O4' 150.173 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4NBI _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.pdbx_mosaicity 1.277 _exptl_crystal.pdbx_mosaicity_esd ? _exptl_crystal.density_Matthews 1.99 _exptl_crystal.density_diffrn ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_percent_sol 38.32 _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '32% PEG 3350, 0.6M sodium chloride, 0.1M HEPES, pH 7.0, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR scanner 345 mm plate' _diffrn_detector.pdbx_collection_date 2011-08-21 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4NBI _reflns.d_resolution_high 1.860 _reflns.d_resolution_low 25.000 _reflns.number_obs 25156 _reflns.pdbx_Rmerge_I_obs 0.075 _reflns.pdbx_netI_over_sigmaI 24.800 _reflns.pdbx_chi_squared 1.343 _reflns.pdbx_redundancy 7.100 _reflns.percent_possible_obs 98.300 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.pdbx_rejects _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.pdbx_netI_over_sigmaI_obs _reflns_shell.number_possible _reflns_shell.number_unique_all _reflns_shell.Rmerge_F_all _reflns_shell.Rmerge_F_obs _reflns_shell.Rmerge_I_all _reflns_shell.meanI_over_sigI_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_Rrim_I_all _reflns_shell.pdbx_Rpim_I_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.860 1.930 ? ? ? ? 0.283 ? ? 0.859 6.400 ? ? ? 2283 ? ? ? ? 89.300 ? ? 1 1 1.930 2.000 ? ? ? ? 0.237 ? ? 0.975 7.100 ? ? ? 2480 ? ? ? ? 98.100 ? ? 2 1 2.000 2.090 ? ? ? ? 0.191 ? ? 1.083 7.100 ? ? ? 2525 ? ? ? ? 98.400 ? ? 3 1 2.090 2.210 ? ? ? ? 0.153 ? ? 1.068 7.100 ? ? ? 2523 ? ? ? ? 98.800 ? ? 4 1 2.210 2.340 ? ? ? ? 0.124 ? ? 1.233 7.200 ? ? ? 2504 ? ? ? ? 99.100 ? ? 5 1 2.340 2.520 ? ? ? ? 0.102 ? ? 1.294 7.200 ? ? ? 2532 ? ? ? ? 99.500 ? ? 6 1 2.520 2.780 ? ? ? ? 0.078 ? ? 1.334 7.200 ? ? ? 2569 ? ? ? ? 99.700 ? ? 7 1 2.780 3.180 ? ? ? ? 0.058 ? ? 1.484 7.300 ? ? ? 2552 ? ? ? ? 100.000 ? ? 8 1 3.180 4.000 ? ? ? ? 0.051 ? ? 1.929 7.200 ? ? ? 2574 ? ? ? ? 100.000 ? ? 9 1 4.000 25.000 ? ? ? ? 0.076 ? ? 2.003 7.200 ? ? ? 2614 ? ? ? ? 99.900 ? ? 10 1 # _refine.entry_id 4NBI _refine.ls_d_res_high 1.8600 _refine.ls_d_res_low 25.0000 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.6400 _refine.ls_number_reflns_obs 25154 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT U VALUES' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1690 _refine.ls_R_factor_R_work 0.1677 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.1925 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1276 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 30.6650 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 1.7100 _refine.aniso_B[2][2] 0.0000 _refine.aniso_B[3][3] -1.7700 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.5800 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9670 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1550 _refine.pdbx_overall_ESU_R_Free 0.1270 _refine.overall_SU_ML 0.0820 _refine.overall_SU_B 2.6510 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 3KNF _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 81.350 _refine.B_iso_min 12.330 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2593 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 72 _refine_hist.number_atoms_solvent 250 _refine_hist.number_atoms_total 2915 _refine_hist.d_res_high 1.8600 _refine_hist.d_res_low 25.0000 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2693 0.007 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3633 1.093 1.982 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 311 5.891 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 129 45.213 25.504 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 501 12.881 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 10 12.760 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 402 0.079 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1992 0.004 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.8610 _refine_ls_shell.d_res_low 1.9090 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 91.5500 _refine_ls_shell.number_reflns_R_work 1619 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2360 _refine_ls_shell.R_factor_R_free 0.2600 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 71 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1690 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.redundancy_reflns_obs ? # _struct.entry_id 4NBI _struct.title ;D-aminoacyl-tRNA deacylase (DTD) from Plasmodium falciparum in complex with D-tyrosyl-3'-aminoadenosine at 1.86 Angstrom resolution ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NBI _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'DTD, DEACYLASE, DTD-like, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 48 ? LEU A 62 ? THR A 48 LEU A 62 1 ? 15 HELX_P HELX_P2 2 PHE A 89 ? GLY A 93 ? PHE A 89 GLY A 93 5 ? 5 HELX_P HELX_P3 3 GLU A 108 ? TYR A 127 ? GLU A 108 TYR A 127 1 ? 20 HELX_P HELX_P4 4 ASN A 128 ? ASP A 130 ? ASN A 128 ASP A 130 5 ? 3 HELX_P HELX_P5 5 HIS A 158 ? ILE A 160 ? HIS A 158 ILE A 160 5 ? 3 HELX_P HELX_P6 6 THR B 48 ? LEU B 62 ? THR B 48 LEU B 62 1 ? 15 HELX_P HELX_P7 7 PHE B 89 ? GLY B 93 ? PHE B 89 GLY B 93 5 ? 5 HELX_P HELX_P8 8 GLU B 108 ? TYR B 127 ? GLU B 108 TYR B 127 1 ? 20 HELX_P HELX_P9 9 ASN B 128 ? ASP B 130 ? ASN B 128 ASP B 130 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 GLY 149 A . ? GLY 149 A PRO 150 A ? PRO 150 A 1 -9.78 2 GLY 149 B . ? GLY 149 B PRO 150 B ? PRO 150 B 1 -11.02 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 10 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel B 6 7 ? anti-parallel B 7 8 ? anti-parallel B 8 9 ? parallel B 9 10 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 27 ? ILE A 33 ? LEU A 27 ILE A 33 A 2 ARG A 2 ? ARG A 16 ? ARG A 2 ARG A 16 A 3 MET A 141 ? ASP A 156 ? MET A 141 ASP A 156 A 4 MET B 141 ? ASP B 156 ? MET B 141 ASP B 156 A 5 ARG B 2 ? VAL B 15 ? ARG B 2 VAL B 15 A 6 GLU B 28 ? ILE B 33 ? GLU B 28 ILE B 33 B 1 ILE A 132 ? ILE A 134 ? ILE A 132 ILE A 134 B 2 GLU A 82 ? SER A 87 ? GLU A 82 SER A 87 B 3 GLY A 36 ? GLY A 42 ? GLY A 36 GLY A 42 B 4 ARG A 2 ? ARG A 16 ? ARG A 2 ARG A 16 B 5 MET A 141 ? ASP A 156 ? MET A 141 ASP A 156 B 6 MET B 141 ? ASP B 156 ? MET B 141 ASP B 156 B 7 ARG B 2 ? VAL B 15 ? ARG B 2 VAL B 15 B 8 GLY B 36 ? GLY B 42 ? GLY B 36 GLY B 42 B 9 GLU B 82 ? SER B 87 ? GLU B 82 SER B 87 B 10 ILE B 132 ? ILE B 134 ? ILE B 132 ILE B 134 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O SER A 31 ? O SER A 31 N LEU A 13 ? N LEU A 13 A 2 3 N SER A 14 ? N SER A 14 O ASN A 142 ? O ASN A 142 A 3 4 N ASN A 147 ? N ASN A 147 O ILE B 143 ? O ILE B 143 A 4 5 O ILE B 153 ? O ILE B 153 N ILE B 5 ? N ILE B 5 A 5 6 N LEU B 13 ? N LEU B 13 O SER B 31 ? O SER B 31 B 1 2 O LYS A 133 ? O LYS A 133 N LEU A 83 ? N LEU A 83 B 2 3 O LEU A 84 ? O LEU A 84 N CYS A 39 ? N CYS A 39 B 3 4 O GLY A 42 ? O GLY A 42 N ARG A 2 ? N ARG A 2 B 4 5 N SER A 14 ? N SER A 14 O ASN A 142 ? O ASN A 142 B 5 6 N ASN A 147 ? N ASN A 147 O ILE B 143 ? O ILE B 143 B 6 7 O ILE B 153 ? O ILE B 153 N ILE B 5 ? N ILE B 5 B 7 8 N ARG B 2 ? N ARG B 2 O GLY B 42 ? O GLY B 42 B 8 9 N CYS B 39 ? N CYS B 39 O VAL B 86 ? O VAL B 86 B 9 10 N LEU B 83 ? N LEU B 83 O LYS B 133 ? O LYS B 133 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A D3Y 201 ? 14 'BINDING SITE FOR RESIDUE D3Y A 201' AC2 Software A PGE 502 ? 5 'BINDING SITE FOR RESIDUE PGE A 502' AC3 Software B D3Y 201 ? 15 'BINDING SITE FOR RESIDUE D3Y B 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 14 LEU A 41 ? LEU A 41 . ? 1_555 ? 2 AC1 14 ILE A 43 ? ILE A 43 . ? 1_555 ? 3 AC1 14 SER A 87 ? SER A 87 . ? 1_555 ? 4 AC1 14 GLN A 88 ? GLN A 88 . ? 1_555 ? 5 AC1 14 PHE A 89 ? PHE A 89 . ? 1_555 ? 6 AC1 14 LYS A 107 ? LYS A 107 . ? 1_555 ? 7 AC1 14 ALA A 112 ? ALA A 112 . ? 1_555 ? 8 AC1 14 PHE A 137 ? PHE A 137 . ? 1_555 ? 9 AC1 14 GLY A 138 ? GLY A 138 . ? 1_555 ? 10 AC1 14 ASN A 139 ? ASN A 139 . ? 1_555 ? 11 AC1 14 HOH F . ? HOH A 648 . ? 1_555 ? 12 AC1 14 HOH F . ? HOH A 705 . ? 1_555 ? 13 AC1 14 GLY B 149 ? GLY B 149 . ? 1_555 ? 14 AC1 14 PRO B 150 ? PRO B 150 . ? 1_555 ? 15 AC2 5 ASP A 144 ? ASP A 144 . ? 1_555 ? 16 AC2 5 THR A 146 ? THR A 146 . ? 1_555 ? 17 AC2 5 GLY B 10 ? GLY B 10 . ? 1_555 ? 18 AC2 5 ILE B 12 ? ILE B 12 . ? 1_555 ? 19 AC2 5 THR B 146 ? THR B 146 . ? 1_555 ? 20 AC3 15 GLY A 149 ? GLY A 149 . ? 1_555 ? 21 AC3 15 PRO A 150 ? PRO A 150 . ? 1_555 ? 22 AC3 15 LEU B 41 ? LEU B 41 . ? 1_555 ? 23 AC3 15 ILE B 43 ? ILE B 43 . ? 1_555 ? 24 AC3 15 SER B 87 ? SER B 87 . ? 1_555 ? 25 AC3 15 GLN B 88 ? GLN B 88 . ? 1_555 ? 26 AC3 15 PHE B 89 ? PHE B 89 . ? 1_555 ? 27 AC3 15 LYS B 107 ? LYS B 107 . ? 1_555 ? 28 AC3 15 PHE B 137 ? PHE B 137 . ? 1_555 ? 29 AC3 15 GLY B 138 ? GLY B 138 . ? 1_555 ? 30 AC3 15 ASN B 139 ? ASN B 139 . ? 1_555 ? 31 AC3 15 HOH G . ? HOH B 343 . ? 1_555 ? 32 AC3 15 HOH G . ? HOH B 345 . ? 1_555 ? 33 AC3 15 HOH G . ? HOH B 368 . ? 1_555 ? 34 AC3 15 HOH G . ? HOH B 393 . ? 1_555 ? # _atom_sites.entry_id 4NBI _atom_sites.fract_transf_matrix[1][1] 0.012175 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000702 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015211 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.017599 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 ARG 2 2 2 ARG ARG A . n A 1 3 VAL 3 3 3 VAL VAL A . n A 1 4 VAL 4 4 4 VAL VAL A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 GLN 6 6 6 GLN GLN A . n A 1 7 ARG 7 7 7 ARG ARG A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 LYS 9 9 9 LYS LYS A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 ALA 11 11 11 ALA ALA A . n A 1 12 ILE 12 12 12 ILE ILE A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 SER 14 14 14 SER SER A . n A 1 15 VAL 15 15 15 VAL VAL A . n A 1 16 ARG 16 16 16 ARG ARG A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 ASN 19 19 19 ASN ASN A . n A 1 20 ILE 20 20 20 ILE ILE A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 ASN 23 23 23 ASN ASN A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 GLU 26 26 26 GLU GLU A . n A 1 27 LEU 27 27 27 LEU LEU A . n A 1 28 GLU 28 28 28 GLU GLU A . n A 1 29 ILE 29 29 29 ILE ILE A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 GLU 32 32 32 GLU GLU A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 ASN 35 35 35 ASN ASN A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 LEU 37 37 37 LEU LEU A . n A 1 38 ILE 38 38 38 ILE ILE A . n A 1 39 CYS 39 39 39 CYS CYS A . n A 1 40 PHE 40 40 40 PHE PHE A . n A 1 41 LEU 41 41 41 LEU LEU A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 ILE 43 43 43 ILE ILE A . n A 1 44 HIS 44 44 44 HIS HIS A . n A 1 45 LYS 45 45 45 LYS LYS A . n A 1 46 ASN 46 46 46 ASN ASN A . n A 1 47 ASP 47 47 47 ASP ASP A . n A 1 48 THR 48 48 48 THR THR A . n A 1 49 TRP 49 49 49 TRP TRP A . n A 1 50 GLU 50 50 50 GLU GLU A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 LEU 53 53 53 LEU LEU A . n A 1 54 TYR 54 54 54 TYR TYR A . n A 1 55 ILE 55 55 55 ILE ILE A . n A 1 56 ILE 56 56 56 ILE ILE A . n A 1 57 ARG 57 57 57 ARG ARG A . n A 1 58 LYS 58 58 58 LYS LYS A . n A 1 59 CYS 59 59 59 CYS CYS A . n A 1 60 LEU 60 60 60 LEU LEU A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ARG 63 63 63 ARG ARG A . n A 1 64 LEU 64 64 64 LEU LEU A . n A 1 65 TRP 65 65 65 TRP TRP A . n A 1 66 ASN 66 66 66 ASN ASN A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ASN 69 69 69 ASN ASN A . n A 1 70 LYS 70 70 70 LYS LYS A . n A 1 71 THR 71 71 71 THR THR A . n A 1 72 TRP 72 72 72 TRP TRP A . n A 1 73 ASP 73 73 73 ASP ASP A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 ASN 75 75 75 ASN ASN A . n A 1 76 VAL 76 76 76 VAL VAL A . n A 1 77 LYS 77 77 77 LYS LYS A . n A 1 78 ASP 78 78 78 ASP ASP A . n A 1 79 LEU 79 79 79 LEU LEU A . n A 1 80 ASN 80 80 80 ASN ASN A . n A 1 81 TYR 81 81 81 TYR TYR A . n A 1 82 GLU 82 82 82 GLU GLU A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 ILE 85 85 85 ILE ILE A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 SER 87 87 87 SER SER A . n A 1 88 GLN 88 88 88 GLN GLN A . n A 1 89 PHE 89 89 89 PHE PHE A . n A 1 90 THR 90 90 90 THR THR A . n A 1 91 LEU 91 91 91 LEU LEU A . n A 1 92 PHE 92 92 92 PHE PHE A . n A 1 93 GLY 93 93 93 GLY GLY A . n A 1 94 ASN 94 94 94 ASN ASN A . n A 1 95 THR 95 95 95 THR THR A . n A 1 96 LYS 96 96 96 LYS LYS A . n A 1 97 LYS 97 97 97 LYS LYS A . n A 1 98 GLY 98 98 98 GLY GLY A . n A 1 99 ASN 99 99 99 ASN ASN A . n A 1 100 LYS 100 100 100 LYS LYS A . n A 1 101 PRO 101 101 101 PRO PRO A . n A 1 102 ASP 102 102 102 ASP ASP A . n A 1 103 PHE 103 103 103 PHE PHE A . n A 1 104 HIS 104 104 104 HIS HIS A . n A 1 105 LEU 105 105 105 LEU LEU A . n A 1 106 ALA 106 106 106 ALA ALA A . n A 1 107 LYS 107 107 107 LYS LYS A . n A 1 108 GLU 108 108 108 GLU GLU A . n A 1 109 PRO 109 109 109 PRO PRO A . n A 1 110 ASN 110 110 110 ASN ASN A . n A 1 111 GLU 111 111 111 GLU GLU A . n A 1 112 ALA 112 112 112 ALA ALA A . n A 1 113 LEU 113 113 113 LEU LEU A . n A 1 114 ILE 114 114 114 ILE ILE A . n A 1 115 PHE 115 115 115 PHE PHE A . n A 1 116 TYR 116 116 116 TYR TYR A . n A 1 117 ASN 117 117 117 ASN ASN A . n A 1 118 LYS 118 118 118 LYS LYS A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 ILE 120 120 120 ILE ILE A . n A 1 121 ASP 121 121 121 ASP ASP A . n A 1 122 GLU 122 122 122 GLU GLU A . n A 1 123 PHE 123 123 123 PHE PHE A . n A 1 124 LYS 124 124 124 LYS LYS A . n A 1 125 LYS 125 125 125 LYS LYS A . n A 1 126 GLN 126 126 126 GLN GLN A . n A 1 127 TYR 127 127 127 TYR TYR A . n A 1 128 ASN 128 128 128 ASN ASN A . n A 1 129 ASP 129 129 129 ASP ASP A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LYS 131 131 131 LYS LYS A . n A 1 132 ILE 132 132 132 ILE ILE A . n A 1 133 LYS 133 133 133 LYS LYS A . n A 1 134 ILE 134 134 134 ILE ILE A . n A 1 135 GLY 135 135 135 GLY GLY A . n A 1 136 LYS 136 136 136 LYS LYS A . n A 1 137 PHE 137 137 137 PHE PHE A . n A 1 138 GLY 138 138 138 GLY GLY A . n A 1 139 ASN 139 139 139 ASN ASN A . n A 1 140 TYR 140 140 140 TYR TYR A . n A 1 141 MET 141 141 141 MET MET A . n A 1 142 ASN 142 142 142 ASN ASN A . n A 1 143 ILE 143 143 143 ILE ILE A . n A 1 144 ASP 144 144 144 ASP ASP A . n A 1 145 VAL 145 145 145 VAL VAL A . n A 1 146 THR 146 146 146 THR THR A . n A 1 147 ASN 147 147 147 ASN ASN A . n A 1 148 ASP 148 148 148 ASP ASP A . n A 1 149 GLY 149 149 149 GLY GLY A . n A 1 150 PRO 150 150 150 PRO PRO A . n A 1 151 VAL 151 151 151 VAL VAL A . n A 1 152 THR 152 152 152 THR THR A . n A 1 153 ILE 153 153 153 ILE ILE A . n A 1 154 TYR 154 154 154 TYR TYR A . n A 1 155 ILE 155 155 155 ILE ILE A . n A 1 156 ASP 156 156 156 ASP ASP A . n A 1 157 THR 157 157 157 THR THR A . n A 1 158 HIS 158 158 158 HIS HIS A . n A 1 159 ASP 159 159 159 ASP ASP A . n A 1 160 ILE 160 160 160 ILE ILE A . n A 1 161 ASN 161 161 161 ASN ASN A . n A 1 162 LEU 162 162 162 LEU LEU A . n A 1 163 ASN 163 163 163 ASN ASN A . n A 1 164 LYS 164 164 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 ARG 2 2 2 ARG ARG B . n B 1 3 VAL 3 3 3 VAL VAL B . n B 1 4 VAL 4 4 4 VAL VAL B . n B 1 5 ILE 5 5 5 ILE ILE B . n B 1 6 GLN 6 6 6 GLN GLN B . n B 1 7 ARG 7 7 7 ARG ARG B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 LYS 9 9 9 LYS LYS B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 ALA 11 11 11 ALA ALA B . n B 1 12 ILE 12 12 12 ILE ILE B . n B 1 13 LEU 13 13 13 LEU LEU B . n B 1 14 SER 14 14 14 SER SER B . n B 1 15 VAL 15 15 15 VAL VAL B . n B 1 16 ARG 16 16 16 ARG ARG B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 GLU 18 18 ? ? ? B . n B 1 19 ASN 19 19 ? ? ? B . n B 1 20 ILE 20 20 ? ? ? B . n B 1 21 GLY 21 21 ? ? ? B . n B 1 22 GLU 22 22 ? ? ? B . n B 1 23 ASN 23 23 ? ? ? B . n B 1 24 GLU 24 24 ? ? ? B . n B 1 25 LYS 25 25 ? ? ? B . n B 1 26 GLU 26 26 ? ? ? B . n B 1 27 LEU 27 27 27 LEU LEU B . n B 1 28 GLU 28 28 28 GLU GLU B . n B 1 29 ILE 29 29 29 ILE ILE B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 SER 31 31 31 SER SER B . n B 1 32 GLU 32 32 32 GLU GLU B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 LYS 34 34 34 LYS LYS B . n B 1 35 ASN 35 35 35 ASN ASN B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 LEU 37 37 37 LEU LEU B . n B 1 38 ILE 38 38 38 ILE ILE B . n B 1 39 CYS 39 39 39 CYS CYS B . n B 1 40 PHE 40 40 40 PHE PHE B . n B 1 41 LEU 41 41 41 LEU LEU B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 ILE 43 43 43 ILE ILE B . n B 1 44 HIS 44 44 44 HIS HIS B . n B 1 45 LYS 45 45 45 LYS LYS B . n B 1 46 ASN 46 46 46 ASN ASN B . n B 1 47 ASP 47 47 47 ASP ASP B . n B 1 48 THR 48 48 48 THR THR B . n B 1 49 TRP 49 49 49 TRP TRP B . n B 1 50 GLU 50 50 50 GLU GLU B . n B 1 51 ASP 51 51 51 ASP ASP B . n B 1 52 ALA 52 52 52 ALA ALA B . n B 1 53 LEU 53 53 53 LEU LEU B . n B 1 54 TYR 54 54 54 TYR TYR B . n B 1 55 ILE 55 55 55 ILE ILE B . n B 1 56 ILE 56 56 56 ILE ILE B . n B 1 57 ARG 57 57 57 ARG ARG B . n B 1 58 LYS 58 58 58 LYS LYS B . n B 1 59 CYS 59 59 59 CYS CYS B . n B 1 60 LEU 60 60 60 LEU LEU B . n B 1 61 ASN 61 61 61 ASN ASN B . n B 1 62 LEU 62 62 62 LEU LEU B . n B 1 63 ARG 63 63 63 ARG ARG B . n B 1 64 LEU 64 64 64 LEU LEU B . n B 1 65 TRP 65 65 65 TRP TRP B . n B 1 66 ASN 66 66 66 ASN ASN B . n B 1 67 ASN 67 67 67 ASN ASN B . n B 1 68 ASP 68 68 68 ASP ASP B . n B 1 69 ASN 69 69 69 ASN ASN B . n B 1 70 LYS 70 70 70 LYS LYS B . n B 1 71 THR 71 71 71 THR THR B . n B 1 72 TRP 72 72 72 TRP TRP B . n B 1 73 ASP 73 73 73 ASP ASP B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 ASN 75 75 75 ASN ASN B . n B 1 76 VAL 76 76 76 VAL VAL B . n B 1 77 LYS 77 77 77 LYS LYS B . n B 1 78 ASP 78 78 78 ASP ASP B . n B 1 79 LEU 79 79 79 LEU LEU B . n B 1 80 ASN 80 80 80 ASN ASN B . n B 1 81 TYR 81 81 81 TYR TYR B . n B 1 82 GLU 82 82 82 GLU GLU B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 ILE 85 85 85 ILE ILE B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 SER 87 87 87 SER SER B . n B 1 88 GLN 88 88 88 GLN GLN B . n B 1 89 PHE 89 89 89 PHE PHE B . n B 1 90 THR 90 90 90 THR THR B . n B 1 91 LEU 91 91 91 LEU LEU B . n B 1 92 PHE 92 92 92 PHE PHE B . n B 1 93 GLY 93 93 93 GLY GLY B . n B 1 94 ASN 94 94 94 ASN ASN B . n B 1 95 THR 95 95 95 THR THR B . n B 1 96 LYS 96 96 96 LYS LYS B . n B 1 97 LYS 97 97 97 LYS LYS B . n B 1 98 GLY 98 98 98 GLY GLY B . n B 1 99 ASN 99 99 99 ASN ASN B . n B 1 100 LYS 100 100 100 LYS LYS B . n B 1 101 PRO 101 101 101 PRO PRO B . n B 1 102 ASP 102 102 102 ASP ASP B . n B 1 103 PHE 103 103 103 PHE PHE B . n B 1 104 HIS 104 104 104 HIS HIS B . n B 1 105 LEU 105 105 105 LEU LEU B . n B 1 106 ALA 106 106 106 ALA ALA B . n B 1 107 LYS 107 107 107 LYS LYS B . n B 1 108 GLU 108 108 108 GLU GLU B . n B 1 109 PRO 109 109 109 PRO PRO B . n B 1 110 ASN 110 110 110 ASN ASN B . n B 1 111 GLU 111 111 111 GLU GLU B . n B 1 112 ALA 112 112 112 ALA ALA B . n B 1 113 LEU 113 113 113 LEU LEU B . n B 1 114 ILE 114 114 114 ILE ILE B . n B 1 115 PHE 115 115 115 PHE PHE B . n B 1 116 TYR 116 116 116 TYR TYR B . n B 1 117 ASN 117 117 117 ASN ASN B . n B 1 118 LYS 118 118 118 LYS LYS B . n B 1 119 ILE 119 119 119 ILE ILE B . n B 1 120 ILE 120 120 120 ILE ILE B . n B 1 121 ASP 121 121 121 ASP ASP B . n B 1 122 GLU 122 122 122 GLU GLU B . n B 1 123 PHE 123 123 123 PHE PHE B . n B 1 124 LYS 124 124 124 LYS LYS B . n B 1 125 LYS 125 125 125 LYS LYS B . n B 1 126 GLN 126 126 126 GLN GLN B . n B 1 127 TYR 127 127 127 TYR TYR B . n B 1 128 ASN 128 128 128 ASN ASN B . n B 1 129 ASP 129 129 129 ASP ASP B . n B 1 130 ASP 130 130 130 ASP ASP B . n B 1 131 LYS 131 131 131 LYS LYS B . n B 1 132 ILE 132 132 132 ILE ILE B . n B 1 133 LYS 133 133 133 LYS LYS B . n B 1 134 ILE 134 134 134 ILE ILE B . n B 1 135 GLY 135 135 135 GLY GLY B . n B 1 136 LYS 136 136 136 LYS LYS B . n B 1 137 PHE 137 137 137 PHE PHE B . n B 1 138 GLY 138 138 138 GLY GLY B . n B 1 139 ASN 139 139 139 ASN ASN B . n B 1 140 TYR 140 140 140 TYR TYR B . n B 1 141 MET 141 141 141 MET MET B . n B 1 142 ASN 142 142 142 ASN ASN B . n B 1 143 ILE 143 143 143 ILE ILE B . n B 1 144 ASP 144 144 144 ASP ASP B . n B 1 145 VAL 145 145 145 VAL VAL B . n B 1 146 THR 146 146 146 THR THR B . n B 1 147 ASN 147 147 147 ASN ASN B . n B 1 148 ASP 148 148 148 ASP ASP B . n B 1 149 GLY 149 149 149 GLY GLY B . n B 1 150 PRO 150 150 150 PRO PRO B . n B 1 151 VAL 151 151 151 VAL VAL B . n B 1 152 THR 152 152 152 THR THR B . n B 1 153 ILE 153 153 153 ILE ILE B . n B 1 154 TYR 154 154 154 TYR TYR B . n B 1 155 ILE 155 155 155 ILE ILE B . n B 1 156 ASP 156 156 156 ASP ASP B . n B 1 157 THR 157 157 157 THR THR B . n B 1 158 HIS 158 158 158 HIS HIS B . n B 1 159 ASP 159 159 159 ASP ASP B . n B 1 160 ILE 160 160 160 ILE ILE B . n B 1 161 ASN 161 161 ? ? ? B . n B 1 162 LEU 162 162 ? ? ? B . n B 1 163 ASN 163 163 ? ? ? B . n B 1 164 LYS 164 164 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 D3Y 1 201 501 D3Y D3Y A . D 3 PGE 1 502 503 PGE PGE A . E 2 D3Y 1 201 502 D3Y D3Y B . F 4 HOH 1 601 2 HOH HOH A . F 4 HOH 2 602 3 HOH HOH A . F 4 HOH 3 603 4 HOH HOH A . F 4 HOH 4 604 6 HOH HOH A . F 4 HOH 5 605 7 HOH HOH A . F 4 HOH 6 606 9 HOH HOH A . F 4 HOH 7 607 15 HOH HOH A . F 4 HOH 8 608 17 HOH HOH A . F 4 HOH 9 609 19 HOH HOH A . F 4 HOH 10 610 20 HOH HOH A . F 4 HOH 11 611 21 HOH HOH A . F 4 HOH 12 612 24 HOH HOH A . F 4 HOH 13 613 27 HOH HOH A . F 4 HOH 14 614 28 HOH HOH A . F 4 HOH 15 615 31 HOH HOH A . F 4 HOH 16 616 33 HOH HOH A . F 4 HOH 17 617 34 HOH HOH A . F 4 HOH 18 618 38 HOH HOH A . F 4 HOH 19 619 40 HOH HOH A . F 4 HOH 20 620 42 HOH HOH A . F 4 HOH 21 621 46 HOH HOH A . F 4 HOH 22 622 47 HOH HOH A . F 4 HOH 23 623 51 HOH HOH A . F 4 HOH 24 624 53 HOH HOH A . F 4 HOH 25 625 54 HOH HOH A . F 4 HOH 26 626 55 HOH HOH A . F 4 HOH 27 627 56 HOH HOH A . F 4 HOH 28 628 57 HOH HOH A . F 4 HOH 29 629 58 HOH HOH A . F 4 HOH 30 630 59 HOH HOH A . F 4 HOH 31 631 60 HOH HOH A . F 4 HOH 32 632 62 HOH HOH A . F 4 HOH 33 633 63 HOH HOH A . F 4 HOH 34 634 65 HOH HOH A . F 4 HOH 35 635 67 HOH HOH A . F 4 HOH 36 636 71 HOH HOH A . F 4 HOH 37 637 73 HOH HOH A . F 4 HOH 38 638 74 HOH HOH A . F 4 HOH 39 639 75 HOH HOH A . F 4 HOH 40 640 77 HOH HOH A . F 4 HOH 41 641 78 HOH HOH A . F 4 HOH 42 642 79 HOH HOH A . F 4 HOH 43 643 81 HOH HOH A . F 4 HOH 44 644 82 HOH HOH A . F 4 HOH 45 645 85 HOH HOH A . F 4 HOH 46 646 88 HOH HOH A . F 4 HOH 47 647 99 HOH HOH A . F 4 HOH 48 648 101 HOH HOH A . F 4 HOH 49 649 105 HOH HOH A . F 4 HOH 50 650 106 HOH HOH A . F 4 HOH 51 651 107 HOH HOH A . F 4 HOH 52 652 108 HOH HOH A . F 4 HOH 53 653 113 HOH HOH A . F 4 HOH 54 654 117 HOH HOH A . F 4 HOH 55 655 118 HOH HOH A . F 4 HOH 56 656 119 HOH HOH A . F 4 HOH 57 657 120 HOH HOH A . F 4 HOH 58 658 122 HOH HOH A . F 4 HOH 59 659 123 HOH HOH A . F 4 HOH 60 660 125 HOH HOH A . F 4 HOH 61 661 128 HOH HOH A . F 4 HOH 62 662 130 HOH HOH A . F 4 HOH 63 663 131 HOH HOH A . F 4 HOH 64 664 132 HOH HOH A . F 4 HOH 65 665 133 HOH HOH A . F 4 HOH 66 666 135 HOH HOH A . F 4 HOH 67 667 138 HOH HOH A . F 4 HOH 68 668 139 HOH HOH A . F 4 HOH 69 669 140 HOH HOH A . F 4 HOH 70 670 141 HOH HOH A . F 4 HOH 71 671 143 HOH HOH A . F 4 HOH 72 672 147 HOH HOH A . F 4 HOH 73 673 150 HOH HOH A . F 4 HOH 74 674 151 HOH HOH A . F 4 HOH 75 675 153 HOH HOH A . F 4 HOH 76 676 154 HOH HOH A . F 4 HOH 77 677 157 HOH HOH A . F 4 HOH 78 678 158 HOH HOH A . F 4 HOH 79 679 159 HOH HOH A . F 4 HOH 80 680 165 HOH HOH A . F 4 HOH 81 681 168 HOH HOH A . F 4 HOH 82 682 176 HOH HOH A . F 4 HOH 83 683 178 HOH HOH A . F 4 HOH 84 684 179 HOH HOH A . F 4 HOH 85 685 181 HOH HOH A . F 4 HOH 86 686 182 HOH HOH A . F 4 HOH 87 687 183 HOH HOH A . F 4 HOH 88 688 184 HOH HOH A . F 4 HOH 89 689 185 HOH HOH A . F 4 HOH 90 690 189 HOH HOH A . F 4 HOH 91 691 193 HOH HOH A . F 4 HOH 92 692 195 HOH HOH A . F 4 HOH 93 693 198 HOH HOH A . F 4 HOH 94 694 200 HOH HOH A . F 4 HOH 95 695 203 HOH HOH A . F 4 HOH 96 696 204 HOH HOH A . F 4 HOH 97 697 205 HOH HOH A . F 4 HOH 98 698 207 HOH HOH A . F 4 HOH 99 699 210 HOH HOH A . F 4 HOH 100 700 213 HOH HOH A . F 4 HOH 101 701 218 HOH HOH A . F 4 HOH 102 702 221 HOH HOH A . F 4 HOH 103 703 222 HOH HOH A . F 4 HOH 104 704 224 HOH HOH A . F 4 HOH 105 705 225 HOH HOH A . F 4 HOH 106 706 228 HOH HOH A . F 4 HOH 107 707 229 HOH HOH A . F 4 HOH 108 708 231 HOH HOH A . F 4 HOH 109 709 232 HOH HOH A . F 4 HOH 110 710 234 HOH HOH A . F 4 HOH 111 711 235 HOH HOH A . F 4 HOH 112 712 236 HOH HOH A . F 4 HOH 113 713 237 HOH HOH A . F 4 HOH 114 714 240 HOH HOH A . F 4 HOH 115 715 241 HOH HOH A . F 4 HOH 116 716 243 HOH HOH A . F 4 HOH 117 717 247 HOH HOH A . F 4 HOH 118 718 249 HOH HOH A . F 4 HOH 119 719 250 HOH HOH A . F 4 HOH 120 720 254 HOH HOH A . F 4 HOH 121 721 255 HOH HOH A . F 4 HOH 122 722 256 HOH HOH A . F 4 HOH 123 723 258 HOH HOH A . F 4 HOH 124 724 259 HOH HOH A . F 4 HOH 125 725 266 HOH HOH A . F 4 HOH 126 726 269 HOH HOH A . F 4 HOH 127 727 277 HOH HOH A . F 4 HOH 128 728 284 HOH HOH A . F 4 HOH 129 729 293 HOH HOH A . F 4 HOH 130 730 294 HOH HOH A . F 4 HOH 131 731 295 HOH HOH A . F 4 HOH 132 732 296 HOH HOH A . F 4 HOH 133 733 297 HOH HOH A . F 4 HOH 134 734 298 HOH HOH A . F 4 HOH 135 735 299 HOH HOH A . F 4 HOH 136 736 302 HOH HOH A . F 4 HOH 137 737 303 HOH HOH A . F 4 HOH 138 738 304 HOH HOH A . G 4 HOH 1 301 1 HOH HOH B . G 4 HOH 2 302 5 HOH HOH B . G 4 HOH 3 303 8 HOH HOH B . G 4 HOH 4 304 10 HOH HOH B . G 4 HOH 5 305 11 HOH HOH B . G 4 HOH 6 306 12 HOH HOH B . G 4 HOH 7 307 13 HOH HOH B . G 4 HOH 8 308 14 HOH HOH B . G 4 HOH 9 309 16 HOH HOH B . G 4 HOH 10 310 18 HOH HOH B . G 4 HOH 11 311 22 HOH HOH B . G 4 HOH 12 312 23 HOH HOH B . G 4 HOH 13 313 25 HOH HOH B . G 4 HOH 14 314 26 HOH HOH B . G 4 HOH 15 315 29 HOH HOH B . G 4 HOH 16 316 30 HOH HOH B . G 4 HOH 17 317 32 HOH HOH B . G 4 HOH 18 318 35 HOH HOH B . G 4 HOH 19 319 36 HOH HOH B . G 4 HOH 20 320 37 HOH HOH B . G 4 HOH 21 321 39 HOH HOH B . G 4 HOH 22 322 41 HOH HOH B . G 4 HOH 23 323 44 HOH HOH B . G 4 HOH 24 324 45 HOH HOH B . G 4 HOH 25 325 48 HOH HOH B . G 4 HOH 26 326 49 HOH HOH B . G 4 HOH 27 327 50 HOH HOH B . G 4 HOH 28 328 61 HOH HOH B . G 4 HOH 29 329 64 HOH HOH B . G 4 HOH 30 330 66 HOH HOH B . G 4 HOH 31 331 68 HOH HOH B . G 4 HOH 32 332 69 HOH HOH B . G 4 HOH 33 333 72 HOH HOH B . G 4 HOH 34 334 76 HOH HOH B . G 4 HOH 35 335 80 HOH HOH B . G 4 HOH 36 336 83 HOH HOH B . G 4 HOH 37 337 84 HOH HOH B . G 4 HOH 38 338 86 HOH HOH B . G 4 HOH 39 339 87 HOH HOH B . G 4 HOH 40 340 89 HOH HOH B . G 4 HOH 41 341 90 HOH HOH B . G 4 HOH 42 342 91 HOH HOH B . G 4 HOH 43 343 92 HOH HOH B . G 4 HOH 44 344 93 HOH HOH B . G 4 HOH 45 345 94 HOH HOH B . G 4 HOH 46 346 95 HOH HOH B . G 4 HOH 47 347 96 HOH HOH B . G 4 HOH 48 348 97 HOH HOH B . G 4 HOH 49 349 98 HOH HOH B . G 4 HOH 50 350 100 HOH HOH B . G 4 HOH 51 351 102 HOH HOH B . G 4 HOH 52 352 103 HOH HOH B . G 4 HOH 53 353 104 HOH HOH B . G 4 HOH 54 354 109 HOH HOH B . G 4 HOH 55 355 112 HOH HOH B . G 4 HOH 56 356 114 HOH HOH B . G 4 HOH 57 357 115 HOH HOH B . G 4 HOH 58 358 116 HOH HOH B . G 4 HOH 59 359 124 HOH HOH B . G 4 HOH 60 360 129 HOH HOH B . G 4 HOH 61 361 137 HOH HOH B . G 4 HOH 62 362 142 HOH HOH B . G 4 HOH 63 363 144 HOH HOH B . G 4 HOH 64 364 145 HOH HOH B . G 4 HOH 65 365 146 HOH HOH B . G 4 HOH 66 366 148 HOH HOH B . G 4 HOH 67 367 152 HOH HOH B . G 4 HOH 68 368 155 HOH HOH B . G 4 HOH 69 369 160 HOH HOH B . G 4 HOH 70 370 163 HOH HOH B . G 4 HOH 71 371 164 HOH HOH B . G 4 HOH 72 372 167 HOH HOH B . G 4 HOH 73 373 169 HOH HOH B . G 4 HOH 74 374 170 HOH HOH B . G 4 HOH 75 375 171 HOH HOH B . G 4 HOH 76 376 172 HOH HOH B . G 4 HOH 77 377 175 HOH HOH B . G 4 HOH 78 378 177 HOH HOH B . G 4 HOH 79 379 180 HOH HOH B . G 4 HOH 80 380 186 HOH HOH B . G 4 HOH 81 381 187 HOH HOH B . G 4 HOH 82 382 188 HOH HOH B . G 4 HOH 83 383 190 HOH HOH B . G 4 HOH 84 384 191 HOH HOH B . G 4 HOH 85 385 194 HOH HOH B . G 4 HOH 86 386 196 HOH HOH B . G 4 HOH 87 387 197 HOH HOH B . G 4 HOH 88 388 199 HOH HOH B . G 4 HOH 89 389 206 HOH HOH B . G 4 HOH 90 390 208 HOH HOH B . G 4 HOH 91 391 209 HOH HOH B . G 4 HOH 92 392 212 HOH HOH B . G 4 HOH 93 393 214 HOH HOH B . G 4 HOH 94 394 215 HOH HOH B . G 4 HOH 95 395 219 HOH HOH B . G 4 HOH 96 396 220 HOH HOH B . G 4 HOH 97 397 226 HOH HOH B . G 4 HOH 98 398 230 HOH HOH B . G 4 HOH 99 399 233 HOH HOH B . G 4 HOH 100 400 239 HOH HOH B . G 4 HOH 101 401 251 HOH HOH B . G 4 HOH 102 402 252 HOH HOH B . G 4 HOH 103 403 262 HOH HOH B . G 4 HOH 104 404 264 HOH HOH B . G 4 HOH 105 405 265 HOH HOH B . G 4 HOH 106 406 267 HOH HOH B . G 4 HOH 107 407 271 HOH HOH B . G 4 HOH 108 408 276 HOH HOH B . G 4 HOH 109 409 291 HOH HOH B . G 4 HOH 110 410 292 HOH HOH B . G 4 HOH 111 411 300 HOH HOH B . G 4 HOH 112 412 301 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 3790 ? 1 MORE -10 ? 1 'SSA (A^2)' 14440 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-12-18 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-11-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 3 'Structure model' Advisory 4 3 'Structure model' 'Data collection' 5 3 'Structure model' 'Database references' 6 3 'Structure model' 'Derived calculations' 7 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' pdbx_unobs_or_zero_occ_atoms 2 2 'Structure model' software 3 3 'Structure model' chem_comp_atom 4 3 'Structure model' chem_comp_bond 5 3 'Structure model' database_2 6 3 'Structure model' pdbx_initial_refinement_model 7 3 'Structure model' pdbx_unobs_or_zero_occ_atoms 8 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 4 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 5 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 REFMAC 5.6.0117 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MAR345dtb . ? ? ? ? 'data collection' ? ? ? 6 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 7 HKL-2000 . ? ? ? ? 'data scaling' ? ? ? 8 MOLREP . ? ? ? ? phasing ? ? ? 9 PHASER . ? ? ? ? phasing ? ? ? # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG A GLU 32 ? ? CD A GLU 32 ? ? 1.406 1.515 -0.109 0.015 N 2 1 CA A ASN 69 ? ? CB A ASN 69 ? ? 1.709 1.527 0.182 0.026 N # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 N _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ASN _pdbx_validate_rmsd_angle.auth_seq_id_1 69 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ASN _pdbx_validate_rmsd_angle.auth_seq_id_2 69 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 CB _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ASN _pdbx_validate_rmsd_angle.auth_seq_id_3 69 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 82.88 _pdbx_validate_rmsd_angle.angle_target_value 110.60 _pdbx_validate_rmsd_angle.angle_deviation -27.72 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.80 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 34 ? ? -94.08 -135.58 2 1 ASN A 67 ? ? -92.46 -113.13 3 1 TYR A 127 ? ? -117.47 -109.41 4 1 LYS B 34 ? ? -94.71 -134.63 5 1 PHE B 92 ? ? -110.12 65.31 6 1 PHE B 103 ? ? -97.04 42.05 7 1 TYR B 127 ? ? -114.51 -113.51 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 A GLU 28 ? CB ? A GLU 28 CB 2 1 Y 0 A GLU 28 ? CG ? A GLU 28 CG 3 1 Y 0 A GLU 28 ? CD ? A GLU 28 CD 4 1 Y 0 A GLU 28 ? OE1 ? A GLU 28 OE1 5 1 Y 0 A GLU 28 ? OE2 ? A GLU 28 OE2 6 1 Y 0 A GLU 32 ? CD ? A GLU 32 CD 7 1 Y 0 A GLU 32 ? OE1 ? A GLU 32 OE1 8 1 Y 0 A GLU 32 ? OE2 ? A GLU 32 OE2 9 1 Y 0 A LYS 34 ? CE ? A LYS 34 CE 10 1 Y 0 A LYS 34 ? NZ ? A LYS 34 NZ 11 1 Y 0 A LYS 45 ? CE ? A LYS 45 CE 12 1 Y 0 A LYS 45 ? NZ ? A LYS 45 NZ 13 1 Y 0 A ASN 69 ? CB ? A ASN 69 CB 14 1 Y 0 A ASN 69 ? CG ? A ASN 69 CG 15 1 Y 0 A ASN 69 ? OD1 ? A ASN 69 OD1 16 1 Y 0 A ASN 69 ? ND2 ? A ASN 69 ND2 17 1 Y 0 B ASN 94 ? CG ? B ASN 94 CG 18 1 Y 0 B ASN 94 ? OD1 ? B ASN 94 OD1 19 1 Y 0 B ASN 94 ? ND2 ? B ASN 94 ND2 20 1 Y 0 B LYS 97 ? CD ? B LYS 97 CD 21 1 Y 0 B LYS 97 ? CE ? B LYS 97 CE 22 1 Y 0 B LYS 97 ? NZ ? B LYS 97 NZ 23 1 Y 0 B ASP 102 ? CB ? B ASP 102 CB 24 1 Y 0 B ASP 102 ? CG ? B ASP 102 CG 25 1 Y 0 B ASP 102 ? OD1 ? B ASP 102 OD1 26 1 Y 0 B ASP 102 ? OD2 ? B ASP 102 OD2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A LYS 164 ? A LYS 164 2 1 Y 1 B GLU 18 ? B GLU 18 3 1 Y 1 B ASN 19 ? B ASN 19 4 1 Y 1 B ILE 20 ? B ILE 20 5 1 Y 1 B GLY 21 ? B GLY 21 6 1 Y 1 B GLU 22 ? B GLU 22 7 1 Y 1 B ASN 23 ? B ASN 23 8 1 Y 1 B GLU 24 ? B GLU 24 9 1 Y 1 B LYS 25 ? B LYS 25 10 1 Y 1 B GLU 26 ? B GLU 26 11 1 Y 1 B ASN 161 ? B ASN 161 12 1 Y 1 B LEU 162 ? B LEU 162 13 1 Y 1 B ASN 163 ? B ASN 163 14 1 Y 1 B LYS 164 ? B LYS 164 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 D3Y CD1 C Y N 88 D3Y CE1 C Y N 89 D3Y CZ C Y N 90 D3Y OH O N N 91 D3Y CE2 C Y N 92 D3Y CD2 C Y N 93 D3Y CG C Y N 94 D3Y CB C N N 95 D3Y CA C N R 96 D3Y N N N N 97 D3Y C C N N 98 D3Y O O N N 99 D3Y N8 N N N 100 D3Y "C3'" C N S 101 D3Y "C2'" C N R 102 D3Y "O2'" O N N 103 D3Y "C4'" C N S 104 D3Y "C5'" C N N 105 D3Y "O5'" O N N 106 D3Y "O4'" O N N 107 D3Y "C1'" C N R 108 D3Y N9 N Y N 109 D3Y C8 C Y N 110 D3Y N7 N Y N 111 D3Y C5 C Y N 112 D3Y C4 C Y N 113 D3Y N3 N Y N 114 D3Y C2 C Y N 115 D3Y N1 N Y N 116 D3Y C6 C Y N 117 D3Y N6 N N N 118 D3Y H1 H N N 119 D3Y H2 H N N 120 D3Y H3 H N N 121 D3Y H4 H N N 122 D3Y H5 H N N 123 D3Y H6 H N N 124 D3Y H7 H N N 125 D3Y H8 H N N 126 D3Y H9 H N N 127 D3Y H10 H N N 128 D3Y H12 H N N 129 D3Y H13 H N N 130 D3Y H14 H N N 131 D3Y H15 H N N 132 D3Y H16 H N N 133 D3Y H17 H N N 134 D3Y H18 H N N 135 D3Y H19 H N N 136 D3Y H20 H N N 137 D3Y H21 H N N 138 D3Y H22 H N N 139 D3Y H23 H N N 140 D3Y H24 H N N 141 GLN N N N N 142 GLN CA C N S 143 GLN C C N N 144 GLN O O N N 145 GLN CB C N N 146 GLN CG C N N 147 GLN CD C N N 148 GLN OE1 O N N 149 GLN NE2 N N N 150 GLN OXT O N N 151 GLN H H N N 152 GLN H2 H N N 153 GLN HA H N N 154 GLN HB2 H N N 155 GLN HB3 H N N 156 GLN HG2 H N N 157 GLN HG3 H N N 158 GLN HE21 H N N 159 GLN HE22 H N N 160 GLN HXT H N N 161 GLU N N N N 162 GLU CA C N S 163 GLU C C N N 164 GLU O O N N 165 GLU CB C N N 166 GLU CG C N N 167 GLU CD C N N 168 GLU OE1 O N N 169 GLU OE2 O N N 170 GLU OXT O N N 171 GLU H H N N 172 GLU H2 H N N 173 GLU HA H N N 174 GLU HB2 H N N 175 GLU HB3 H N N 176 GLU HG2 H N N 177 GLU HG3 H N N 178 GLU HE2 H N N 179 GLU HXT H N N 180 GLY N N N N 181 GLY CA C N N 182 GLY C C N N 183 GLY O O N N 184 GLY OXT O N N 185 GLY H H N N 186 GLY H2 H N N 187 GLY HA2 H N N 188 GLY HA3 H N N 189 GLY HXT H N N 190 HIS N N N N 191 HIS CA C N S 192 HIS C C N N 193 HIS O O N N 194 HIS CB C N N 195 HIS CG C Y N 196 HIS ND1 N Y N 197 HIS CD2 C Y N 198 HIS CE1 C Y N 199 HIS NE2 N Y N 200 HIS OXT O N N 201 HIS H H N N 202 HIS H2 H N N 203 HIS HA H N N 204 HIS HB2 H N N 205 HIS HB3 H N N 206 HIS HD1 H N N 207 HIS HD2 H N N 208 HIS HE1 H N N 209 HIS HE2 H N N 210 HIS HXT H N N 211 HOH O O N N 212 HOH H1 H N N 213 HOH H2 H N N 214 ILE N N N N 215 ILE CA C N S 216 ILE C C N N 217 ILE O O N N 218 ILE CB C N S 219 ILE CG1 C N N 220 ILE CG2 C N N 221 ILE CD1 C N N 222 ILE OXT O N N 223 ILE H H N N 224 ILE H2 H N N 225 ILE HA H N N 226 ILE HB H N N 227 ILE HG12 H N N 228 ILE HG13 H N N 229 ILE HG21 H N N 230 ILE HG22 H N N 231 ILE HG23 H N N 232 ILE HD11 H N N 233 ILE HD12 H N N 234 ILE HD13 H N N 235 ILE HXT H N N 236 LEU N N N N 237 LEU CA C N S 238 LEU C C N N 239 LEU O O N N 240 LEU CB C N N 241 LEU CG C N N 242 LEU CD1 C N N 243 LEU CD2 C N N 244 LEU OXT O N N 245 LEU H H N N 246 LEU H2 H N N 247 LEU HA H N N 248 LEU HB2 H N N 249 LEU HB3 H N N 250 LEU HG H N N 251 LEU HD11 H N N 252 LEU HD12 H N N 253 LEU HD13 H N N 254 LEU HD21 H N N 255 LEU HD22 H N N 256 LEU HD23 H N N 257 LEU HXT H N N 258 LYS N N N N 259 LYS CA C N S 260 LYS C C N N 261 LYS O O N N 262 LYS CB C N N 263 LYS CG C N N 264 LYS CD C N N 265 LYS CE C N N 266 LYS NZ N N N 267 LYS OXT O N N 268 LYS H H N N 269 LYS H2 H N N 270 LYS HA H N N 271 LYS HB2 H N N 272 LYS HB3 H N N 273 LYS HG2 H N N 274 LYS HG3 H N N 275 LYS HD2 H N N 276 LYS HD3 H N N 277 LYS HE2 H N N 278 LYS HE3 H N N 279 LYS HZ1 H N N 280 LYS HZ2 H N N 281 LYS HZ3 H N N 282 LYS HXT H N N 283 MET N N N N 284 MET CA C N S 285 MET C C N N 286 MET O O N N 287 MET CB C N N 288 MET CG C N N 289 MET SD S N N 290 MET CE C N N 291 MET OXT O N N 292 MET H H N N 293 MET H2 H N N 294 MET HA H N N 295 MET HB2 H N N 296 MET HB3 H N N 297 MET HG2 H N N 298 MET HG3 H N N 299 MET HE1 H N N 300 MET HE2 H N N 301 MET HE3 H N N 302 MET HXT H N N 303 PGE C1 C N N 304 PGE O1 O N N 305 PGE C2 C N N 306 PGE O2 O N N 307 PGE C3 C N N 308 PGE C4 C N N 309 PGE O4 O N N 310 PGE C6 C N N 311 PGE C5 C N N 312 PGE O3 O N N 313 PGE H1 H N N 314 PGE H12 H N N 315 PGE HO1 H N N 316 PGE H2 H N N 317 PGE H22 H N N 318 PGE H3 H N N 319 PGE H32 H N N 320 PGE H4 H N N 321 PGE H42 H N N 322 PGE HO4 H N N 323 PGE H6 H N N 324 PGE H62 H N N 325 PGE H5 H N N 326 PGE H52 H N N 327 PHE N N N N 328 PHE CA C N S 329 PHE C C N N 330 PHE O O N N 331 PHE CB C N N 332 PHE CG C Y N 333 PHE CD1 C Y N 334 PHE CD2 C Y N 335 PHE CE1 C Y N 336 PHE CE2 C Y N 337 PHE CZ C Y N 338 PHE OXT O N N 339 PHE H H N N 340 PHE H2 H N N 341 PHE HA H N N 342 PHE HB2 H N N 343 PHE HB3 H N N 344 PHE HD1 H N N 345 PHE HD2 H N N 346 PHE HE1 H N N 347 PHE HE2 H N N 348 PHE HZ H N N 349 PHE HXT H N N 350 PRO N N N N 351 PRO CA C N S 352 PRO C C N N 353 PRO O O N N 354 PRO CB C N N 355 PRO CG C N N 356 PRO CD C N N 357 PRO OXT O N N 358 PRO H H N N 359 PRO HA H N N 360 PRO HB2 H N N 361 PRO HB3 H N N 362 PRO HG2 H N N 363 PRO HG3 H N N 364 PRO HD2 H N N 365 PRO HD3 H N N 366 PRO HXT H N N 367 SER N N N N 368 SER CA C N S 369 SER C C N N 370 SER O O N N 371 SER CB C N N 372 SER OG O N N 373 SER OXT O N N 374 SER H H N N 375 SER H2 H N N 376 SER HA H N N 377 SER HB2 H N N 378 SER HB3 H N N 379 SER HG H N N 380 SER HXT H N N 381 THR N N N N 382 THR CA C N S 383 THR C C N N 384 THR O O N N 385 THR CB C N R 386 THR OG1 O N N 387 THR CG2 C N N 388 THR OXT O N N 389 THR H H N N 390 THR H2 H N N 391 THR HA H N N 392 THR HB H N N 393 THR HG1 H N N 394 THR HG21 H N N 395 THR HG22 H N N 396 THR HG23 H N N 397 THR HXT H N N 398 TRP N N N N 399 TRP CA C N S 400 TRP C C N N 401 TRP O O N N 402 TRP CB C N N 403 TRP CG C Y N 404 TRP CD1 C Y N 405 TRP CD2 C Y N 406 TRP NE1 N Y N 407 TRP CE2 C Y N 408 TRP CE3 C Y N 409 TRP CZ2 C Y N 410 TRP CZ3 C Y N 411 TRP CH2 C Y N 412 TRP OXT O N N 413 TRP H H N N 414 TRP H2 H N N 415 TRP HA H N N 416 TRP HB2 H N N 417 TRP HB3 H N N 418 TRP HD1 H N N 419 TRP HE1 H N N 420 TRP HE3 H N N 421 TRP HZ2 H N N 422 TRP HZ3 H N N 423 TRP HH2 H N N 424 TRP HXT H N N 425 TYR N N N N 426 TYR CA C N S 427 TYR C C N N 428 TYR O O N N 429 TYR CB C N N 430 TYR CG C Y N 431 TYR CD1 C Y N 432 TYR CD2 C Y N 433 TYR CE1 C Y N 434 TYR CE2 C Y N 435 TYR CZ C Y N 436 TYR OH O N N 437 TYR OXT O N N 438 TYR H H N N 439 TYR H2 H N N 440 TYR HA H N N 441 TYR HB2 H N N 442 TYR HB3 H N N 443 TYR HD1 H N N 444 TYR HD2 H N N 445 TYR HE1 H N N 446 TYR HE2 H N N 447 TYR HH H N N 448 TYR HXT H N N 449 VAL N N N N 450 VAL CA C N S 451 VAL C C N N 452 VAL O O N N 453 VAL CB C N N 454 VAL CG1 C N N 455 VAL CG2 C N N 456 VAL OXT O N N 457 VAL H H N N 458 VAL H2 H N N 459 VAL HA H N N 460 VAL HB H N N 461 VAL HG11 H N N 462 VAL HG12 H N N 463 VAL HG13 H N N 464 VAL HG21 H N N 465 VAL HG22 H N N 466 VAL HG23 H N N 467 VAL HXT H N N 468 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 D3Y "O4'" "C4'" sing N N 83 D3Y "O4'" "C1'" sing N N 84 D3Y "C5'" "C4'" sing N N 85 D3Y "C5'" "O5'" sing N N 86 D3Y "C4'" "C3'" sing N N 87 D3Y OH CZ sing N N 88 D3Y "O2'" "C2'" sing N N 89 D3Y "C1'" "C2'" sing N N 90 D3Y "C1'" N9 sing N N 91 D3Y N CA sing N N 92 D3Y CZ CE2 doub Y N 93 D3Y CZ CE1 sing Y N 94 D3Y CE2 CD2 sing Y N 95 D3Y "C2'" "C3'" sing N N 96 D3Y "C3'" N8 sing N N 97 D3Y N8 C sing N N 98 D3Y C8 N9 sing Y N 99 D3Y C8 N7 doub Y N 100 D3Y CE1 CD1 doub Y N 101 D3Y N9 C4 sing Y N 102 D3Y CD2 CG doub Y N 103 D3Y CD1 CG sing Y N 104 D3Y CG CB sing N N 105 D3Y CA C sing N N 106 D3Y CA CB sing N N 107 D3Y N7 C5 sing Y N 108 D3Y C O doub N N 109 D3Y C4 C5 doub Y N 110 D3Y C4 N3 sing Y N 111 D3Y C5 C6 sing Y N 112 D3Y N3 C2 doub Y N 113 D3Y C6 N6 sing N N 114 D3Y C6 N1 doub Y N 115 D3Y C2 N1 sing Y N 116 D3Y CD1 H1 sing N N 117 D3Y CE1 H2 sing N N 118 D3Y OH H3 sing N N 119 D3Y CE2 H4 sing N N 120 D3Y CD2 H5 sing N N 121 D3Y CB H6 sing N N 122 D3Y CB H7 sing N N 123 D3Y CA H8 sing N N 124 D3Y N H9 sing N N 125 D3Y N H10 sing N N 126 D3Y N8 H12 sing N N 127 D3Y "C3'" H13 sing N N 128 D3Y "C2'" H14 sing N N 129 D3Y "O2'" H15 sing N N 130 D3Y "C4'" H16 sing N N 131 D3Y "C5'" H17 sing N N 132 D3Y "C5'" H18 sing N N 133 D3Y "O5'" H19 sing N N 134 D3Y "C1'" H20 sing N N 135 D3Y C8 H21 sing N N 136 D3Y C2 H22 sing N N 137 D3Y N6 H23 sing N N 138 D3Y N6 H24 sing N N 139 GLN N CA sing N N 140 GLN N H sing N N 141 GLN N H2 sing N N 142 GLN CA C sing N N 143 GLN CA CB sing N N 144 GLN CA HA sing N N 145 GLN C O doub N N 146 GLN C OXT sing N N 147 GLN CB CG sing N N 148 GLN CB HB2 sing N N 149 GLN CB HB3 sing N N 150 GLN CG CD sing N N 151 GLN CG HG2 sing N N 152 GLN CG HG3 sing N N 153 GLN CD OE1 doub N N 154 GLN CD NE2 sing N N 155 GLN NE2 HE21 sing N N 156 GLN NE2 HE22 sing N N 157 GLN OXT HXT sing N N 158 GLU N CA sing N N 159 GLU N H sing N N 160 GLU N H2 sing N N 161 GLU CA C sing N N 162 GLU CA CB sing N N 163 GLU CA HA sing N N 164 GLU C O doub N N 165 GLU C OXT sing N N 166 GLU CB CG sing N N 167 GLU CB HB2 sing N N 168 GLU CB HB3 sing N N 169 GLU CG CD sing N N 170 GLU CG HG2 sing N N 171 GLU CG HG3 sing N N 172 GLU CD OE1 doub N N 173 GLU CD OE2 sing N N 174 GLU OE2 HE2 sing N N 175 GLU OXT HXT sing N N 176 GLY N CA sing N N 177 GLY N H sing N N 178 GLY N H2 sing N N 179 GLY CA C sing N N 180 GLY CA HA2 sing N N 181 GLY CA HA3 sing N N 182 GLY C O doub N N 183 GLY C OXT sing N N 184 GLY OXT HXT sing N N 185 HIS N CA sing N N 186 HIS N H sing N N 187 HIS N H2 sing N N 188 HIS CA C sing N N 189 HIS CA CB sing N N 190 HIS CA HA sing N N 191 HIS C O doub N N 192 HIS C OXT sing N N 193 HIS CB CG sing N N 194 HIS CB HB2 sing N N 195 HIS CB HB3 sing N N 196 HIS CG ND1 sing Y N 197 HIS CG CD2 doub Y N 198 HIS ND1 CE1 doub Y N 199 HIS ND1 HD1 sing N N 200 HIS CD2 NE2 sing Y N 201 HIS CD2 HD2 sing N N 202 HIS CE1 NE2 sing Y N 203 HIS CE1 HE1 sing N N 204 HIS NE2 HE2 sing N N 205 HIS OXT HXT sing N N 206 HOH O H1 sing N N 207 HOH O H2 sing N N 208 ILE N CA sing N N 209 ILE N H sing N N 210 ILE N H2 sing N N 211 ILE CA C sing N N 212 ILE CA CB sing N N 213 ILE CA HA sing N N 214 ILE C O doub N N 215 ILE C OXT sing N N 216 ILE CB CG1 sing N N 217 ILE CB CG2 sing N N 218 ILE CB HB sing N N 219 ILE CG1 CD1 sing N N 220 ILE CG1 HG12 sing N N 221 ILE CG1 HG13 sing N N 222 ILE CG2 HG21 sing N N 223 ILE CG2 HG22 sing N N 224 ILE CG2 HG23 sing N N 225 ILE CD1 HD11 sing N N 226 ILE CD1 HD12 sing N N 227 ILE CD1 HD13 sing N N 228 ILE OXT HXT sing N N 229 LEU N CA sing N N 230 LEU N H sing N N 231 LEU N H2 sing N N 232 LEU CA C sing N N 233 LEU CA CB sing N N 234 LEU CA HA sing N N 235 LEU C O doub N N 236 LEU C OXT sing N N 237 LEU CB CG sing N N 238 LEU CB HB2 sing N N 239 LEU CB HB3 sing N N 240 LEU CG CD1 sing N N 241 LEU CG CD2 sing N N 242 LEU CG HG sing N N 243 LEU CD1 HD11 sing N N 244 LEU CD1 HD12 sing N N 245 LEU CD1 HD13 sing N N 246 LEU CD2 HD21 sing N N 247 LEU CD2 HD22 sing N N 248 LEU CD2 HD23 sing N N 249 LEU OXT HXT sing N N 250 LYS N CA sing N N 251 LYS N H sing N N 252 LYS N H2 sing N N 253 LYS CA C sing N N 254 LYS CA CB sing N N 255 LYS CA HA sing N N 256 LYS C O doub N N 257 LYS C OXT sing N N 258 LYS CB CG sing N N 259 LYS CB HB2 sing N N 260 LYS CB HB3 sing N N 261 LYS CG CD sing N N 262 LYS CG HG2 sing N N 263 LYS CG HG3 sing N N 264 LYS CD CE sing N N 265 LYS CD HD2 sing N N 266 LYS CD HD3 sing N N 267 LYS CE NZ sing N N 268 LYS CE HE2 sing N N 269 LYS CE HE3 sing N N 270 LYS NZ HZ1 sing N N 271 LYS NZ HZ2 sing N N 272 LYS NZ HZ3 sing N N 273 LYS OXT HXT sing N N 274 MET N CA sing N N 275 MET N H sing N N 276 MET N H2 sing N N 277 MET CA C sing N N 278 MET CA CB sing N N 279 MET CA HA sing N N 280 MET C O doub N N 281 MET C OXT sing N N 282 MET CB CG sing N N 283 MET CB HB2 sing N N 284 MET CB HB3 sing N N 285 MET CG SD sing N N 286 MET CG HG2 sing N N 287 MET CG HG3 sing N N 288 MET SD CE sing N N 289 MET CE HE1 sing N N 290 MET CE HE2 sing N N 291 MET CE HE3 sing N N 292 MET OXT HXT sing N N 293 PGE C1 O1 sing N N 294 PGE C1 C2 sing N N 295 PGE C1 H1 sing N N 296 PGE C1 H12 sing N N 297 PGE O1 HO1 sing N N 298 PGE C2 O2 sing N N 299 PGE C2 H2 sing N N 300 PGE C2 H22 sing N N 301 PGE O2 C3 sing N N 302 PGE C3 C4 sing N N 303 PGE C3 H3 sing N N 304 PGE C3 H32 sing N N 305 PGE C4 O3 sing N N 306 PGE C4 H4 sing N N 307 PGE C4 H42 sing N N 308 PGE O4 C6 sing N N 309 PGE O4 HO4 sing N N 310 PGE C6 C5 sing N N 311 PGE C6 H6 sing N N 312 PGE C6 H62 sing N N 313 PGE C5 O3 sing N N 314 PGE C5 H5 sing N N 315 PGE C5 H52 sing N N 316 PHE N CA sing N N 317 PHE N H sing N N 318 PHE N H2 sing N N 319 PHE CA C sing N N 320 PHE CA CB sing N N 321 PHE CA HA sing N N 322 PHE C O doub N N 323 PHE C OXT sing N N 324 PHE CB CG sing N N 325 PHE CB HB2 sing N N 326 PHE CB HB3 sing N N 327 PHE CG CD1 doub Y N 328 PHE CG CD2 sing Y N 329 PHE CD1 CE1 sing Y N 330 PHE CD1 HD1 sing N N 331 PHE CD2 CE2 doub Y N 332 PHE CD2 HD2 sing N N 333 PHE CE1 CZ doub Y N 334 PHE CE1 HE1 sing N N 335 PHE CE2 CZ sing Y N 336 PHE CE2 HE2 sing N N 337 PHE CZ HZ sing N N 338 PHE OXT HXT sing N N 339 PRO N CA sing N N 340 PRO N CD sing N N 341 PRO N H sing N N 342 PRO CA C sing N N 343 PRO CA CB sing N N 344 PRO CA HA sing N N 345 PRO C O doub N N 346 PRO C OXT sing N N 347 PRO CB CG sing N N 348 PRO CB HB2 sing N N 349 PRO CB HB3 sing N N 350 PRO CG CD sing N N 351 PRO CG HG2 sing N N 352 PRO CG HG3 sing N N 353 PRO CD HD2 sing N N 354 PRO CD HD3 sing N N 355 PRO OXT HXT sing N N 356 SER N CA sing N N 357 SER N H sing N N 358 SER N H2 sing N N 359 SER CA C sing N N 360 SER CA CB sing N N 361 SER CA HA sing N N 362 SER C O doub N N 363 SER C OXT sing N N 364 SER CB OG sing N N 365 SER CB HB2 sing N N 366 SER CB HB3 sing N N 367 SER OG HG sing N N 368 SER OXT HXT sing N N 369 THR N CA sing N N 370 THR N H sing N N 371 THR N H2 sing N N 372 THR CA C sing N N 373 THR CA CB sing N N 374 THR CA HA sing N N 375 THR C O doub N N 376 THR C OXT sing N N 377 THR CB OG1 sing N N 378 THR CB CG2 sing N N 379 THR CB HB sing N N 380 THR OG1 HG1 sing N N 381 THR CG2 HG21 sing N N 382 THR CG2 HG22 sing N N 383 THR CG2 HG23 sing N N 384 THR OXT HXT sing N N 385 TRP N CA sing N N 386 TRP N H sing N N 387 TRP N H2 sing N N 388 TRP CA C sing N N 389 TRP CA CB sing N N 390 TRP CA HA sing N N 391 TRP C O doub N N 392 TRP C OXT sing N N 393 TRP CB CG sing N N 394 TRP CB HB2 sing N N 395 TRP CB HB3 sing N N 396 TRP CG CD1 doub Y N 397 TRP CG CD2 sing Y N 398 TRP CD1 NE1 sing Y N 399 TRP CD1 HD1 sing N N 400 TRP CD2 CE2 doub Y N 401 TRP CD2 CE3 sing Y N 402 TRP NE1 CE2 sing Y N 403 TRP NE1 HE1 sing N N 404 TRP CE2 CZ2 sing Y N 405 TRP CE3 CZ3 doub Y N 406 TRP CE3 HE3 sing N N 407 TRP CZ2 CH2 doub Y N 408 TRP CZ2 HZ2 sing N N 409 TRP CZ3 CH2 sing Y N 410 TRP CZ3 HZ3 sing N N 411 TRP CH2 HH2 sing N N 412 TRP OXT HXT sing N N 413 TYR N CA sing N N 414 TYR N H sing N N 415 TYR N H2 sing N N 416 TYR CA C sing N N 417 TYR CA CB sing N N 418 TYR CA HA sing N N 419 TYR C O doub N N 420 TYR C OXT sing N N 421 TYR CB CG sing N N 422 TYR CB HB2 sing N N 423 TYR CB HB3 sing N N 424 TYR CG CD1 doub Y N 425 TYR CG CD2 sing Y N 426 TYR CD1 CE1 sing Y N 427 TYR CD1 HD1 sing N N 428 TYR CD2 CE2 doub Y N 429 TYR CD2 HD2 sing N N 430 TYR CE1 CZ doub Y N 431 TYR CE1 HE1 sing N N 432 TYR CE2 CZ sing Y N 433 TYR CE2 HE2 sing N N 434 TYR CZ OH sing N N 435 TYR OH HH sing N N 436 TYR OXT HXT sing N N 437 VAL N CA sing N N 438 VAL N H sing N N 439 VAL N H2 sing N N 440 VAL CA C sing N N 441 VAL CA CB sing N N 442 VAL CA HA sing N N 443 VAL C O doub N N 444 VAL C OXT sing N N 445 VAL CB CG1 sing N N 446 VAL CB CG2 sing N N 447 VAL CB HB sing N N 448 VAL CG1 HG11 sing N N 449 VAL CG1 HG12 sing N N 450 VAL CG1 HG13 sing N N 451 VAL CG2 HG21 sing N N 452 VAL CG2 HG22 sing N N 453 VAL CG2 HG23 sing N N 454 VAL OXT HXT sing N N 455 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "3'-deoxy-3'-(D-tyrosylamino)adenosine" D3Y 3 'TRIETHYLENE GLYCOL' PGE 4 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3KNF _pdbx_initial_refinement_model.details ? #