HEADER TRANSLATION 23-OCT-13 4NBS TITLE THE STRUCTURE OF AIF2GAMMA SUBUNIT H20F FROM ARCHAEON SULFOLOBUS TITLE 2 SOLFATARICUS COMPLEXED WITH GDPCP COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLATION INITIATION FACTOR 2 SUBUNIT GAMMA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: AIF2-GAMMA, EIF-2-GAMMA; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 2287; SOURCE 4 GENE: EIF2G, SSO0412; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: C41(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET11D KEYWDS TRANSLATION INITIATION, RNA-BINDING, GTP-BINDING, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR O.V.KRAVCHENKO,O.S.NIKONOV,V.I.ARHIPOVA,E.A.STOLBOUSHKINA, AUTHOR 2 A.G.GABDULKHAKOV,A.D.NIKULIN,M.B.GARBER,S.V.NIKONOV REVDAT 3 06-NOV-24 4NBS 1 REMARK REVDAT 2 20-SEP-23 4NBS 1 REMARK SEQADV LINK REVDAT 1 29-OCT-14 4NBS 0 JRNL AUTH O.V.KRAVCHENKO,O.S.NIKONOV,V.I.ARHIPOVA,E.A.STOLBOUSHKINA, JRNL AUTH 2 A.G.GABDULKHAKOV,A.D.NIKULIN,M.B.GARBER,S.V.NIKONOV JRNL TITL THE STRUCTURE OF AIF2GAMMA SUBUNIT H20F FROM ARCHAEON JRNL TITL 2 SULFOLOBUS SOLFATARICUS COMPLEXED WITH GDPCP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.31 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: DEV_1389) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.31 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 48034 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.179 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.201 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.060 REMARK 3 FREE R VALUE TEST SET COUNT : 2429 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.7976 - 5.9223 1.00 2805 151 0.1670 0.1924 REMARK 3 2 5.9223 - 4.7021 1.00 2704 149 0.1512 0.1538 REMARK 3 3 4.7021 - 4.1082 1.00 2735 130 0.1325 0.1450 REMARK 3 4 4.1082 - 3.7327 1.00 2659 152 0.1474 0.1813 REMARK 3 5 3.7327 - 3.4653 1.00 2682 158 0.1668 0.1931 REMARK 3 6 3.4653 - 3.2610 1.00 2664 154 0.1800 0.1890 REMARK 3 7 3.2610 - 3.0977 1.00 2704 131 0.1961 0.2199 REMARK 3 8 3.0977 - 2.9629 1.00 2676 133 0.1979 0.2354 REMARK 3 9 2.9629 - 2.8489 1.00 2673 129 0.2118 0.2403 REMARK 3 10 2.8489 - 2.7506 1.00 2665 146 0.2222 0.2586 REMARK 3 11 2.7506 - 2.6646 1.00 2656 140 0.2178 0.2532 REMARK 3 12 2.6646 - 2.5884 1.00 2693 135 0.2209 0.2353 REMARK 3 13 2.5884 - 2.5203 1.00 2695 120 0.2178 0.2326 REMARK 3 14 2.5203 - 2.4588 1.00 2614 156 0.2207 0.2712 REMARK 3 15 2.4588 - 2.4029 1.00 2692 142 0.2368 0.2898 REMARK 3 16 2.4029 - 2.3518 1.00 2641 148 0.2388 0.2891 REMARK 3 17 2.3518 - 2.3047 1.00 2647 155 0.2472 0.2736 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.060 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3348 REMARK 3 ANGLE : 1.009 4515 REMARK 3 CHIRALITY : 0.066 523 REMARK 3 PLANARITY : 0.004 564 REMARK 3 DIHEDRAL : 14.032 1256 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NBS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083003. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : SI-III CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS, SADABS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 48037 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 46.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.36 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.85 REMARK 200 R MERGE FOR SHELL (I) : 0.57640 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.410 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3SJY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 79.35 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 5.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 4M SODIUM FORMIATE, 0.1M SODIUM REMARK 280 CACODYLATE, 1% MMEPEG 5K, PH 6.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 301K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 Z,X,Y REMARK 290 6555 Z,-X,-Y REMARK 290 7555 -Z,-X,Y REMARK 290 8555 -Z,X,-Y REMARK 290 9555 Y,Z,X REMARK 290 10555 -Y,Z,-X REMARK 290 11555 Y,-Z,-X REMARK 290 12555 -Y,-Z,X REMARK 290 13555 X+1/2,Y+1/2,Z+1/2 REMARK 290 14555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 15555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 16555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 17555 Z+1/2,X+1/2,Y+1/2 REMARK 290 18555 Z+1/2,-X+1/2,-Y+1/2 REMARK 290 19555 -Z+1/2,-X+1/2,Y+1/2 REMARK 290 20555 -Z+1/2,X+1/2,-Y+1/2 REMARK 290 21555 Y+1/2,Z+1/2,X+1/2 REMARK 290 22555 -Y+1/2,Z+1/2,-X+1/2 REMARK 290 23555 Y+1/2,-Z+1/2,-X+1/2 REMARK 290 24555 -Y+1/2,-Z+1/2,X+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY2 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 7 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY2 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY1 9 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 9 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 9 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 10 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 10 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY3 10 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 12 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 12 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY3 12 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY1 14 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY1 15 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY2 15 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY1 16 1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY2 16 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY1 17 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY2 17 1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY3 17 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY1 18 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY2 18 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY3 18 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY1 19 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY2 19 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY3 19 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY1 20 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY2 20 1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY3 20 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY1 21 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY2 21 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY3 21 1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY1 22 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY2 22 0.000000 0.000000 1.000000 93.57600 REMARK 290 SMTRY3 22 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY1 23 0.000000 1.000000 0.000000 93.57600 REMARK 290 SMTRY2 23 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY3 23 -1.000000 0.000000 0.000000 93.57600 REMARK 290 SMTRY1 24 0.000000 -1.000000 0.000000 93.57600 REMARK 290 SMTRY2 24 0.000000 0.000000 -1.000000 93.57600 REMARK 290 SMTRY3 24 1.000000 0.000000 0.000000 93.57600 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 221 -163.28 -169.80 REMARK 500 VAL A 223 52.60 -95.05 REMARK 500 GLN A 264 -128.73 56.50 REMARK 500 LYS A 354 -8.44 76.91 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 502 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 23 OG1 REMARK 620 2 THR A 46 OG1 88.4 REMARK 620 3 GCP A 501 O3G 175.7 92.1 REMARK 620 4 GCP A 501 O2B 88.8 176.0 91.0 REMARK 620 5 HOH A 601 O 87.5 87.5 88.3 95.1 REMARK 620 6 HOH A 797 O 86.8 92.0 97.5 85.1 174.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 519 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 54 OG1 REMARK 620 2 THR A 70 O 89.9 REMARK 620 3 HOH A 641 O 84.7 78.3 REMARK 620 4 HOH A 653 O 97.2 149.0 72.3 REMARK 620 5 HOH A 712 O 96.3 100.6 178.5 108.6 REMARK 620 6 HOH A 848 O 154.7 77.6 71.4 83.7 107.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 518 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 328 OD1 REMARK 620 2 HOH A 605 O 80.5 REMARK 620 3 HOH A 616 O 114.0 87.4 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GCP A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 510 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 511 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 512 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 513 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 514 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 515 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 516 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 517 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 518 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 519 DBREF 4NBS A 1 415 UNP Q980A5 IF2G_SULSO 1 415 SEQADV 4NBS PHE A 20 UNP Q980A5 HIS 20 ENGINEERED MUTATION SEQRES 1 A 415 MET ALA TRP PRO LYS VAL GLN PRO GLU VAL ASN ILE GLY SEQRES 2 A 415 VAL VAL GLY HIS VAL ASP PHE GLY LYS THR THR LEU VAL SEQRES 3 A 415 GLN ALA ILE THR GLY ILE TRP THR SER LYS HIS SER GLU SEQRES 4 A 415 GLU LEU LYS ARG GLY MET THR ILE LYS LEU GLY TYR ALA SEQRES 5 A 415 GLU THR ASN ILE GLY VAL CYS GLU SER CYS LYS LYS PRO SEQRES 6 A 415 GLU ALA TYR VAL THR GLU PRO SER CYS LYS SER CYS GLY SEQRES 7 A 415 SER ASP ASP GLU PRO LYS PHE LEU ARG ARG ILE SER PHE SEQRES 8 A 415 ILE ASP ALA PRO GLY HIS GLU VAL LEU MET ALA THR MET SEQRES 9 A 415 LEU SER GLY ALA ALA LEU MET ASP GLY ALA ILE LEU VAL SEQRES 10 A 415 VAL ALA ALA ASN GLU PRO PHE PRO GLN PRO GLN THR ARG SEQRES 11 A 415 GLU HIS PHE VAL ALA LEU GLY ILE ILE GLY VAL LYS ASN SEQRES 12 A 415 LEU ILE ILE VAL GLN ASN LYS VAL ASP VAL VAL SER LYS SEQRES 13 A 415 GLU GLU ALA LEU SER GLN TYR ARG GLN ILE LYS GLN PHE SEQRES 14 A 415 THR LYS GLY THR TRP ALA GLU ASN VAL PRO ILE ILE PRO SEQRES 15 A 415 VAL SER ALA LEU HIS LYS ILE ASN ILE ASP SER LEU ILE SEQRES 16 A 415 GLU GLY ILE GLU GLU TYR ILE LYS THR PRO TYR ARG ASP SEQRES 17 A 415 LEU SER GLN LYS PRO VAL MET LEU VAL ILE ARG SER PHE SEQRES 18 A 415 ASP VAL ASN LYS PRO GLY THR GLN PHE ASN GLU LEU LYS SEQRES 19 A 415 GLY GLY VAL ILE GLY GLY SER ILE ILE GLN GLY LEU PHE SEQRES 20 A 415 LYS VAL ASP GLN GLU ILE LYS VAL LEU PRO GLY LEU ARG SEQRES 21 A 415 VAL GLU LYS GLN GLY LYS VAL SER TYR GLU PRO ILE PHE SEQRES 22 A 415 THR LYS ILE SER SER ILE ARG PHE GLY ASP GLU GLU PHE SEQRES 23 A 415 LYS GLU ALA LYS PRO GLY GLY LEU VAL ALA ILE GLY THR SEQRES 24 A 415 TYR LEU ASP PRO SER LEU THR LYS ALA ASP ASN LEU LEU SEQRES 25 A 415 GLY SER ILE ILE THR LEU ALA ASP ALA GLU VAL PRO VAL SEQRES 26 A 415 LEU TRP ASN ILE ARG ILE LYS TYR ASN LEU LEU GLU ARG SEQRES 27 A 415 VAL VAL GLY ALA LYS GLU MET LEU LYS VAL ASP PRO ILE SEQRES 28 A 415 ARG ALA LYS GLU THR LEU MET LEU SER VAL GLY SER SER SEQRES 29 A 415 THR THR LEU GLY ILE VAL THR SER VAL LYS LYS ASP GLU SEQRES 30 A 415 ILE GLU VAL GLU LEU ARG ARG PRO VAL ALA VAL TRP SER SEQRES 31 A 415 ASN ASN ILE ARG THR VAL ILE SER ARG GLN ILE ALA GLY SEQRES 32 A 415 ARG TRP ARG MET ILE GLY TRP GLY LEU VAL GLU ILE HET GCP A 501 32 HET MG A 502 1 HET FMT A 503 3 HET FMT A 504 3 HET FMT A 505 3 HET FMT A 506 3 HET FMT A 507 3 HET FMT A 508 3 HET FMT A 509 3 HET FMT A 510 3 HET FMT A 511 3 HET FMT A 512 3 HET FMT A 513 3 HET FMT A 514 3 HET FMT A 515 3 HET FMT A 516 3 HET FMT A 517 3 HET NA A 518 1 HET NA A 519 1 HETNAM GCP PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER HETNAM MG MAGNESIUM ION HETNAM FMT FORMIC ACID HETNAM NA SODIUM ION FORMUL 2 GCP C11 H18 N5 O13 P3 FORMUL 3 MG MG 2+ FORMUL 4 FMT 15(C H2 O2) FORMUL 19 NA 2(NA 1+) FORMUL 21 HOH *294(H2 O) HELIX 1 1 GLY A 21 GLY A 31 1 11 HELIX 2 2 HIS A 37 GLY A 44 1 8 HELIX 3 3 CYS A 74 GLY A 78 5 5 HELIX 4 4 HIS A 97 VAL A 99 5 3 HELIX 5 5 LEU A 100 ALA A 109 1 10 HELIX 6 6 GLN A 126 GLY A 140 1 15 HELIX 7 7 LYS A 150 VAL A 154 5 5 HELIX 8 8 SER A 155 LYS A 171 1 17 HELIX 9 9 ASN A 190 ILE A 202 1 13 HELIX 10 10 ASP A 302 LYS A 307 1 6 HELIX 11 11 ALA A 308 ASN A 310 5 3 SHEET 1 A 7 TYR A 68 VAL A 69 0 SHEET 2 A 7 GLY A 50 VAL A 58 -1 N GLY A 57 O VAL A 69 SHEET 3 A 7 LYS A 84 ASP A 93 -1 O PHE A 91 N ALA A 52 SHEET 4 A 7 ASN A 11 VAL A 15 1 N ILE A 12 O SER A 90 SHEET 5 A 7 GLY A 113 ALA A 119 1 O ILE A 115 N GLY A 13 SHEET 6 A 7 LEU A 144 ASN A 149 1 O VAL A 147 N VAL A 118 SHEET 7 A 7 ILE A 180 PRO A 182 1 O ILE A 181 N ILE A 146 SHEET 1 B 8 GLU A 284 PHE A 286 0 SHEET 2 B 8 LYS A 266 PHE A 281 -1 N PHE A 281 O GLU A 284 SHEET 3 B 8 VAL A 295 THR A 299 -1 O ALA A 296 N ARG A 280 SHEET 4 B 8 VAL A 237 GLN A 244 -1 N GLY A 240 O VAL A 295 SHEET 5 B 8 VAL A 214 PHE A 221 -1 N PHE A 221 O VAL A 237 SHEET 6 B 8 ILE A 315 LEU A 318 -1 O ILE A 316 N MET A 215 SHEET 7 B 8 GLU A 252 LYS A 263 -1 N LEU A 256 O ILE A 315 SHEET 8 B 8 LYS A 266 PHE A 281 -1 O SER A 268 N VAL A 261 SHEET 1 C 2 PHE A 247 LYS A 248 0 SHEET 2 C 2 GLU A 288 ALA A 289 -1 O ALA A 289 N PHE A 247 SHEET 1 D 7 VAL A 325 LEU A 335 0 SHEET 2 D 7 GLU A 377 ALA A 387 -1 O LEU A 382 N TRP A 327 SHEET 3 D 7 SER A 364 VAL A 373 -1 N ILE A 369 O GLU A 381 SHEET 4 D 7 THR A 356 VAL A 361 -1 N LEU A 357 O GLY A 368 SHEET 5 D 7 ARG A 394 ILE A 401 -1 O SER A 398 N MET A 358 SHEET 6 D 7 ARG A 404 GLU A 414 -1 O GLY A 411 N THR A 395 SHEET 7 D 7 VAL A 325 LEU A 335 -1 N ARG A 330 O GLU A 414 SSBOND 1 CYS A 59 CYS A 74 1555 1555 2.05 SSBOND 2 CYS A 62 CYS A 77 1555 1555 2.04 LINK OG1 THR A 23 MG MG A 502 1555 1555 2.21 LINK OG1 THR A 46 MG MG A 502 1555 1555 2.03 LINK OG1 THR A 54 NA NA A 519 1555 1555 2.50 LINK O THR A 70 NA NA A 519 1555 1555 2.92 LINK OD1 ASN A 328 NA NA A 518 1555 1555 2.29 LINK O3G GCP A 501 MG MG A 502 1555 1555 2.08 LINK O2B GCP A 501 MG MG A 502 1555 1555 2.10 LINK MG MG A 502 O HOH A 601 1555 1555 2.12 LINK MG MG A 502 O HOH A 797 1555 1555 2.15 LINK NA NA A 518 O HOH A 605 1555 1555 2.43 LINK NA NA A 518 O HOH A 616 1555 1555 2.36 LINK NA NA A 519 O HOH A 641 1555 1555 2.82 LINK NA NA A 519 O HOH A 653 1555 1555 2.67 LINK NA NA A 519 O HOH A 712 1555 1555 2.51 LINK NA NA A 519 O HOH A 848 1555 1555 2.45 CISPEP 1 LYS A 64 PRO A 65 0 5.14 CISPEP 2 PHE A 124 PRO A 125 0 2.03 CISPEP 3 LEU A 256 PRO A 257 0 -1.79 SITE 1 AC1 28 VAL A 18 ASP A 19 PHE A 20 GLY A 21 SITE 2 AC1 28 LYS A 22 THR A 23 THR A 24 MET A 45 SITE 3 AC1 28 THR A 46 GLY A 96 ASN A 149 LYS A 150 SITE 4 AC1 28 ASP A 152 VAL A 153 SER A 184 ALA A 185 SITE 5 AC1 28 LEU A 186 MG A 502 HOH A 601 HOH A 608 SITE 6 AC1 28 HOH A 625 HOH A 629 HOH A 630 HOH A 724 SITE 7 AC1 28 HOH A 779 HOH A 789 HOH A 797 HOH A 864 SITE 1 AC2 5 THR A 23 THR A 46 GCP A 501 HOH A 601 SITE 2 AC2 5 HOH A 797 SITE 1 AC3 4 LYS A 212 GLN A 244 TRP A 389 SER A 390 SITE 1 AC4 1 PHE A 221 SITE 1 AC5 3 ARG A 219 ALA A 296 HOH A 709 SITE 1 AC6 5 LEU A 312 SER A 364 THR A 365 HOH A 640 SITE 2 AC6 5 HOH A 660 SITE 1 AC7 4 THR A 366 LEU A 367 ARG A 383 ARG A 384 SITE 1 AC8 4 ARG A 43 VAL A 99 HOH A 691 HOH A 713 SITE 1 AC9 3 VAL A 223 ARG A 280 HOH A 674 SITE 1 BC1 2 HOH A 857 HOH A 893 SITE 1 BC2 2 ARG A 352 LYS A 354 SITE 1 BC3 4 LYS A 347 VAL A 348 ASP A 349 ARG A 399 SITE 1 BC4 3 ARG A 130 FMT A 515 HOH A 787 SITE 1 BC5 7 TRP A 33 SER A 35 GLU A 40 GLY A 44 SITE 2 BC5 7 MET A 45 THR A 46 HOH A 797 SITE 1 BC6 5 ARG A 130 ASP A 250 LYS A 275 FMT A 513 SITE 2 BC6 5 HOH A 842 SITE 1 BC7 3 GLU A 252 GLU A 344 MET A 345 SITE 1 BC8 3 THR A 103 HOH A 857 HOH A 885 SITE 1 BC9 6 VAL A 151 VAL A 154 TRP A 327 ASN A 328 SITE 2 BC9 6 HOH A 605 HOH A 616 SITE 1 CC1 6 THR A 54 THR A 70 HOH A 641 HOH A 653 SITE 2 CC1 6 HOH A 712 HOH A 848 CRYST1 187.152 187.152 187.152 90.00 90.00 90.00 I 2 3 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005343 0.000000 0.000000 0.00000 SCALE2 0.000000 0.005343 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005343 0.00000