HEADER UNKNOWN FUNCTION 24-OCT-13 4NCP TITLE CRYSTAL STRUCTURE OF 4-HBT LIKE THIOESTERASE SAV1878 FROM TITLE 2 STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50 CAVEAT 4NCP RESIDUE HIS E30 HAS POOR BOND GEOMETRY. COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 158878; SOURCE 4 STRAIN: MU50; SOURCE 5 GENE: SAV1878; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG21 KEYWDS THIOESTERASE, HOTDOG FOLD, HYDROLYSIS OF THIOESTER BOND, UNKNOWN KEYWDS 2 FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR Y.B.KHANDOKAR,J.K.FORWOOD REVDAT 3 20-SEP-23 4NCP 1 REMARK SEQADV REVDAT 2 15-NOV-17 4NCP 1 REMARK REVDAT 1 05-NOV-14 4NCP 0 JRNL AUTH Y.B.KHANDOKAR,J.K.FORWOOD JRNL TITL EXPRESSION, PURIFICATION, CRYSTALLIZATION, AND X-RAY JRNL TITL 2 DIFFRACTION ANALYSIS OF HYPOTHETICAL PROTEIN SAV1878 FROM JRNL TITL 3 STAPHYLOCOCCUS AUREUS SUBSP. AUREUS MU50 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 97.0 REMARK 3 NUMBER OF REFLECTIONS : 32726 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.207 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1725 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.56 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2405 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.26 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 114 REMARK 3 BIN FREE R VALUE : 0.3130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7704 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 164 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.29000 REMARK 3 B22 (A**2) : -0.29000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.175 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.308 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.213 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.563 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.922 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7762 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 7380 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10488 ; 1.474 ; 1.951 REMARK 3 BOND ANGLES OTHERS (DEGREES): 17008 ; 0.765 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 964 ; 6.038 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 352 ;38.011 ;24.602 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1372 ;14.862 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;13.896 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1174 ; 0.075 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8734 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1712 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4NCP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JAN-14. REMARK 100 THE DEPOSITION ID IS D_1000083036. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-APR-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537 REMARK 200 MONOCHROMATOR : SILICON DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35295 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.500 REMARK 200 RESOLUTION RANGE LOW (A) : 35.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.56 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: 1VPM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.15 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200MM SODIUM MALONATE PH5.5, 18% REMARK 280 PEG3350, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 296K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 64.25000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 18780 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 37110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -120.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15150 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3510 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15060 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 ASN A 3 REMARK 465 GLN A 4 REMARK 465 ASP A 5 REMARK 465 ARG A 6 REMARK 465 ALA A 169 REMARK 465 GLN A 170 REMARK 465 ALA A 171 REMARK 465 GLN A 172 REMARK 465 HIS A 173 REMARK 465 ILE A 174 REMARK 465 ARG A 175 REMARK 465 ASP A 176 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 ASN B 3 REMARK 465 GLN B 4 REMARK 465 ASP B 5 REMARK 465 ARG B 6 REMARK 465 ALA B 169 REMARK 465 GLN B 170 REMARK 465 ALA B 171 REMARK 465 GLN B 172 REMARK 465 HIS B 173 REMARK 465 ILE B 174 REMARK 465 ARG B 175 REMARK 465 ASP B 176 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 ASN C 3 REMARK 465 GLN C 4 REMARK 465 ASP C 5 REMARK 465 ARG C 6 REMARK 465 ALA C 169 REMARK 465 GLN C 170 REMARK 465 ALA C 171 REMARK 465 GLN C 172 REMARK 465 HIS C 173 REMARK 465 ILE C 174 REMARK 465 ARG C 175 REMARK 465 ASP C 176 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 ALA D 0 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 ASN D 3 REMARK 465 GLN D 4 REMARK 465 ASP D 5 REMARK 465 ARG D 6 REMARK 465 ALA D 169 REMARK 465 GLN D 170 REMARK 465 ALA D 171 REMARK 465 GLN D 172 REMARK 465 HIS D 173 REMARK 465 ILE D 174 REMARK 465 ARG D 175 REMARK 465 ASP D 176 REMARK 465 SER E -2 REMARK 465 ASN E -1 REMARK 465 ALA E 0 REMARK 465 MET E 1 REMARK 465 THR E 2 REMARK 465 ASN E 3 REMARK 465 GLN E 4 REMARK 465 ASP E 5 REMARK 465 ARG E 6 REMARK 465 ALA E 169 REMARK 465 GLN E 170 REMARK 465 ALA E 171 REMARK 465 GLN E 172 REMARK 465 HIS E 173 REMARK 465 ILE E 174 REMARK 465 ARG E 175 REMARK 465 ASP E 176 REMARK 465 SER F -2 REMARK 465 ASN F -1 REMARK 465 ALA F 0 REMARK 465 MET F 1 REMARK 465 THR F 2 REMARK 465 ASN F 3 REMARK 465 GLN F 4 REMARK 465 ASP F 5 REMARK 465 ARG F 6 REMARK 465 ALA F 169 REMARK 465 GLN F 170 REMARK 465 ALA F 171 REMARK 465 GLN F 172 REMARK 465 HIS F 173 REMARK 465 ILE F 174 REMARK 465 ARG F 175 REMARK 465 ASP F 176 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 HIS A 29 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS A 30 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS A 31 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS B 29 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS B 31 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS C 29 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS C 30 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS C 31 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS D 29 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS D 30 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS E 29 C CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS E 30 C CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS E 31 CB CG ND1 CD2 CE1 NE2 REMARK 480 HIS F 29 CB CG ND1 CD2 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 30 CA HIS A 30 CB -0.175 REMARK 500 HIS D 30 CA HIS D 30 CB -0.174 REMARK 500 HIS E 30 CA HIS E 30 CB -0.425 REMARK 500 HIS E 30 CA HIS E 30 C 0.415 REMARK 500 HIS E 30 C HIS E 30 O 0.599 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS E 29 O - C - N ANGL. DEV. = -19.0 DEGREES REMARK 500 HIS E 30 C - N - CA ANGL. DEV. = 15.1 DEGREES REMARK 500 HIS E 30 N - CA - CB ANGL. DEV. = 12.0 DEGREES REMARK 500 HIS E 30 CA - CB - CG ANGL. DEV. = -12.3 DEGREES REMARK 500 HIS E 30 N - CA - C ANGL. DEV. = -17.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL DBREF 4NCP A 1 176 UNP Q931N3 Q931N3_STAAM 1 176 DBREF 4NCP B 1 176 UNP Q931N3 Q931N3_STAAM 1 176 DBREF 4NCP C 1 176 UNP Q931N3 Q931N3_STAAM 1 176 DBREF 4NCP D 1 176 UNP Q931N3 Q931N3_STAAM 1 176 DBREF 4NCP E 1 176 UNP Q931N3 Q931N3_STAAM 1 176 DBREF 4NCP F 1 176 UNP Q931N3 Q931N3_STAAM 1 176 SEQADV 4NCP SER A -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN A -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA A 0 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP SER B -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN B -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA B 0 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP SER C -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN C -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA C 0 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP SER D -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN D -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA D 0 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP SER E -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN E -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA E 0 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP SER F -2 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ASN F -1 UNP Q931N3 EXPRESSION TAG SEQADV 4NCP ALA F 0 UNP Q931N3 EXPRESSION TAG SEQRES 1 A 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 A 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 A 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 A 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 A 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 A 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 A 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 A 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 A 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 A 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 A 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 A 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 A 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 A 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP SEQRES 1 B 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 B 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 B 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 B 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 B 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 B 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 B 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 B 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 B 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 B 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 B 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 B 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 B 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 B 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP SEQRES 1 C 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 C 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 C 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 C 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 C 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 C 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 C 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 C 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 C 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 C 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 C 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 C 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 C 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 C 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP SEQRES 1 D 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 D 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 D 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 D 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 D 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 D 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 D 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 D 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 D 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 D 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 D 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 D 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 D 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 D 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP SEQRES 1 E 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 E 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 E 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 E 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 E 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 E 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 E 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 E 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 E 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 E 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 E 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 E 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 E 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 E 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP SEQRES 1 F 179 SER ASN ALA MET THR ASN GLN ASP ARG PRO MET LYS SER SEQRES 2 F 179 MET SER GLU SER LYS CYS TYR LYS ASN ARG GLN VAL PHE SEQRES 3 F 179 PRO GLN ASP THR ASN HIS HIS HIS THR MET PHE GLY GLY SEQRES 4 F 179 THR LEU MET ALA ASN ILE ASP GLU ILE ALA ALA ILE THR SEQRES 5 F 179 ALA MET LYS HIS ALA GLY ALA GLN VAL VAL THR ALA SER SEQRES 6 F 179 THR ASP SER VAL ASP PHE LEU LYS PRO ILE LYS THR GLY SEQRES 7 F 179 ASP ILE LEU GLN TYR VAL ALA MET VAL SER TYR ALA GLY SEQRES 8 F 179 THR SER SER MET GLU VAL VAL VAL GLN ILE ARG ILE ASP SEQRES 9 F 179 ASP VAL PHE ASN ASN LYS HIS ASP LEU ALA ALA LEU SER SEQRES 10 F 179 TYR LEU THR PHE VAL ALA LEU ASP ASP GLU GLY LYS PRO SEQRES 11 F 179 LYS HIS VAL PRO GLY VAL TYR PRO GLU ASP ASP VAL GLU SEQRES 12 F 179 LYS TRP PHE TYR ASP THR ALA PRO GLN ARG VAL GLU ARG SEQRES 13 F 179 ARG LYS ALA ARG ARG ILE GLU SER LYS GLN THR ILE GLU SEQRES 14 F 179 TYR LEU ALA GLN ALA GLN HIS ILE ARG ASP FORMUL 7 HOH *164(H2 O) HELIX 1 1 PHE A 23 THR A 27 5 5 HELIX 2 2 PHE A 34 GLY A 55 1 22 HELIX 3 3 ASP A 137 LEU A 168 1 32 HELIX 4 4 SER B 12 LYS B 15 5 4 HELIX 5 5 PHE B 23 THR B 27 5 5 HELIX 6 6 PHE B 34 GLY B 55 1 22 HELIX 7 7 ASP B 137 LEU B 168 1 32 HELIX 8 8 PHE C 23 THR C 27 5 5 HELIX 9 9 PHE C 34 GLY C 55 1 22 HELIX 10 10 ASP C 137 LEU C 168 1 32 HELIX 11 11 PHE D 23 THR D 27 5 5 HELIX 12 12 PHE D 34 GLY D 55 1 22 HELIX 13 13 ASP D 137 LEU D 168 1 32 HELIX 14 14 PHE E 23 THR E 27 5 5 HELIX 15 15 PHE E 34 GLY E 55 1 22 HELIX 16 16 ASP E 137 LEU E 168 1 32 HELIX 17 17 PHE F 23 THR F 27 5 5 HELIX 18 18 PHE F 34 GLY F 55 1 22 HELIX 19 19 ASP F 137 LEU F 168 1 32 SHEET 1 A 2 MET A 8 SER A 10 0 SHEET 2 A 2 GLY A 132 TYR A 134 1 O GLY A 132 N LYS A 9 SHEET 1 B10 CYS A 16 GLN A 21 0 SHEET 2 B10 ILE A 77 ALA A 87 -1 O LEU A 78 N ARG A 20 SHEET 3 B10 SER A 91 ASP A 102 -1 O ASP A 101 N ILE A 77 SHEET 4 B10 LYS A 107 LEU A 121 -1 O SER A 114 N VAL A 96 SHEET 5 B10 GLN A 57 PHE A 68 -1 N ASP A 67 O LEU A 113 SHEET 6 B10 GLN C 57 PHE C 68 -1 O THR C 63 N VAL A 66 SHEET 7 B10 LYS C 107 LEU C 121 -1 O LEU C 113 N ASP C 67 SHEET 8 B10 SER C 91 ASP C 102 -1 N ILE C 98 O ALA C 112 SHEET 9 B10 ILE C 77 ALA C 87 -1 N ILE C 77 O ASP C 101 SHEET 10 B10 CYS C 16 GLN C 21 -1 N ARG C 20 O LEU C 78 SHEET 1 C 2 MET B 8 SER B 10 0 SHEET 2 C 2 GLY B 132 TYR B 134 1 O GLY B 132 N LYS B 9 SHEET 1 D10 CYS B 16 GLN B 21 0 SHEET 2 D10 ILE B 77 ALA B 87 -1 O LEU B 78 N ARG B 20 SHEET 3 D10 SER B 91 ASP B 102 -1 O ASP B 101 N ILE B 77 SHEET 4 D10 LYS B 107 LEU B 121 -1 O LEU B 116 N VAL B 94 SHEET 5 D10 GLN B 57 PHE B 68 -1 N ASP B 67 O LEU B 113 SHEET 6 D10 GLN E 57 PHE E 68 -1 O THR E 63 N VAL B 66 SHEET 7 D10 HIS E 108 LEU E 121 -1 O LEU E 113 N ASP E 67 SHEET 8 D10 SER E 91 ASP E 101 -1 N ILE E 100 O ASP E 109 SHEET 9 D10 ILE E 77 ALA E 87 -1 N ILE E 77 O ASP E 101 SHEET 10 D10 CYS E 16 GLN E 21 -1 N ARG E 20 O LEU E 78 SHEET 1 E 2 MET C 8 SER C 10 0 SHEET 2 E 2 GLY C 132 TYR C 134 1 O GLY C 132 N LYS C 9 SHEET 1 F 2 MET D 8 SER D 10 0 SHEET 2 F 2 GLY D 132 TYR D 134 1 O TYR D 134 N LYS D 9 SHEET 1 G10 CYS D 16 GLN D 21 0 SHEET 2 G10 ILE D 77 ALA D 87 -1 O LEU D 78 N ARG D 20 SHEET 3 G10 SER D 91 ASP D 102 -1 O ASP D 101 N ILE D 77 SHEET 4 G10 LYS D 107 LEU D 121 -1 O ASP D 109 N ILE D 100 SHEET 5 G10 GLN D 57 PHE D 68 -1 N ASP D 67 O LEU D 113 SHEET 6 G10 GLN F 57 PHE F 68 -1 O THR F 63 N VAL D 66 SHEET 7 G10 LYS F 107 LEU F 121 -1 O THR F 117 N ALA F 61 SHEET 8 G10 SER F 91 ASP F 102 -1 N ILE F 100 O ASP F 109 SHEET 9 G10 ILE F 77 ALA F 87 -1 N TYR F 86 O GLU F 93 SHEET 10 G10 CYS F 16 GLN F 21 -1 N ARG F 20 O LEU F 78 SHEET 1 H 2 MET E 8 SER E 10 0 SHEET 2 H 2 GLY E 132 TYR E 134 1 O GLY E 132 N LYS E 9 SHEET 1 I 2 MET F 8 SER F 10 0 SHEET 2 I 2 GLY F 132 TYR F 134 1 O GLY F 132 N LYS F 9 CRYST1 49.930 128.500 83.540 90.00 102.78 90.00 P 1 21 1 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020028 0.000000 0.004543 0.00000 SCALE2 0.000000 0.007782 0.000000 0.00000 SCALE3 0.000000 0.000000 0.012274 0.00000