data_4NDJ # _entry.id 4NDJ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.287 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NDJ RCSB RCSB083066 WWPDB D_1000083066 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4NDK _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4NDJ _pdbx_database_status.recvd_initial_deposition_date 2013-10-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Mou, Y.' 1 'Mayo, S.L.' 2 # _citation.id primary _citation.title 'Using Molecular Dynamics Simulations as an Aid in the Prediction of Domain Swapping of Computationally Designed Protein Variants.' _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 427 _citation.page_first 2697 _citation.page_last 2706 _citation.year 2015 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 26101839 _citation.pdbx_database_id_DOI 10.1016/j.jmb.2015.06.006 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Mou, Y.' 1 primary 'Huang, P.S.' 2 primary 'Thomas, L.M.' 3 primary 'Mayo, S.L.' 4 # _cell.entry_id 4NDJ _cell.length_a 104.420 _cell.length_b 104.420 _cell.length_c 80.190 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4NDJ _symmetry.space_group_name_H-M 'P 42 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 93 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Green fluorescent protein, chimeric construct,GFP-like fluorescent chromoprotein FP506, related' 34542.867 1 ? ? ? ? 2 water nat water 18.015 333 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;MTEFSEEQKKALDLAFYFDRRLTEEWRRYLSQRLGLNEEQIERWFRRKEQQIMVSKGEELFTGVVPILVELDGDVNGHKF SVSGEGEGDATYGKLTLKLICTTGKLPVPWPTLVTTL(CR2)LQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGN YKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGGVQLADHYQQN TPIGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGGHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MTEFSEEQKKALDLAFYFDRRLTEEWRRYLSQRLGLNEEQIERWFRRKEQQIMVSKGEELFTGVVPILVELDGDVNGHKF SVSGEGEGDATYGKLTLKLICTTGKLPVPWPTLVTTLGYGLQCFARYPDHMKQHDFFKSAMPEGYVQERTIFFKDDGNYK TRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYITADKQKNGIKANFKIRHNIEDGGVQLADHYQQNTP IGDGPVLLPDNHYLSYQSKLSKDPNEKRDHMVLLEFVTAAGITLGMDELYKGGHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 THR n 1 3 GLU n 1 4 PHE n 1 5 SER n 1 6 GLU n 1 7 GLU n 1 8 GLN n 1 9 LYS n 1 10 LYS n 1 11 ALA n 1 12 LEU n 1 13 ASP n 1 14 LEU n 1 15 ALA n 1 16 PHE n 1 17 TYR n 1 18 PHE n 1 19 ASP n 1 20 ARG n 1 21 ARG n 1 22 LEU n 1 23 THR n 1 24 GLU n 1 25 GLU n 1 26 TRP n 1 27 ARG n 1 28 ARG n 1 29 TYR n 1 30 LEU n 1 31 SER n 1 32 GLN n 1 33 ARG n 1 34 LEU n 1 35 GLY n 1 36 LEU n 1 37 ASN n 1 38 GLU n 1 39 GLU n 1 40 GLN n 1 41 ILE n 1 42 GLU n 1 43 ARG n 1 44 TRP n 1 45 PHE n 1 46 ARG n 1 47 ARG n 1 48 LYS n 1 49 GLU n 1 50 GLN n 1 51 GLN n 1 52 ILE n 1 53 MET n 1 54 VAL n 1 55 SER n 1 56 LYS n 1 57 GLY n 1 58 GLU n 1 59 GLU n 1 60 LEU n 1 61 PHE n 1 62 THR n 1 63 GLY n 1 64 VAL n 1 65 VAL n 1 66 PRO n 1 67 ILE n 1 68 LEU n 1 69 VAL n 1 70 GLU n 1 71 LEU n 1 72 ASP n 1 73 GLY n 1 74 ASP n 1 75 VAL n 1 76 ASN n 1 77 GLY n 1 78 HIS n 1 79 LYS n 1 80 PHE n 1 81 SER n 1 82 VAL n 1 83 SER n 1 84 GLY n 1 85 GLU n 1 86 GLY n 1 87 GLU n 1 88 GLY n 1 89 ASP n 1 90 ALA n 1 91 THR n 1 92 TYR n 1 93 GLY n 1 94 LYS n 1 95 LEU n 1 96 THR n 1 97 LEU n 1 98 LYS n 1 99 LEU n 1 100 ILE n 1 101 CYS n 1 102 THR n 1 103 THR n 1 104 GLY n 1 105 LYS n 1 106 LEU n 1 107 PRO n 1 108 VAL n 1 109 PRO n 1 110 TRP n 1 111 PRO n 1 112 THR n 1 113 LEU n 1 114 VAL n 1 115 THR n 1 116 THR n 1 117 LEU n 1 118 CR2 n 1 119 LEU n 1 120 GLN n 1 121 CYS n 1 122 PHE n 1 123 ALA n 1 124 ARG n 1 125 TYR n 1 126 PRO n 1 127 ASP n 1 128 HIS n 1 129 MET n 1 130 LYS n 1 131 GLN n 1 132 HIS n 1 133 ASP n 1 134 PHE n 1 135 PHE n 1 136 LYS n 1 137 SER n 1 138 ALA n 1 139 MET n 1 140 PRO n 1 141 GLU n 1 142 GLY n 1 143 TYR n 1 144 VAL n 1 145 GLN n 1 146 GLU n 1 147 ARG n 1 148 THR n 1 149 ILE n 1 150 PHE n 1 151 PHE n 1 152 LYS n 1 153 ASP n 1 154 ASP n 1 155 GLY n 1 156 ASN n 1 157 TYR n 1 158 LYS n 1 159 THR n 1 160 ARG n 1 161 ALA n 1 162 GLU n 1 163 VAL n 1 164 LYS n 1 165 PHE n 1 166 GLU n 1 167 GLY n 1 168 ASP n 1 169 THR n 1 170 LEU n 1 171 VAL n 1 172 ASN n 1 173 ARG n 1 174 ILE n 1 175 GLU n 1 176 LEU n 1 177 LYS n 1 178 GLY n 1 179 ILE n 1 180 ASP n 1 181 PHE n 1 182 LYS n 1 183 GLU n 1 184 ASP n 1 185 GLY n 1 186 ASN n 1 187 ILE n 1 188 LEU n 1 189 GLY n 1 190 HIS n 1 191 LYS n 1 192 LEU n 1 193 GLU n 1 194 TYR n 1 195 ASN n 1 196 TYR n 1 197 ASN n 1 198 SER n 1 199 HIS n 1 200 ASN n 1 201 VAL n 1 202 TYR n 1 203 ILE n 1 204 THR n 1 205 ALA n 1 206 ASP n 1 207 LYS n 1 208 GLN n 1 209 LYS n 1 210 ASN n 1 211 GLY n 1 212 ILE n 1 213 LYS n 1 214 ALA n 1 215 ASN n 1 216 PHE n 1 217 LYS n 1 218 ILE n 1 219 ARG n 1 220 HIS n 1 221 ASN n 1 222 ILE n 1 223 GLU n 1 224 ASP n 1 225 GLY n 1 226 GLY n 1 227 VAL n 1 228 GLN n 1 229 LEU n 1 230 ALA n 1 231 ASP n 1 232 HIS n 1 233 TYR n 1 234 GLN n 1 235 GLN n 1 236 ASN n 1 237 THR n 1 238 PRO n 1 239 ILE n 1 240 GLY n 1 241 ASP n 1 242 GLY n 1 243 PRO n 1 244 VAL n 1 245 LEU n 1 246 LEU n 1 247 PRO n 1 248 ASP n 1 249 ASN n 1 250 HIS n 1 251 TYR n 1 252 LEU n 1 253 SER n 1 254 TYR n 1 255 GLN n 1 256 SER n 1 257 LYS n 1 258 LEU n 1 259 SER n 1 260 LYS n 1 261 ASP n 1 262 PRO n 1 263 ASN n 1 264 GLU n 1 265 LYS n 1 266 ARG n 1 267 ASP n 1 268 HIS n 1 269 MET n 1 270 VAL n 1 271 LEU n 1 272 LEU n 1 273 GLU n 1 274 PHE n 1 275 VAL n 1 276 THR n 1 277 ALA n 1 278 ALA n 1 279 GLY n 1 280 ILE n 1 281 THR n 1 282 LEU n 1 283 GLY n 1 284 MET n 1 285 ASP n 1 286 GLU n 1 287 LEU n 1 288 TYR n 1 289 LYS n 1 290 GLY n 1 291 GLY n 1 292 HIS n 1 293 HIS n 1 294 HIS n 1 295 HIS n 1 296 HIS n 1 297 HIS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample 'Biological sequence' 1 52 Jellyfish ? GFP ? ? ? ? ? ? 'Aequorea victoria' 6100 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? 1 2 sample 'Biological sequence' 53 297 'Coccidian parasite' ? EAH_00062270 ? ? ? ? ? ? 'Eimeria acervulina' 5801 ? ? ? ? ? ? ? ? 'Escherichia coli' 562 ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 PDB 4NDJ 4NDJ ? 1 ? 1 2 UNP U6GSR1_EIMAC U6GSR1 ? 1 ;MVSKGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFGYGLMCFARYPDHMK QHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNYNSHNVYIMADKQKN GIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSYQSALSKDPNEKRDHMVLLEFVTAAGITLGMDELYK ; 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NDJ A 1 ? 52 ? 4NDJ 0 ? 51 ? 0 51 2 2 4NDJ A 53 ? 289 ? U6GSR1 1 ? 239 ? 52 288 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4NDJ MET A 1 ? PDB ? ? ? 'initiating methionine' 0 1 2 4NDJ LEU A 99 ? UNP U6GSR1 PHE 47 'SEE REMARK 999' 98 2 2 4NDJ LEU A 117 ? UNP U6GSR1 PHE 65 'SEE REMARK 999' 116 3 2 4NDJ CR2 A 118 ? UNP U6GSR1 GLY 66 chromophore 117 4 2 4NDJ CR2 A 118 ? UNP U6GSR1 TYR 67 chromophore 117 5 2 4NDJ CR2 A 118 ? UNP U6GSR1 GLY 68 chromophore 117 6 2 4NDJ GLN A 120 ? UNP U6GSR1 MET 70 'SEE REMARK 999' 119 7 2 4NDJ THR A 204 ? UNP U6GSR1 MET 154 'SEE REMARK 999' 203 8 2 4NDJ ALA A 214 ? UNP U6GSR1 VAL 164 'SEE REMARK 999' 213 9 2 4NDJ GLY A 226 ? UNP U6GSR1 SER 176 'SEE REMARK 999' 225 10 2 4NDJ LYS A 257 ? UNP U6GSR1 ALA 207 'SEE REMARK 999' 256 11 2 4NDJ GLY A 290 ? UNP U6GSR1 ? ? 'expression tag' 289 12 2 4NDJ GLY A 291 ? UNP U6GSR1 ? ? 'expression tag' 290 13 2 4NDJ HIS A 292 ? UNP U6GSR1 ? ? 'expression tag' 291 14 2 4NDJ HIS A 293 ? UNP U6GSR1 ? ? 'expression tag' 292 15 2 4NDJ HIS A 294 ? UNP U6GSR1 ? ? 'expression tag' 293 16 2 4NDJ HIS A 295 ? UNP U6GSR1 ? ? 'expression tag' 294 17 2 4NDJ HIS A 296 ? UNP U6GSR1 ? ? 'expression tag' 295 18 2 4NDJ HIS A 297 ? UNP U6GSR1 ? ? 'expression tag' 296 19 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CR2 'L-peptide linking' n '{(4Z)-2-(aminomethyl)-4-[(4-hydroxyphenyl)methylidene]-5-oxo-4,5-dihydro-1H-imidazol-1-yl}acetic acid' 'CHROMOPHORE (GLY-TYR-GLY)' 'C13 H13 N3 O4' 275.260 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4NDJ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.16 _exptl_crystal.density_percent_sol 61.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.5 _exptl_crystal_grow.pdbx_details ;0.8 M monosodium phosphate, 1.2 M dipotassium phosphate, 0.1 M sodium acetate, pH 4.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 150.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.pdbx_collection_date 2009-06-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.033200 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.033200 # _reflns.entry_id 4NDJ _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low ? _reflns.d_resolution_high 1.85 _reflns.number_obs 39983 _reflns.number_all ? _reflns.percent_possible_obs ? _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4NDJ _refine.ls_number_reflns_obs 38078 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.961 _refine.ls_d_res_high 1.850 _refine.ls_percent_reflns_obs 99.12 _refine.ls_R_factor_obs 0.1745 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1731 _refine.ls_R_factor_R_free 0.1999 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.97 _refine.ls_number_reflns_R_free 1891 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.16 _refine.pdbx_overall_phase_error 17.56 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2294 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 333 _refine_hist.number_atoms_total 2627 _refine_hist.d_res_high 1.850 _refine_hist.d_res_low 28.961 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.007 ? ? 2347 ? 'X-RAY DIFFRACTION' f_angle_d 1.191 ? ? 3167 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 16.561 ? ? 884 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.080 ? ? 331 ? 'X-RAY DIFFRACTION' f_plane_restr 0.005 ? ? 412 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.8500 1.8963 2577 0.1922 100.00 0.2296 . . 115 . . . . 'X-RAY DIFFRACTION' . 1.8963 1.9476 2542 0.1703 100.00 0.2029 . . 144 . . . . 'X-RAY DIFFRACTION' . 1.9476 2.0049 2570 0.1607 100.00 0.1822 . . 134 . . . . 'X-RAY DIFFRACTION' . 2.0049 2.0696 2558 0.1663 100.00 0.1949 . . 143 . . . . 'X-RAY DIFFRACTION' . 2.0696 2.1435 2587 0.1676 100.00 0.1847 . . 110 . . . . 'X-RAY DIFFRACTION' . 2.1435 2.2293 2602 0.1741 100.00 0.2158 . . 131 . . . . 'X-RAY DIFFRACTION' . 2.2293 2.3307 2547 0.1732 100.00 0.2091 . . 141 . . . . 'X-RAY DIFFRACTION' . 2.3307 2.4535 2600 0.1796 100.00 0.2403 . . 129 . . . . 'X-RAY DIFFRACTION' . 2.4535 2.6072 2578 0.1801 100.00 0.2029 . . 147 . . . . 'X-RAY DIFFRACTION' . 2.6072 2.8083 2609 0.1787 100.00 0.2134 . . 144 . . . . 'X-RAY DIFFRACTION' . 2.8083 3.0906 2603 0.1805 100.00 0.2181 . . 150 . . . . 'X-RAY DIFFRACTION' . 3.0906 3.5372 2635 0.1689 100.00 0.1750 . . 138 . . . . 'X-RAY DIFFRACTION' . 3.5372 4.4539 2641 0.1539 99.00 0.1845 . . 141 . . . . 'X-RAY DIFFRACTION' . 4.4539 28.9644 2538 0.1907 90.00 0.2040 . . 124 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4NDJ _struct.title 'Crystal Structure of a computational designed engrailed homeodomain variant fused with YFP' _struct.pdbx_descriptor E23-YFP _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NDJ _struct_keywords.pdbx_keywords 'fluorescent protein, de novo protein' _struct_keywords.text 'helix-turn-helix, fluorescent protein, de novo protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 5 ? GLY A 35 ? SER A 4 GLY A 34 1 ? 31 HELX_P HELX_P2 2 ASN A 37 ? PHE A 61 ? ASN A 36 PHE A 60 1 ? 25 HELX_P HELX_P3 3 ALA A 90 ? TYR A 92 ? ALA A 89 TYR A 91 5 ? 3 HELX_P HELX_P4 4 PRO A 109 ? VAL A 114 ? PRO A 108 VAL A 113 5 ? 6 HELX_P HELX_P5 5 LEU A 119 ? ALA A 123 ? LEU A 118 ALA A 122 5 ? 5 HELX_P HELX_P6 6 PRO A 126 ? HIS A 132 ? PRO A 125 HIS A 131 5 ? 7 HELX_P HELX_P7 7 ASP A 133 ? ALA A 138 ? ASP A 132 ALA A 137 1 ? 6 HELX_P HELX_P8 8 LYS A 207 ? ASN A 210 ? LYS A 206 ASN A 209 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A LEU 117 C ? ? ? 1_555 A CR2 118 N1 ? ? A LEU 116 A CR2 117 1_555 ? ? ? ? ? ? ? 1.427 ? covale2 covale ? ? A CR2 118 C3 ? ? ? 1_555 A LEU 119 N ? ? A CR2 117 A LEU 118 1_555 ? ? ? ? ? ? ? 1.422 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id MET _struct_mon_prot_cis.label_seq_id 139 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id MET _struct_mon_prot_cis.auth_seq_id 138 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 PRO _struct_mon_prot_cis.pdbx_label_seq_id_2 140 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 PRO _struct_mon_prot_cis.pdbx_auth_seq_id_2 139 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 2.82 # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 12 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel A 7 8 ? anti-parallel A 8 9 ? anti-parallel A 9 10 ? anti-parallel A 10 11 ? anti-parallel A 11 12 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 65 ? VAL A 75 ? VAL A 64 VAL A 74 A 2 HIS A 78 ? ASP A 89 ? HIS A 77 ASP A 88 A 3 LYS A 94 ? CYS A 101 ? LYS A 93 CYS A 100 A 4 HIS A 268 ? ALA A 278 ? HIS A 267 ALA A 277 A 5 HIS A 250 ? SER A 259 ? HIS A 249 SER A 258 A 6 HIS A 199 ? ASP A 206 ? HIS A 198 ASP A 205 A 7 GLY A 211 ? ASN A 221 ? GLY A 210 ASN A 220 A 8 VAL A 227 ? PRO A 238 ? VAL A 226 PRO A 237 A 9 TYR A 143 ? PHE A 151 ? TYR A 142 PHE A 150 A 10 ASN A 156 ? GLU A 166 ? ASN A 155 GLU A 165 A 11 THR A 169 ? ILE A 179 ? THR A 168 ILE A 178 A 12 VAL A 65 ? VAL A 75 ? VAL A 64 VAL A 74 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLY A 73 ? N GLY A 72 O PHE A 80 ? O PHE A 79 A 2 3 N ASP A 89 ? N ASP A 88 O LYS A 94 ? O LYS A 93 A 3 4 N LEU A 99 ? N LEU A 98 O MET A 269 ? O MET A 268 A 4 5 O THR A 276 ? O THR A 275 N SER A 253 ? N SER A 252 A 5 6 O TYR A 254 ? O TYR A 253 N HIS A 199 ? N HIS A 198 A 6 7 N ASP A 206 ? N ASP A 205 O GLY A 211 ? O GLY A 210 A 7 8 N HIS A 220 ? N HIS A 219 O GLN A 228 ? O GLN A 227 A 8 9 O THR A 237 ? O THR A 236 N VAL A 144 ? N VAL A 143 A 9 10 N ILE A 149 ? N ILE A 148 O TYR A 157 ? O TYR A 156 A 10 11 N LYS A 164 ? N LYS A 163 O VAL A 171 ? O VAL A 170 A 11 12 O GLY A 178 ? O GLY A 177 N ASP A 74 ? N ASP A 73 # _database_PDB_matrix.entry_id 4NDJ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4NDJ _atom_sites.fract_transf_matrix[1][1] 0.009577 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009577 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012470 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 0 ? ? ? A . n A 1 2 THR 2 1 1 THR THR A . n A 1 3 GLU 3 2 2 GLU GLU A . n A 1 4 PHE 4 3 3 PHE PHE A . n A 1 5 SER 5 4 4 SER SER A . n A 1 6 GLU 6 5 5 GLU GLU A . n A 1 7 GLU 7 6 6 GLU GLU A . n A 1 8 GLN 8 7 7 GLN GLN A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 LYS 10 9 9 LYS LYS A . n A 1 11 ALA 11 10 10 ALA ALA A . n A 1 12 LEU 12 11 11 LEU LEU A . n A 1 13 ASP 13 12 12 ASP ASP A . n A 1 14 LEU 14 13 13 LEU LEU A . n A 1 15 ALA 15 14 14 ALA ALA A . n A 1 16 PHE 16 15 15 PHE PHE A . n A 1 17 TYR 17 16 16 TYR TYR A . n A 1 18 PHE 18 17 17 PHE PHE A . n A 1 19 ASP 19 18 18 ASP ASP A . n A 1 20 ARG 20 19 19 ARG ARG A . n A 1 21 ARG 21 20 20 ARG ARG A . n A 1 22 LEU 22 21 21 LEU LEU A . n A 1 23 THR 23 22 22 THR THR A . n A 1 24 GLU 24 23 23 GLU GLU A . n A 1 25 GLU 25 24 24 GLU GLU A . n A 1 26 TRP 26 25 25 TRP TRP A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 ARG 28 27 27 ARG ARG A . n A 1 29 TYR 29 28 28 TYR TYR A . n A 1 30 LEU 30 29 29 LEU LEU A . n A 1 31 SER 31 30 30 SER SER A . n A 1 32 GLN 32 31 31 GLN GLN A . n A 1 33 ARG 33 32 32 ARG ARG A . n A 1 34 LEU 34 33 33 LEU LEU A . n A 1 35 GLY 35 34 34 GLY GLY A . n A 1 36 LEU 36 35 35 LEU LEU A . n A 1 37 ASN 37 36 36 ASN ASN A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 GLU 39 38 38 GLU GLU A . n A 1 40 GLN 40 39 39 GLN GLN A . n A 1 41 ILE 41 40 40 ILE ILE A . n A 1 42 GLU 42 41 41 GLU GLU A . n A 1 43 ARG 43 42 42 ARG ARG A . n A 1 44 TRP 44 43 43 TRP TRP A . n A 1 45 PHE 45 44 44 PHE PHE A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ARG 47 46 46 ARG ARG A . n A 1 48 LYS 48 47 47 LYS LYS A . n A 1 49 GLU 49 48 48 GLU GLU A . n A 1 50 GLN 50 49 49 GLN GLN A . n A 1 51 GLN 51 50 50 GLN GLN A . n A 1 52 ILE 52 51 51 ILE ILE A . n A 1 53 MET 53 52 52 MET MET A . n A 1 54 VAL 54 53 53 VAL VAL A . n A 1 55 SER 55 54 54 SER SER A . n A 1 56 LYS 56 55 55 LYS LYS A . n A 1 57 GLY 57 56 56 GLY GLY A . n A 1 58 GLU 58 57 57 GLU GLU A . n A 1 59 GLU 59 58 58 GLU GLU A . n A 1 60 LEU 60 59 59 LEU LEU A . n A 1 61 PHE 61 60 60 PHE PHE A . n A 1 62 THR 62 61 61 THR THR A . n A 1 63 GLY 63 62 62 GLY GLY A . n A 1 64 VAL 64 63 63 VAL VAL A . n A 1 65 VAL 65 64 64 VAL VAL A . n A 1 66 PRO 66 65 65 PRO PRO A . n A 1 67 ILE 67 66 66 ILE ILE A . n A 1 68 LEU 68 67 67 LEU LEU A . n A 1 69 VAL 69 68 68 VAL VAL A . n A 1 70 GLU 70 69 69 GLU GLU A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 ASP 72 71 71 ASP ASP A . n A 1 73 GLY 73 72 72 GLY GLY A . n A 1 74 ASP 74 73 73 ASP ASP A . n A 1 75 VAL 75 74 74 VAL VAL A . n A 1 76 ASN 76 75 75 ASN ASN A . n A 1 77 GLY 77 76 76 GLY GLY A . n A 1 78 HIS 78 77 77 HIS HIS A . n A 1 79 LYS 79 78 78 LYS LYS A . n A 1 80 PHE 80 79 79 PHE PHE A . n A 1 81 SER 81 80 80 SER SER A . n A 1 82 VAL 82 81 81 VAL VAL A . n A 1 83 SER 83 82 82 SER SER A . n A 1 84 GLY 84 83 83 GLY GLY A . n A 1 85 GLU 85 84 84 GLU GLU A . n A 1 86 GLY 86 85 85 GLY GLY A . n A 1 87 GLU 87 86 86 GLU GLU A . n A 1 88 GLY 88 87 87 GLY GLY A . n A 1 89 ASP 89 88 88 ASP ASP A . n A 1 90 ALA 90 89 89 ALA ALA A . n A 1 91 THR 91 90 90 THR THR A . n A 1 92 TYR 92 91 91 TYR TYR A . n A 1 93 GLY 93 92 92 GLY GLY A . n A 1 94 LYS 94 93 93 LYS LYS A . n A 1 95 LEU 95 94 94 LEU LEU A . n A 1 96 THR 96 95 95 THR THR A . n A 1 97 LEU 97 96 96 LEU LEU A . n A 1 98 LYS 98 97 97 LYS LYS A . n A 1 99 LEU 99 98 98 LEU LEU A . n A 1 100 ILE 100 99 99 ILE ILE A . n A 1 101 CYS 101 100 100 CYS CYS A . n A 1 102 THR 102 101 101 THR THR A . n A 1 103 THR 103 102 102 THR THR A . n A 1 104 GLY 104 103 103 GLY GLY A . n A 1 105 LYS 105 104 104 LYS LYS A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 PRO 107 106 106 PRO PRO A . n A 1 108 VAL 108 107 107 VAL VAL A . n A 1 109 PRO 109 108 108 PRO PRO A . n A 1 110 TRP 110 109 109 TRP TRP A . n A 1 111 PRO 111 110 110 PRO PRO A . n A 1 112 THR 112 111 111 THR THR A . n A 1 113 LEU 113 112 112 LEU LEU A . n A 1 114 VAL 114 113 113 VAL VAL A . n A 1 115 THR 115 114 114 THR THR A . n A 1 116 THR 116 115 115 THR THR A . n A 1 117 LEU 117 116 116 LEU LEU A . n A 1 118 CR2 118 117 117 CR2 CR2 A . n A 1 119 LEU 119 118 118 LEU LEU A . n A 1 120 GLN 120 119 119 GLN GLN A . n A 1 121 CYS 121 120 120 CYS CYS A . n A 1 122 PHE 122 121 121 PHE PHE A . n A 1 123 ALA 123 122 122 ALA ALA A . n A 1 124 ARG 124 123 123 ARG ARG A . n A 1 125 TYR 125 124 124 TYR TYR A . n A 1 126 PRO 126 125 125 PRO PRO A . n A 1 127 ASP 127 126 126 ASP ASP A . n A 1 128 HIS 128 127 127 HIS HIS A . n A 1 129 MET 129 128 128 MET MET A . n A 1 130 LYS 130 129 129 LYS LYS A . n A 1 131 GLN 131 130 130 GLN GLN A . n A 1 132 HIS 132 131 131 HIS HIS A . n A 1 133 ASP 133 132 132 ASP ASP A . n A 1 134 PHE 134 133 133 PHE PHE A . n A 1 135 PHE 135 134 134 PHE PHE A . n A 1 136 LYS 136 135 135 LYS LYS A . n A 1 137 SER 137 136 136 SER SER A . n A 1 138 ALA 138 137 137 ALA ALA A . n A 1 139 MET 139 138 138 MET MET A . n A 1 140 PRO 140 139 139 PRO PRO A . n A 1 141 GLU 141 140 140 GLU GLU A . n A 1 142 GLY 142 141 141 GLY GLY A . n A 1 143 TYR 143 142 142 TYR TYR A . n A 1 144 VAL 144 143 143 VAL VAL A . n A 1 145 GLN 145 144 144 GLN GLN A . n A 1 146 GLU 146 145 145 GLU GLU A . n A 1 147 ARG 147 146 146 ARG ARG A . n A 1 148 THR 148 147 147 THR THR A . n A 1 149 ILE 149 148 148 ILE ILE A . n A 1 150 PHE 150 149 149 PHE PHE A . n A 1 151 PHE 151 150 150 PHE PHE A . n A 1 152 LYS 152 151 151 LYS LYS A . n A 1 153 ASP 153 152 152 ASP ASP A . n A 1 154 ASP 154 153 153 ASP ASP A . n A 1 155 GLY 155 154 154 GLY GLY A . n A 1 156 ASN 156 155 155 ASN ASN A . n A 1 157 TYR 157 156 156 TYR TYR A . n A 1 158 LYS 158 157 157 LYS LYS A . n A 1 159 THR 159 158 158 THR THR A . n A 1 160 ARG 160 159 159 ARG ARG A . n A 1 161 ALA 161 160 160 ALA ALA A . n A 1 162 GLU 162 161 161 GLU GLU A . n A 1 163 VAL 163 162 162 VAL VAL A . n A 1 164 LYS 164 163 163 LYS LYS A . n A 1 165 PHE 165 164 164 PHE PHE A . n A 1 166 GLU 166 165 165 GLU GLU A . n A 1 167 GLY 167 166 166 GLY GLY A . n A 1 168 ASP 168 167 167 ASP ASP A . n A 1 169 THR 169 168 168 THR THR A . n A 1 170 LEU 170 169 169 LEU LEU A . n A 1 171 VAL 171 170 170 VAL VAL A . n A 1 172 ASN 172 171 171 ASN ASN A . n A 1 173 ARG 173 172 172 ARG ARG A . n A 1 174 ILE 174 173 173 ILE ILE A . n A 1 175 GLU 175 174 174 GLU GLU A . n A 1 176 LEU 176 175 175 LEU LEU A . n A 1 177 LYS 177 176 176 LYS LYS A . n A 1 178 GLY 178 177 177 GLY GLY A . n A 1 179 ILE 179 178 178 ILE ILE A . n A 1 180 ASP 180 179 179 ASP ASP A . n A 1 181 PHE 181 180 180 PHE PHE A . n A 1 182 LYS 182 181 181 LYS LYS A . n A 1 183 GLU 183 182 182 GLU GLU A . n A 1 184 ASP 184 183 183 ASP ASP A . n A 1 185 GLY 185 184 184 GLY GLY A . n A 1 186 ASN 186 185 185 ASN ASN A . n A 1 187 ILE 187 186 186 ILE ILE A . n A 1 188 LEU 188 187 187 LEU LEU A . n A 1 189 GLY 189 188 188 GLY GLY A . n A 1 190 HIS 190 189 189 HIS HIS A . n A 1 191 LYS 191 190 190 LYS LYS A . n A 1 192 LEU 192 191 191 LEU LEU A . n A 1 193 GLU 193 192 192 GLU GLU A . n A 1 194 TYR 194 193 193 TYR TYR A . n A 1 195 ASN 195 194 194 ASN ASN A . n A 1 196 TYR 196 195 195 TYR TYR A . n A 1 197 ASN 197 196 196 ASN ASN A . n A 1 198 SER 198 197 197 SER SER A . n A 1 199 HIS 199 198 198 HIS HIS A . n A 1 200 ASN 200 199 199 ASN ASN A . n A 1 201 VAL 201 200 200 VAL VAL A . n A 1 202 TYR 202 201 201 TYR TYR A . n A 1 203 ILE 203 202 202 ILE ILE A . n A 1 204 THR 204 203 203 THR THR A . n A 1 205 ALA 205 204 204 ALA ALA A . n A 1 206 ASP 206 205 205 ASP ASP A . n A 1 207 LYS 207 206 206 LYS LYS A . n A 1 208 GLN 208 207 207 GLN GLN A . n A 1 209 LYS 209 208 208 LYS LYS A . n A 1 210 ASN 210 209 209 ASN ASN A . n A 1 211 GLY 211 210 210 GLY GLY A . n A 1 212 ILE 212 211 211 ILE ILE A . n A 1 213 LYS 213 212 212 LYS LYS A . n A 1 214 ALA 214 213 213 ALA ALA A . n A 1 215 ASN 215 214 214 ASN ASN A . n A 1 216 PHE 216 215 215 PHE PHE A . n A 1 217 LYS 217 216 216 LYS LYS A . n A 1 218 ILE 218 217 217 ILE ILE A . n A 1 219 ARG 219 218 218 ARG ARG A . n A 1 220 HIS 220 219 219 HIS HIS A . n A 1 221 ASN 221 220 220 ASN ASN A . n A 1 222 ILE 222 221 221 ILE ILE A . n A 1 223 GLU 223 222 222 GLU GLU A . n A 1 224 ASP 224 223 223 ASP ASP A . n A 1 225 GLY 225 224 224 GLY GLY A . n A 1 226 GLY 226 225 225 GLY GLY A . n A 1 227 VAL 227 226 226 VAL VAL A . n A 1 228 GLN 228 227 227 GLN GLN A . n A 1 229 LEU 229 228 228 LEU LEU A . n A 1 230 ALA 230 229 229 ALA ALA A . n A 1 231 ASP 231 230 230 ASP ASP A . n A 1 232 HIS 232 231 231 HIS HIS A . n A 1 233 TYR 233 232 232 TYR TYR A . n A 1 234 GLN 234 233 233 GLN GLN A . n A 1 235 GLN 235 234 234 GLN GLN A . n A 1 236 ASN 236 235 235 ASN ASN A . n A 1 237 THR 237 236 236 THR THR A . n A 1 238 PRO 238 237 237 PRO PRO A . n A 1 239 ILE 239 238 238 ILE ILE A . n A 1 240 GLY 240 239 239 GLY GLY A . n A 1 241 ASP 241 240 240 ASP ASP A . n A 1 242 GLY 242 241 241 GLY GLY A . n A 1 243 PRO 243 242 242 PRO PRO A . n A 1 244 VAL 244 243 243 VAL VAL A . n A 1 245 LEU 245 244 244 LEU LEU A . n A 1 246 LEU 246 245 245 LEU LEU A . n A 1 247 PRO 247 246 246 PRO PRO A . n A 1 248 ASP 248 247 247 ASP ASP A . n A 1 249 ASN 249 248 248 ASN ASN A . n A 1 250 HIS 250 249 249 HIS HIS A . n A 1 251 TYR 251 250 250 TYR TYR A . n A 1 252 LEU 252 251 251 LEU LEU A . n A 1 253 SER 253 252 252 SER SER A . n A 1 254 TYR 254 253 253 TYR TYR A . n A 1 255 GLN 255 254 254 GLN GLN A . n A 1 256 SER 256 255 255 SER SER A . n A 1 257 LYS 257 256 256 LYS LYS A . n A 1 258 LEU 258 257 257 LEU LEU A . n A 1 259 SER 259 258 258 SER SER A . n A 1 260 LYS 260 259 259 LYS LYS A . n A 1 261 ASP 261 260 260 ASP ASP A . n A 1 262 PRO 262 261 261 PRO PRO A . n A 1 263 ASN 263 262 262 ASN ASN A . n A 1 264 GLU 264 263 263 GLU GLU A . n A 1 265 LYS 265 264 264 LYS LYS A . n A 1 266 ARG 266 265 265 ARG ARG A . n A 1 267 ASP 267 266 266 ASP ASP A . n A 1 268 HIS 268 267 267 HIS HIS A . n A 1 269 MET 269 268 268 MET MET A . n A 1 270 VAL 270 269 269 VAL VAL A . n A 1 271 LEU 271 270 270 LEU LEU A . n A 1 272 LEU 272 271 271 LEU LEU A . n A 1 273 GLU 273 272 272 GLU GLU A . n A 1 274 PHE 274 273 273 PHE PHE A . n A 1 275 VAL 275 274 274 VAL VAL A . n A 1 276 THR 276 275 275 THR THR A . n A 1 277 ALA 277 276 276 ALA ALA A . n A 1 278 ALA 278 277 277 ALA ALA A . n A 1 279 GLY 279 278 278 GLY GLY A . n A 1 280 ILE 280 279 279 ILE ILE A . n A 1 281 THR 281 280 280 THR THR A . n A 1 282 LEU 282 281 ? ? ? A . n A 1 283 GLY 283 282 ? ? ? A . n A 1 284 MET 284 283 ? ? ? A . n A 1 285 ASP 285 284 ? ? ? A . n A 1 286 GLU 286 285 ? ? ? A . n A 1 287 LEU 287 286 ? ? ? A . n A 1 288 TYR 288 287 ? ? ? A . n A 1 289 LYS 289 288 ? ? ? A . n A 1 290 GLY 290 289 ? ? ? A . n A 1 291 GLY 291 290 ? ? ? A . n A 1 292 HIS 292 291 ? ? ? A . n A 1 293 HIS 293 292 ? ? ? A . n A 1 294 HIS 294 293 ? ? ? A . n A 1 295 HIS 295 294 ? ? ? A . n A 1 296 HIS 296 295 ? ? ? A . n A 1 297 HIS 297 296 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . B 2 HOH 8 308 8 HOH HOH A . B 2 HOH 9 309 9 HOH HOH A . B 2 HOH 10 310 10 HOH HOH A . B 2 HOH 11 311 11 HOH HOH A . B 2 HOH 12 312 12 HOH HOH A . B 2 HOH 13 313 13 HOH HOH A . B 2 HOH 14 314 14 HOH HOH A . B 2 HOH 15 315 15 HOH HOH A . B 2 HOH 16 316 16 HOH HOH A . B 2 HOH 17 317 17 HOH HOH A . B 2 HOH 18 318 18 HOH HOH A . B 2 HOH 19 319 19 HOH HOH A . B 2 HOH 20 320 20 HOH HOH A . B 2 HOH 21 321 21 HOH HOH A . B 2 HOH 22 322 22 HOH HOH A . B 2 HOH 23 323 23 HOH HOH A . B 2 HOH 24 324 24 HOH HOH A . B 2 HOH 25 325 25 HOH HOH A . B 2 HOH 26 326 26 HOH HOH A . B 2 HOH 27 327 27 HOH HOH A . B 2 HOH 28 328 28 HOH HOH A . B 2 HOH 29 329 29 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 31 HOH HOH A . B 2 HOH 32 332 32 HOH HOH A . B 2 HOH 33 333 33 HOH HOH A . B 2 HOH 34 334 34 HOH HOH A . B 2 HOH 35 335 35 HOH HOH A . B 2 HOH 36 336 36 HOH HOH A . B 2 HOH 37 337 37 HOH HOH A . B 2 HOH 38 338 38 HOH HOH A . B 2 HOH 39 339 39 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 41 HOH HOH A . B 2 HOH 42 342 42 HOH HOH A . B 2 HOH 43 343 43 HOH HOH A . B 2 HOH 44 344 44 HOH HOH A . B 2 HOH 45 345 45 HOH HOH A . B 2 HOH 46 346 46 HOH HOH A . B 2 HOH 47 347 47 HOH HOH A . B 2 HOH 48 348 48 HOH HOH A . B 2 HOH 49 349 49 HOH HOH A . B 2 HOH 50 350 50 HOH HOH A . B 2 HOH 51 351 51 HOH HOH A . B 2 HOH 52 352 52 HOH HOH A . B 2 HOH 53 353 53 HOH HOH A . B 2 HOH 54 354 54 HOH HOH A . B 2 HOH 55 355 55 HOH HOH A . B 2 HOH 56 356 56 HOH HOH A . B 2 HOH 57 357 57 HOH HOH A . B 2 HOH 58 358 58 HOH HOH A . B 2 HOH 59 359 59 HOH HOH A . B 2 HOH 60 360 60 HOH HOH A . B 2 HOH 61 361 61 HOH HOH A . B 2 HOH 62 362 62 HOH HOH A . B 2 HOH 63 363 63 HOH HOH A . B 2 HOH 64 364 64 HOH HOH A . B 2 HOH 65 365 65 HOH HOH A . B 2 HOH 66 366 66 HOH HOH A . B 2 HOH 67 367 67 HOH HOH A . B 2 HOH 68 368 68 HOH HOH A . B 2 HOH 69 369 69 HOH HOH A . B 2 HOH 70 370 70 HOH HOH A . B 2 HOH 71 371 71 HOH HOH A . B 2 HOH 72 372 72 HOH HOH A . B 2 HOH 73 373 73 HOH HOH A . B 2 HOH 74 374 74 HOH HOH A . B 2 HOH 75 375 75 HOH HOH A . B 2 HOH 76 376 76 HOH HOH A . B 2 HOH 77 377 77 HOH HOH A . B 2 HOH 78 378 78 HOH HOH A . B 2 HOH 79 379 79 HOH HOH A . B 2 HOH 80 380 80 HOH HOH A . B 2 HOH 81 381 81 HOH HOH A . B 2 HOH 82 382 82 HOH HOH A . B 2 HOH 83 383 83 HOH HOH A . B 2 HOH 84 384 84 HOH HOH A . B 2 HOH 85 385 85 HOH HOH A . B 2 HOH 86 386 86 HOH HOH A . B 2 HOH 87 387 87 HOH HOH A . B 2 HOH 88 388 88 HOH HOH A . B 2 HOH 89 389 89 HOH HOH A . B 2 HOH 90 390 90 HOH HOH A . B 2 HOH 91 391 91 HOH HOH A . B 2 HOH 92 392 92 HOH HOH A . B 2 HOH 93 393 93 HOH HOH A . B 2 HOH 94 394 94 HOH HOH A . B 2 HOH 95 395 95 HOH HOH A . B 2 HOH 96 396 96 HOH HOH A . B 2 HOH 97 397 97 HOH HOH A . B 2 HOH 98 398 98 HOH HOH A . B 2 HOH 99 399 99 HOH HOH A . B 2 HOH 100 400 100 HOH HOH A . B 2 HOH 101 401 101 HOH HOH A . B 2 HOH 102 402 102 HOH HOH A . B 2 HOH 103 403 103 HOH HOH A . B 2 HOH 104 404 104 HOH HOH A . B 2 HOH 105 405 105 HOH HOH A . B 2 HOH 106 406 106 HOH HOH A . B 2 HOH 107 407 107 HOH HOH A . B 2 HOH 108 408 108 HOH HOH A . B 2 HOH 109 409 109 HOH HOH A . B 2 HOH 110 410 110 HOH HOH A . B 2 HOH 111 411 111 HOH HOH A . B 2 HOH 112 412 112 HOH HOH A . B 2 HOH 113 413 113 HOH HOH A . B 2 HOH 114 414 114 HOH HOH A . B 2 HOH 115 415 115 HOH HOH A . B 2 HOH 116 416 116 HOH HOH A . B 2 HOH 117 417 117 HOH HOH A . B 2 HOH 118 418 118 HOH HOH A . B 2 HOH 119 419 119 HOH HOH A . B 2 HOH 120 420 120 HOH HOH A . B 2 HOH 121 421 121 HOH HOH A . B 2 HOH 122 422 122 HOH HOH A . B 2 HOH 123 423 123 HOH HOH A . B 2 HOH 124 424 124 HOH HOH A . B 2 HOH 125 425 125 HOH HOH A . B 2 HOH 126 426 126 HOH HOH A . B 2 HOH 127 427 127 HOH HOH A . B 2 HOH 128 428 128 HOH HOH A . B 2 HOH 129 429 129 HOH HOH A . B 2 HOH 130 430 130 HOH HOH A . B 2 HOH 131 431 131 HOH HOH A . B 2 HOH 132 432 132 HOH HOH A . B 2 HOH 133 433 133 HOH HOH A . B 2 HOH 134 434 134 HOH HOH A . B 2 HOH 135 435 135 HOH HOH A . B 2 HOH 136 436 136 HOH HOH A . B 2 HOH 137 437 137 HOH HOH A . B 2 HOH 138 438 138 HOH HOH A . B 2 HOH 139 439 139 HOH HOH A . B 2 HOH 140 440 140 HOH HOH A . B 2 HOH 141 441 141 HOH HOH A . B 2 HOH 142 442 142 HOH HOH A . B 2 HOH 143 443 143 HOH HOH A . B 2 HOH 144 444 144 HOH HOH A . B 2 HOH 145 445 145 HOH HOH A . B 2 HOH 146 446 146 HOH HOH A . B 2 HOH 147 447 147 HOH HOH A . B 2 HOH 148 448 148 HOH HOH A . B 2 HOH 149 449 149 HOH HOH A . B 2 HOH 150 450 150 HOH HOH A . B 2 HOH 151 451 151 HOH HOH A . B 2 HOH 152 452 152 HOH HOH A . B 2 HOH 153 453 153 HOH HOH A . B 2 HOH 154 454 154 HOH HOH A . B 2 HOH 155 455 155 HOH HOH A . B 2 HOH 156 456 156 HOH HOH A . B 2 HOH 157 457 157 HOH HOH A . B 2 HOH 158 458 158 HOH HOH A . B 2 HOH 159 459 159 HOH HOH A . B 2 HOH 160 460 160 HOH HOH A . B 2 HOH 161 461 161 HOH HOH A . B 2 HOH 162 462 162 HOH HOH A . B 2 HOH 163 463 163 HOH HOH A . B 2 HOH 164 464 164 HOH HOH A . B 2 HOH 165 465 165 HOH HOH A . B 2 HOH 166 466 166 HOH HOH A . B 2 HOH 167 467 167 HOH HOH A . B 2 HOH 168 468 168 HOH HOH A . B 2 HOH 169 469 169 HOH HOH A . B 2 HOH 170 470 170 HOH HOH A . B 2 HOH 171 471 171 HOH HOH A . B 2 HOH 172 472 172 HOH HOH A . B 2 HOH 173 473 173 HOH HOH A . B 2 HOH 174 474 174 HOH HOH A . B 2 HOH 175 475 175 HOH HOH A . B 2 HOH 176 476 176 HOH HOH A . B 2 HOH 177 477 177 HOH HOH A . B 2 HOH 178 478 178 HOH HOH A . B 2 HOH 179 479 179 HOH HOH A . B 2 HOH 180 480 180 HOH HOH A . B 2 HOH 181 481 181 HOH HOH A . B 2 HOH 182 482 182 HOH HOH A . B 2 HOH 183 483 183 HOH HOH A . B 2 HOH 184 484 184 HOH HOH A . B 2 HOH 185 485 185 HOH HOH A . B 2 HOH 186 486 186 HOH HOH A . B 2 HOH 187 487 187 HOH HOH A . B 2 HOH 188 488 188 HOH HOH A . B 2 HOH 189 489 189 HOH HOH A . B 2 HOH 190 490 190 HOH HOH A . B 2 HOH 191 491 191 HOH HOH A . B 2 HOH 192 492 192 HOH HOH A . B 2 HOH 193 493 193 HOH HOH A . B 2 HOH 194 494 194 HOH HOH A . B 2 HOH 195 495 195 HOH HOH A . B 2 HOH 196 496 196 HOH HOH A . B 2 HOH 197 497 197 HOH HOH A . B 2 HOH 198 498 198 HOH HOH A . B 2 HOH 199 499 199 HOH HOH A . B 2 HOH 200 500 200 HOH HOH A . B 2 HOH 201 501 201 HOH HOH A . B 2 HOH 202 502 202 HOH HOH A . B 2 HOH 203 503 203 HOH HOH A . B 2 HOH 204 504 204 HOH HOH A . B 2 HOH 205 505 205 HOH HOH A . B 2 HOH 206 506 206 HOH HOH A . B 2 HOH 207 507 207 HOH HOH A . B 2 HOH 208 508 208 HOH HOH A . B 2 HOH 209 509 209 HOH HOH A . B 2 HOH 210 510 210 HOH HOH A . B 2 HOH 211 511 211 HOH HOH A . B 2 HOH 212 512 212 HOH HOH A . B 2 HOH 213 513 213 HOH HOH A . B 2 HOH 214 514 514 HOH HOH A . B 2 HOH 215 515 215 HOH HOH A . B 2 HOH 216 516 216 HOH HOH A . B 2 HOH 217 517 217 HOH HOH A . B 2 HOH 218 518 218 HOH HOH A . B 2 HOH 219 519 219 HOH HOH A . B 2 HOH 220 520 220 HOH HOH A . B 2 HOH 221 521 221 HOH HOH A . B 2 HOH 222 522 222 HOH HOH A . B 2 HOH 223 523 223 HOH HOH A . B 2 HOH 224 524 224 HOH HOH A . B 2 HOH 225 525 225 HOH HOH A . B 2 HOH 226 526 226 HOH HOH A . B 2 HOH 227 527 227 HOH HOH A . B 2 HOH 228 528 228 HOH HOH A . B 2 HOH 229 529 229 HOH HOH A . B 2 HOH 230 530 230 HOH HOH A . B 2 HOH 231 531 231 HOH HOH A . B 2 HOH 232 532 232 HOH HOH A . B 2 HOH 233 533 233 HOH HOH A . B 2 HOH 234 534 234 HOH HOH A . B 2 HOH 235 535 235 HOH HOH A . B 2 HOH 236 536 236 HOH HOH A . B 2 HOH 237 537 237 HOH HOH A . B 2 HOH 238 538 238 HOH HOH A . B 2 HOH 239 539 239 HOH HOH A . B 2 HOH 240 540 240 HOH HOH A . B 2 HOH 241 541 241 HOH HOH A . B 2 HOH 242 542 242 HOH HOH A . B 2 HOH 243 543 243 HOH HOH A . B 2 HOH 244 544 244 HOH HOH A . B 2 HOH 245 545 245 HOH HOH A . B 2 HOH 246 546 246 HOH HOH A . B 2 HOH 247 547 247 HOH HOH A . B 2 HOH 248 548 248 HOH HOH A . B 2 HOH 249 549 249 HOH HOH A . B 2 HOH 250 550 250 HOH HOH A . B 2 HOH 251 551 251 HOH HOH A . B 2 HOH 252 552 252 HOH HOH A . B 2 HOH 253 553 253 HOH HOH A . B 2 HOH 254 554 254 HOH HOH A . B 2 HOH 255 555 255 HOH HOH A . B 2 HOH 256 556 256 HOH HOH A . B 2 HOH 257 557 257 HOH HOH A . B 2 HOH 258 558 258 HOH HOH A . B 2 HOH 259 559 259 HOH HOH A . B 2 HOH 260 560 260 HOH HOH A . B 2 HOH 261 561 261 HOH HOH A . B 2 HOH 262 562 262 HOH HOH A . B 2 HOH 263 563 263 HOH HOH A . B 2 HOH 264 564 264 HOH HOH A . B 2 HOH 265 565 265 HOH HOH A . B 2 HOH 266 566 266 HOH HOH A . B 2 HOH 267 567 267 HOH HOH A . B 2 HOH 268 568 268 HOH HOH A . B 2 HOH 269 569 269 HOH HOH A . B 2 HOH 270 570 270 HOH HOH A . B 2 HOH 271 571 271 HOH HOH A . B 2 HOH 272 572 272 HOH HOH A . B 2 HOH 273 573 273 HOH HOH A . B 2 HOH 274 574 274 HOH HOH A . B 2 HOH 275 575 275 HOH HOH A . B 2 HOH 276 576 276 HOH HOH A . B 2 HOH 277 577 277 HOH HOH A . B 2 HOH 278 578 278 HOH HOH A . B 2 HOH 279 579 279 HOH HOH A . B 2 HOH 280 580 280 HOH HOH A . B 2 HOH 281 581 281 HOH HOH A . B 2 HOH 282 582 282 HOH HOH A . B 2 HOH 283 583 283 HOH HOH A . B 2 HOH 284 584 284 HOH HOH A . B 2 HOH 285 585 285 HOH HOH A . B 2 HOH 286 586 286 HOH HOH A . B 2 HOH 287 587 287 HOH HOH A . B 2 HOH 288 588 288 HOH HOH A . B 2 HOH 289 589 289 HOH HOH A . B 2 HOH 290 590 290 HOH HOH A . B 2 HOH 291 591 291 HOH HOH A . B 2 HOH 292 592 292 HOH HOH A . B 2 HOH 293 593 293 HOH HOH A . B 2 HOH 294 594 294 HOH HOH A . B 2 HOH 295 595 295 HOH HOH A . B 2 HOH 296 596 296 HOH HOH A . B 2 HOH 297 597 297 HOH HOH A . B 2 HOH 298 598 298 HOH HOH A . B 2 HOH 299 599 299 HOH HOH A . B 2 HOH 300 600 300 HOH HOH A . B 2 HOH 301 601 301 HOH HOH A . B 2 HOH 302 602 302 HOH HOH A . B 2 HOH 303 603 303 HOH HOH A . B 2 HOH 304 604 304 HOH HOH A . B 2 HOH 305 605 305 HOH HOH A . B 2 HOH 306 606 306 HOH HOH A . B 2 HOH 307 607 307 HOH HOH A . B 2 HOH 308 608 308 HOH HOH A . B 2 HOH 309 609 309 HOH HOH A . B 2 HOH 310 610 310 HOH HOH A . B 2 HOH 311 611 311 HOH HOH A . B 2 HOH 312 612 312 HOH HOH A . B 2 HOH 313 613 313 HOH HOH A . B 2 HOH 314 614 314 HOH HOH A . B 2 HOH 315 615 315 HOH HOH A . B 2 HOH 316 616 316 HOH HOH A . B 2 HOH 317 617 317 HOH HOH A . B 2 HOH 318 618 318 HOH HOH A . B 2 HOH 319 619 319 HOH HOH A . B 2 HOH 320 620 320 HOH HOH A . B 2 HOH 321 621 321 HOH HOH A . B 2 HOH 322 622 322 HOH HOH A . B 2 HOH 323 623 323 HOH HOH A . B 2 HOH 324 624 324 HOH HOH A . B 2 HOH 325 625 325 HOH HOH A . B 2 HOH 326 626 326 HOH HOH A . B 2 HOH 327 627 327 HOH HOH A . B 2 HOH 328 628 328 HOH HOH A . B 2 HOH 329 629 329 HOH HOH A . B 2 HOH 330 630 330 HOH HOH A . B 2 HOH 331 631 331 HOH HOH A . B 2 HOH 332 632 332 HOH HOH A . B 2 HOH 333 633 333 HOH HOH A . # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id CR2 _pdbx_struct_mod_residue.label_seq_id 118 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id CR2 _pdbx_struct_mod_residue.auth_seq_id 117 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id GLY _pdbx_struct_mod_residue.details chromophore # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4730 ? 1 MORE -15 ? 1 'SSA (A^2)' 25260 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 5_554 -x,y,-z-1 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 -80.1900000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 A HOH 377 ? B HOH . 2 1 A HOH 502 ? B HOH . 3 1 A HOH 514 ? B HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-11-05 2 'Structure model' 1 1 2015-01-28 3 'Structure model' 1 2 2015-07-15 4 'Structure model' 1 3 2015-08-19 5 'Structure model' 1 4 2017-10-18 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Database references' 4 5 'Structure model' Advisory 5 5 'Structure model' 'Database references' 6 5 'Structure model' 'Source and taxonomy' 7 5 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' entity 2 5 'Structure model' entity_src_gen 3 5 'Structure model' pdbx_distant_solvent_atoms 4 5 'Structure model' struct_ref 5 5 'Structure model' struct_ref_seq 6 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_entity.pdbx_description' 2 5 'Structure model' '_struct_ref_seq.db_align_beg' 3 5 'Structure model' '_struct_ref_seq.db_align_end' 4 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_beg' 5 5 'Structure model' '_struct_ref_seq.pdbx_auth_seq_align_end' 6 5 'Structure model' '_struct_ref_seq.pdbx_db_accession' 7 5 'Structure model' '_struct_ref_seq.ref_id' 8 5 'Structure model' '_struct_ref_seq.seq_align_beg' 9 5 'Structure model' '_struct_ref_seq.seq_align_end' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 5.2960 7.1238 -43.7959 0.2024 0.1322 0.3351 0.0203 0.0081 -0.0326 4.0906 3.3086 1.3166 -0.1437 0.5161 -0.2941 0.0995 0.0439 -0.0920 0.3668 -0.3599 -0.4866 -0.4115 0.0773 0.1955 'X-RAY DIFFRACTION' 2 ? refined -10.3216 17.0803 -36.3319 0.2728 0.0881 0.3516 -0.0218 -0.0545 0.0043 0.9042 1.8625 4.7182 0.5026 0.9656 1.0579 0.1727 0.0118 0.0525 -0.0368 0.0326 0.5223 0.1636 -0.1425 -0.1737 'X-RAY DIFFRACTION' 3 ? refined 7.3695 33.8042 -17.7245 0.3218 0.1046 0.1664 0.0136 -0.0111 0.0230 0.9664 1.4694 0.9132 0.3019 0.1853 0.2632 0.0162 -0.0275 0.0047 -0.1257 -0.1880 -0.1385 0.1669 0.2080 0.0247 'X-RAY DIFFRACTION' 4 ? refined 9.7338 44.3445 -23.7799 0.2990 0.1438 0.1771 0.0078 0.0158 0.0063 1.1554 1.3138 0.7482 -0.0988 0.5126 -0.0304 -0.0552 -0.0054 0.0130 0.0819 0.0492 -0.1367 -0.0438 -0.1286 0.1755 'X-RAY DIFFRACTION' 5 ? refined 3.4955 39.6240 -19.8655 0.3167 0.1303 0.1499 0.0004 -0.0089 0.0078 0.5227 1.4319 0.6521 0.0209 0.0272 0.2461 0.0467 -0.0409 -0.0073 -0.0020 -0.0603 -0.0627 0.1077 0.0342 0.0070 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 33 '( CHAIN A AND RESID 1:33 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 34 A 59 '( CHAIN A AND RESID 34:59 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 60 A 178 '( CHAIN A AND RESID 60:178 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 179 A 220 '( CHAIN A AND RESID 179:220 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 221 A 280 '( CHAIN A AND RESID 221:280 )' ? ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal BlueIce 'data collection' . ? 1 PHENIX 'model building' . ? 2 PHENIX refinement '(phenix.refine: 1.8.2_1309)' ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_entry_details.entry_id 4NDJ _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE CRYSTALLIZED SEQUENCE REPRESENTS A FUSED PROTEIN. THE N-TERMINAL SEQUENCE, WHICH IS COMPUTATIONALLY DESIGNED, IS BASED ON THE WILD-TYPE PROTEIN ENGRAILED HOMEODOMAIN (UNIPROT P02836). THE COMPUTATIONAL DESIGN PROCESS IS PURELY PHYSICAL-BASED WITHOUT USING ANY DATABASE ALIGNMENTS ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 434 ? ? O A HOH 442 ? ? 1.89 2 1 O A HOH 543 ? ? O A HOH 631 ? ? 1.92 3 1 O A HOH 417 ? ? O A HOH 561 ? ? 1.94 4 1 O A HOH 302 ? ? O A HOH 459 ? ? 1.95 5 1 O A HOH 405 ? ? O A HOH 545 ? ? 1.95 6 1 NH1 A ARG 218 ? ? O A HOH 414 ? ? 1.99 7 1 O A HOH 445 ? ? O A HOH 588 ? ? 2.00 8 1 O A HOH 565 ? ? O A HOH 630 ? ? 2.02 9 1 NZ A LYS 93 ? ? O A HOH 376 ? ? 2.03 10 1 O A HOH 471 ? ? O A HOH 547 ? ? 2.08 11 1 NH1 A ARG 123 ? ? O A HOH 331 ? ? 2.08 12 1 O A HOH 445 ? ? O A HOH 571 ? ? 2.11 13 1 O A HOH 453 ? ? O A HOH 522 ? ? 2.13 14 1 O A GLU 2 ? ? O A HOH 458 ? ? 2.15 15 1 OD2 A ASP 247 ? ? O A HOH 333 ? ? 2.17 16 1 OH A TYR 28 ? ? O A HOH 593 ? ? 2.18 17 1 O A HOH 333 ? ? O A HOH 541 ? ? 2.18 18 1 O A GLY 34 ? ? O A HOH 427 ? ? 2.19 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 153 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -155.84 _pdbx_validate_torsion.psi -157.72 # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 365 ? 6.00 . 2 1 O ? A HOH 533 ? 8.03 . 3 1 O ? A HOH 574 ? 6.01 . 4 1 O ? A HOH 607 ? 6.92 . # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 0 ? A MET 1 2 1 Y 1 A LEU 281 ? A LEU 282 3 1 Y 1 A GLY 282 ? A GLY 283 4 1 Y 1 A MET 283 ? A MET 284 5 1 Y 1 A ASP 284 ? A ASP 285 6 1 Y 1 A GLU 285 ? A GLU 286 7 1 Y 1 A LEU 286 ? A LEU 287 8 1 Y 1 A TYR 287 ? A TYR 288 9 1 Y 1 A LYS 288 ? A LYS 289 10 1 Y 1 A GLY 289 ? A GLY 290 11 1 Y 1 A GLY 290 ? A GLY 291 12 1 Y 1 A HIS 291 ? A HIS 292 13 1 Y 1 A HIS 292 ? A HIS 293 14 1 Y 1 A HIS 293 ? A HIS 294 15 1 Y 1 A HIS 294 ? A HIS 295 16 1 Y 1 A HIS 295 ? A HIS 296 17 1 Y 1 A HIS 296 ? A HIS 297 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #