data_4NHA # _entry.id 4NHA # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.289 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4NHA NDB NA2761 RCSB RCSB083201 WWPDB D_1000083201 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4NGB . unspecified PDB 4NGC . unspecified PDB 4NGD . unspecified PDB 4NGF . unspecified PDB 4NGG . unspecified PDB 4NH3 . unspecified PDB 4NH5 . unspecified PDB 4NH6 . unspecified # _pdbx_database_status.entry_id 4NHA _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2013-11-04 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Simanshu, D.K.' 1 'Tian, Y.' 2 'Ma, J.-B.' 3 'Patel, D.J.' 4 # _citation.id primary _citation.title 'A Phosphate-Binding Pocket within the Platform-PAZ-Connector Helix Cassette of Human Dicer.' _citation.journal_abbrev Mol.Cell _citation.journal_volume 53 _citation.page_first 606 _citation.page_last 616 _citation.year 2014 _citation.journal_id_ASTM MOCEFL _citation.country US _citation.journal_id_ISSN 1097-2765 _citation.journal_id_CSD 2168 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24486018 _citation.pdbx_database_id_DOI 10.1016/j.molcel.2014.01.003 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tian, Y.' 1 primary 'Simanshu, D.K.' 2 primary 'Ma, J.B.' 3 primary 'Park, J.E.' 4 primary 'Heo, I.' 5 primary 'Kim, V.N.' 6 primary 'Patel, D.J.' 7 # _cell.length_a 174.469 _cell.length_b 174.469 _cell.length_c 74.757 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4NHA _cell.pdbx_unique_axis ? _cell.Z_PDB 16 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'I 41 2 2' _symmetry.entry_id 4NHA _symmetry.Int_Tables_number 98 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Endoribonuclease Dicer' 35232.121 1 3.1.26.- ? 'platform-PAZ-connector helix cassette (UNP residues 765-1065)' ? 2 polymer syn "5'-R(P*GP*CP*GP*UP*UP*GP*GP*CP*CP*AP*AP*CP*GP*CP*UP*U)-3'" 5090.056 1 ? ? ? siRNA # _entity_name_com.entity_id 1 _entity_name_com.name 'Helicase with RNase motif, Helicase MOI' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no yes ;SDQPCYLYVIG(MSE)VLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGF (MSE)LSLQ(MSE)LELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKF(MSE)EDIEKSE ARIGIPSTKYTKETPFVFKLEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLN QPLLDVDHTSSRLNLLTPRHLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCL L ; ;SDQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSLQML ELITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYTKETPFVFK LEDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPR HLNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLL ; A ? 2 polyribonucleotide no no GCGUUGGCCAACGCUU GCGUUGGCCAACGCUU B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASP n 1 3 GLN n 1 4 PRO n 1 5 CYS n 1 6 TYR n 1 7 LEU n 1 8 TYR n 1 9 VAL n 1 10 ILE n 1 11 GLY n 1 12 MSE n 1 13 VAL n 1 14 LEU n 1 15 THR n 1 16 THR n 1 17 PRO n 1 18 LEU n 1 19 PRO n 1 20 ASP n 1 21 GLU n 1 22 LEU n 1 23 ASN n 1 24 PHE n 1 25 ARG n 1 26 ARG n 1 27 ARG n 1 28 LYS n 1 29 LEU n 1 30 TYR n 1 31 PRO n 1 32 PRO n 1 33 GLU n 1 34 ASP n 1 35 THR n 1 36 THR n 1 37 ARG n 1 38 CYS n 1 39 PHE n 1 40 GLY n 1 41 ILE n 1 42 LEU n 1 43 THR n 1 44 ALA n 1 45 LYS n 1 46 PRO n 1 47 ILE n 1 48 PRO n 1 49 GLN n 1 50 ILE n 1 51 PRO n 1 52 HIS n 1 53 PHE n 1 54 PRO n 1 55 VAL n 1 56 TYR n 1 57 THR n 1 58 ARG n 1 59 SER n 1 60 GLY n 1 61 GLU n 1 62 VAL n 1 63 THR n 1 64 ILE n 1 65 SER n 1 66 ILE n 1 67 GLU n 1 68 LEU n 1 69 LYS n 1 70 LYS n 1 71 SER n 1 72 GLY n 1 73 PHE n 1 74 MSE n 1 75 LEU n 1 76 SER n 1 77 LEU n 1 78 GLN n 1 79 MSE n 1 80 LEU n 1 81 GLU n 1 82 LEU n 1 83 ILE n 1 84 THR n 1 85 ARG n 1 86 LEU n 1 87 HIS n 1 88 GLN n 1 89 TYR n 1 90 ILE n 1 91 PHE n 1 92 SER n 1 93 HIS n 1 94 ILE n 1 95 LEU n 1 96 ARG n 1 97 LEU n 1 98 GLU n 1 99 LYS n 1 100 PRO n 1 101 ALA n 1 102 LEU n 1 103 GLU n 1 104 PHE n 1 105 LYS n 1 106 PRO n 1 107 THR n 1 108 ASP n 1 109 ALA n 1 110 ASP n 1 111 SER n 1 112 ALA n 1 113 TYR n 1 114 CYS n 1 115 VAL n 1 116 LEU n 1 117 PRO n 1 118 LEU n 1 119 ASN n 1 120 VAL n 1 121 VAL n 1 122 ASN n 1 123 ASP n 1 124 SER n 1 125 SER n 1 126 THR n 1 127 LEU n 1 128 ASP n 1 129 ILE n 1 130 ASP n 1 131 PHE n 1 132 LYS n 1 133 PHE n 1 134 MSE n 1 135 GLU n 1 136 ASP n 1 137 ILE n 1 138 GLU n 1 139 LYS n 1 140 SER n 1 141 GLU n 1 142 ALA n 1 143 ARG n 1 144 ILE n 1 145 GLY n 1 146 ILE n 1 147 PRO n 1 148 SER n 1 149 THR n 1 150 LYS n 1 151 TYR n 1 152 THR n 1 153 LYS n 1 154 GLU n 1 155 THR n 1 156 PRO n 1 157 PHE n 1 158 VAL n 1 159 PHE n 1 160 LYS n 1 161 LEU n 1 162 GLU n 1 163 ASP n 1 164 TYR n 1 165 GLN n 1 166 ASP n 1 167 ALA n 1 168 VAL n 1 169 ILE n 1 170 ILE n 1 171 PRO n 1 172 ARG n 1 173 TYR n 1 174 ARG n 1 175 ASN n 1 176 PHE n 1 177 ASP n 1 178 GLN n 1 179 PRO n 1 180 HIS n 1 181 ARG n 1 182 PHE n 1 183 TYR n 1 184 VAL n 1 185 ALA n 1 186 ASP n 1 187 VAL n 1 188 TYR n 1 189 THR n 1 190 ASP n 1 191 LEU n 1 192 THR n 1 193 PRO n 1 194 LEU n 1 195 SER n 1 196 LYS n 1 197 PHE n 1 198 PRO n 1 199 SER n 1 200 PRO n 1 201 GLU n 1 202 TYR n 1 203 GLU n 1 204 THR n 1 205 PHE n 1 206 ALA n 1 207 GLU n 1 208 TYR n 1 209 TYR n 1 210 LYS n 1 211 THR n 1 212 LYS n 1 213 TYR n 1 214 ASN n 1 215 LEU n 1 216 ASP n 1 217 LEU n 1 218 THR n 1 219 ASN n 1 220 LEU n 1 221 ASN n 1 222 GLN n 1 223 PRO n 1 224 LEU n 1 225 LEU n 1 226 ASP n 1 227 VAL n 1 228 ASP n 1 229 HIS n 1 230 THR n 1 231 SER n 1 232 SER n 1 233 ARG n 1 234 LEU n 1 235 ASN n 1 236 LEU n 1 237 LEU n 1 238 THR n 1 239 PRO n 1 240 ARG n 1 241 HIS n 1 242 LEU n 1 243 ASN n 1 244 GLN n 1 245 LYS n 1 246 GLY n 1 247 LYS n 1 248 ALA n 1 249 LEU n 1 250 PRO n 1 251 LEU n 1 252 SER n 1 253 SER n 1 254 ALA n 1 255 GLU n 1 256 LYS n 1 257 ARG n 1 258 LYS n 1 259 ALA n 1 260 LYS n 1 261 TRP n 1 262 GLU n 1 263 SER n 1 264 LEU n 1 265 GLN n 1 266 ASN n 1 267 LYS n 1 268 GLN n 1 269 ILE n 1 270 LEU n 1 271 VAL n 1 272 PRO n 1 273 GLU n 1 274 LEU n 1 275 CYS n 1 276 ALA n 1 277 ILE n 1 278 HIS n 1 279 PRO n 1 280 ILE n 1 281 PRO n 1 282 ALA n 1 283 SER n 1 284 LEU n 1 285 TRP n 1 286 ARG n 1 287 LYS n 1 288 ALA n 1 289 VAL n 1 290 CYS n 1 291 LEU n 1 292 PRO n 1 293 SER n 1 294 ILE n 1 295 LEU n 1 296 TYR n 1 297 ARG n 1 298 LEU n 1 299 HIS n 1 300 CYS n 1 301 LEU n 1 302 LEU n 2 1 G n 2 2 C n 2 3 G n 2 4 U n 2 5 U n 2 6 G n 2 7 G n 2 8 C n 2 9 C n 2 10 A n 2 11 A n 2 12 C n 2 13 G n 2 14 C n 2 15 U n 2 16 U n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'DICER, DICER1, HERNA, KIAA0928' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP DICER_HUMAN Q9UPY3 1 ;DQPCYLYVIGMVLTTPLPDELNFRRRKLYPPEDTTRCFGILTAKPIPQIPHFPVYTRSGEVTISIELKKSGFMLSLQMLE LITRLHQYIFSHILRLEKPALEFKPTDADSAYCVLPLNVVNDSSTLDIDFKFMEDIEKSEARIGIPSTKYTKETPFVFKL EDYQDAVIIPRYRNFDQPHRFYVADVYTDLTPLSKFPSPEYETFAEYYKTKYNLDLTNLNQPLLDVDHTSSRLNLLTPRH LNQKGKALPLSSAEKRKAKWESLQNKQILVPELCAIHPIPASLWRKAVCLPSILYRLHCLL ; 765 ? 2 PDB 4NHA 4NHA 2 GCGUUGGCCAACGCUU 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4NHA A 2 ? 302 ? Q9UPY3 765 ? 1065 ? 755 1055 2 2 4NHA B 1 ? 16 ? 4NHA 1 ? 16 ? 1 16 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4NHA _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9UPY3 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'EXPRESSION TAG' _struct_ref_seq_dif.pdbx_auth_seq_num 754 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight A 'RNA linking' y "ADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 C 'RNA linking' y "CYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O8 P' 323.197 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G 'RNA linking' y "GUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O8 P' 363.221 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 U 'RNA linking' y "URIDINE-5'-MONOPHOSPHATE" ? 'C9 H13 N2 O9 P' 324.181 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4NHA _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.53 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 65.13 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 6.5 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;0.2 M potassium chloride, 0.1 M magnesium acetate, 0.05 M sodium cacodylate, pH 6.5, 12 % PEG8000, VAPOR DIFFUSION, HANGING DROP, temperature 293K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2011-02-11 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97947 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 24-ID-C' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97947 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 24-ID-C # _reflns.entry_id 4NHA _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.d_resolution_high 3.4 _reflns.d_resolution_low 20.0 _reflns.number_all ? _reflns.number_obs 8091 _reflns.percent_possible_obs 99.4 _reflns.pdbx_Rmerge_I_obs 0.069 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 30.4 _reflns.B_iso_Wilson_estimate 107.44 _reflns.pdbx_redundancy 6.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 3.40 _reflns_shell.d_res_low 3.52 _reflns_shell.percent_possible_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.Rmerge_I_obs 0.382 _reflns_shell.meanI_over_sigI_obs 4.280 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_redundancy 6.700 _reflns_shell.number_unique_all 769 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4NHA _refine.ls_d_res_high 3.401 _refine.ls_d_res_low 19.752 _refine.pdbx_ls_sigma_F 1.340 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.97 _refine.ls_number_reflns_obs 8068 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2808 _refine.ls_R_factor_R_work 0.2768 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.3174 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 10.0 _refine.ls_number_reflns_R_free 807 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 142.7845 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.5600 _refine.overall_SU_B ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.pdbx_solvent_vdw_probe_radii 1.1100 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.9000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.6862 _refine.B_iso_max 298.010 _refine.B_iso_min 69.110 _refine.pdbx_overall_phase_error 36.0900 _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1774 _refine_hist.pdbx_number_atoms_nucleic_acid 340 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 2114 _refine_hist.d_res_high 3.401 _refine_hist.d_res_low 19.752 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 2196 0.006 ? ? ? 'X-RAY DIFFRACTION' f_angle_d 3078 1.191 ? ? ? 'X-RAY DIFFRACTION' f_chiral_restr 380 0.086 ? ? ? 'X-RAY DIFFRACTION' f_plane_restr 328 0.005 ? ? ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 820 14.170 ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.percent_reflns_obs _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_R_work _refine_ls_shell.R_factor_R_free _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id 3.401 3.6133 6 97.0 1152 . 0.3344 0.4057 . 128 . 1280 . . 'X-RAY DIFFRACTION' 3.6133 3.8903 6 99.0 1196 . 0.3083 0.3738 . 133 . 1329 . . 'X-RAY DIFFRACTION' 3.8903 4.2782 6 100.0 1205 . 0.2814 0.3251 . 134 . 1339 . . 'X-RAY DIFFRACTION' 4.2782 4.8891 6 99.0 1213 . 0.2530 0.2967 . 134 . 1347 . . 'X-RAY DIFFRACTION' 4.8891 6.1290 6 99.0 1220 . 0.2878 0.3302 . 137 . 1357 . . 'X-RAY DIFFRACTION' 6.1290 19.7525 6 98.0 1275 . 0.2620 0.2854 . 141 . 1416 . . 'X-RAY DIFFRACTION' # _struct.entry_id 4NHA _struct.title ;Structure of human Dicer Platform-PAZ-Connector Helix cassette in complex with 16-mer siRNA having 5'-p and UU-3' ends (3.4 Angstrom resolution) ; _struct.pdbx_descriptor 'Endoribonuclease Dicer (E.C.3.1.26.-)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4NHA _struct_keywords.pdbx_keywords HYDROLASE/RNA _struct_keywords.text 'PAZ domain, platform domain, connector helix, siRNA, RNase III domain, endoribonuclease, pre-miRNA, HYDROLASE-RNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 31 ? THR A 35 ? PRO A 784 THR A 788 5 ? 5 HELX_P HELX_P2 2 SER A 76 ? ILE A 94 ? SER A 829 ILE A 847 1 ? 19 HELX_P HELX_P3 3 ASP A 130 ? GLU A 138 ? ASP A 883 GLU A 891 1 ? 9 HELX_P HELX_P4 4 LEU A 161 ? GLN A 165 ? LEU A 914 GLN A 918 5 ? 5 HELX_P HELX_P5 5 TYR A 173 ? ASN A 175 ? TYR A 926 ASN A 928 5 ? 3 HELX_P HELX_P6 6 THR A 204 ? ASN A 214 ? THR A 957 ASN A 967 1 ? 11 HELX_P HELX_P7 7 VAL A 271 ? GLU A 273 ? VAL A 1024 GLU A 1026 5 ? 3 HELX_P HELX_P8 8 PRO A 281 ? VAL A 289 ? PRO A 1034 VAL A 1042 1 ? 9 HELX_P HELX_P9 9 CYS A 290 ? CYS A 300 ? CYS A 1043 CYS A 1053 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A GLY 11 C ? ? ? 1_555 A MSE 12 N ? ? A GLY 764 A MSE 765 1_555 ? ? ? ? ? ? ? 1.327 ? covale2 covale ? ? A MSE 12 C ? ? ? 1_555 A VAL 13 N ? ? A MSE 765 A VAL 766 1_555 ? ? ? ? ? ? ? 1.330 ? covale3 covale ? ? A PHE 73 C ? ? ? 1_555 A MSE 74 N ? ? A PHE 826 A MSE 827 1_555 ? ? ? ? ? ? ? 1.328 ? covale4 covale ? ? A MSE 74 C ? ? ? 1_555 A LEU 75 N ? ? A MSE 827 A LEU 828 1_555 ? ? ? ? ? ? ? 1.333 ? covale5 covale ? ? A GLN 78 C ? ? ? 1_555 A MSE 79 N ? ? A GLN 831 A MSE 832 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 79 C ? ? ? 1_555 A LEU 80 N ? ? A MSE 832 A LEU 833 1_555 ? ? ? ? ? ? ? 1.327 ? covale7 covale ? ? A PHE 133 C ? ? ? 1_555 A MSE 134 N ? ? A PHE 886 A MSE 887 1_555 ? ? ? ? ? ? ? 1.327 ? covale8 covale ? ? A MSE 134 C ? ? ? 1_555 A GLU 135 N ? ? A MSE 887 A GLU 888 1_555 ? ? ? ? ? ? ? 1.331 ? hydrog1 hydrog ? ? B G 1 O6 ? ? ? 1_555 B C 14 N4 ? ? B G 1 B C 14 15_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog2 hydrog ? ? B C 2 N3 ? ? ? 1_555 B G 13 N1 ? ? B C 2 B G 13 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog3 hydrog ? ? B C 2 N4 ? ? ? 1_555 B G 13 O6 ? ? B C 2 B G 13 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog4 hydrog ? ? B C 2 O2 ? ? ? 1_555 B G 13 N2 ? ? B C 2 B G 13 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog5 hydrog ? ? B G 3 N1 ? ? ? 1_555 B A 11 N1 ? ? B G 3 B A 11 15_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog6 hydrog ? ? B G 3 O6 ? ? ? 1_555 B A 11 N6 ? ? B G 3 B A 11 15_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog7 hydrog ? ? B G 3 N2 ? ? ? 1_555 B C 12 N3 ? ? B G 3 B C 12 15_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog8 hydrog ? ? B U 4 N3 ? ? ? 1_555 B A 11 N1 ? ? B U 4 B A 11 15_555 ? ? ? ? ? ? 'U-A PAIR' ? ? hydrog9 hydrog ? ? B U 5 N3 ? ? ? 1_555 B A 10 N1 ? ? B U 5 B A 10 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog10 hydrog ? ? B U 5 O4 ? ? ? 1_555 B A 10 N6 ? ? B U 5 B A 10 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog11 hydrog ? ? B G 6 N1 ? ? ? 1_555 B C 9 N3 ? ? B G 6 B C 9 15_555 ? ? ? ? ? ? 'G-C PAIR' ? ? hydrog12 hydrog ? ? B C 9 O2 ? ? ? 1_555 B G 6 N2 ? ? B C 9 B G 6 15_555 ? ? ? ? ? ? 'C-G PAIR' ? ? hydrog13 hydrog ? ? B A 10 N1 ? ? ? 1_555 B U 5 N3 ? ? B A 10 B U 5 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog14 hydrog ? ? B A 10 N6 ? ? ? 1_555 B U 5 O4 ? ? B A 10 B U 5 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog15 hydrog ? ? B A 11 N1 ? ? ? 1_555 B G 3 N1 ? ? B A 11 B G 3 15_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog16 hydrog ? ? B A 11 N6 ? ? ? 1_555 B G 3 O6 ? ? B A 11 B G 3 15_555 ? ? ? ? ? ? TYPE_8_PAIR ? ? hydrog17 hydrog ? ? B A 11 N1 ? ? ? 1_555 B U 4 N3 ? ? B A 11 B U 4 15_555 ? ? ? ? ? ? 'A-U PAIR' ? ? hydrog18 hydrog ? ? B C 12 N3 ? ? ? 1_555 B G 3 N2 ? ? B C 12 B G 3 15_555 ? ? ? ? ? ? 'C-G PAIR' ? ? hydrog19 hydrog ? ? B G 13 N1 ? ? ? 1_555 B C 2 N3 ? ? B G 13 B C 2 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog20 hydrog ? ? B G 13 N2 ? ? ? 1_555 B C 2 O2 ? ? B G 13 B C 2 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog21 hydrog ? ? B G 13 O6 ? ? ? 1_555 B C 2 N4 ? ? B G 13 B C 2 15_555 ? ? ? ? ? ? WATSON-CRICK ? ? hydrog22 hydrog ? ? B C 14 N4 ? ? ? 1_555 B G 1 O6 ? ? B C 14 B G 1 15_555 ? ? ? ? ? ? 'C-G PAIR' ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 5 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 55 ? THR A 57 ? VAL A 808 THR A 810 A 2 GLY A 60 ? LEU A 68 ? GLY A 813 LEU A 821 A 3 TYR A 8 ? PRO A 17 ? TYR A 761 PRO A 770 A 4 CYS A 38 ? ILE A 41 ? CYS A 791 ILE A 794 A 5 VAL A 115 ? LEU A 118 ? VAL A 868 LEU A 871 B 1 ILE A 269 ? LEU A 270 ? ILE A 1022 LEU A 1023 B 2 LEU A 224 ? HIS A 229 ? LEU A 977 HIS A 982 B 3 PHE A 182 ? TYR A 188 ? PHE A 935 TYR A 941 B 4 VAL A 168 ? PRO A 171 ? VAL A 921 PRO A 924 B 5 CYS A 275 ? HIS A 278 ? CYS A 1028 HIS A 1031 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 55 ? N VAL A 808 O VAL A 62 ? O VAL A 815 A 2 3 O SER A 65 ? O SER A 818 N GLY A 11 ? N GLY A 764 A 3 4 N ILE A 10 ? N ILE A 763 O PHE A 39 ? O PHE A 792 A 4 5 N GLY A 40 ? N GLY A 793 O LEU A 116 ? O LEU A 869 B 1 2 O LEU A 270 ? O LEU A 1023 N LEU A 225 ? N LEU A 978 B 2 3 O ASP A 226 ? O ASP A 979 N ALA A 185 ? N ALA A 938 B 3 4 O PHE A 182 ? O PHE A 935 N ILE A 169 ? N ILE A 922 B 4 5 N VAL A 168 ? N VAL A 921 O HIS A 278 ? O HIS A 1031 # _atom_sites.entry_id 4NHA _atom_sites.fract_transf_matrix[1][1] 0.005732 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.005732 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013377 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O P S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 754 ? ? ? A . n A 1 2 ASP 2 755 ? ? ? A . n A 1 3 GLN 3 756 ? ? ? A . n A 1 4 PRO 4 757 ? ? ? A . n A 1 5 CYS 5 758 ? ? ? A . n A 1 6 TYR 6 759 ? ? ? A . n A 1 7 LEU 7 760 760 LEU LEU A . n A 1 8 TYR 8 761 761 TYR TYR A . n A 1 9 VAL 9 762 762 VAL VAL A . n A 1 10 ILE 10 763 763 ILE ILE A . n A 1 11 GLY 11 764 764 GLY GLY A . n A 1 12 MSE 12 765 765 MSE MSE A . n A 1 13 VAL 13 766 766 VAL VAL A . n A 1 14 LEU 14 767 767 LEU LEU A . n A 1 15 THR 15 768 768 THR THR A . n A 1 16 THR 16 769 769 THR THR A . n A 1 17 PRO 17 770 770 PRO PRO A . n A 1 18 LEU 18 771 771 LEU LEU A . n A 1 19 PRO 19 772 772 PRO PRO A . n A 1 20 ASP 20 773 773 ASP ASP A . n A 1 21 GLU 21 774 774 GLU GLU A . n A 1 22 LEU 22 775 775 LEU LEU A . n A 1 23 ASN 23 776 ? ? ? A . n A 1 24 PHE 24 777 ? ? ? A . n A 1 25 ARG 25 778 ? ? ? A . n A 1 26 ARG 26 779 ? ? ? A . n A 1 27 ARG 27 780 780 ARG ARG A . n A 1 28 LYS 28 781 781 LYS LYS A . n A 1 29 LEU 29 782 782 LEU LEU A . n A 1 30 TYR 30 783 783 TYR TYR A . n A 1 31 PRO 31 784 784 PRO PRO A . n A 1 32 PRO 32 785 785 PRO PRO A . n A 1 33 GLU 33 786 786 GLU GLU A . n A 1 34 ASP 34 787 787 ASP ASP A . n A 1 35 THR 35 788 788 THR THR A . n A 1 36 THR 36 789 789 THR THR A . n A 1 37 ARG 37 790 790 ARG ARG A . n A 1 38 CYS 38 791 791 CYS CYS A . n A 1 39 PHE 39 792 792 PHE PHE A . n A 1 40 GLY 40 793 793 GLY GLY A . n A 1 41 ILE 41 794 794 ILE ILE A . n A 1 42 LEU 42 795 795 LEU LEU A . n A 1 43 THR 43 796 796 THR THR A . n A 1 44 ALA 44 797 797 ALA ALA A . n A 1 45 LYS 45 798 798 LYS LYS A . n A 1 46 PRO 46 799 799 PRO PRO A . n A 1 47 ILE 47 800 800 ILE ILE A . n A 1 48 PRO 48 801 801 PRO PRO A . n A 1 49 GLN 49 802 802 GLN GLN A . n A 1 50 ILE 50 803 803 ILE ILE A . n A 1 51 PRO 51 804 ? ? ? A . n A 1 52 HIS 52 805 ? ? ? A . n A 1 53 PHE 53 806 ? ? ? A . n A 1 54 PRO 54 807 807 PRO PRO A . n A 1 55 VAL 55 808 808 VAL VAL A . n A 1 56 TYR 56 809 809 TYR TYR A . n A 1 57 THR 57 810 810 THR THR A . n A 1 58 ARG 58 811 811 ARG ARG A . n A 1 59 SER 59 812 812 SER SER A . n A 1 60 GLY 60 813 813 GLY GLY A . n A 1 61 GLU 61 814 814 GLU GLU A . n A 1 62 VAL 62 815 815 VAL VAL A . n A 1 63 THR 63 816 816 THR THR A . n A 1 64 ILE 64 817 817 ILE ILE A . n A 1 65 SER 65 818 818 SER SER A . n A 1 66 ILE 66 819 819 ILE ILE A . n A 1 67 GLU 67 820 820 GLU GLU A . n A 1 68 LEU 68 821 821 LEU LEU A . n A 1 69 LYS 69 822 822 LYS LYS A . n A 1 70 LYS 70 823 823 LYS LYS A . n A 1 71 SER 71 824 824 SER SER A . n A 1 72 GLY 72 825 825 GLY GLY A . n A 1 73 PHE 73 826 826 PHE PHE A . n A 1 74 MSE 74 827 827 MSE MSE A . n A 1 75 LEU 75 828 828 LEU LEU A . n A 1 76 SER 76 829 829 SER SER A . n A 1 77 LEU 77 830 830 LEU LEU A . n A 1 78 GLN 78 831 831 GLN GLN A . n A 1 79 MSE 79 832 832 MSE MSE A . n A 1 80 LEU 80 833 833 LEU LEU A . n A 1 81 GLU 81 834 834 GLU GLU A . n A 1 82 LEU 82 835 835 LEU LEU A . n A 1 83 ILE 83 836 836 ILE ILE A . n A 1 84 THR 84 837 837 THR THR A . n A 1 85 ARG 85 838 838 ARG ARG A . n A 1 86 LEU 86 839 839 LEU LEU A . n A 1 87 HIS 87 840 840 HIS HIS A . n A 1 88 GLN 88 841 841 GLN GLN A . n A 1 89 TYR 89 842 842 TYR TYR A . n A 1 90 ILE 90 843 843 ILE ILE A . n A 1 91 PHE 91 844 844 PHE PHE A . n A 1 92 SER 92 845 845 SER SER A . n A 1 93 HIS 93 846 846 HIS HIS A . n A 1 94 ILE 94 847 847 ILE ILE A . n A 1 95 LEU 95 848 848 LEU LEU A . n A 1 96 ARG 96 849 849 ARG ARG A . n A 1 97 LEU 97 850 850 LEU LEU A . n A 1 98 GLU 98 851 ? ? ? A . n A 1 99 LYS 99 852 ? ? ? A . n A 1 100 PRO 100 853 ? ? ? A . n A 1 101 ALA 101 854 ? ? ? A . n A 1 102 LEU 102 855 ? ? ? A . n A 1 103 GLU 103 856 ? ? ? A . n A 1 104 PHE 104 857 ? ? ? A . n A 1 105 LYS 105 858 ? ? ? A . n A 1 106 PRO 106 859 ? ? ? A . n A 1 107 THR 107 860 ? ? ? A . n A 1 108 ASP 108 861 ? ? ? A . n A 1 109 ALA 109 862 ? ? ? A . n A 1 110 ASP 110 863 ? ? ? A . n A 1 111 SER 111 864 864 SER SER A . n A 1 112 ALA 112 865 865 ALA ALA A . n A 1 113 TYR 113 866 866 TYR TYR A . n A 1 114 CYS 114 867 867 CYS CYS A . n A 1 115 VAL 115 868 868 VAL VAL A . n A 1 116 LEU 116 869 869 LEU LEU A . n A 1 117 PRO 117 870 870 PRO PRO A . n A 1 118 LEU 118 871 871 LEU LEU A . n A 1 119 ASN 119 872 872 ASN ASN A . n A 1 120 VAL 120 873 873 VAL VAL A . n A 1 121 VAL 121 874 ? ? ? A . n A 1 122 ASN 122 875 ? ? ? A . n A 1 123 ASP 123 876 ? ? ? A . n A 1 124 SER 124 877 ? ? ? A . n A 1 125 SER 125 878 ? ? ? A . n A 1 126 THR 126 879 879 THR THR A . n A 1 127 LEU 127 880 880 LEU LEU A . n A 1 128 ASP 128 881 881 ASP ASP A . n A 1 129 ILE 129 882 882 ILE ILE A . n A 1 130 ASP 130 883 883 ASP ASP A . n A 1 131 PHE 131 884 884 PHE PHE A . n A 1 132 LYS 132 885 885 LYS LYS A . n A 1 133 PHE 133 886 886 PHE PHE A . n A 1 134 MSE 134 887 887 MSE MSE A . n A 1 135 GLU 135 888 888 GLU GLU A . n A 1 136 ASP 136 889 889 ASP ASP A . n A 1 137 ILE 137 890 890 ILE ILE A . n A 1 138 GLU 138 891 891 GLU GLU A . n A 1 139 LYS 139 892 892 LYS LYS A . n A 1 140 SER 140 893 893 SER SER A . n A 1 141 GLU 141 894 ? ? ? A . n A 1 142 ALA 142 895 ? ? ? A . n A 1 143 ARG 143 896 ? ? ? A . n A 1 144 ILE 144 897 ? ? ? A . n A 1 145 GLY 145 898 ? ? ? A . n A 1 146 ILE 146 899 ? ? ? A . n A 1 147 PRO 147 900 ? ? ? A . n A 1 148 SER 148 901 ? ? ? A . n A 1 149 THR 149 902 902 THR THR A . n A 1 150 LYS 150 903 903 LYS LYS A . n A 1 151 TYR 151 904 904 TYR TYR A . n A 1 152 THR 152 905 905 THR THR A . n A 1 153 LYS 153 906 906 LYS LYS A . n A 1 154 GLU 154 907 907 GLU GLU A . n A 1 155 THR 155 908 908 THR THR A . n A 1 156 PRO 156 909 909 PRO PRO A . n A 1 157 PHE 157 910 910 PHE PHE A . n A 1 158 VAL 158 911 911 VAL VAL A . n A 1 159 PHE 159 912 912 PHE PHE A . n A 1 160 LYS 160 913 913 LYS LYS A . n A 1 161 LEU 161 914 914 LEU LEU A . n A 1 162 GLU 162 915 915 GLU GLU A . n A 1 163 ASP 163 916 916 ASP ASP A . n A 1 164 TYR 164 917 917 TYR TYR A . n A 1 165 GLN 165 918 918 GLN GLN A . n A 1 166 ASP 166 919 919 ASP ASP A . n A 1 167 ALA 167 920 920 ALA ALA A . n A 1 168 VAL 168 921 921 VAL VAL A . n A 1 169 ILE 169 922 922 ILE ILE A . n A 1 170 ILE 170 923 923 ILE ILE A . n A 1 171 PRO 171 924 924 PRO PRO A . n A 1 172 ARG 172 925 925 ARG ARG A . n A 1 173 TYR 173 926 926 TYR TYR A . n A 1 174 ARG 174 927 927 ARG ARG A . n A 1 175 ASN 175 928 928 ASN ASN A . n A 1 176 PHE 176 929 929 PHE PHE A . n A 1 177 ASP 177 930 930 ASP ASP A . n A 1 178 GLN 178 931 931 GLN GLN A . n A 1 179 PRO 179 932 932 PRO PRO A . n A 1 180 HIS 180 933 933 HIS HIS A . n A 1 181 ARG 181 934 934 ARG ARG A . n A 1 182 PHE 182 935 935 PHE PHE A . n A 1 183 TYR 183 936 936 TYR TYR A . n A 1 184 VAL 184 937 937 VAL VAL A . n A 1 185 ALA 185 938 938 ALA ALA A . n A 1 186 ASP 186 939 939 ASP ASP A . n A 1 187 VAL 187 940 940 VAL VAL A . n A 1 188 TYR 188 941 941 TYR TYR A . n A 1 189 THR 189 942 942 THR THR A . n A 1 190 ASP 190 943 943 ASP ASP A . n A 1 191 LEU 191 944 944 LEU LEU A . n A 1 192 THR 192 945 945 THR THR A . n A 1 193 PRO 193 946 946 PRO PRO A . n A 1 194 LEU 194 947 947 LEU LEU A . n A 1 195 SER 195 948 948 SER SER A . n A 1 196 LYS 196 949 949 LYS LYS A . n A 1 197 PHE 197 950 950 PHE PHE A . n A 1 198 PRO 198 951 951 PRO PRO A . n A 1 199 SER 199 952 952 SER SER A . n A 1 200 PRO 200 953 953 PRO PRO A . n A 1 201 GLU 201 954 954 GLU GLU A . n A 1 202 TYR 202 955 955 TYR TYR A . n A 1 203 GLU 203 956 956 GLU GLU A . n A 1 204 THR 204 957 957 THR THR A . n A 1 205 PHE 205 958 958 PHE PHE A . n A 1 206 ALA 206 959 959 ALA ALA A . n A 1 207 GLU 207 960 960 GLU GLU A . n A 1 208 TYR 208 961 961 TYR TYR A . n A 1 209 TYR 209 962 962 TYR TYR A . n A 1 210 LYS 210 963 963 LYS LYS A . n A 1 211 THR 211 964 964 THR THR A . n A 1 212 LYS 212 965 965 LYS LYS A . n A 1 213 TYR 213 966 966 TYR TYR A . n A 1 214 ASN 214 967 967 ASN ASN A . n A 1 215 LEU 215 968 968 LEU LEU A . n A 1 216 ASP 216 969 969 ASP ASP A . n A 1 217 LEU 217 970 970 LEU LEU A . n A 1 218 THR 218 971 971 THR THR A . n A 1 219 ASN 219 972 972 ASN ASN A . n A 1 220 LEU 220 973 973 LEU LEU A . n A 1 221 ASN 221 974 974 ASN ASN A . n A 1 222 GLN 222 975 975 GLN GLN A . n A 1 223 PRO 223 976 976 PRO PRO A . n A 1 224 LEU 224 977 977 LEU LEU A . n A 1 225 LEU 225 978 978 LEU LEU A . n A 1 226 ASP 226 979 979 ASP ASP A . n A 1 227 VAL 227 980 980 VAL VAL A . n A 1 228 ASP 228 981 981 ASP ASP A . n A 1 229 HIS 229 982 982 HIS HIS A . n A 1 230 THR 230 983 983 THR THR A . n A 1 231 SER 231 984 984 SER SER A . n A 1 232 SER 232 985 985 SER SER A . n A 1 233 ARG 233 986 986 ARG ARG A . n A 1 234 LEU 234 987 987 LEU LEU A . n A 1 235 ASN 235 988 988 ASN ASN A . n A 1 236 LEU 236 989 989 LEU LEU A . n A 1 237 LEU 237 990 990 LEU LEU A . n A 1 238 THR 238 991 991 THR THR A . n A 1 239 PRO 239 992 992 PRO PRO A . n A 1 240 ARG 240 993 ? ? ? A . n A 1 241 HIS 241 994 ? ? ? A . n A 1 242 LEU 242 995 ? ? ? A . n A 1 243 ASN 243 996 ? ? ? A . n A 1 244 GLN 244 997 ? ? ? A . n A 1 245 LYS 245 998 ? ? ? A . n A 1 246 GLY 246 999 ? ? ? A . n A 1 247 LYS 247 1000 ? ? ? A . n A 1 248 ALA 248 1001 ? ? ? A . n A 1 249 LEU 249 1002 ? ? ? A . n A 1 250 PRO 250 1003 ? ? ? A . n A 1 251 LEU 251 1004 ? ? ? A . n A 1 252 SER 252 1005 ? ? ? A . n A 1 253 SER 253 1006 ? ? ? A . n A 1 254 ALA 254 1007 ? ? ? A . n A 1 255 GLU 255 1008 ? ? ? A . n A 1 256 LYS 256 1009 ? ? ? A . n A 1 257 ARG 257 1010 ? ? ? A . n A 1 258 LYS 258 1011 ? ? ? A . n A 1 259 ALA 259 1012 ? ? ? A . n A 1 260 LYS 260 1013 ? ? ? A . n A 1 261 TRP 261 1014 ? ? ? A . n A 1 262 GLU 262 1015 ? ? ? A . n A 1 263 SER 263 1016 ? ? ? A . n A 1 264 LEU 264 1017 ? ? ? A . n A 1 265 GLN 265 1018 ? ? ? A . n A 1 266 ASN 266 1019 ? ? ? A . n A 1 267 LYS 267 1020 1020 LYS LYS A . n A 1 268 GLN 268 1021 1021 GLN GLN A . n A 1 269 ILE 269 1022 1022 ILE ILE A . n A 1 270 LEU 270 1023 1023 LEU LEU A . n A 1 271 VAL 271 1024 1024 VAL VAL A . n A 1 272 PRO 272 1025 1025 PRO PRO A . n A 1 273 GLU 273 1026 1026 GLU GLU A . n A 1 274 LEU 274 1027 1027 LEU LEU A . n A 1 275 CYS 275 1028 1028 CYS CYS A . n A 1 276 ALA 276 1029 1029 ALA ALA A . n A 1 277 ILE 277 1030 1030 ILE ILE A . n A 1 278 HIS 278 1031 1031 HIS HIS A . n A 1 279 PRO 279 1032 1032 PRO PRO A . n A 1 280 ILE 280 1033 1033 ILE ILE A . n A 1 281 PRO 281 1034 1034 PRO PRO A . n A 1 282 ALA 282 1035 1035 ALA ALA A . n A 1 283 SER 283 1036 1036 SER SER A . n A 1 284 LEU 284 1037 1037 LEU LEU A . n A 1 285 TRP 285 1038 1038 TRP TRP A . n A 1 286 ARG 286 1039 1039 ARG ARG A . n A 1 287 LYS 287 1040 1040 LYS LYS A . n A 1 288 ALA 288 1041 1041 ALA ALA A . n A 1 289 VAL 289 1042 1042 VAL VAL A . n A 1 290 CYS 290 1043 1043 CYS CYS A . n A 1 291 LEU 291 1044 1044 LEU LEU A . n A 1 292 PRO 292 1045 1045 PRO PRO A . n A 1 293 SER 293 1046 1046 SER SER A . n A 1 294 ILE 294 1047 1047 ILE ILE A . n A 1 295 LEU 295 1048 1048 LEU LEU A . n A 1 296 TYR 296 1049 1049 TYR TYR A . n A 1 297 ARG 297 1050 1050 ARG ARG A . n A 1 298 LEU 298 1051 1051 LEU LEU A . n A 1 299 HIS 299 1052 1052 HIS HIS A . n A 1 300 CYS 300 1053 1053 CYS CYS A . n A 1 301 LEU 301 1054 ? ? ? A . n A 1 302 LEU 302 1055 ? ? ? A . n B 2 1 G 1 1 1 G G B . n B 2 2 C 2 2 2 C C B . n B 2 3 G 3 3 3 G G B . n B 2 4 U 4 4 4 U U B . n B 2 5 U 5 5 5 U U B . n B 2 6 G 6 6 6 G G B . n B 2 7 G 7 7 7 G G B . n B 2 8 C 8 8 8 C C B . n B 2 9 C 9 9 9 C C B . n B 2 10 A 10 10 10 A A B . n B 2 11 A 11 11 11 A A B . n B 2 12 C 12 12 12 C C B . n B 2 13 G 13 13 13 G G B . n B 2 14 C 14 14 14 C C B . n B 2 15 U 15 15 15 U U B . n B 2 16 U 16 16 16 U U B . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 12 A MSE 765 ? MET SELENOMETHIONINE 2 A MSE 74 A MSE 827 ? MET SELENOMETHIONINE 3 A MSE 79 A MSE 832 ? MET SELENOMETHIONINE 4 A MSE 134 A MSE 887 ? MET SELENOMETHIONINE # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? trimeric 3 2 software_defined_assembly PISA tetrameric 4 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 B 1 2 A,B 2 2,1 A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3320 ? 2 MORE -17 ? 2 'SSA (A^2)' 30440 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'crystal symmetry operation' 15_555 y,x,-z 0.0000000000 1.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 2 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2014-03-05 2 'Structure model' 1 1 2014-03-12 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2018-01-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' audit_author # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.classification' 2 3 'Structure model' '_software.contact_author' 3 3 'Structure model' '_software.contact_author_email' 4 3 'Structure model' '_software.date' 5 3 'Structure model' '_software.language' 6 3 'Structure model' '_software.location' 7 3 'Structure model' '_software.name' 8 3 'Structure model' '_software.type' 9 3 'Structure model' '_software.version' 10 4 'Structure model' '_audit_author.name' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 3.400 _diffrn_reflns.pdbx_d_res_low 20.000 _diffrn_reflns.pdbx_number_obs 14941 _diffrn_reflns.pdbx_Rmerge_I_obs 0.063 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared 1.12 _diffrn_reflns.av_sigmaI_over_netI ? _diffrn_reflns.pdbx_redundancy 3.70 _diffrn_reflns.pdbx_percent_possible_obs 99.20 _diffrn_reflns.number 55198 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 7.22 20.00 ? ? 0.034 ? 1.683 3.80 99.10 1 5.78 7.22 ? ? 0.054 ? 1.254 3.70 99.50 1 5.06 5.78 ? ? 0.066 ? 1.222 3.80 99.50 1 4.60 5.06 ? ? 0.074 ? 1.244 3.80 99.70 1 4.28 4.60 ? ? 0.085 ? 1.188 3.80 99.80 1 4.03 4.28 ? ? 0.115 ? 1.056 3.70 99.90 1 3.83 4.03 ? ? 0.155 ? 0.972 3.60 99.80 1 3.66 3.83 ? ? 0.212 ? 0.902 3.60 99.30 1 3.52 3.66 ? ? 0.295 ? 0.793 3.50 98.20 1 3.40 3.52 ? ? 0.355 ? 0.829 3.50 97.60 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined -18.3337 3.6916 -25.1738 1.0330 3.1681 0.6140 0.1861 -0.2011 -0.1501 1.2696 3.5777 4.6572 -1.7719 -1.4819 0.3756 0.2943 -0.5712 0.4097 2.5816 -0.8902 0.5892 0.1076 -0.2489 0.0233 'X-RAY DIFFRACTION' 2 ? refined -14.6676 16.8506 -18.1442 0.9569 2.7933 0.9733 -0.2270 0.0899 0.3459 5.7040 7.7072 7.3617 -6.4550 6.4540 -7.1070 -1.3392 0.9128 0.2755 2.8244 0.5239 -0.2006 1.9699 -2.0561 0.7307 'X-RAY DIFFRACTION' 3 ? refined -36.8875 21.9062 0.1499 0.9141 1.2257 1.7625 -0.0373 -0.0064 0.2380 5.1354 1.6725 6.5423 2.5219 2.8252 2.8624 0.3172 -2.1032 1.2838 -0.4300 0.1089 -1.2358 0.0397 -1.0855 -1.0363 'X-RAY DIFFRACTION' 4 ? refined -33.9165 7.6871 2.1139 0.8615 1.2674 0.8403 -0.1367 0.2224 -0.0037 2.5877 9.2295 8.1145 -2.1051 2.0758 1.0924 -0.1602 0.0144 0.0644 -0.1492 0.1023 0.6923 1.3021 0.6257 -1.2926 'X-RAY DIFFRACTION' 5 ? refined -14.5550 -6.1015 -14.3476 1.4859 2.8305 0.7592 -0.0420 -0.7394 -0.1796 5.5539 1.3769 1.7812 1.4691 1.2281 0.1249 0.8683 -0.0524 -0.8912 0.5141 -1.2025 0.0371 -0.3221 0.3081 0.1753 'X-RAY DIFFRACTION' 6 ? refined -19.8512 -14.4582 2.5731 1.6897 1.6788 1.8133 -0.1252 -0.2584 0.4349 8.8751 8.8071 1.2339 -8.9599 -3.3200 3.0990 -0.3529 0.4360 -0.0520 -1.0903 -2.5478 1.4978 0.8491 1.1644 -0.6673 'X-RAY DIFFRACTION' 7 ? refined -21.5019 6.2432 -11.7029 0.2544 2.7277 0.3913 -0.3265 0.2995 0.2705 4.1291 3.5494 4.7590 -0.1516 -1.4078 0.4566 0.2202 -0.0742 0.1409 1.3622 0.1569 0.4998 -0.3387 0.3757 1.7422 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 760 A 829 'chain A and ( resseq 760:829 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 830 A 891 'chain A and ( resseq 830:891 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 892 A 913 'chain A and ( resseq 892:913 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 914 A 984 'chain A and ( resseq 914:984 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 985 A 992 'chain A and ( resseq 985:992 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 1 B 16 'chain B and ( resseq 1:16 )' ? ? ? ? ? 'X-RAY DIFFRACTION' 7 7 A 1021 A 1053 'chain A and ( resseq 1021:1053 )' ? ? ? ? ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 DENZO . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data reduction' http://www.hkl-xray.com/ ? ? 2 SCALEPACK . ? package 'Zbyszek Otwinowski' hkl@hkl-xray.com 'data scaling' http://www.hkl-xray.com/ ? ? 3 PHENIX 1.8.2_1309 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 6 SHARP . ? ? ? ? phasing ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 P _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 G _pdbx_validate_rmsd_bond.auth_seq_id_1 1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 OP3 _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 G _pdbx_validate_rmsd_bond.auth_seq_id_2 1 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.480 _pdbx_validate_rmsd_bond.bond_target_value 1.607 _pdbx_validate_rmsd_bond.bond_deviation -0.127 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 LYS A 781 ? ? 50.88 -145.82 2 1 THR A 796 ? ? -75.39 -165.99 3 1 ALA A 797 ? ? 85.84 0.33 4 1 LYS A 822 ? ? -120.76 -59.83 5 1 ALA A 865 ? ? 177.76 179.21 6 1 TYR A 866 ? ? -72.23 -166.70 7 1 ASP A 881 ? ? 58.15 -142.02 8 1 ARG A 927 ? ? -150.50 59.26 9 1 GLN A 931 ? ? 46.58 77.63 10 1 LEU A 1051 ? ? -141.80 -60.29 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A THR 768 ? OG1 ? A THR 15 OG1 2 1 Y 1 A THR 768 ? CG2 ? A THR 15 CG2 3 1 Y 1 A THR 769 ? OG1 ? A THR 16 OG1 4 1 Y 1 A THR 769 ? CG2 ? A THR 16 CG2 5 1 Y 1 A LEU 771 ? CG ? A LEU 18 CG 6 1 Y 1 A LEU 771 ? CD1 ? A LEU 18 CD1 7 1 Y 1 A LEU 771 ? CD2 ? A LEU 18 CD2 8 1 Y 1 A ASP 773 ? CG ? A ASP 20 CG 9 1 Y 1 A ASP 773 ? OD1 ? A ASP 20 OD1 10 1 Y 1 A ASP 773 ? OD2 ? A ASP 20 OD2 11 1 Y 1 A GLU 774 ? CG ? A GLU 21 CG 12 1 Y 1 A GLU 774 ? CD ? A GLU 21 CD 13 1 Y 1 A GLU 774 ? OE1 ? A GLU 21 OE1 14 1 Y 1 A GLU 774 ? OE2 ? A GLU 21 OE2 15 1 Y 1 A LEU 775 ? CG ? A LEU 22 CG 16 1 Y 1 A LEU 775 ? CD1 ? A LEU 22 CD1 17 1 Y 1 A LEU 775 ? CD2 ? A LEU 22 CD2 18 1 Y 1 A LYS 781 ? CG ? A LYS 28 CG 19 1 Y 1 A LYS 781 ? CD ? A LYS 28 CD 20 1 Y 1 A LYS 781 ? CE ? A LYS 28 CE 21 1 Y 1 A LYS 781 ? NZ ? A LYS 28 NZ 22 1 Y 1 A TYR 783 ? CG ? A TYR 30 CG 23 1 Y 1 A TYR 783 ? CD1 ? A TYR 30 CD1 24 1 Y 1 A TYR 783 ? CD2 ? A TYR 30 CD2 25 1 Y 1 A TYR 783 ? CE1 ? A TYR 30 CE1 26 1 Y 1 A TYR 783 ? CE2 ? A TYR 30 CE2 27 1 Y 1 A TYR 783 ? CZ ? A TYR 30 CZ 28 1 Y 1 A TYR 783 ? OH ? A TYR 30 OH 29 1 Y 1 A ILE 800 ? CG1 ? A ILE 47 CG1 30 1 Y 1 A ILE 800 ? CG2 ? A ILE 47 CG2 31 1 Y 1 A ILE 800 ? CD1 ? A ILE 47 CD1 32 1 Y 1 A ILE 803 ? CG1 ? A ILE 50 CG1 33 1 Y 1 A ILE 803 ? CG2 ? A ILE 50 CG2 34 1 Y 1 A ILE 803 ? CD1 ? A ILE 50 CD1 35 1 Y 1 A VAL 815 ? CG1 ? A VAL 62 CG1 36 1 Y 1 A VAL 815 ? CG2 ? A VAL 62 CG2 37 1 Y 1 A SER 818 ? OG ? A SER 65 OG 38 1 Y 1 A GLU 820 ? CG ? A GLU 67 CG 39 1 Y 1 A GLU 820 ? CD ? A GLU 67 CD 40 1 Y 1 A GLU 820 ? OE1 ? A GLU 67 OE1 41 1 Y 1 A GLU 820 ? OE2 ? A GLU 67 OE2 42 1 Y 1 A LYS 822 ? CG ? A LYS 69 CG 43 1 Y 1 A LYS 822 ? CD ? A LYS 69 CD 44 1 Y 1 A LYS 822 ? CE ? A LYS 69 CE 45 1 Y 1 A LYS 822 ? NZ ? A LYS 69 NZ 46 1 Y 1 A LYS 823 ? CG ? A LYS 70 CG 47 1 Y 1 A LYS 823 ? CD ? A LYS 70 CD 48 1 Y 1 A LYS 823 ? CE ? A LYS 70 CE 49 1 Y 1 A LYS 823 ? NZ ? A LYS 70 NZ 50 1 Y 1 A PHE 826 ? CG ? A PHE 73 CG 51 1 Y 1 A PHE 826 ? CD1 ? A PHE 73 CD1 52 1 Y 1 A PHE 826 ? CD2 ? A PHE 73 CD2 53 1 Y 1 A PHE 826 ? CE1 ? A PHE 73 CE1 54 1 Y 1 A PHE 826 ? CE2 ? A PHE 73 CE2 55 1 Y 1 A PHE 826 ? CZ ? A PHE 73 CZ 56 1 Y 1 A MSE 827 ? CG ? A MSE 74 CG 57 1 Y 1 A MSE 827 ? SE ? A MSE 74 SE 58 1 Y 1 A MSE 827 ? CE ? A MSE 74 CE 59 1 Y 1 A LEU 830 ? CG ? A LEU 77 CG 60 1 Y 1 A LEU 830 ? CD1 ? A LEU 77 CD1 61 1 Y 1 A LEU 830 ? CD2 ? A LEU 77 CD2 62 1 Y 1 A GLN 831 ? CG ? A GLN 78 CG 63 1 Y 1 A GLN 831 ? CD ? A GLN 78 CD 64 1 Y 1 A GLN 831 ? OE1 ? A GLN 78 OE1 65 1 Y 1 A GLN 831 ? NE2 ? A GLN 78 NE2 66 1 Y 1 A MSE 832 ? CG ? A MSE 79 CG 67 1 Y 1 A MSE 832 ? SE ? A MSE 79 SE 68 1 Y 1 A MSE 832 ? CE ? A MSE 79 CE 69 1 Y 1 A GLU 834 ? CG ? A GLU 81 CG 70 1 Y 1 A GLU 834 ? CD ? A GLU 81 CD 71 1 Y 1 A GLU 834 ? OE1 ? A GLU 81 OE1 72 1 Y 1 A GLU 834 ? OE2 ? A GLU 81 OE2 73 1 Y 1 A SER 864 ? OG ? A SER 111 OG 74 1 Y 1 A LEU 869 ? CG ? A LEU 116 CG 75 1 Y 1 A LEU 869 ? CD1 ? A LEU 116 CD1 76 1 Y 1 A LEU 869 ? CD2 ? A LEU 116 CD2 77 1 Y 1 A LYS 892 ? CG ? A LYS 139 CG 78 1 Y 1 A LYS 892 ? CD ? A LYS 139 CD 79 1 Y 1 A LYS 892 ? CE ? A LYS 139 CE 80 1 Y 1 A LYS 892 ? NZ ? A LYS 139 NZ 81 1 Y 1 A THR 902 ? OG1 ? A THR 149 OG1 82 1 Y 1 A THR 902 ? CG2 ? A THR 149 CG2 83 1 Y 1 A LYS 903 ? CG ? A LYS 150 CG 84 1 Y 1 A LYS 903 ? CD ? A LYS 150 CD 85 1 Y 1 A LYS 903 ? CE ? A LYS 150 CE 86 1 Y 1 A LYS 903 ? NZ ? A LYS 150 NZ 87 1 Y 1 A THR 905 ? OG1 ? A THR 152 OG1 88 1 Y 1 A THR 905 ? CG2 ? A THR 152 CG2 89 1 Y 1 A LYS 906 ? CG ? A LYS 153 CG 90 1 Y 1 A LYS 906 ? CD ? A LYS 153 CD 91 1 Y 1 A LYS 906 ? CE ? A LYS 153 CE 92 1 Y 1 A LYS 906 ? NZ ? A LYS 153 NZ 93 1 Y 1 A GLU 907 ? CG ? A GLU 154 CG 94 1 Y 1 A GLU 907 ? CD ? A GLU 154 CD 95 1 Y 1 A GLU 907 ? OE1 ? A GLU 154 OE1 96 1 Y 1 A GLU 907 ? OE2 ? A GLU 154 OE2 97 1 Y 1 A LYS 913 ? CG ? A LYS 160 CG 98 1 Y 1 A LYS 913 ? CD ? A LYS 160 CD 99 1 Y 1 A LYS 913 ? CE ? A LYS 160 CE 100 1 Y 1 A LYS 913 ? NZ ? A LYS 160 NZ 101 1 Y 1 A ASP 930 ? CG ? A ASP 177 CG 102 1 Y 1 A ASP 930 ? OD1 ? A ASP 177 OD1 103 1 Y 1 A ASP 930 ? OD2 ? A ASP 177 OD2 104 1 Y 1 A ASP 943 ? CG ? A ASP 190 CG 105 1 Y 1 A ASP 943 ? OD1 ? A ASP 190 OD1 106 1 Y 1 A ASP 943 ? OD2 ? A ASP 190 OD2 107 1 Y 1 A LYS 949 ? CG ? A LYS 196 CG 108 1 Y 1 A LYS 949 ? CD ? A LYS 196 CD 109 1 Y 1 A LYS 949 ? CE ? A LYS 196 CE 110 1 Y 1 A LYS 949 ? NZ ? A LYS 196 NZ 111 1 Y 1 A GLU 956 ? CG ? A GLU 203 CG 112 1 Y 1 A GLU 956 ? CD ? A GLU 203 CD 113 1 Y 1 A GLU 956 ? OE1 ? A GLU 203 OE1 114 1 Y 1 A GLU 956 ? OE2 ? A GLU 203 OE2 115 1 Y 1 A ASP 979 ? CG ? A ASP 226 CG 116 1 Y 1 A ASP 979 ? OD1 ? A ASP 226 OD1 117 1 Y 1 A ASP 979 ? OD2 ? A ASP 226 OD2 118 1 Y 1 A ASP 981 ? CG ? A ASP 228 CG 119 1 Y 1 A ASP 981 ? OD1 ? A ASP 228 OD1 120 1 Y 1 A ASP 981 ? OD2 ? A ASP 228 OD2 121 1 Y 1 A ARG 986 ? CG ? A ARG 233 CG 122 1 Y 1 A ARG 986 ? CD ? A ARG 233 CD 123 1 Y 1 A ARG 986 ? NE ? A ARG 233 NE 124 1 Y 1 A ARG 986 ? CZ ? A ARG 233 CZ 125 1 Y 1 A ARG 986 ? NH1 ? A ARG 233 NH1 126 1 Y 1 A ARG 986 ? NH2 ? A ARG 233 NH2 127 1 Y 1 A ASN 988 ? CG ? A ASN 235 CG 128 1 Y 1 A ASN 988 ? OD1 ? A ASN 235 OD1 129 1 Y 1 A ASN 988 ? ND2 ? A ASN 235 ND2 130 1 Y 1 A LEU 989 ? CG ? A LEU 236 CG 131 1 Y 1 A LEU 989 ? CD1 ? A LEU 236 CD1 132 1 Y 1 A LEU 989 ? CD2 ? A LEU 236 CD2 133 1 Y 1 A ARG 1039 ? CG ? A ARG 286 CG 134 1 Y 1 A ARG 1039 ? CD ? A ARG 286 CD 135 1 Y 1 A ARG 1039 ? NE ? A ARG 286 NE 136 1 Y 1 A ARG 1039 ? CZ ? A ARG 286 CZ 137 1 Y 1 A ARG 1039 ? NH1 ? A ARG 286 NH1 138 1 Y 1 A ARG 1039 ? NH2 ? A ARG 286 NH2 139 1 Y 1 A SER 1046 ? OG ? A SER 293 OG 140 1 Y 1 A LEU 1051 ? CG ? A LEU 298 CG 141 1 Y 1 A LEU 1051 ? CD1 ? A LEU 298 CD1 142 1 Y 1 A LEU 1051 ? CD2 ? A LEU 298 CD2 143 1 Y 1 A HIS 1052 ? CG ? A HIS 299 CG 144 1 Y 1 A HIS 1052 ? ND1 ? A HIS 299 ND1 145 1 Y 1 A HIS 1052 ? CD2 ? A HIS 299 CD2 146 1 Y 1 A HIS 1052 ? CE1 ? A HIS 299 CE1 147 1 Y 1 A HIS 1052 ? NE2 ? A HIS 299 NE2 148 1 Y 1 A CYS 1053 ? SG ? A CYS 300 SG # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 754 ? A SER 1 2 1 Y 1 A ASP 755 ? A ASP 2 3 1 Y 1 A GLN 756 ? A GLN 3 4 1 Y 1 A PRO 757 ? A PRO 4 5 1 Y 1 A CYS 758 ? A CYS 5 6 1 Y 1 A TYR 759 ? A TYR 6 7 1 Y 1 A ASN 776 ? A ASN 23 8 1 Y 1 A PHE 777 ? A PHE 24 9 1 Y 1 A ARG 778 ? A ARG 25 10 1 Y 1 A ARG 779 ? A ARG 26 11 1 Y 1 A PRO 804 ? A PRO 51 12 1 Y 1 A HIS 805 ? A HIS 52 13 1 Y 1 A PHE 806 ? A PHE 53 14 1 Y 1 A GLU 851 ? A GLU 98 15 1 Y 1 A LYS 852 ? A LYS 99 16 1 Y 1 A PRO 853 ? A PRO 100 17 1 Y 1 A ALA 854 ? A ALA 101 18 1 Y 1 A LEU 855 ? A LEU 102 19 1 Y 1 A GLU 856 ? A GLU 103 20 1 Y 1 A PHE 857 ? A PHE 104 21 1 Y 1 A LYS 858 ? A LYS 105 22 1 Y 1 A PRO 859 ? A PRO 106 23 1 Y 1 A THR 860 ? A THR 107 24 1 Y 1 A ASP 861 ? A ASP 108 25 1 Y 1 A ALA 862 ? A ALA 109 26 1 Y 1 A ASP 863 ? A ASP 110 27 1 Y 1 A VAL 874 ? A VAL 121 28 1 Y 1 A ASN 875 ? A ASN 122 29 1 Y 1 A ASP 876 ? A ASP 123 30 1 Y 1 A SER 877 ? A SER 124 31 1 Y 1 A SER 878 ? A SER 125 32 1 Y 1 A GLU 894 ? A GLU 141 33 1 Y 1 A ALA 895 ? A ALA 142 34 1 Y 1 A ARG 896 ? A ARG 143 35 1 Y 1 A ILE 897 ? A ILE 144 36 1 Y 1 A GLY 898 ? A GLY 145 37 1 Y 1 A ILE 899 ? A ILE 146 38 1 Y 1 A PRO 900 ? A PRO 147 39 1 Y 1 A SER 901 ? A SER 148 40 1 Y 1 A ARG 993 ? A ARG 240 41 1 Y 1 A HIS 994 ? A HIS 241 42 1 Y 1 A LEU 995 ? A LEU 242 43 1 Y 1 A ASN 996 ? A ASN 243 44 1 Y 1 A GLN 997 ? A GLN 244 45 1 Y 1 A LYS 998 ? A LYS 245 46 1 Y 1 A GLY 999 ? A GLY 246 47 1 Y 1 A LYS 1000 ? A LYS 247 48 1 Y 1 A ALA 1001 ? A ALA 248 49 1 Y 1 A LEU 1002 ? A LEU 249 50 1 Y 1 A PRO 1003 ? A PRO 250 51 1 Y 1 A LEU 1004 ? A LEU 251 52 1 Y 1 A SER 1005 ? A SER 252 53 1 Y 1 A SER 1006 ? A SER 253 54 1 Y 1 A ALA 1007 ? A ALA 254 55 1 Y 1 A GLU 1008 ? A GLU 255 56 1 Y 1 A LYS 1009 ? A LYS 256 57 1 Y 1 A ARG 1010 ? A ARG 257 58 1 Y 1 A LYS 1011 ? A LYS 258 59 1 Y 1 A ALA 1012 ? A ALA 259 60 1 Y 1 A LYS 1013 ? A LYS 260 61 1 Y 1 A TRP 1014 ? A TRP 261 62 1 Y 1 A GLU 1015 ? A GLU 262 63 1 Y 1 A SER 1016 ? A SER 263 64 1 Y 1 A LEU 1017 ? A LEU 264 65 1 Y 1 A GLN 1018 ? A GLN 265 66 1 Y 1 A ASN 1019 ? A ASN 266 67 1 Y 1 A LEU 1054 ? A LEU 301 68 1 Y 1 A LEU 1055 ? A LEU 302 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4NHA 'double helix' 4NHA 'a-form double helix' 4NHA 'mismatched base pair' 4NHA 'internal loop' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B G 1 1_555 B C 14 15_555 0.711 4.662 0.715 8.193 -5.670 -85.305 1 B_G1:C14_B B 1 ? B 14 ? ? ? 1 B C 2 1_555 B G 13 15_555 0.368 0.194 -0.098 6.484 -3.281 2.473 2 B_C2:G13_B B 2 ? B 13 ? 19 1 1 B G 3 1_555 B C 12 15_555 1.824 0.490 -0.197 -22.941 -17.919 -0.860 3 B_G3:C12_B B 3 ? B 12 ? ? ? 1 B U 4 1_555 B A 11 15_555 -0.272 0.132 0.874 0.678 -16.049 22.324 4 B_U4:A11_B B 4 ? B 11 ? ? 1 1 B U 5 1_555 B A 10 15_555 -0.505 -0.153 -0.374 19.007 -16.853 5.341 5 B_U5:A10_B B 5 ? B 10 ? 20 1 1 B G 6 1_555 B C 9 15_555 1.441 0.274 0.261 -5.270 -12.166 15.125 6 B_G6:C9_B B 6 ? B 9 ? ? 1 1 B G 1 1_555 B C 14 1_555 0.711 4.662 0.715 8.193 -5.670 -85.305 7 B_G1:C14_B B 1 ? B 14 ? ? ? 1 B C 2 1_555 B G 13 1_555 0.368 0.194 -0.098 6.484 -3.281 2.473 8 B_C2:G13_B B 2 ? B 13 ? 19 1 1 B G 3 1_555 B C 12 1_555 1.824 0.490 -0.197 -22.941 -17.919 -0.860 9 B_G3:C12_B B 3 ? B 12 ? ? ? 1 B U 4 1_555 B A 11 1_555 -0.272 0.132 0.874 0.678 -16.049 22.324 10 B_U4:A11_B B 4 ? B 11 ? ? 1 1 B U 5 1_555 B A 10 1_555 -0.505 -0.153 -0.374 19.007 -16.853 5.341 11 B_U5:A10_B B 5 ? B 10 ? 20 1 1 B G 6 1_555 B C 9 1_555 1.441 0.274 0.261 -5.270 -12.166 15.125 12 B_G6:C9_B B 6 ? B 9 ? ? 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B G 1 1_555 B C 14 15_555 B C 2 1_555 B G 13 15_555 -1.099 0.117 3.224 4.057 -8.264 -15.966 4.344 -1.122 3.091 27.022 13.265 -18.416 1 BB_G1C2:G13C14_BB B 1 ? B 14 ? B 2 ? B 13 ? 1 B C 2 1_555 B G 13 15_555 B G 3 1_555 B C 12 15_555 0.165 -1.869 3.610 7.046 20.650 40.306 -4.197 0.397 2.423 27.658 -9.438 45.615 2 BB_C2G3:C12G13_BB B 2 ? B 13 ? B 3 ? B 12 ? 1 B G 3 1_555 B C 12 15_555 B U 4 1_555 B A 11 15_555 1.100 -0.965 2.457 -6.602 3.955 19.739 -3.728 -4.834 1.774 11.011 18.379 21.172 3 BB_G3U4:A11C12_BB B 3 ? B 12 ? B 4 ? B 11 ? 1 B U 4 1_555 B A 11 15_555 B U 5 1_555 B A 10 15_555 -0.785 -0.355 2.693 6.321 8.199 31.114 -1.743 2.250 2.327 14.780 -11.396 32.751 4 BB_U4U5:A10A11_BB B 4 ? B 11 ? B 5 ? B 10 ? 1 B U 5 1_555 B A 10 15_555 B G 6 1_555 B C 9 15_555 0.840 -1.377 3.689 -2.258 11.650 41.486 -3.103 -1.382 3.160 16.055 3.112 43.078 5 BB_U5G6:C9A10_BB B 5 ? B 10 ? B 6 ? B 9 ? 1 B G 1 1_555 B C 14 1_555 B C 2 1_555 B G 13 1_555 -1.099 0.117 3.224 4.057 -8.264 -15.966 4.344 -1.122 3.091 27.022 13.265 -18.416 6 BB_G1C2:G13C14_BB B 1 ? B 14 ? B 2 ? B 13 ? 1 B C 2 1_555 B G 13 1_555 B G 3 1_555 B C 12 1_555 0.165 -1.869 3.610 7.046 20.650 40.306 -4.197 0.397 2.423 27.658 -9.438 45.615 7 BB_C2G3:C12G13_BB B 2 ? B 13 ? B 3 ? B 12 ? 1 B G 3 1_555 B C 12 1_555 B U 4 1_555 B A 11 1_555 1.100 -0.965 2.457 -6.602 3.955 19.739 -3.728 -4.834 1.774 11.011 18.379 21.172 8 BB_G3U4:A11C12_BB B 3 ? B 12 ? B 4 ? B 11 ? 1 B U 4 1_555 B A 11 1_555 B U 5 1_555 B A 10 1_555 -0.785 -0.355 2.693 6.321 8.199 31.114 -1.743 2.250 2.327 14.780 -11.396 32.751 9 BB_U4U5:A10A11_BB B 4 ? B 11 ? B 5 ? B 10 ? 1 B U 5 1_555 B A 10 1_555 B G 6 1_555 B C 9 1_555 0.840 -1.377 3.689 -2.258 11.650 41.486 -3.103 -1.382 3.160 16.055 3.112 43.078 10 BB_U5G6:C9A10_BB B 5 ? B 10 ? B 6 ? B 9 ? #