HEADER TRANSCRIPTION REGULATOR 06-NOV-13 4NIC TITLE CRYSTAL STRUCTURE OF KLEBSIELLA PNEUMONIAE RSTA BEF3-ACTIVATED N- TITLE 2 TERMINAL RECEIVER DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA-BINDING TRANSCRIPTIONAL REGULATOR RSTA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: N-TERMINAL RECEIVER DOMAIN (UNP RESIDUES 2-119); COMPND 5 SYNONYM: RSTA PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: KLEBSIELLA PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 573; SOURCE 4 GENE: RSTA, KPN2242_10390, KPR_2822; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS TWO-COMPONENT SYSTEM, RESPONSE REGULATOR, TRANSCRIPTION REGULATOR EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.LI,C.D.HSIAO REVDAT 3 28-FEB-24 4NIC 1 REMARK SEQADV LINK REVDAT 2 13-AUG-14 4NIC 1 JRNL REVDAT 1 16-JUL-14 4NIC 0 JRNL AUTH Y.C.LI,C.K.CHANG,C.F.CHANG,Y.H.CHENG,P.J.FANG,T.YU,S.C.CHEN, JRNL AUTH 2 Y.C.LI,C.D.HSIAO,T.H.HUANG JRNL TITL STRUCTURAL DYNAMICS OF THE TWO-COMPONENT RESPONSE REGULATOR JRNL TITL 2 RSTA IN RECOGNITION OF PROMOTER DNA ELEMENT. JRNL REF NUCLEIC ACIDS RES. V. 42 8777 2014 JRNL REFN ISSN 0305-1048 JRNL PMID 24990372 JRNL DOI 10.1093/NAR/GKU572 REMARK 2 REMARK 2 RESOLUTION. 3.18 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.18 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 26.60 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.2 REMARK 3 NUMBER OF REFLECTIONS : 15845 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.223 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1584 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 26.5994 - 7.0330 0.96 1412 157 0.1682 0.1735 REMARK 3 2 7.0330 - 5.5994 0.99 1357 151 0.2017 0.2337 REMARK 3 3 5.5994 - 4.8966 0.99 1334 148 0.1809 0.2116 REMARK 3 4 4.8966 - 4.4512 0.98 1300 144 0.1506 0.1801 REMARK 3 5 4.4512 - 4.1334 0.99 1302 145 0.1710 0.2272 REMARK 3 6 4.1334 - 3.8905 0.97 1288 143 0.1817 0.2285 REMARK 3 7 3.8905 - 3.6962 0.97 1263 141 0.1963 0.2420 REMARK 3 8 3.6962 - 3.5357 0.97 1253 139 0.2105 0.2317 REMARK 3 9 3.5357 - 3.3998 0.96 1254 139 0.2212 0.2633 REMARK 3 10 3.3998 - 3.2827 0.97 1268 141 0.2285 0.3601 REMARK 3 11 3.2827 - 3.1800 0.95 1230 136 0.2638 0.2941 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 3720 REMARK 3 ANGLE : 1.369 5040 REMARK 3 CHIRALITY : 0.089 600 REMARK 3 PLANARITY : 0.007 648 REMARK 3 DIHEDRAL : 18.767 1432 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NIC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-NOV-13. REMARK 100 THE DEPOSITION ID IS D_1000083239. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97891 REMARK 200 MONOCHROMATOR : LN2-COOLED, FIXED-EXIT DOUBLE REMARK 200 CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15850 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.0 REMARK 200 DATA REDUNDANCY : 6.000 REMARK 200 R MERGE (I) : 0.11600 REMARK 200 R SYM (I) : 0.11600 REMARK 200 FOR THE DATA SET : 15.6890 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.21 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 6.60 REMARK 200 R MERGE FOR SHELL (I) : 0.35400 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM BIS-TRIS, 25% PEG3350, PH 6.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 299K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+1/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 162.45667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 81.22833 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 121.84250 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 40.61417 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 203.07083 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 162.45667 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 81.22833 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 40.61417 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 121.84250 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 203.07083 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 10930 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2040 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 ALA A -1 REMARK 465 MET A 0 REMARK 465 GLY A 1 REMARK 465 HIS A 119 REMARK 465 MET B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 ALA B -1 REMARK 465 MET B 0 REMARK 465 GLY B 1 REMARK 465 HIS B 119 REMARK 465 MET C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 ALA C -1 REMARK 465 MET C 0 REMARK 465 GLY C 1 REMARK 465 HIS C 119 REMARK 465 MET D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 ALA D -1 REMARK 465 MET D 0 REMARK 465 GLY D 1 REMARK 465 HIS D 119 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 38 -48.54 92.67 REMARK 500 ARG A 117 -50.12 -141.77 REMARK 500 ASP B 9 -77.20 -65.80 REMARK 500 ASP B 10 107.67 -35.81 REMARK 500 GLU B 38 -39.98 88.39 REMARK 500 ILE B 53 -62.97 -101.33 REMARK 500 GLN B 72 52.94 -116.52 REMARK 500 LEU B 78 107.77 -168.18 REMARK 500 LEU B 116 39.41 -73.17 REMARK 500 ALA C 37 170.17 -56.89 REMARK 500 GLU C 38 -53.36 83.87 REMARK 500 ILE C 53 -88.47 72.29 REMARK 500 MET C 54 92.85 -68.11 REMARK 500 GLU D 38 -68.51 97.69 REMARK 500 ILE D 53 -61.66 -93.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 9 OD1 REMARK 620 2 ASP A 9 OD2 54.0 REMARK 620 3 ASP A 52 OD2 66.0 119.5 REMARK 620 4 MET A 54 O 66.7 77.3 73.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 9 OD2 REMARK 620 2 ASP B 9 OD1 52.6 REMARK 620 3 ASP B 52 OD2 109.9 69.4 REMARK 620 4 MET B 54 O 90.2 59.4 91.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG C 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP C 9 OD1 REMARK 620 2 ASP C 9 OD2 49.1 REMARK 620 3 ASP C 52 OD2 67.8 104.4 REMARK 620 4 MET C 54 O 78.5 64.0 67.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG D 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP D 9 OD1 REMARK 620 2 ASP D 9 OD2 50.8 REMARK 620 3 ASP D 52 OD2 70.6 111.2 REMARK 620 4 MET D 54 O 86.2 69.4 74.7 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF B 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF C 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG D 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE BEF D 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NHJ RELATED DB: PDB DBREF 4NIC A 2 119 UNP G0GNT0 G0GNT0_KLEPN 2 119 DBREF 4NIC B 2 119 UNP G0GNT0 G0GNT0_KLEPN 2 119 DBREF 4NIC C 2 119 UNP G0GNT0 G0GNT0_KLEPN 2 119 DBREF 4NIC D 2 119 UNP G0GNT0 G0GNT0_KLEPN 2 119 SEQADV 4NIC MET A -8 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -7 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -6 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -5 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -4 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -3 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS A -2 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC ALA A -1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET A 0 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC GLY A 1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET B -8 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -7 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -6 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -5 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -4 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -3 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS B -2 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC ALA B -1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET B 0 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC GLY B 1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET C -8 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -7 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -6 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -5 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -4 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -3 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS C -2 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC ALA C -1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET C 0 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC GLY C 1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET D -8 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -7 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -6 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -5 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -4 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -3 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC HIS D -2 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC ALA D -1 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC MET D 0 UNP G0GNT0 EXPRESSION TAG SEQADV 4NIC GLY D 1 UNP G0GNT0 EXPRESSION TAG SEQRES 1 A 128 MET HIS HIS HIS HIS HIS HIS ALA MET GLY ASN LYS ILE SEQRES 2 A 128 VAL PHE VAL GLU ASP ASP PRO GLU VAL GLY THR LEU ILE SEQRES 3 A 128 ALA ALA TYR LEU GLY LYS HIS ASP MET ASP VAL VAL VAL SEQRES 4 A 128 GLU PRO ARG GLY ASP ARG ALA GLU GLU VAL ILE ALA ARG SEQRES 5 A 128 GLU LYS PRO ASP LEU VAL LEU LEU ASP ILE MET LEU PRO SEQRES 6 A 128 GLY LYS ASP GLY MET THR LEU CYS ARG ASP LEU ARG GLY SEQRES 7 A 128 GLN TRP GLN GLY PRO ILE VAL LEU LEU THR SER LEU ASP SEQRES 8 A 128 SER ASP MET ASN HIS ILE LEU SER LEU GLU MET GLY ALA SEQRES 9 A 128 SER ASP TYR ILE LEU LYS THR THR PRO PRO ALA VAL LEU SEQRES 10 A 128 LEU ALA ARG LEU ARG LEU HIS LEU ARG GLN HIS SEQRES 1 B 128 MET HIS HIS HIS HIS HIS HIS ALA MET GLY ASN LYS ILE SEQRES 2 B 128 VAL PHE VAL GLU ASP ASP PRO GLU VAL GLY THR LEU ILE SEQRES 3 B 128 ALA ALA TYR LEU GLY LYS HIS ASP MET ASP VAL VAL VAL SEQRES 4 B 128 GLU PRO ARG GLY ASP ARG ALA GLU GLU VAL ILE ALA ARG SEQRES 5 B 128 GLU LYS PRO ASP LEU VAL LEU LEU ASP ILE MET LEU PRO SEQRES 6 B 128 GLY LYS ASP GLY MET THR LEU CYS ARG ASP LEU ARG GLY SEQRES 7 B 128 GLN TRP GLN GLY PRO ILE VAL LEU LEU THR SER LEU ASP SEQRES 8 B 128 SER ASP MET ASN HIS ILE LEU SER LEU GLU MET GLY ALA SEQRES 9 B 128 SER ASP TYR ILE LEU LYS THR THR PRO PRO ALA VAL LEU SEQRES 10 B 128 LEU ALA ARG LEU ARG LEU HIS LEU ARG GLN HIS SEQRES 1 C 128 MET HIS HIS HIS HIS HIS HIS ALA MET GLY ASN LYS ILE SEQRES 2 C 128 VAL PHE VAL GLU ASP ASP PRO GLU VAL GLY THR LEU ILE SEQRES 3 C 128 ALA ALA TYR LEU GLY LYS HIS ASP MET ASP VAL VAL VAL SEQRES 4 C 128 GLU PRO ARG GLY ASP ARG ALA GLU GLU VAL ILE ALA ARG SEQRES 5 C 128 GLU LYS PRO ASP LEU VAL LEU LEU ASP ILE MET LEU PRO SEQRES 6 C 128 GLY LYS ASP GLY MET THR LEU CYS ARG ASP LEU ARG GLY SEQRES 7 C 128 GLN TRP GLN GLY PRO ILE VAL LEU LEU THR SER LEU ASP SEQRES 8 C 128 SER ASP MET ASN HIS ILE LEU SER LEU GLU MET GLY ALA SEQRES 9 C 128 SER ASP TYR ILE LEU LYS THR THR PRO PRO ALA VAL LEU SEQRES 10 C 128 LEU ALA ARG LEU ARG LEU HIS LEU ARG GLN HIS SEQRES 1 D 128 MET HIS HIS HIS HIS HIS HIS ALA MET GLY ASN LYS ILE SEQRES 2 D 128 VAL PHE VAL GLU ASP ASP PRO GLU VAL GLY THR LEU ILE SEQRES 3 D 128 ALA ALA TYR LEU GLY LYS HIS ASP MET ASP VAL VAL VAL SEQRES 4 D 128 GLU PRO ARG GLY ASP ARG ALA GLU GLU VAL ILE ALA ARG SEQRES 5 D 128 GLU LYS PRO ASP LEU VAL LEU LEU ASP ILE MET LEU PRO SEQRES 6 D 128 GLY LYS ASP GLY MET THR LEU CYS ARG ASP LEU ARG GLY SEQRES 7 D 128 GLN TRP GLN GLY PRO ILE VAL LEU LEU THR SER LEU ASP SEQRES 8 D 128 SER ASP MET ASN HIS ILE LEU SER LEU GLU MET GLY ALA SEQRES 9 D 128 SER ASP TYR ILE LEU LYS THR THR PRO PRO ALA VAL LEU SEQRES 10 D 128 LEU ALA ARG LEU ARG LEU HIS LEU ARG GLN HIS HET MG A 201 1 HET BEF A 202 4 HET MG B 201 1 HET BEF B 202 4 HET MG C 201 1 HET BEF C 202 4 HET MG D 201 1 HET BEF D 202 4 HETNAM MG MAGNESIUM ION HETNAM BEF BERYLLIUM TRIFLUORIDE ION FORMUL 5 MG 4(MG 2+) FORMUL 6 BEF 4(BE F3 1-) FORMUL 13 HOH *38(H2 O) HELIX 1 1 ASP A 10 HIS A 24 1 15 HELIX 2 2 GLU A 38 LYS A 45 1 8 HELIX 3 3 ASP A 59 TRP A 71 1 13 HELIX 4 4 SER A 83 MET A 93 1 11 HELIX 5 5 PRO A 104 LEU A 116 1 13 HELIX 6 6 ASP B 10 HIS B 24 1 15 HELIX 7 7 GLU B 39 LYS B 45 1 7 HELIX 8 8 ASP B 59 TRP B 71 1 13 HELIX 9 9 SER B 83 GLY B 94 1 12 HELIX 10 10 PRO B 104 LEU B 116 1 13 HELIX 11 11 ASP C 10 HIS C 24 1 15 HELIX 12 12 GLU C 38 LYS C 45 1 8 HELIX 13 13 ASP C 59 TRP C 71 1 13 HELIX 14 14 SER C 83 MET C 93 1 11 HELIX 15 15 PRO C 104 ARG C 117 1 14 HELIX 16 16 ASP D 10 LYS D 23 1 14 HELIX 17 17 GLU D 38 LYS D 45 1 8 HELIX 18 18 ASP D 59 TRP D 71 1 13 HELIX 19 19 SER D 83 GLU D 92 1 10 HELIX 20 20 PRO D 104 LEU D 116 1 13 SHEET 1 A 5 ASP A 27 GLU A 31 0 SHEET 2 A 5 LYS A 3 VAL A 7 1 N PHE A 6 O VAL A 29 SHEET 3 A 5 LEU A 48 LEU A 51 1 O LEU A 50 N VAL A 5 SHEET 4 A 5 ILE A 75 THR A 79 1 O LEU A 78 N LEU A 51 SHEET 5 A 5 ASP A 97 LEU A 100 1 O ILE A 99 N LEU A 77 SHEET 1 B 5 ASP B 27 GLU B 31 0 SHEET 2 B 5 LYS B 3 VAL B 7 1 N ILE B 4 O ASP B 27 SHEET 3 B 5 LEU B 48 LEU B 51 1 O LEU B 50 N VAL B 5 SHEET 4 B 5 ILE B 75 THR B 79 1 O VAL B 76 N VAL B 49 SHEET 5 B 5 ASP B 97 LEU B 100 1 O ASP B 97 N LEU B 77 SHEET 1 C 5 ASP C 27 VAL C 29 0 SHEET 2 C 5 LYS C 3 PHE C 6 1 N ILE C 4 O VAL C 29 SHEET 3 C 5 LEU C 48 LEU C 51 1 O LEU C 50 N VAL C 5 SHEET 4 C 5 ILE C 75 THR C 79 1 O LEU C 78 N LEU C 51 SHEET 5 C 5 ASP C 97 LEU C 100 1 O ILE C 99 N LEU C 77 SHEET 1 D 5 ASP D 27 GLU D 31 0 SHEET 2 D 5 LYS D 3 VAL D 7 1 N ILE D 4 O ASP D 27 SHEET 3 D 5 LEU D 48 LEU D 51 1 O LEU D 50 N VAL D 5 SHEET 4 D 5 ILE D 75 THR D 79 1 O LEU D 78 N LEU D 51 SHEET 5 D 5 ASP D 97 LEU D 100 1 O ILE D 99 N LEU D 77 LINK OD1 ASP A 9 MG MG A 201 1555 1555 2.37 LINK OD2 ASP A 9 MG MG A 201 1555 1555 2.45 LINK OD2 ASP A 52 MG MG A 201 1555 1555 2.44 LINK O MET A 54 MG MG A 201 1555 1555 2.48 LINK OD2 ASP B 9 MG MG B 201 1555 1555 2.28 LINK OD1 ASP B 9 MG MG B 201 1555 1555 2.63 LINK OD2 ASP B 52 MG MG B 201 1555 1555 2.45 LINK O MET B 54 MG MG B 201 1555 1555 2.43 LINK OD1 ASP C 9 MG MG C 201 1555 1555 2.16 LINK OD2 ASP C 9 MG MG C 201 1555 1555 2.87 LINK OD2 ASP C 52 MG MG C 201 1555 1555 2.73 LINK O MET C 54 MG MG C 201 1555 1555 2.52 LINK OD1 ASP D 9 MG MG D 201 1555 1555 2.01 LINK OD2 ASP D 9 MG MG D 201 1555 1555 2.82 LINK OD2 ASP D 52 MG MG D 201 1555 1555 2.51 LINK O MET D 54 MG MG D 201 1555 1555 2.41 SITE 1 AC1 6 GLU A 8 ASP A 9 ASP A 52 MET A 54 SITE 2 AC1 6 BEF A 202 ARG C 65 SITE 1 AC2 8 ASP A 52 ILE A 53 MET A 54 THR A 79 SITE 2 AC2 8 SER A 80 LYS A 101 MG A 201 ARG C 65 SITE 1 AC3 4 ASP B 9 ASP B 52 MET B 54 BEF B 202 SITE 1 AC4 7 ASP B 52 ILE B 53 MET B 54 THR B 79 SITE 2 AC4 7 SER B 80 LYS B 101 MG B 201 SITE 1 AC5 4 ASP C 9 ASP C 52 MET C 54 BEF C 202 SITE 1 AC6 7 ASP C 9 ASP C 52 MET C 54 THR C 79 SITE 2 AC6 7 SER C 80 LYS C 101 MG C 201 SITE 1 AC7 4 ASP D 9 ASP D 52 MET D 54 BEF D 202 SITE 1 AC8 8 ASP D 9 ASP D 52 ILE D 53 MET D 54 SITE 2 AC8 8 THR D 79 SER D 80 LYS D 101 MG D 201 CRYST1 113.475 113.475 243.685 90.00 90.00 120.00 P 65 2 2 48 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008813 0.005088 0.000000 0.00000 SCALE2 0.000000 0.010176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004104 0.00000