HEADER TRANSFERASE/TRANSFERASE INHIBITOR 06-NOV-13 4NIR TITLE CRYSTAL STRUCTURE OF B. ANTHRACIS DHPS WITH COMPOUND 6: 3-[6- TITLE 2 (TRIFLUOROMETHYL)-1H-BENZIMIDAZOL-2-YL]PROPAN-1-OL COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIHYDROPTEROATE SYNTHASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 5-280; COMPND 5 EC: 2.5.1.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_COMMON: ANTHRAX, ANTHRAX BACTERIUM; SOURCE 4 ORGANISM_TAXID: 1392; SOURCE 5 STRAIN: A2012; SOURCE 6 GENE: FOLP, BAS0071, BA_0071, GBAA_0071; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS TIM BARREL, TIM BAREL, TRANSFERASE, PTERIN, PABA, TRANSFERASE- KEYWDS 2 TRANSFERASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR D.I.HAMMOUDEH,S.W.WHITE REVDAT 4 20-SEP-23 4NIR 1 REMARK SEQADV REVDAT 3 22-NOV-17 4NIR 1 REMARK REVDAT 2 06-AUG-14 4NIR 1 JRNL REVDAT 1 14-MAY-14 4NIR 0 JRNL AUTH D.I.HAMMOUDEH,M.DATE,M.K.YUN,W.ZHANG,V.A.BOYD, JRNL AUTH 2 A.VIACAVA FOLLIS,E.GRIFFITH,R.E.LEE,D.BASHFORD,S.W.WHITE JRNL TITL IDENTIFICATION AND CHARACTERIZATION OF AN ALLOSTERIC JRNL TITL 2 INHIBITORY SITE ON DIHYDROPTEROATE SYNTHASE. JRNL REF ACS CHEM.BIOL. V. 9 1294 2014 JRNL REFN ISSN 1554-8929 JRNL PMID 24650357 JRNL DOI 10.1021/CB500038G REMARK 2 REMARK 2 RESOLUTION. 1.77 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.7.3_928 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.77 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 32.19 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.330 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.0 REMARK 3 NUMBER OF REFLECTIONS : 70904 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.192 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 3575 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 32.1940 - 5.2436 0.89 2727 114 0.2161 0.2276 REMARK 3 2 5.2436 - 4.1649 0.96 2698 153 0.1550 0.1848 REMARK 3 3 4.1649 - 3.6392 0.96 2653 141 0.1584 0.1879 REMARK 3 4 3.6392 - 3.3068 0.96 2642 141 0.1840 0.2042 REMARK 3 5 3.3068 - 3.0700 0.98 2658 161 0.2023 0.2186 REMARK 3 6 3.0700 - 2.8891 0.99 2678 133 0.2108 0.2307 REMARK 3 7 2.8891 - 2.7445 0.99 2704 125 0.2132 0.2320 REMARK 3 8 2.7445 - 2.6251 0.99 2687 132 0.2125 0.2450 REMARK 3 9 2.6251 - 2.5241 0.99 2641 148 0.2078 0.2428 REMARK 3 10 2.5241 - 2.4370 0.99 2667 140 0.1979 0.2300 REMARK 3 11 2.4370 - 2.3609 0.99 2639 134 0.1806 0.2220 REMARK 3 12 2.3609 - 2.2934 0.99 2638 150 0.1803 0.2099 REMARK 3 13 2.2934 - 2.2330 0.98 2615 126 0.1791 0.2245 REMARK 3 14 2.2330 - 2.1786 0.98 2596 161 0.1767 0.2141 REMARK 3 15 2.1786 - 2.1290 0.98 2607 155 0.1837 0.2134 REMARK 3 16 2.1290 - 2.0837 0.98 2605 156 0.1797 0.2148 REMARK 3 17 2.0837 - 2.0421 0.98 2610 137 0.1822 0.2250 REMARK 3 18 2.0421 - 2.0035 0.98 2582 136 0.1809 0.2122 REMARK 3 19 2.0035 - 1.9678 0.98 2606 137 0.1861 0.2260 REMARK 3 20 1.9678 - 1.9344 0.98 2580 151 0.1893 0.2504 REMARK 3 21 1.9344 - 1.9032 0.98 2612 124 0.1974 0.2371 REMARK 3 22 1.9032 - 1.8739 0.97 2584 150 0.2217 0.2801 REMARK 3 23 1.8739 - 1.8464 0.97 2550 122 0.2329 0.2655 REMARK 3 24 1.8464 - 1.8204 0.97 2588 126 0.2588 0.2633 REMARK 3 25 1.8204 - 1.7958 0.89 2354 116 0.3056 0.3494 REMARK 3 26 1.7958 - 1.7725 0.69 1808 106 0.3536 0.3440 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.10 REMARK 3 SHRINKAGE RADIUS : 0.86 REMARK 3 K_SOL : 0.40 REMARK 3 B_SOL : 45.57 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.220 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.630 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.73 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.19 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.98750 REMARK 3 B22 (A**2) : 2.98750 REMARK 3 B33 (A**2) : -5.97490 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 4363 REMARK 3 ANGLE : 1.062 5904 REMARK 3 CHIRALITY : 0.076 651 REMARK 3 PLANARITY : 0.004 754 REMARK 3 DIHEDRAL : 13.687 1662 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' REMARK 3 ORIGIN FOR THE GROUP (A): -18.4353 23.7286 3.7644 REMARK 3 T TENSOR REMARK 3 T11: 0.1686 T22: 0.0669 REMARK 3 T33: 0.1314 T12: 0.0147 REMARK 3 T13: 0.0160 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 0.7768 L22: 1.4036 REMARK 3 L33: 1.3070 L12: -0.0273 REMARK 3 L13: 0.0882 L23: -0.3688 REMARK 3 S TENSOR REMARK 3 S11: -0.0307 S12: -0.0777 S13: -0.0089 REMARK 3 S21: 0.1094 S22: 0.0467 S23: -0.0024 REMARK 3 S31: -0.0513 S32: -0.0245 S33: -0.0136 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' REMARK 3 ORIGIN FOR THE GROUP (A): -30.4150 4.8693 51.0651 REMARK 3 T TENSOR REMARK 3 T11: 0.0779 T22: 0.1312 REMARK 3 T33: 0.0761 T12: 0.0002 REMARK 3 T13: 0.0092 T23: 0.0233 REMARK 3 L TENSOR REMARK 3 L11: 1.5440 L22: 1.1419 REMARK 3 L33: 1.2221 L12: 0.3975 REMARK 3 L13: 0.0197 L23: -0.3225 REMARK 3 S TENSOR REMARK 3 S11: -0.0263 S12: 0.1796 S13: 0.0259 REMARK 3 S21: -0.0737 S22: -0.0333 S23: -0.0510 REMARK 3 S31: -0.0261 S32: 0.1196 S33: 0.0517 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4NIR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-13. REMARK 100 THE DEPOSITION ID IS D_1000083254. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : ROSENBAUM-ROCK DOUBLE-CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70993 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.770 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.8 REMARK 200 DATA REDUNDANCY : 11.20 REMARK 200 R MERGE (I) : 0.08900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.77 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.83 REMARK 200 COMPLETENESS FOR SHELL (%) : 71.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.20 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.59700 REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 1TWS REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.80 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: LITHIUM SULFATE, BIS-TRIS PROPANE, PH REMARK 280 9.0, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 62 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z REMARK 290 5555 Y,-X+Y,Z+2/3 REMARK 290 6555 X-Y,X,Z+1/3 REMARK 290 7555 Y,X,-Z+2/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+1/3 REMARK 290 10555 -Y,-X,-Z+2/3 REMARK 290 11555 -X+Y,Y,-Z REMARK 290 12555 X,X-Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 175.61000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 87.80500 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 175.61000 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 87.80500 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 175.61000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 87.80500 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 175.61000 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 87.80500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2450 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21620 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -27.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -49.16900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 85.16321 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21400 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -98.33800 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7240 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 40710 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -49.16900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 85.16321 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 3 -0.500000 -0.866025 0.000000 -49.16900 REMARK 350 BIOMT2 3 0.866025 -0.500000 0.000000 85.16321 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 -87.80500 REMARK 350 BIOMT1 4 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 4 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 -87.80500 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 C07 6DH B 306 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 GLY A 275 REMARK 465 VAL A 276 REMARK 465 LYS A 277 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 ASP B 31 REMARK 465 SER B 32 REMARK 465 PHE B 33 REMARK 465 THR B 67 REMARK 465 ARG B 68 REMARK 465 PRO B 69 REMARK 465 GLY B 70 REMARK 465 PHE B 71 REMARK 465 ALA B 72 REMARK 465 LYS B 73 REMARK 465 MET B 157 REMARK 465 VAL B 276 REMARK 465 LYS B 277 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 VAL B 74 CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR B 29 108.73 10.24 REMARK 500 GLU B 65 -86.68 -127.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6DH A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6DH A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 6DH B 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4NHV RELATED DB: PDB REMARK 900 RELATED ID: 4NIR RELATED DB: PDB REMARK 900 RELATED ID: 4NL1 RELATED DB: PDB DBREF 4NIR A 2 277 UNP Q81VW8 Q81VW8_BACAN 5 280 DBREF 4NIR B 2 277 UNP Q81VW8 Q81VW8_BACAN 5 280 SEQADV 4NIR MET A -19 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY A -18 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER A -17 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER A -16 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -15 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -14 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -13 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -12 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -11 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A -10 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER A -9 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER A -8 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY A -7 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR LEU A -6 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR VAL A -5 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR PRO A -4 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR ARG A -3 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY A -2 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER A -1 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS A 0 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR MET A 1 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR MET B -19 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY B -18 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER B -17 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER B -16 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -15 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -14 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -13 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -12 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -11 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B -10 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER B -9 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER B -8 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY B -7 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR LEU B -6 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR VAL B -5 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR PRO B -4 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR ARG B -3 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR GLY B -2 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR SER B -1 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR HIS B 0 UNP Q81VW8 EXPRESSION TAG SEQADV 4NIR MET B 1 UNP Q81VW8 EXPRESSION TAG SEQRES 1 A 297 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 297 LEU VAL PRO ARG GLY SER HIS MET LYS TRP ASP TYR ASP SEQRES 3 A 297 LEU ARG CYS GLY GLU TYR THR LEU ASN LEU ASN GLU LYS SEQRES 4 A 297 THR LEU ILE MET GLY ILE LEU ASN VAL THR PRO ASP SER SEQRES 5 A 297 PHE SER ASP GLY GLY SER TYR ASN GLU VAL ASP ALA ALA SEQRES 6 A 297 VAL ARG HIS ALA LYS GLU MET ARG ASP GLU GLY ALA HIS SEQRES 7 A 297 ILE ILE ASP ILE GLY GLY GLU SER THR ARG PRO GLY PHE SEQRES 8 A 297 ALA LYS VAL SER VAL GLU GLU GLU ILE LYS ARG VAL VAL SEQRES 9 A 297 PRO MET ILE GLN ALA VAL SER LYS GLU VAL LYS LEU PRO SEQRES 10 A 297 ILE SER ILE ASP THR TYR LYS ALA GLU VAL ALA LYS GLN SEQRES 11 A 297 ALA ILE GLU ALA GLY ALA HIS ILE ILE ASN ASP ILE TRP SEQRES 12 A 297 GLY ALA LYS ALA GLU PRO LYS ILE ALA GLU VAL ALA ALA SEQRES 13 A 297 HIS TYR ASP VAL PRO ILE ILE LEU MET HIS ASN ARG ASP SEQRES 14 A 297 ASN MET ASN TYR ARG ASN LEU MET ALA ASP MET ILE ALA SEQRES 15 A 297 ASP LEU TYR ASP SER ILE LYS ILE ALA LYS ASP ALA GLY SEQRES 16 A 297 VAL ARG ASP GLU ASN ILE ILE LEU ASP PRO GLY ILE GLY SEQRES 17 A 297 PHE ALA LYS THR PRO GLU GLN ASN LEU GLU ALA MET ARG SEQRES 18 A 297 ASN LEU GLU GLN LEU ASN VAL LEU GLY TYR PRO VAL LEU SEQRES 19 A 297 LEU GLY THR SER ARG LYS SER PHE ILE GLY HIS VAL LEU SEQRES 20 A 297 ASP LEU PRO VAL GLU GLU ARG LEU GLU GLY THR GLY ALA SEQRES 21 A 297 THR VAL CYS LEU GLY ILE GLU LYS GLY CYS GLU PHE VAL SEQRES 22 A 297 ARG VAL HIS ASP VAL LYS GLU MET SER ARG MET ALA LYS SEQRES 23 A 297 MET MET ASP ALA MET ILE GLY LYS GLY VAL LYS SEQRES 1 B 297 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 297 LEU VAL PRO ARG GLY SER HIS MET LYS TRP ASP TYR ASP SEQRES 3 B 297 LEU ARG CYS GLY GLU TYR THR LEU ASN LEU ASN GLU LYS SEQRES 4 B 297 THR LEU ILE MET GLY ILE LEU ASN VAL THR PRO ASP SER SEQRES 5 B 297 PHE SER ASP GLY GLY SER TYR ASN GLU VAL ASP ALA ALA SEQRES 6 B 297 VAL ARG HIS ALA LYS GLU MET ARG ASP GLU GLY ALA HIS SEQRES 7 B 297 ILE ILE ASP ILE GLY GLY GLU SER THR ARG PRO GLY PHE SEQRES 8 B 297 ALA LYS VAL SER VAL GLU GLU GLU ILE LYS ARG VAL VAL SEQRES 9 B 297 PRO MET ILE GLN ALA VAL SER LYS GLU VAL LYS LEU PRO SEQRES 10 B 297 ILE SER ILE ASP THR TYR LYS ALA GLU VAL ALA LYS GLN SEQRES 11 B 297 ALA ILE GLU ALA GLY ALA HIS ILE ILE ASN ASP ILE TRP SEQRES 12 B 297 GLY ALA LYS ALA GLU PRO LYS ILE ALA GLU VAL ALA ALA SEQRES 13 B 297 HIS TYR ASP VAL PRO ILE ILE LEU MET HIS ASN ARG ASP SEQRES 14 B 297 ASN MET ASN TYR ARG ASN LEU MET ALA ASP MET ILE ALA SEQRES 15 B 297 ASP LEU TYR ASP SER ILE LYS ILE ALA LYS ASP ALA GLY SEQRES 16 B 297 VAL ARG ASP GLU ASN ILE ILE LEU ASP PRO GLY ILE GLY SEQRES 17 B 297 PHE ALA LYS THR PRO GLU GLN ASN LEU GLU ALA MET ARG SEQRES 18 B 297 ASN LEU GLU GLN LEU ASN VAL LEU GLY TYR PRO VAL LEU SEQRES 19 B 297 LEU GLY THR SER ARG LYS SER PHE ILE GLY HIS VAL LEU SEQRES 20 B 297 ASP LEU PRO VAL GLU GLU ARG LEU GLU GLY THR GLY ALA SEQRES 21 B 297 THR VAL CYS LEU GLY ILE GLU LYS GLY CYS GLU PHE VAL SEQRES 22 B 297 ARG VAL HIS ASP VAL LYS GLU MET SER ARG MET ALA LYS SEQRES 23 B 297 MET MET ASP ALA MET ILE GLY LYS GLY VAL LYS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET SO4 A 306 5 HET 6DH A 307 17 HET 6DH A 308 17 HET SO4 B 301 5 HET SO4 B 302 5 HET SO4 B 303 5 HET SO4 B 304 5 HET SO4 B 305 5 HET 6DH B 306 17 HETNAM SO4 SULFATE ION HETNAM 6DH 3-[6-(TRIFLUOROMETHYL)-1H-BENZIMIDAZOL-2-YL]PROPAN-1-OL FORMUL 3 SO4 11(O4 S 2-) FORMUL 9 6DH 3(C11 H11 F3 N2 O) FORMUL 17 HOH *313(H2 O) HELIX 1 1 SER A 38 GLY A 56 1 19 HELIX 2 2 SER A 75 VAL A 94 1 20 HELIX 3 3 LYS A 104 GLY A 115 1 12 HELIX 4 4 PRO A 129 ASP A 139 1 11 HELIX 5 5 ASN A 155 GLY A 175 1 21 HELIX 6 6 ARG A 177 GLU A 179 5 3 HELIX 7 7 THR A 192 ASN A 202 1 11 HELIX 8 8 LEU A 203 GLY A 210 5 8 HELIX 9 9 LYS A 220 ASP A 228 1 9 HELIX 10 10 PRO A 230 GLU A 233 5 4 HELIX 11 11 ARG A 234 LYS A 248 1 15 HELIX 12 12 ASP A 257 GLY A 273 1 17 HELIX 13 13 SER B 38 GLU B 55 1 18 HELIX 14 14 SER B 75 VAL B 94 1 20 HELIX 15 15 LYS B 104 GLY B 115 1 12 HELIX 16 16 PRO B 129 ASP B 139 1 11 HELIX 17 17 ASN B 155 LEU B 156 5 2 HELIX 18 18 ALA B 158 ALA B 158 5 1 HELIX 19 19 ASP B 159 ALA B 174 1 16 HELIX 20 20 ARG B 177 GLU B 179 5 3 HELIX 21 21 THR B 192 ASN B 202 1 11 HELIX 22 22 LEU B 203 GLY B 210 5 8 HELIX 23 23 LYS B 220 ASP B 228 1 9 HELIX 24 24 PRO B 230 GLU B 233 5 4 HELIX 25 25 ARG B 234 LYS B 248 1 15 HELIX 26 26 ASP B 257 GLY B 273 1 17 SHEET 1 A 2 LEU A 7 CYS A 9 0 SHEET 2 A 2 TYR A 12 LEU A 14 -1 O LEU A 14 N LEU A 7 SHEET 1 B 8 ILE A 181 ASP A 184 0 SHEET 2 B 8 ILE A 142 MET A 145 1 N LEU A 144 O ILE A 182 SHEET 3 B 8 ILE A 118 ASP A 121 1 N ILE A 119 O ILE A 143 SHEET 4 B 8 ILE A 98 ASP A 101 1 N ILE A 100 O ASN A 120 SHEET 5 B 8 ILE A 59 GLY A 63 1 N ILE A 62 O SER A 99 SHEET 6 B 8 LEU A 21 ASN A 27 1 N GLY A 24 O ILE A 59 SHEET 7 B 8 PHE A 252 VAL A 255 1 O VAL A 253 N MET A 23 SHEET 8 B 8 LEU A 214 LEU A 215 1 N LEU A 215 O ARG A 254 SHEET 1 C 2 LEU B 7 CYS B 9 0 SHEET 2 C 2 TYR B 12 LEU B 14 -1 O LEU B 14 N LEU B 7 SHEET 1 D 8 ILE B 181 ASP B 184 0 SHEET 2 D 8 ILE B 142 MET B 145 1 N LEU B 144 O ILE B 182 SHEET 3 D 8 ILE B 118 ASP B 121 1 N ILE B 119 O ILE B 143 SHEET 4 D 8 ILE B 98 ASP B 101 1 N ILE B 100 O ASN B 120 SHEET 5 D 8 ILE B 59 GLY B 63 1 N ILE B 62 O SER B 99 SHEET 6 D 8 LEU B 21 ILE B 25 1 N GLY B 24 O ASP B 61 SHEET 7 D 8 PHE B 252 VAL B 255 1 O VAL B 253 N MET B 23 SHEET 8 D 8 LEU B 214 LEU B 215 1 N LEU B 215 O ARG B 254 CISPEP 1 ARG A 68 PRO A 69 0 3.09 CISPEP 2 MET B 1 LYS B 2 0 -4.16 SITE 1 AC1 7 ILE A 25 ASN A 27 ARG A 68 PRO A 69 SITE 2 AC1 7 ARG A 254 HIS A 256 HOH A 408 SITE 1 AC2 3 LYS A 50 ARG A 53 HOH A 463 SITE 1 AC3 2 SER A 221 ARG A 234 SITE 1 AC4 1 ARG A 219 SITE 1 AC5 4 SER A 75 VAL A 76 GLU A 77 HOH A 566 SITE 1 AC6 4 GLU A 133 VAL A 134 HIS A 137 TYR A 138 SITE 1 AC7 6 TRP A 123 ALA A 127 ARG A 148 ASP A 149 SITE 2 AC7 6 ASN A 150 HOH A 569 SITE 1 AC8 5 LEU A 235 GLU A 236 GLU A 260 MET A 264 SITE 2 AC8 5 HOH A 563 SITE 1 AC9 4 SER B 66 ARG B 254 HIS B 256 HOH B 455 SITE 1 BC1 2 LYS B 50 ARG B 53 SITE 1 BC2 3 SER B 221 ARG B 234 HOH B 459 SITE 1 BC3 1 ARG B 219 SITE 1 BC4 2 ARG B 263 HOH B 478 SITE 1 BC5 4 GLU B 236 GLU B 260 MET B 261 HOH B 527 CRYST1 98.338 98.338 263.415 90.00 90.00 120.00 P 62 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010169 0.005871 0.000000 0.00000 SCALE2 0.000000 0.011742 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003796 0.00000